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Matrix 10866 of Study 12101
Citation title: "A molecular phylogeny of thermophilic fungi".
Study name: "A molecular phylogeny of thermophilic fungi".
This study is part of submission 12101
(Status: Published).
Matrices
Title: mcm7, rpb1, rpb2 combined alignment
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Acremonium alcalophilum | (none) | MALRRYKAPVQYDAQQKAFDLFLQDFKYQR |
| Agaricus bisporus | (none) | ------------------------------ |
| Ajellomyces capsulatus | (none) | MALLQYRAPVKYAVQQEIFKDFLQTFKYMQ |
| Allomyces macrogynus | (none) | MADVAAIFNINFDKEKEQIETFLKNYKYVE |
| Alternaria brassicicola | (none) | MALLTTSAPVNYDEQEAAFVDFLKHYKYMD |
| Amorphotheca resinae | (none) | MALLQFRAPVSYEDHQAAFEEFLQTFKYVE |
| Arabidopsis thaliana | (none) | MK------DHDFDGDKGLAKGFLENFKYME |
| Aspergillus carbonarius | (none) | MALNSYTLNVNYEAQLDAFKDFLKHFKYMQ |
| Aspergillus clavatus | (none) | MALLQYHAPVDYAAQLDSFKDFLQHFKYMQ |
| Aspergillus fumigatus | (none) | MALVQYPPPVDYAAQLNAFKDFLQHFKYMQ |
| Aspergillus nidulans | (none) | MALNQYPAPVDYHGQLEAFKDFLKHFKYMQ |
| Aspergillus niger | (none) | MALNAYTLNVNYEAQLDAFKDFLKHFKYMQ |
| Aspergillus oryzae | (none) | MALLQYHAPVDYAAQLDAFKDFLTHFKYMQ |
| Aureobasidium pullulans | (none) | MALLTYPSLINYEEQQAAFEDFLSSFKYME |
| Batrachochytrium dendrobatidis | (none) | MSLPAFFVNINFDEEKTKIESFLSKFKYLD |
| Botryotinia fuckeliana | (none) | MALLQYKAPVNYEAHQEAFEDFLSTFKYLE |
| Calcarisporiella thermophila | (none) | MAPVATSVYLNFDQEQEKLLEFLEKFKYHD |
| Ceriporiopsis subvermispora | (none) | ------------------------------ |
| Chaetomium globosum | (none) | MALLQMKAPVDYEVQLTAFEHFLSDFKYKE |
| Coccidioides immitis | (none) | MALLQFKAPVKYSEQKEVLKDFLEHFKYMQ |
| Coccidioides posadasii | (none) | MALLQFKAPVKYSEQKEVLKDFLEHFKYMQ |
| Cochliobolus heterostrophus | (none) | MALLTTSAPVNYNEQEAAFVDFLKNYKYMD |
| Coprinopsis cinerea | (none) | MSLTTVPNPVYYNQEKEKIQDFLSKFKYMK |
| Corynascus thermophilus | (none) | ----------------SAFESFLSDFKYRE |
| Cryphonectria parasitica | (none) | MALLQWKAPVDYEAQLTAFKTFLQDFKYRD |
| Cryptococcus neoformans | (none) | MAMPVANVQINYEEESAKIEDFLERYKYLR |
| Drosophila melanogaster | (none) | MA------RRDYAQDRESIKTFLSEFVYGS |
| Fusarium graminearum | (none) | MALREFKAPVSYEKQQHAFQEFLTGFKYKN |
| Gloeophyllum trabeum | (none) | MSLPVVTINVSYESEKERIQEFLSKFKYMQ |
| Heterobasidion annosum | (none) | MSLPVVNLSVNYDDEKQKIETFLKTFKYMS |
| Laccaria bicolor | (none) | MSLPIITLNINYEDEKDRIKDFLSKFKYMN |
| Lachancea thermotolerans | (none) | MSLPSLQIPVDYAQIQASVEDFLLHFKYMA |
| Magnaporthe oryzae | (none) | MALLQYAAPVSYSAQQTGFENFIQDFKYRD |
| Malassezia globosa | (none) | ------------------------------ |
| Malbranchea cinnamomea | (none) | MALLQYRAPVKYSEQAEIIKDFLQNFKYTQ |
| Melampsora larici-populina | (none) | MAIQELKDKYDYQAQSELIKTFLSKTRYMD |
| Mucor circinelloides | (none) | MALPVTIQNVNYQEDKDFLDSFFRGYKYDK |
| Myceliophthora thermophila | (none) | MALLQMKAPVDYQVQQAAFESFLSDFKYRE |
| Mycosphaerella fijiensis | (none) | MALLQYKNLVNYEEQTAAFKDFLQNFKYMN |
| Mycosphaerella graminicola | (none) | --------------------------KYMN |
| Myriococcum thermophilum | (none) | MALLQMKAPVDYQVQQAAFESFLSDFKYRD |
