Matrix 13072 of Study 12814
Matrices
Title: nuclear
Description: Brassicaceae, Boechereae: seven low-copy nuclear loci (chalcone synthase, Dpa1, ITS, luminidependens, Mps35, Nuo, and pistillata), concatenated
Rows
Taxon Label | Row Segments | Characters 1?–30 |
---|---|---|
Halimolobos jaegeri 244 | (none) | ---ATATAAGC-TCTC--GCTCCCCGCT-A |
Boechera fernaldiana subsp. vivariensis 028 | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-A |
Boechera evadens 306a | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-A |
Boechera fernaldiana subsp. fernaldiana 007a | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-A |
Boechera davidsonii 086 | (none) | ----TATATGC-TCTCTCGCTCCCCGCC-A |
Boechera tiehmii 310a | (none) | ------------------------------ |
Boechera shockleyi 022a | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-A |
Boechera cobrensis 120 | (none) | --------TGC-TCTC--GCTCCCTGAT-A |
Boechera pendulocarpa 342a | (none) | ------------------------------ |
Boechera crandallii 003a | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-A |
Boechera rollei 311a | (none) | GTTATATATGC-TCTC--ACTCTCCGAT-A |
Boechera constancei 353a | (none) | GTTATATATGC-TCTC--GCTCTCCGAT-A |
Boechera suffrutescens 027 | (none) | GTTATATATGC-TCTC--GCTCTCCGAT-A |
Boechera lincolnensis 142 | (none) | GTTATATATGC-TCTC--GCTCCCCGTT-A |
Boechera pulchra 144 | (none) | ------------------------------ |
Boechera formosa 041 | (none) | GTTATATATGC-TCTC--GCTCCCCGTT-A |
Boechera yorkii 192 | (none) | GTTATATATGC-TCTC--GCTCCC--TT-A |
Boechera glaucovalvula 349c | (none) | GTTATATATGC-TCTC--GCTCCCCGTT-A |
Boechera rectissima 270 | (none) | GTTATATATGC-TCTC--GCTCCCCGTT-A |
Boechera rectissima 356a | (none) | GTTATATATGC-TCTC--GCTCCCCGTT-A |
Boechera oxylobula 004 | (none) | TGTTTATATGC-TCTC--GCTCCCCG-ATA |
Boechera villosa 180 | (none) | GTTATATATGC-TCTC--GCTCCCTG-ATA |
Boechera pallidifolia 331a | (none) | GTTATATATGC-TCTC--GCTCCCTG-ATA |
Boechera pallidifolia B335 | (none) | GTTATATATGC-TCTC--GCTCCCCG-ATA |
Boechera pallidifolia 069 | (none) | GTTATATATGC-TCTC--GCTCCCCG-ATA |
Boechera serpenticola 187 | (none) | GTTATATATGC-TCTC--GCTACCCA-ATA |
Boechera serpenticola 358a | (none) | GTTATATATGC-TCTC--GCTACCCA-ATA |
Boechera lasiocarpa 010a | (none) | GTTATATATGCGTCTC--GCTACCCAGATA |
Boechera puberula 018a | (none) | GTTATATATGC-TCTC--GCTACCCA-TTA |
Boechera puberula 167 | (none) | GTTATATATGC-TCTC--GCTACCCA-TTA |
Boechera subpinnatifida 148 | (none) | GTTATATATGC-TCTC--GCTACCCA-ATA |
Boechera lignifera 213 | (none) | ------------------------------ |
Boechera johnstonii 126b | (none) | GTTATATATGC-TCTC--GCTACCCG-ATA |
Boechera dispar 355a | (none) | GTTATATATGC-TCTC--GCTACCCG-ATA |
Boechera parishii 335a | (none) | GTTATATATGC-TCTC--GCTACCCG-ATA |
Nevada holmgrenii 084 | (none) | ------------------------------ |
Anelsonia eurycarpa 098 | (none) | GTTATATATGT-TCTC--GCTCCCCGCT-A |
Anelsonia eurycarpa 083 | (none) | ------------------------------ |
Sandbergia whitedii 248 | (none) | -TTATATATGT-TCTC--GCTCCCC{AG}C |
Cusickiella douglasii 243 | (none) | GTTATATATGC-TCTC--GC---CCGTT-A |
Cusickiella douglasii 370 | (none) | ------------------------------ |
Boechera canadensis 288 | (none) | GTTATATATGC-TTTC--GCTCCCCGTT-C |
Boechera canadensis 298 | (none) | GTTATATATGC-TTTC--GCTCCCCGTT-C |
Phoenicaulis cheiranthoides 085 | (none) | -TTATATATGC-TCTC--GCTCCCCGCT-A |
Phoenicaulis cheiranthoides 089 | (none) | ---ATATAT?C-TCTC--GCTCCCCGCT-A |
Crucihimalaya wallichii 242 | (none) | -----TTAAGC-TCCC--GCTCCCCG?TTA |
Transberingia bursifolia 249 | (none) | -TTATTTAAGC-TCTC--GCTCCCCGTT-A |
