Matrix 139 of Study 1078
Matrices
Title: cytochrome b
Description: Legacy TreeBASE Matrix ID = M1630
Rows
Taxon Label | Row Segments | Characters 1?–30 |
---|---|---|
Xerus rutilus | (none) | ATGACCAACACCCGAAAATCTCACCCCTTA |
Xerus inauris | (none) | ATGACCAACACCCGAAAGTCCCATCCTCTA |
Tamiasciurus mearnsi | (none) | ATGACAAACATCCGCAAAACCCACCCTCTA |
Tamiasciurus hudsonicus | (none) | ?????????????????????????????? |
Tamiasciurus douglasii | (none) | ATGACAAACATCCGCAAAACCCACCCTCTA |
Tamias umbrinus | (none) | ATGACAAACATCCGCAAAACCCACCCCCTC |
Tamias townsendii AF147676 | (none) | ATGACAAACATCCGCAAAACCCACCCCCTC |
Tamias townsendii AF147674 | (none) | ATGACAAACATCCGCAAAACCCACCCCCTC |
Tamias striatus | (none) | ATGACAAACATCCGCAAAACCCACCCTCTT |
Tamias sonomae | (none) | ??????????????????????ACCCCCTC |
Tamias siskiyou | (none) | ATGACAAACATCCGCAAAACCCATCCTCTA |
Tamias sibiricus | (none) | ATGACAAACATCCGTAAAACTCACCCCCTT |
Tamias senex | (none) | ATGACAAACATCCGCAAAACCCACCCCCTC |
Tamias rufus AF147663 | (none) | ATGACAAACATCCGCAAAACCCACCCCCTC |
Tamias rufus AF147662 | (none) | ATGACAAACATCCGCAAAACCCACCCCCTT |
Tamias ruficaudus | (none) | ATGACAAACATCCGCAAAACCCATCCCCTT |
Tamias quadrivittatus AF147660 | (none) | ATGACAAACATCCGCAAAACCCACCCCCTC |
Tamias quadrivittatus AF147658 | (none) | ATGACAAACATCCGCAAAACCCACCCCCTC |
Tamias quadrimaculatus | (none) | ATGACAAACATCCGCAAAACCCATCCCCTC |
Tamias panamintinus | (none) | ATGACAAACATCCGCAAAACTCACCCCCTC |
Tamias palmeri | (none) | ATGACAAACATCCGCAAAACCCACCCCCTC |
Tamias ochrogenys | (none) | ????CAAACATCCGCAAAACCCACCCCCTC |
Tamias obscurus | (none) | ATGACAAACATCCGCAAAACCCACCCCCTC |
Tamias minimus AF147650 | (none) | ATGACAAACATCCGCAAAACTCATCCCCTC |
Tamias minimus AF147645 | (none) | ATGACAAACATCCGCAAAACCCATCCCCTC |
Tamias merriami | (none) | ATGACAAACATCCGCAAAACCCACCCCCTC |
Tamias durangae | (none) | ATGACAAACATCCGCAAAACCCACCCCCTC |
Tamias dorsalis AF147641 | (none) | ATGACAAACATCCGCAAAACCCACCCCCTC |
Tamias dorsalis AF147639 | (none) | ATGACAAACATCCGCAAAACCCACCCCCTT |
Tamias cinericollis AF147638 | (none) | ATGACAAACATCCGCAAAACCCACCCCCTC |
Tamias cinericollis AF147636 | (none) | ATGACAAACATCCGCAAAACCCACCCCCTC |
Tamias canipes | (none) | ATGACAAACATCCGTAAAACCCACCCCCTC |
Tamias bulleri | (none) | ATGACAAACATCCGCAAAACCCACCCCCTT |
Tamias amoenus AF147632 | (none) | ATGACAAACATCCGAAAAACCCACCCCCTC |
Tamias amoenus AF147630 | (none) | ATGACAAACATCCGAAAAACCCACCCCCTC |
Spermophilus xanthoprymnus | (none) | ATGACAAACACTCGTAAAACCCATCCTTTA |
Spermophilus washingtoni | (none) | ATGACAAACACTCGCAAAACTCACCCCTTA |
Spermophilus variegatus utah | (none) | ATGACAAATATCCGTAAAACCCATCCCCTA |
Spermophilus variegatus | (none) | ATGACAAATATCCGTAAAACCCATCCCCTA |
Spermophilus undulatus AF157912 | (none) | ATGACAAACACTCGCAAAACTCATCCTTTA |
Spermophilus undulatus AF157906 | (none) | ATGACAAACACTCGCAAAACTCATCCTTTA |
Spermophilus tridecemlineatus arenicola | (none) | ATGACAAACATTCGTAAAACTCACCCTTTA |