| Nectria haematococca | (none) | MALREFKAPVSYEKQQHAFQDFLTGYKYKD |
| Neosartorya fischeri | (none) | MALVQYPPPVDYAAQLNAFKDFLQHFKYMQ |
| Neurospora crassa | (none) | MALLRYPAPVDYDAQMSAFENFLDDFKYKE |
| Neurospora discreta | (none) | MALLRYPAPVDYDAQTSAFETFLDEFKYRE |
| Neurospora tetrasperma | (none) | MALLRYPAPVDYDAQMSAFENFLDDFKYKE |
| Paracoccidioides brasiliensis | (none) | MALLQYRAPVKYAVQQEIFKNFLQTFKYMK |
| Penicillium chrysogenum | (none) | MSLLQYPPPVDYSAQLNGFKDFLKGFKYMQ |
| Penicillium marneffei | (none) | MALLQYPAPVDYAAQQEAFKDFLKDFKYMR |
| Phaeosphaeria nodorum | (none) | ---------------TAAFVDFLKNFKYMN |
| Phanerochaete chrysosporium | (none) | MALPVVNINIDYEAEKDKIGQFLSNFKYMD |
| Phycomyces blakesleeanus | (none) | MALLPVNTGVNYDEEKVSLQNFLENFKYMG |
| Pichia stipitis | (none) | MSLPAIQMRVNYSEYRSIVKDFLETFKYMN |
| Pleurotus ostreatus | (none) | MSLPTVPINVDYEEERSTIQTFLTKFKYVH |
| Podospora anserina | (none) | MALFNMKAPVEYGEQAEAFEHFLTDFKYKL |
| Postia placenta | (none) | ----------------------------MQ |
| Pseudocercosporella herpotrichoides | (none) | MSLLTFRSPVNYEEHQLAFEDFLSTFKYME |
| Puccinia graminis | (none) | MSAANFKTKYDYSADIEVMKDFLNKTRYVE |
| Pyrenophora tritici-repentis | (none) | MALFTISAPVNYDEQEAAFVDFLKNYKYMN |
| Rhizomucor miehei | (none) | MALTPISINVNYEQDKETLKTFLQSFKYLK |
| Rhizomucor pusillus | (none) | --------------------------KYMK |
| Rhizopus oryzae | (none) | MALLPVKITVNYNEDKENIAQFLQNFKYMQ |
| Rhodotorula graminis | (none) | MALPTINLGLDYDEDLEQIKTFLTKFKYLD |
| Saccharomyces cerevisiae | (none) | MSLPSIQLPVDYNNLFNEITDFLVTFKYMA |
| Schizophyllum commune | (none) | ------------------------------ |
| Schizosaccharomyces pombe | (none) | MALPTIDLKIEYEECQHKITDFLSHFKYMD |
| Sclerotinia sclerotiorum | (none) | MALLQYKAPVNYEAHQEAFEDFLSTFKYMD |
| Scytalidium thermophilum | (none) | MALLQMKSPVDYDAQLTAFQNFLSEFKYRE |
| Serpula lacrymans | (none) | MSLPVININISYDDEREKIQDFLSNFKYMD |
| Sordaria macrospora | (none) | MALLRYPAPVDYDAQMSAFENFLDGFKYKE |
| Spizellomyces punctatus | (none) | MAAPSFYPNVNYQQEKEKITNFLENFPYKE |
| Sporobolomyces roseus | (none) | ------------------------------ |
| Talaromyces stipitatus | (none) | MALLQYPAPVDYAAQREAFKDFLKGFKYMR |
| Talaromyces thermophilus | (none) | MSLLQYPAPVDYRRQLEAFKDFLKHFKYMQ |
| Thermoascus aurantiacus | (none) | MSLLQYPAPVDYAAQHEAFKDFLKHFKYMQ |
| Thermomyces ibadanensis | (none) | MSLLQYPAPVDYRRQLEAFKDFLKHFKYMQ |
| Thielavia terrestris | (none) | MALLQMKAPVDYQVQQTAFESFLSDFKYRD |
| Trametes versicolor | (none) | MALPVITIDVDYTAEKDRIKQFLSTFKYMQ |
| Tremella mesenterica | (none) | --------------------------KYMK |
| Trichoderma atroviride | (none) | MALREFKAPVNYESQQSAFESFLKDFKYND |
| Trichoderma reesei | (none) | ------------------------------ |
| Trichoderma virens | (none) | MALREFKAPVNYETQQSAFESFLKDFKYND |
| Trichophyton verrucosum | (none) | MALFPLRLQINYEEEKTVLKEFLQNFKYMA |
| Tuber melanosporum | (none) | MSVIKLSDEIDYDKQQVAFEAFLTGFKYML |
| Uncinocarpus reesii | (none) | MALLQFKAPVRYSEQKEVFKDFFEHFKYMQ |
| Ustilago maydis | (none) | MSLPTISLGINYDDERAKITDFLLFFFYMH |
| Verticillium albo-atrum | (none) | MALRQFKAPVQYEAQAAAFESFLKDFKYQI |
| Verticillium dahliae | (none) | MALRQFKAPVQYEAQAAAFESFLKDFKYQI |
Columns
None of the columns has a description.
