#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 19, 2024; 9:50 GMT TreeBASE (cc) 1994-2008 Study reference: Johnston P., & Park D. 2005. Chlorociboria (Fungi, Helotiales) in New Zealand. New Zealand Journal of Botany, 43. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S1417] BEGIN TAXA; TITLE TaxonLabelSet12114; DIMENSIONS NTAX=46; TAXLABELS Botryotinia_fuckeliana Chlorociboria_aeruginascens_China_PDD76435 Chlorociboria_aeruginascens_USA_PDD76435 Chlorociboria_aeruginascens_USA_PDD77803 Chlorociboria_aeruginascens_ssp_australis_PDD74099 Chlorociboria_aeruginascens_ssp_australis_PDD74101 Chlorociboria_aeruginascens_ssp_australis_PDD81763 Chlorociboria_aeruginosa_Europe_Z81426 Chlorociboria_aeruginosa_USA_PDD81292 Chlorociboria_albohymenia Chlorociboria_argentinensis_PDD77445 Chlorociboria_argentinensis_PDD77447 Chlorociboria_awakinoana_PDD71672 Chlorociboria_awakinoana_PDD74077 Chlorociboria_campbellensis Chlorociboria_clavula Chlorociboria_duriligna Chlorociboria_halonata_PDD71610 Chlorociboria_halonata_PDD71675 Chlorociboria_halonata_PDD73933 Chlorociboria_macrospora Chlorociboria_pardalota Chlorociboria_poutoensis Chlorociboria_procera Chlorociboria_spathulata_PDD70084 Chlorociboria_spathulata_PDD77695 Chlorociboria_spiralis Ciboria_betulae Ciborinia_erythronii Ciborinia_whetzelii Encoelia_fascicularis Hymenoscyphus_fructigenum Hymenoscyphus_virgultorum Lachnum_pteridophyllum Lanzia_allantospora Lanzia_griseliniae Monilinia_oxycocci Neofabraea_perennans Piceomphale_bulgarioides Rutstroemia_firma Scleromitrula_calthicola Sclerotinia_homoeocarpa Sclerotinia_sclerotiorum Torrendiella_eucalypti Torrendiella_madsenii Valdensinia_heterodoxa ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M1535] TITLE rDNA_ITS; LINK TAXA = TaxonLabelSet12114; DIMENSIONS NCHAR=536; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Botryotinia_fuckeliana --TTACAGAGTTCATGCCCGAAAGGGTAGA----CCT-CCCACCCTT-GTGT-ATTATTAC--TTTGTTGCTTTGGCGAGCTGCC-TTCG--------------GGCCTT-----------------GTATGCTCGCCAGAGAAT-ACCAAAACTCTTTTT--ATTAATGTCGTCT-GAGTA--CTAT-ATAATA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTT-CAACCC-TCAAGCTTAGCT--TGGTATTGAGTCTATGTCAGT---AATGGCAGGCTCTAAAATCAGTG-GCG-GCGCCGCTGGGTCC-TGAACGTAGTAATAT----CTCTCGTTACAGGTTCTCGGTGTGCTTCTGCCAA--AACCC--AAA-TTTTTCTATGGTTGACCTCGG Chlorociboria_aeruginascens_China_PDD76435 CATTACAGAGTTCGTGCCCACCTGGGTAGA----TCT-CCCACCC---GTGACATCTCACACCTCTGTTGCTTTGGCGGGC-TTGTGGCCCTGCTGCTGC---------------------------------CCGCCAGAGG---CCCCCAACTC-AGTAATCTTAGTGTCGTCT-GAGTC--CTACAAAA-TA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTT-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTG-CAACCC-TCAAGCGCTGCT--TGGTCTTGGGCCCGCCTGCT------GGGCGAGCCCCAAATACAGTG-GTA-GTGCTCCC-CGGCCCTGAGCGTAGTACATC-----ACCCGCTACAGGGCCTGGGGAACCGCGAGCCA-GCAATTTTTACCC---CTCAA-GGTTGACCTCGG Chlorociboria_aeruginascens_USA_PDD76435 