Spermophilus townsendi vigilis | (none) | ATGACAAACACTCGCAAAACTCACCCTCTA |
Spermophilus townsendi townsendi | (none) | ATGACAAACACTCGCAAAACTCACCCTTTA |
Spermophilus townsendi mollis | (none) | ATGACAAACACTCGCAAAACTCACCCTTTA |
Spermophilus townsendi idahoensis | (none) | ATGACAAACACTCGCAAAACCCACCCTTTA |
Spermophilus tereticaudus | (none) | ATGACAAACACTCGCAAGACTCATCCTCTA |
Spermophilus suslicus AF157898 | (none) | ATGACAAACACTCGTAAAACCCACCCTCTA |
Spermophilus suslicus AF157895 | (none) | ATGACAAACACTCGTAAAACCCACCCTCTA |
Spermophilus spilosoma marginatus AF157911 | (none) | ATGACAAACATTCGCAAAACTCACCCCTTA |
Spermophilus spilosoma AF157846 | (none) | ATGACAAACACTCGCAAAACTCACCCCTTA |
Spermophilus saturatus | (none) | ATGACAAACATCCGCAAAACCCACCCCTTA |
Spermophilus richardsoni | (none) | ATGACAAACATCCGCAAAACTCACCCTTTA |
Spermophilus relictus AF157876 | (none) | ATGACAAACACTCGTAAAACCCACCCTTTA |
Spermophilus relictus AF157867 | (none) | ATGACAAACACTCGTAAAACCCACCCTTTA |
Spermophilus pygmaeus AF157910 | (none) | ATGACAAACACCCGTAAAACCCACCCTTTA |
Spermophilus pygmaeus AF157907 | (none) | ATGACAAACACCCGTAAAACCCACCCTTTA |
Spermophilus perotensis | (none) | ATGACAAACACTCGCAAAACTCACCCCCTA |
Spermophilus parryi plesius | (none) | ATGACAAACATCCGCAAAACTCACCCTTTA |
Spermophilus parryi kenicotti | (none) | ATGACAAACATCCGCAAAACTCACCCTTTA |
Spermophilus parryi | (none) | ATGACAAACATCCGCAAAACTCACCCTTTA |
Spermophilus pallidicauda | (none) | ATGACAAACACTCGTAAAACCCACCCTTTA |
Spermophilus musicus | (none) | ATGACAAACACTCGTAAAACTCACCCTTTA |
Spermophilus mohavensis | (none) | ATGACAAACACCCGCAAAACTCACCCTCTA |
Spermophilus mexicanus parvidens | (none) | ATGACAAACATTCGTAAAACTCACCCCTTA |
Spermophilus mexicanus mexicanus | (none) | ATGACAAACATTCGTAAAACTCATCCTTTA |
Spermophilus major AF157905 | (none) | ATGACAAACACCCGTAAAACCCACCCTTTA |
Spermophilus major AF157903 | (none) | ATGACAAACACTCGTAAAACCCACCCTTTA |
Spermophilus madrensis AF157947 | (none) | ATGACAAACATCCGCAAAACCCACCCCTTA |
Spermophilus madrensis AF157946 | (none) | ATGACAAACATCCGCAAAACCCACCCCTTA |
Spermophilus lateralis trepidus AF157950 | (none) | ATGACAAACATCCGCAAAACCCACCCCTTA |
Spermophilus lateralis trepidus AF157887 | (none) | ATGACGAACATCCGCAAAACCCACCCCTTA |
Spermophilus fulvus | (none) | ATGACAAACACTCGTAAAACCCACCCTTTA |
Spermophilus franklinii AF157894 | (none) | ATGACAAACATTCGCAAAACTCACCCTCTA |
Spermophilus franklinii AF157893 | (none) | ATGACAAACATTCGCAAAACTCACCCTCTA |
Spermophilus erythrogenys AF157875 | (none) | ATGACAAACACCCGTAAAACCCACCCTTTA |
Spermophilus erythrogenys AF157855 | (none) | ATGACAAACACTCGTAAAACTCACCCTTTA |
Spermophilus elegans elegans | (none) | ATGACAAACATCCGCAAAACTCACCCTTTA |
Spermophilus dauricus | (none) | ATGACAAACATTCGTAAGACTCACCCTTTA |
Spermophilus columbianus ruficaudus | (none) | ATGACAAACACTCGCAAAACTCACCCTTTA |
Spermophilus columbianus columbianus | (none) | ATGACAAACACTCGCAAAACTCACCCTTTA |
Spermophilus citellus relictus | (none) | ATGACAAACACTCGTAAAACCCACCCTTTA |