Polyctenium fremontii 087 | (none) | ATTATATATGC-TCTC--GCTCCCCGCT-A |
Polyctenium fremontii 247 | (none) | --TATATATGC-TCTC--GCTCCCCGCT-A |
Boechera serotina 094 | (none) | ------------------------------ |
Boechera laevigata 095 | (none) | GTTATATATG?-TCTC--GCTCCCCGTT-A |
Boechera missouriensis 245 | (none) | ------TATGC-TCTC--GCTCCCGCTT-A |
Boechera missouriensis 283a | (none) | GTTATATATGC-TCTC--GCTCCCG-TT-A |
Boechera laevigata 284 | (none) | GTTATATATGC-TCTC--GCTCCCCGTT-A |
Boechera dentata 403 | (none) | ------------------------------ |
Boechera dentata 404 | (none) | ------------------------------ |
Boechera repanda 308b | (none) | GTTATATATGC-TCTC--GCTCCCTGCT-A |
Boechera repanda 357a | (none) | GTTATATATGC-TCTC--GCTCCCTGTT-A |
Boechera breweri subsp. breweri 350a | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-T |
Boechera koehleri 351a | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-T |
Boechera breweri subsp. shastaensis 352a | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-T |
Boechera sparsiflora 023a | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-T |
Boechera arcuata 354a | (none) | GTTATATATGC-TCTT--GCTCCCCGTT-A |
Boechera sparsiflora 002a | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-T |
Boechera perennans 016 | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-A |
Boechera perennans 133 | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-A |
Boechera stricta 400a | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-A |
Boechera pygmaea 401b | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-A |
Boechera pendulocarpa 118a | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-A |
Boechera platysperma 017a | (none) | GTTATATATGCCTCTC--GCTCCCCGAT-A |
Boechera howellii 312a | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-A |
Boechera schistacea 147 | (none) | GTTATATATGC-TCTC--GCTCCCCGGT-A |
Boechera lyallii 314a | (none) | ------------------------------ |
Boechera williamsii 367a | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-A |
Boechera lyallii B242 | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-A |
Boechera oxylobula 005 | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-A |
Boechera pendulina 015 | (none) | GTTATATATGCCTCTC--GCTCCCCGAT-A |
Boechera pendulina 168 | (none) | GTGATATATGCCTCTC--GCTCCCCAAT-A |
Boechera collinsii 359a | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-A |
Boechera gracilipes 174 | (none) | GTTAT-TATGCTTCTC--GCTCCCCGAT-A |
Boechera nevadensis 013a | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-A |
Boechera stricta 025a | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-A |
Boechera spatifolia 124a | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-A |
Boechera spatifolia 322a | (none) | ----TATATGC-TCTC--GCTCCCCGAT-A |
Boechera texana 150d | (none) | GTTATATATGCCTCTC--GCTCCCCAAT-A |
Boechera fendleri 226b | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-A |
Boechera fendleri 229a | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-A |
Boechera gracilipes 347a | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-A |
Boechera cusickii B103 | (none) | ------TATGC-TCTC--GCTCCCCGAT-A |
Boechera lemmonii 313a | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-A |
Boechera polyantha 360a | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-A |
Boechera polyantha 361a | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-A |
Boechera collinsii 009a | (none) | GTTATATATGC-TCTC--GCTCCCCGAT-A |
Borodinia macrophylla 369 | (none) | ------------------------------ |
Boechera retrofracta 170 | (none) | GTTATATATGC?TCTC??GCTACCCA?ATA |
Columns
None of the columns has a description.