CATTACAGAGTTCGTGCCCGCCTGGGTAGA----TCT-CCCACCC---GTGACATCTCACACCTTTGTTGCTTTGGCGGGC-TTGTGGCCCTGCTGCTGC---------------------------------CCGCCAGAGG---CCCCCAACTC-AGTAATTTTAGTGTCGTCT-GAGTC--CTACAAAA-TA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTT-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTG-CAACCC-TCAAGCGCTGCT--TGGTCTTGGGCCCGCCTGCT------GGGCGAGCCCCAAATACAGTG-GTA-GTGCTCCC-CGGCCCTGAGCGTAGTACATC-----ACCCGCTACAGGGCCTGGGGAACCGCGAGCCAAGCAATTTTTACCC---CTCAA-GGTTGACCTCGG Chlorociboria_aeruginascens_USA_PDD77803 CATTACAGAGTTCGTGCCCGCCTGGGTAGA----TCT-CCCACCC---GTGACATCTCACACCTTTGTTGCTTTGGCGGGC-TTGTGGCCCTGCTGCTGC---------------------------------CCGCCAGAGG---CCCCTAACTC-AGTAATTTTAGTATCGTCT-GAGTC--CTACAAAA-TA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTT-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTG-CAACCC-TCAAGCGCTGCT--TGGTCTTGGGCCCGCCTGCT------GGGCGAGCCCCAAATACAGTG-GTA-GTGCTCCC-CGGCCCTGAGCGTAGTACATC-----ACCCGCTACAGGGCCTGGGGAACCGCGAGCCA-GCAATTTTTACCC---CTCAA-GGTTGACCTCGG Chlorociboria_aeruginascens_ssp_australis_PDD74099 CATTACAGAGTTCATGCCCCGCTGGGTAGA----TCT-CCCACCC---GTGACATCTCACACCTTTGTTGCTTTGGCGGGC--TGCGGCACTGCTGCTGC---------------------------------CCGCCAGAGG---CCCCAAACTC-AGTACTCTTAGTGTTGTCC-GAGTC--CTATAAAAATA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTT-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGCATTCCGTAGGGCATGCCTGTTCGAGCGTCATTG-CAACCC-TCAAGCGCTGCT--TGGTCTTGGGCCCACCTGAC------GGGTGGGCCCCAAATACAGTG-GCAAGTGCTCCC-GGGCCCTGAGCGTAGTACATC-----TTCCGCTATGGGGCCCTGGGAAGCGCGAGCCA-GCAATCCATAC----TCCAAAA-GTTGACCTCGG Chlorociboria_aeruginascens_ssp_australis_PDD74101 CATTACAGAGTTCATGCCCCGCTGGGTAGA----TCT-CCCACCC---GTGACATCTCACACCTTTGTTGCTTTGGCGGGC--TGCGGCACTGCTGCTGC---------------------------------CCGCCAGAGG---CCCCAAACTC-AGTACTCTTAGTGTTGTCC-GAGTC--CTATCAAAATA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTT-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGCATTCCGTAGGGCATGCCTGTTCGAGCGTCATTG-CAACCC-TCAAGCGCTGCT--TGGTCTTGGGCCCACCTGAC------GGGTGGGCCCCAAATACAGTG-GCAAGTGCTCCC-GGGCCCTGAGCGTAGTACATC-----TTCCGCTATGGGGCCCTGGGAAGCGCGAGCCA-GCAATCCATACT--CTCCAAAA-GTTGACCTCGG Chlorociboria_aeruginascens_ssp_australis_PDD81763 CATTACAGAGTTCATGCCCCGCTGGGTAGA----TCT-CCCACCC---GTGACATCTCACACCTTTGTTGCTTTGGCAGGC--TGCGGCACTGCTGCTGC---------------------------------CCGCCAGAGG---CCCCAAACTC-AGTACTCTTAGTGTTGTCC-GAGTC--CTATAAAAATA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTT-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGCATTCCGTAGGGCATGCCTGTTCGAGCGTCATTG-CAACCC-TCAAGCGCTGCT--TGGTCTTGGGCCCACCTGAC------GGGTGGGCCCCAAATACAGTG-GCAAGTGCTCCC-GGGCCCTGAGCGTAGTACATC-----TTCCGCTACGGGGCCCTGGGAAGCGCGAGCCA-GCAATCCATACT--CTCCAAAA-GTTGACCTCGG Chlorociboria_aeruginosa_Europe_Z81426 CATTACTGAGCTCATGC-CTGCGGGGTAGA----TCT-CCCACCC---GTGACATCTCACACCTGTGTTGCTTTGGCGGGC--CGCGAGCCCCTCGCTGC-------------------CGGGAGGCAGGTGCCCGCCAGAGG----CCCAAATCC-AGTGCTCAGTATGTCGTCT-GAGTAACCAATACAAATA-GTTAAAAACTTTCAACAACGGATCTCTTGGTTCTGGATCCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTT-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGCATTCCGTAGGGCATGCCTGTTCGAGCGTCATAA-CAACCC-TCAAGCTCTGCT--TGGTCTTGGGCCT-CGCGCTC------GGCGGGCCTCAAACGCAGTG-GCG-GTGCTTCC-AGGCTCTGAGCGTAGTACATC-----TCCCGCTACAGCTGTCTGGAGGTTACCAGCCA-GCAACCCCTATT---TCTCT-AGGTTGACCTCGG