Spermophilus citellus | (none) | ATGACAAACACTCGTAAAACCCACCCTTTA |
Spermophilus brunneus brunneus | (none) | ATGACAAACACTCGCAAAACCCACCCTTTA |
Spermophilus beldingi creber | (none) | ATGACAAACATTCGCAAAACTCACCCTTTA |
Spermophilus beechyi | (none) | ATGACAAATATCCGTAAAACCCATCCCTTA |
Spermophilus atricapillus | (none) | ATGACAAATATCCGTAAAACCCATCCCTTA |
Spermophilus armatus | (none) | ATGACAAACATTCGCAAAACTCACCCTTTA |
Spermophilus annulatus | (none) | ATGACAAACACTCGCAAAACCCACCCTCTA |
Spermophilus adocetus | (none) | ATGACAAACATCCGCAAAACCCATCCTCTA |
Spermophilopsis leptodactylus | (none) | ATGACAAACATCCGCAAAACCCACCCGCTA |
Sciurus vulgaris gi8347068 | (none) | ATGACAAATATCCGCAAAACCCACCCTCTA |
Sciurus vulgaris AB030028 | (none) | ?????????????????????????????? |
Sciurus stramineus | (none) | ?????????????????????????????? |
Sciurus niger | (none) | ATGACAAATATCCGTAAAACCCACCCACCT |
Sciurus lis AB043881 | (none) | ???????????????????????????CTA |
Sciurus lis AB030024 | (none) | ?????????????????????????????? |
Sciurus carolinensis | (none) | ATGACAAATATCCGCAAAACCCACCCACTA |
Sciurus aestuans | (none) | ATGACAAATATCCGTAAAACCCACCCATTG |
Sciurus aberti kaibabensis | (none) | ATGACAAATATCCGTAAAACCCACCCACTA |
Sciurus aberti chuscensis | (none) | ATGACAAATATCCGTAAA??????CCACTA |
Sciurus aberti barberi | (none) | ATGACAAATATCCGTAAA??????CCACTA |
Sciurillus pusillus | (none) | ATGACAAATATCCGCAAAACCCACCCTATT |
Pteromys volans | (none) | ???????????????????????????CTA |
Pteromys momonga | (none) | ???????????????????????????CTA |
Petinomys setosus | (none) | ???????????????????????????CTA |
Petaurista philippensis | (none) | ???????????????????????????CTA |
Petaurista petaurista | (none) | ???????????????????????????CTA |
Petaurista leucogenys | (none) | ???????????????????????????CTC |
Petaurista elegans | (none) | ???????????????????????????TTA |
Petaurista alborufus | (none) | ???????????????????????????CTA |
Pedetes surdaster | (none) | ATGAAAAACCTACGAAAAACCCACCCTCTA |
Paraxerus cepapi | (none) | ???????????????AAAACACACCCCCTA |
Microsciurus flaviventer | (none) | ATGACAAATCTCCGCAAAACCCACCCACTA |
Marmota vancouverensis | (none) | ATGACAAACACTCGCAAAACCCATCCTTTA |
Marmota sibirica sibirica | (none) | ATGACAAACACCCGCAAAACCCACCCTCTA |
Marmota olympus | (none) | ATGACAAACACTCGCAAAACCCATCCTTTA |
Marmota monax ochracea | (none) | ATGACAAACACCCGCAAAACCCATCCTCTA |
Marmota monax monax | (none) | ATGACAAACATCCGCAAAACCCATCCTCTA |
Marmota menzbieri zachidovi | (none) | ATGACAAACACCCGCAAAACCCATCCTCTA |
Marmota marmota marmota AF143930 | (none) | ATGACAAACACCCGCAAAACCCACCCTCTA |
Marmota marmota marmota AF143929 | (none) | ATGACAAACACCCGCAAAACCCACCCTCTA |
Marmota Marmota | (none) | ATGACAAACACCCGCAAAACCCACCCTCTA |
Marmota himalayana robusta | (none) | ATGACAAACATCCGCAAAACCCACCCTCTA |
Marmota flaviventris obscura | (none) | ATGACAAACACCCGCAAAACCCACCCTTTA |
Marmota flaviventris luteola | (none) | ATGACAAACACCCGTAAAACCCACCCTTTA |