Chlorociboria_aeruginosa_USA_PDD81292 CATTACTGAGCTCATGCCCTGCGGGGTAGA----TCT-CCCACCC---GTGACATCTCACACCTGTGTTGCTTTGGCGGGC--CGCGAGCCCCCCGCTGCCG-------------------GGAGGCAGGTGCCCGCCAGAGG----CCCAAATCC-AGTGCTCAGTATGTCGTCC-GAGTAACCAATACAAATA-GTTAAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTT-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGCATTCCGTAGGGCATGCCTGTTCGAGCGTCATAA-CAACCC-TCAAGCTCTGCT--TGGTCTTGGGCCTCGCCGCTC------GGCGGGCCTCAAACACAGTG-GCG-GTGCTTCC-AGGCTCTGAGCGTAGTACATC-----TCCCGCTACAGCTGCCTGGAGGTTACCAGCCA-GCAACCCCTATT---TCTCT-AGGTTGACCTCGG Chlorociboria_albohymenia --TTACCGAGTTCATGCCCTCGCGGGTAGT----CCT-CCCACCC---GTGCCATC-CACACCGTCGTTGCTTTGGCGGGC--CGCGAGCCCTGCGCGGCCC------------------TGCGGTACGTGC-CCGCCAGAGG----ACCACATCC-TGTCCGTC-AGTGTCGTCC-GAGTA--CGATCAAA-TC-GTGAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTCCGAGCGTCATCA-CCCCCC-TCAAGCTCAGCT--TGGTGTTGGGCTCCGCCTCT------GGGCGGGCCTCAAGAACAGTG-GCG-GCCCCCCC-GGGTCCTGAGCGTAGTACATC-----TCCCGCTACAGGTGCCCGCGGGCGGCTGGCCA-GCAACCCCCCCTCTTTTT-ACAGGTTGACCTCGG Chlorociboria_argentinensis_PDD77445 CATTACAGAGTTCGTGCCCTCCGGGGTAGA----TCT-CCCACCC---GTGACATCTCACACCTTTGTTGCTTTGGCGGGC-------------AGCTGC---------------------------------CCGCCAGAGG----CCTCAACTC-CGTATT-TCAGTGTCGTCA-GAGGA--CTAT-TTAATA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTT-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGCATTCCGTAGGGCATGCCTGTTCGAGCGTCATTA-CAACCC-TCAAGCGTGGCT--TGGTCTTGGGCCCGCCCTCT------GGGCGGGCCCCAAATACAGTG-GCA-GTGCTTTC-AGGCCCTGAGCGTAGTACATC-----TTCCGCTATGGGGCCTTGGGAGTGGCGAGCCA-GCAAC------TTATTCCTACAGGTTGACCTCGG Chlorociboria_argentinensis_PDD77447 CATTACAGAGTTCGTGCCCTCCGGGGTAGA----TCT-CCCACCC---GTGACATCTCACACCTTTGTTGCTTTGGCGGGC-------------AGCTGC---------------------------------CCGCCAGAGG----CCTCAACTC-CGTATT-TCAGTGTCGTCA-GAGGA--CTAT-TTAATA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTT-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGCATTCCGTAGGGCATGCCTGTTCGAGCGTCATTA-CAACCC-TCAAGCGTGGCT--TGGTCTTGGGCCCGCCCTCT------GGGCGGGCCCCAAATACAGTG-GCA-GTGCTTTC-AGGCCCTGAGCGTAGTACATC-----TTCCGCTATGGGGCCTTGGGAGTGGCGAGCCA-GCAAC------TTATTCCTACAGGTTGACCTCGG Chlorociboria_awakinoana_PDD71672 CATTACAGAGCTCATGCCCTGCGGGGTAGA----TCT-CCCACCC---GTGACATCTCACCCCTCTGTTGCTTTGGCGGTC---GCGAGCCCCTCGCCG---------------------AGGGGCCGGCG--CCGCCAGAGG---CCCCAAACTC-AGTGT-CTACGTGTCGTCA-GAGTA--CTATGAAA-TA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTT-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGCATTCCGTAGGGCATGCCTGTTCGAGCGTCATTA-CACCCC-TCAAGCACTGCT--TGGTGTTGGGCCCCGCCGCT------CGGCGGGCCTCAAATCCAGTG-GCG-GTGCCTCC-AGGCCCTGAGCGTAGTACGTC-----TGCCGCTCCAGGGGCT-GGGGGCCACCGGCCA-GCAACCCACC-----TCCTC--GGTTGACCTCGG Chlorociboria_awakinoana_PDD74077 