Marmota caudata caudata | (none) | ATGACAAACATCCGTAAAACCCATCCTCTA |
Marmota caudata aurea | (none) | ATGACAAACACCCGCAAAACCCATCCTCTA |
Marmota camtschatica doppelmayri | (none) | ATGACAAACACCCGCAAAACTCACCCTCTA |
Marmota camtschatica camtschatica | (none) | ATGACAAACACCCGCAAAACTCACCCTCTA |
Marmota caligata caligata | (none) | ATGACAAACACTCGTAAAACCCATCCTTTA |
Marmota broweri | (none) | ATGACAAACACCCGCAAAATCCATCCCCTA |
Marmota bobak bobak AF143917 | (none) | ATGACAAACACCCGCAAAACCCACCCTCTA |
Marmota bobak bobak AF143916 | (none) | ATGACAAACACCCGCAAAACCCACCCTCTA |
Marmota baibacina kastchenkoi | (none) | ATGACAAACATCCGCAAAACCCACCCTCTA |
Marmota baibacina centralis | (none) | ATGACAAACATCCGCAAAACCCATCCTCTA |
Idiurus macrotis | (none) | ATGGCAAACCTACGAAAAACCCACCCGCTA |
Hylopetes phayrei | (none) | ???????????????????????????CTA |
Graphiurus murinus | (none) | ATGACAAACATTCGCAAATCCCACCCATTA |
Glis glis | (none) | ATGACAAACATTCGCAAATCCCACCCTCTC |
Glaucomys volans GVO389531 | (none) | ATGACAAACATCCGTAAAACTCACCCTCTA |
Glaucomys volans AF157921 | (none) | ATGACAAACATCCGCAAAACTCACCCTTTA |
Glaucomys sabrinus griseifrons | (none) | ATGACAAACATCCGCAAAACTCACCCCCTA |
Glaucomys sabrinus AF359221 | (none) | ATGACAAACATCCGCAAAACTCACCCCCTA |
Glaucomys sabrinus AF359211 | (none) | ATGACAAACATCCGCAAAACTCACCCCCTA |
Glaucomys sabrinus AF271668 | (none) | ATGACAAACATCCGCAAAACTCACCCCCTA |
Glaucomys sabrinus AF030390 | (none) | ATGACAAACATCCGTAAAACTCACCCCCTA |
Eliomys quercinus | (none) | ATGAAAAATATCCGAAAAACACACCCACTA |
Cynomys parvidens | (none) | ATGACAAACACCCGCAAAACTCATCCTTTA |
Cynomys mexicanus | (none) | ATGACAAACACTCGCAAAACCCATCCTTTA |
Cynomys ludovicianus | (none) | ATGACAAACACTCGCAAAACCCATCCTTTA |
Cynomys leucurus | (none) | ATGACAAACACCCGCAAAACCCATCCTTTA |
Cynomys gunnisoni | (none) | ATGACAAACACCCGCAAAACCCATCCTTTA |
Cavia porcellus | (none) | ATGACCCACCTACGAAAATCACACCCACTC |
Castor fiber | (none) | ATGACAAACATCCGAAAAACACACCCACTA |
Callosciurus prevostii 2 | (none) | ???????????????????????????GTA |
Callosciurus prevostii 1 | (none) | ???????????????????????????TTA |
Callosciurus nigrovittatus | (none) | ???????????????????????????CAA |
Callosciurus finlaysonii | (none) | ???????????????????????????CAA |
Callosciurus erythraeus 2 | (none) | ???????????????????????????CTA |
Callosciurus erythraeus 1 | (none) | ???????????????????????????CTA |
Belomys pearsonii | (none) | ???????????????????????????CTA |
Aplodontia rufa | (none) | ATGACCAACATCCGCAAAACCCATCCACTA |
Anomalurus sp ASP389526 | (none) | ATGACCAATACACGAAAAACACACCCCCTA |
Ammospermophilus leucurus | (none) | ATGACAAACATCCGCAAAACCCACCCTCTA |
Ammospermophilus interpres | (none) | ATGACAAACATCCGCAAAACCCACCCTCTA |
Ammospermophilus harrisii AHU46172 | (none) | ATGACAAACATCCGCAAAACCCATCCTCTA |
Ammospermophilus harrisii AF157926 | (none) | ATGACAAACATCCGCAAAACCCACCCTCTA |
Allactaga elater | (none) | ATGACCAACATACGAAAAACTCATCCTTTA |
Columns
None of the columns has a description.