CATTACAGAGCTCATGCCCTGCGGGGTAGA----TCT-CCCACCC---GTGACATCTCACCCCTCTGTTGCTTTGGCGGTC---GCGAGCCCCTCGCCG---------------------AGGGGCCGGCG--CCGCCAGAGG---CCCCAAACTC-AGTGT-CTACGTGTCGTCA-GAGTA--CTATGAAA-TA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTT-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGCATTCCGTAGGGCATGCCTGTTCGAGCGTCATTA-CACCCC-TCAAGCACTGCT--TGGTGTTGGGCCCCGCCGCT------CGGCGGGCCTCAAATCCAGTG-GCG-GTGCCTCC-AGGCCCTGAGCGTAGTACGTC-----TGCCGCTCCAGGGGCT-GGGGGCCACCGGCCA-GCAACCCACC-----TCCTC--GGTTGACCTCGG Chlorociboria_campbellensis CATTACAGAGTTCATGCCCTTAGGGGTAGT----CCT-CCCACCC---GTGAAATTTAA-ACCTTTGTTGCTTTGGCGGGC--CGCGAGCCCCTTGCTACCT------------------TATGGTACGTGC-CCGCCAGAGA----CCCAAATTC-TGTATATTA-GTGTCGTCA-GAGTA--CTATTTAA-TA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTT-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTA-CAACCC-TCAAGCTCTGCT--TGGTTTTGGGCCTTGCCCTT------GGGCAGGCCTCAAAAAAAGTG-GCG-GCACCTAT-AGGTCCTAAGCGTAGTACATT-----TTCCGCTATAGGTATCCGTAGGCTGTTGGCCA--ATAACCTAAAATTTATATTAAGGTTGACCTCGG Chlorociboria_clavula CATTACAGAGCTCATGCCCCCCGGGGTAGA----CCT-CCCACCC---CTGAGATCTCGCCCCTCTGTTGCTTTGGCGGGG------------CTGGTAC---------------------------------CCGCCAGAGG----CCTAAACTC-GCGTGT-CG-ACGTCGTCC-GAGTACTATATTCAA-TA-GTTAAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGCATTCCGTAGGGCATGCCTGTTCGAGCGTCATAG-CAACCC-TCAAGCCTGGCT--TGGTGTTGGGCCTCGCCTCG------GGGCGGGCCCCAAAGACAGTG-GCG-GCGCCCCC-GGGCCCTGAGCGTAGTACTTC-----CCTCGCTACAGGTACC-GGGAGGCGCTGGCCA-GCAACCACC----TTTCT-ACTGGTTGACCTCGG Chlorociboria_duriligna CATTACCGAGTTCATGCCCTGCGGGGTAGG----TCT-CCCACCC---GTGACATCCCACCCTCGTGTTGCTTTGGCGGGC--CGCGAGCCCCTCGCTGCCGC-------------------AAGGCCGGTGCCCGCCAGAGG----CCCTAATTC-AGTGTTCTT-GTAGTGTCT-GAGTA--CGATATAA-TT-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTA-CAACCC-TCAAGCCCGGCT--TGGTGTTGGGCGCCGCCGCCT------GGCGGGCCCCAAAAACAGTG-GCC-GCCCCTCT-GGGTCCCGAGCGTAGTACATC-----TCCCGCTACGGGCACCCGCAGGATGCTGGCCA-GCAACCCCCCCCCCCTTCTACAGGTTGACCTCGG Chlorociboria_halonata_PDD71610 CATTACAGAGTTTGTGCCCGCGAGGGTAGA----TCT-CCCACCC---GTGACTTGTGACAC---TGTTGCTTTGGGGAGC------------CCCGC-----------------------------------TCCCCAGAG-----ACCAAACCC-TGTAACT--TGCGTCGTCA-GAGCA--CTATATAA-TA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTC-AGTGAGTCATCGAATCTTTGAACGCACATTGCGCCCTATGGCAGTCCGTAGGGCATGCCTGTCCGAGCGTCATTG-CACCCC-TCTCGCCCTGCG--AGGTGTTGGCCGGAGCCCCT------GGGCCCGGCTCAAAAACAGTG-GCA-GCGTCCCC-GGGACCTCAGCGTAGTACACA-----TTCCGCTCGAGCTACCCTGGGTGCGCC--CCA--CAACCAACCCCACCA------GTTTGACCTCGG Chlorociboria_halonata_PDD71675 CATTACAGAGTTCGTGCCCGCGAGGGTAGA----TCT-CCCACCC---GTGACTTGTGACAC---TGTTGCTTTGGGGAGC------------CCCGC-----------------------------------TCCCCAGAG-----ACCAAACCC-TGTAACT--TGCGTCGTCA-GAGCA--CTATATAA-TA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTC-AGTGAGTCATCGAATCTTTGAACGCACATTGCGCCCTATGGCAGTCCGTAGGGCATGCCTGTCCGAGCGTCATTG-CACCCC-TCTCGCCCTGCG--AGGTGTTGGCCGGAGCCCCT------GGGCCCGGCTCAAAAACAGTG-GCA-GCGTCCCC-GGGACCTCAGCGTAGTACACA-----TTCCGCTCGAGCTACCCTGGGTGCGCC--CCA--CAACCAACCCCACCA------GTTTGACCTCGG Chlorociboria_halonata_PDD73933 CATTACAGAGTTCGTGCCCGCGAGGGTAGA----TCT-CCCACCC---GTGACTTGTGACAC---TGTTGCTTTGGGGAGC------------CCCGC-----------------------------------TCCCCAGAG-----ACCAAACCC-TGTAACT--TGCGTCGTCA-GAGCA--CTATATAA-TA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTC-AGTGAGTCATCGAATCTTTGAACGCACATTGCGCCCTATGGCAGTCCGTAGGGCATGCCTGTCCGAGCGTCATTG-CACCCC-TCTCGCCCTGCG--AGGTGTTGGCCGGAGCCCCT------GGGCCCGGCTCAAAAACAGTG-GCA-GCGTCCCC-GGGACCTCAGCGTAGTATATA-----TTCCGCTCGAGCTACCCTGGGTGCGCC--CCA--CAACCAACCCCACCA------GTTTGACCTCGG Chlorociboria_macrospora CATTACAGAGTTTGTGCCCTGTGGGGTAGA----TCT-CCCACCC---GTGAAATCTCACACCTGTGTTGCTTTGGCGGGC--AGCGAGCCTCTCGCTGCTG------------------GGAGGTAGGTGT-CCGCCAGAGG----CCTAAATCT-AGTGT-ACG-GTGTCGTCG-GAGTA--CTGTAAAA-TA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTA-CAACCC-TCAAGCTCTGCT--TGGTATTGGGCCTCGCTGCT------GGGCGGGCCTCAAACACAGTG-GCG-GTGCTCCT-AGGCCCTGAGCGTAGTACATC-----TTCCGCTACAGTGGCCCGGGAGCGGCCTGCCA-GCAACCTCTA-----TCTCT-AGGTTGACCTCGG Chlorociboria_pardalota CATTACTGAGCTCATGCCCTGTAGGGTAGA----TCT-CTCACCC---GTGACATCTCTCACCTGTGTTGCTTTGGCGGGC--C-CAAGCCC-TCGCTGCCG-------------------GAAGGCAGGTGTCCGCCAGAGG----CCCAAATTC-AATGTTTGATATGTCGTCT-GAAGA--TTATACAA-TA-GTTAAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTT-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGCATTCCGTAGGGCATGCCTGTTCGAGCGTCATGA-CAACCC-TCAAGCGCTGCT--TGGTCTTGGGTCTCGCTACTC------AGTGGGCCTTAAACGCAGTG-GCA-GTGCTTCC-AGGCCCTGAGCGTAGTACATC-----TTCCGCTACAGCTGCCGGGAGGCTACCAGCCA-GCAACCCCTATC---TCTCT-AGGTTGACCTCGG Chlorociboria_poutoensis CATTACTGAGCTCATGCCCTACGGGGTAGA----TCT-CCCACCC---GTGACATCTCACACCTGTGTTGCTTTGGCGGGC--CGCGAGCCCCTCGCTGCCG-------------------GAAGGCAGGTGTCCGCCAGAGG----CCCAAATTC-AATGTTTAGTATGTTGTCT-GAGGA--TTATACAA-TA-GTTAAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTT-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGCATTCCGTAGGGCATGCCTGTTCGAGCGTCATGA-CAACCC-TCAAGCGCTGCT--TGGTCTTGGGCCCCGCTACTC------AGCGGGCCTCAAATGCAGTG-GCG-GTGCTTCC-AGGCCCTGAGCGTAGTACATC-----TTCCGCTACAGCCATCTGGGGGCCACCAGCCA-GC-ACCCCTCTT---TCTCT-AGGTTGACCTCGG Chlorociboria_procera CATTACAGAGAACATGCCCTAGCGGGTAGT----CCT-CCCACCC---GTGAGAACTCACACCCTTGTTGCTTTGGCGGGC--CGCGAGCCCCTCGCTCCCC------------------TCGGGGATGCGC-CCGCCAGAGG----CCCAAATTC-TGTGT--CG-GTGTCGTCA-GAGTA--CTATACAA-TA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC-AGTGAACCATCGAATCTTTGAACGCACATTGCGCCCTATGGCATTCCGTAGGGCATGCCTGTTCGAGCGTCATTG-CAACCC-TCAAGCTCCGCT--TGGTGTTGGGCTCCGCCTCG------GGGCGGGCCTCAAAGACAGTG-GCG-GCGCCCCC-GGGCCCTGAGCGTAGTACATC-----TCCCGCTACAGGCCCCCGGTGGTGGCTGGCCA-GCAACCCCCAA--TCTTA-CGTGGTTGACCTCGG Chlorociboria_spathulata_PDD70084 ---------GCTCGTGCCCTACGGGGTAGA----TCT-CCCACCC---GTGACATCTTACACTATTGTTGCTTTGGCGGGC--CGCGAGCCCCTCGTTGCCG------------------GGAGGCAGGTGC-CCGCCAGAGG---CCTCAAATTC-AATGTTTGC-GTATTGTCT-GAGTA--CTATATAA-TT-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTT-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGCATTCCGTAGGGCATGCCTGTTCGAGCGTCATTA-CAACCC-TCAAGCTCTGCT--TGGTATTGGGCCGCGCCGCT------GGGCGGGCCTCAAACGCAGTG-GCG-GTGCCCCCCAGGCCCTGAGCGTAGTACCCC-----TCTCGCTACAGCAGTCTAGGGGCCACTGGCCA-GCACCCCCCCCCC--TCTCT-AGGT-GACCTCGG Chlorociboria_spathulata_PDD77695 -----------------------GGGTAGA----TCT-CCCACCC---GTGACATCTTATACTATTGTTGCTTTGGCGGGC--CGCGAGCCCCTCGTTGCCG------------------GGAGGCAGGTGC-CCGCCAGAGG---CCTCAAATTC-AATGTTTGC-GTATTGTCT-GAGTA--CTATATAA-TT-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGCATTCCGTAGGGCATGCCTGTTCGAGCGTCATTA-CAACCC-TCAAGCTCTGCT--TGGTATTGGGCCGCGCCGCT------GGGCGGGCCTCAAACGCAGTG-GCG-GTGCCCCCCAGGCCCTGAGCGTAGTACCCC-----TCTCGCTACAGCAGTCTAGGGGCCACTGGCCA-GCACCCCCCCCCCCCTCTCT-AGGTTGACCTCGG Chlorociboria_spiralis CATTACCGAGCGCGCGCCCCTCGGGGCCGG----TCT-CCC-CCC---GTGAGAACCAACCC--GTGTTGCTTTGGCGGGA-------------GAGCGCT------------------------------C-CCGCCAGAGG----CCCTAACCC-CGTCCTCTCAGTGTCGTCC-GAGCC-TGTACATAA-TC-GTGAAAA-CTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCT-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTCCGAGCGTCATTG-CACCCC-TCAAGCCTGGCT--TGGTCTTGGGCGCCGCCCCC----CGGGGCGGGCCTCAAACGCAGTG-GCG-GCTCCCCC-GGGGCCCGCGCGTGGTG-ATA-----CGTCGCGATGGGG-CCC-AGGGGCGCCGGCCAGCCTAACCC------TTCC-ACCGGTTGACCTCGG Ciboria_betulae ---TACCGAG???CTGAACCCTCAGGTCGA----CCT-CCCACCCCATGTTT-ATCATTAC--CCTGTTGCTTTGGCGATGCGGCCTTCGGGTCATC-------------------------------TCGGCTCGCCATAGCCCCAACCAAACTCT-TTT--ATTAGTGTTGTCC-GAGTC--GTAT-ATAATC-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATCT-CAACCC-TCAAGCAATGCTCTTGGTATTGAGCCCATGTCAGC---GATGGCAGGCTCCAAAAACAGTG-GCG-GCGCCGCTGGGTCC-TGAACGCAGTAAGAA-CACCTCTCGTTCCAGGTGCCCCGCGTGCTGCTGCCAA--AAGG----AA---TTTCTAAGTTTGACCTCGG Ciborinia_erythronii --------AGCTCGCGCCCGAGAGGGA-------CCT-CCCACCCTT-GCGT-ATCATTAC--TTTGTTGCTTTGGCGCGC-GCCCCCCGGGC-----------------------------------CACGCGCGCCAGAGGTG-AATCAAACTCT-TTT--GTACATGTCGTCT-GAGCA--CTAT-TTAATA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTA-CAACCC-TCAAGCTCAGCT--TGGTCTTGAGCCC-CGCCGGC---GATGGCGGGCTCCAAAATCAGTG-GCG-GCGCCGTCGGGTCC-TGAACGCAGTACGAT----ATTTCGTTACAGGTGCTCGGCGCGCTCCCGCCAA--AACCC----A-TCTTTCTATGGTTGACCTCGG Ciborinia_whetzelii CATTACAGAGTTCATGCCCGAGAGGGTAGA----CCT-CCCACCCTT-GTGT-ATGTCAATATTTTGTTGCTTTGGCGACTCGCCCTCGTGG---------------------------------------GCTCGCCAGTGGAT-CATCAAACTCTATCTT-ATCAATATCGTCA-GAGCA--TTATTATAATA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTA-ATATCCATCAAGCACCGCT--TGGTATTGAGCCCATGCCATCATCGATGGCAGGCTCCAAAGCTAGTG-GCG-GCGCCGGTGGGGCC-TGAACGTAGTAATAT----CTCTCGTTACAGGCTCTCAGCGCGCTTCTGCCCATTACATT---AA--CTCCTTAGGATTGACCTCGG Encoelia_fascicularis --------------------------------------------------GT-ATTATTAC--TTTGTTGCTTTGGCAGGCTGCTTTGC------------------------------------------GTCTGCCAGAGGTTT-ACCAAACTCTTTTT--ATTAATGTCGTCT-GAGTA--CTAT-ATAATA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTT-CAACCC-TCAAGCACAGCT--TGGTATTGAGCCCATGTCAGC---GATGGCAGGCTCTAAAATCAGTG-GCG-GCGTCGTTGGGTCC-TGAACGTAGTAATAT----CTTTCGTTACAGGTTCTCAGCGTGCTTCTGCCAA--AACCC---AA--CTTTCTAGTGTTGACCTCGG Hymenoscyphus_fructigenum CATTACAGAGTTCCTGCCCTCACGGGTAGAAA-----CCCCACCCTT-GTAT-ATACTATA---TTGTTGCTTTGGCAGGCCGCCTCACGGCGTTGGCTCAC--------------------GCTGACTGTGCCTGCCAGAGGAC--CCTAAACTCTGAAAT--ACAGTGTCGTCT-GAGTA--CTAT-TTAATA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTATACCAACTCCTACTCTCAGTAGGGTCTTGGGCTTCGCCTCT------GGGCGGGCCTTAAAATTAGTG-GCG-GTGCCTTG-AGGCTCTACGCGTAGTAATAC----TCCTCGCGATAGATGTCTTAGGGTGTCTTGCCA-GCAACCCCCAAC---TTTCTAAGGTTGA------ Hymenoscyphus_virgultorum -----------------------------------------ACCCTT-GTAT-ATTATAT--CTTTGTTGCTTTGGCAGGCCGCC-TCCGGGCACCGGC------------------TTACGCTGGATCGTGCCTGCCAAAGCGC--CCCAAATTCTGAAT--GTTAGTGTCGTCT-GAGTA--CTAT-ATAATA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTT-AAACCAATCCAGCTTG-CG--TGGTCTTGGGCTTTCGCTC-------TGGGGCGCCTCAAAATTAGTG-GCG-GTGCTGCC-AGGCTCTAAGCGTAGTAATTC----TTCTCGCTATAGGGTCCTGGTGGAGGCTTGC--AATAACCCC-AAATCTTTC-AAAGGTTGACCTCGG Lachnum_pteridophyllum CATTACAGAGTTCATGCCCCCTGGGGTAGA----TCT-CCCACCCTT-GTGT-ATTCAATTAGAATGTTGCTTTGGCGGGTCGTAGGCCTAGCTTAC---------------CCGGGAGACCCCCCGGTGCACCCGCCAGAGGAT-TCTCAAACCCTGAAT--GTTAGTGTCGTCT-GAGTA--CCAT-ACAATAAGTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC-AGTGAATCATCGAATCTTTGAACGCACATTGCACCCCTTGGTATTCCGGGGGGTATGCCTGTTCGAGCGTCATTA-CAACCAATCCAGCCTGGCT--GGGTCTTGGGCTC-TGCTACCTA----GGCAGGCCTTAAAATCAGTG-GCG-GTGCCCTT-AGGCTCTACGCGTAGTAATTC----TTCTCGCTATAGGGTTCCGAGGCGTGCTAGCTAAT-AACCCC--AA--CTTTCTACGGTTGACCTCGG Lanzia_allantospora CATTACAGAGTTCATGCCCTAACGGGTAGA----CCT-CCCACCCTT-GTGT-ATTTATAC--TTTGTTGCTTTGGCGGAGTCGCAGATCACAGTTGT----------GACATCAGCTCGCGTTGACACTCCTCCGCCAGAGGAA-ACCTAAATTCTGATT--ATTAGTGTCGTCT-GAGTA--CTAT-ATAATA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTT-CAACCC-TCAAGCTCAGCT--TGGTATTGGGATT-CATCGGTAA-AACGATGGTCCTCAAAATCAGTG-GCG-GCGCCGTTGGGTCC-TGAACGTAGTAATAT----ATTTCGTTACAGGTACCTCGCGTGCTTCTGCCATTAAACCCC-AAA--TTTTCTATGGTTGACCTCGG Lanzia_griseliniae -----CAGAGTTCATGCCCTAACGGGTAGA----CCT-CCCACCCTT-GTGT-ATTTATAC--TTTGTTGCTTTGGCGGAGAGTGGCGTCACA---------------TCCACGCACTGA-----GAAGTACTCCGCCAGAGGAA-AACTAAATTCTGATT--ATTAATATCGTCTCGAGTA--CTAT-ATAATA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTT-CAACCC-TCAAGCTCAGCT--TGGTATTGGGATT-CATTGGTAA-AACGATGGTCCTCAAAATCAGTG-GCG-GCGCCGTTGGGTCC-TGAACGTAGTATTAT----ATTTCGTTACAGGTACCTCGCGTGCTTCTGCCATTAAACCCC-AAA--TTTTCTATGGTTGACCTCGG Monilinia_oxycocci CATTATAGAGCTTACGCCCACAGGGGCAGAA---CCTCTCCACCCTTTGCGT-ACCCATAC--TTTGTTGCTTTGGCGGGCCGCC-CTCG--------------GGCCTC-----------------GCGCGCCCGCCAATG----ACCAAACCCTTTTTT--ATTCCTGTCGTCT-GAGCA--CTAT-ATAATA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGGGGGGCATGCCTGTTCGAGCGTCATTT-CAACCC-TCAAGCCCTGCT--TGGTGTTGAGCCCTCGCCAGC---GATGGCCGGCTCTAAAATCAGTG-GCG-GCGCCGCGGGGCCC-TGAACGTAGTAATCT----CTCTCGTTACAGGTGCTCGGCGCGCTCCCGTCGA---CCCCTTC-ATCCTTTCTATGGTTGACCTCGG Neofabraea_perennans CATTACAGAGTTCATGCCCTTCGGGGTAGA----TCT-CCCACCC---GTGTTAT-CATACC-ATTGTTGCTTTGGCGGGCCCGCCTCGGCCACCGGC-------------------TCCGGCTGGTGAGCGCCCGCCAGAGGAC--CCCAAACTCTGAAA--TTTAGTGTCGTCT-GAGTA--CTAT-ATAATA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTA-CAACCC-TCAAGCTCTGCT--TGGTGTTGGGCGT-CCCCGGC---AACGGGGTGCCCTAAAATCAGTG-GCG-GTGCCGTC-TGGCTCTAAGCGTAGTAAATC-----TCTCGCTCTGGATGCCCGGTGGAGACTTGCCAGT-AACCCCC-AA--TTTTTTAAGGTTGACCTCGG Piceomphale_bulgarioides CATTACAGAGTTCTCGCCTTATAGTACAGGTAGATCT-CCCACCCTT-GTGT-AGTAATAC--TATGTTGCTTTGGCA----------------------------------------------------CGCCCGCCAAAGGAC-CCCAAAACTCTGAAT--GTTAGTGTCGTCT-GAGTA--CTAT-ATAATA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTT-CAACCC-TCAAGCACTGCT--TGGTATTTGGGCCTCGCCGGC---GACGGCGGGCCCTAAAGACAGTG-GCG-GCGCCGCTGGGCCC-TGAGCGTAGTAAATC-----TCTCGCTACAGGGTCCCCGCGCCGTCTCGCCATC-AACCCCC-AA-TTTTTCTATGGTTGACCTCGG Rutstroemia_firma CATTACAGAGTTCATGC-CTCACGGGTAGA----CCT-CCCACCCTT-GTGT-ATCTATAC--ATTGTTGCTTTGGCGAGCTGCCTTGGCCTTAACTGCCCCAAGGCCTCAAGCTTTCGAGCCTGAGAGTCGCCCGCCGGAGGAA-AAATAAACCCTGATA--ATTAATGTCGTCT-GAGTA--CTAT-ATAATA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGG-ATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGGGGGGCATGCCTGTTCGAGCGTCATTT-CAACCC-TCAAGCTCACCT--TGGTATTGGGCCT-CGTCGGTTA-CACGACGGGCCTTAAAGTCAGTG-GCG-GCGCCGTTGGGTCC-TGAACGTAGTAATAT----ATTTCGTTACAGGTGCCCCGCGTGCTTCTGCCATTAAACCCCC-AA--TCTTTTATGGTTGACCTCGG Scleromitrula_calthicola CATTACAGAGTTCATGC-CTAACGGGTAGA----CCT-CCCACCCTT-GTGT-ATTTATAC--TATGTTGCTTTGGCGGGTTGCATTTCTCCCAAGG--------------AGGTGCTTCAGGGCTTGCTCGCCCGCCGAAGGAT-ACCTAAACTCTGTTT--ATTAATGTCGTCT-GAGTA--CTAT-ATAATA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTT-CAACCC-TCAAGCTCTGCT--TGGTATTGGGCCT-CGCCAGTAA-AATGGCGGGCCTTAAAATCAGTGTGCG-GTGCCGTTGGGTCC-TGAGCGTAGTAATTT---TTTCTCGCTACAGGTTCCCCGCGTGCCTCTGCCATTAAACCCC-AAA-TTTTTCTATGGTTGACCTCGG Sclerotinia_homoeocarpa ----------------------CGGGTAGA----CCT-CCAACCCTT-GTGT-ATCTCTAC--CATGTTGCTTTGGCAGGCTGCTCGACCCTTCCGGGGAC-AGCCTCAGCGCCCTCCGGGCCGGAGAGTCGCCTGCCGGAGAAA-ATCACAACTCTGAAT-TGTCAGTGTCGTCT-GAGTGA-CTAT-CTAATA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTT-CAACCC-TCAAGCTCTCTGCTTGGTATTGGGCCTCCGCCGGT----CACACGGCCCTTAAAGTCAGTG-GCG-GCGCCGCTGGGTCC-TGAACGTAGTAACACATACCTCTCGTTACAGGGTCCC-GCGCG-CTCCGCG--TAAACCCC-TCA--TTTCCTCTGGTTGACCTCGG Sclerotinia_sclerotiorum CATTACAGAGTTCATGCCCGAAAGGGTAGA----CCT-CCCACCCTT-GTGT-ATTATTAC--TTTGTTGCTTTGGCGAGCTGCTCTTCGG-------------GGCCTT-----------------GTATGCTCGCCAGAGAAT-ATCAAAACTCTTTTT--ATTAATGTCGTCT-GAGTA--CTAT-ATAATA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTT-CAACCC-TCAAGCTCAGCT--TGGTATTGAGTCCATGTCAGT---AATGGCAGGCTCTAAAATCAGTG-GCG-GCGCCGCTGGGTCC-TGAACGTAGTAATAT----CTCTCGTTACAGGTTCTCGGTGTGCTTCTGCCAA--AACCC--AAA--TTTTCTATGGTTGACCTCGG Torrendiella_eucalypti CATTACAGAGTTCCTGCCCTCACGGGTAGAAA-----CCCCACCCTT-GTGT-ATGTTAT--GTTTGTTGCTTTGACAGGCCGCC-TTCGGGCGCTGGC------------------TTCGGCTGTGCTGTGCCTGTCGGAGAAC--CCCCAACTCTGAAT--GTTTGTGTCGTCT-GAGTA--CTAT-ATAATA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCTAGGGGCATGCCTGTTCGAGCGTCATTTACACCAACTCCTACCTCGTGTAGGGTCTTGGGCTT-CGCCTCC-----GGGCGGGCCTCAAAATCAGTG-GCG-GCGCCATC-TGGCTCTAAGCGTAGTAAATC----TCCTCGCTATAGAACCCAGAGGGTGGTCCAGCCAGTAACCCC-AAA--TTTTTTATGGTTGACCTCGG Torrendiella_madsenii CATTACAGAGTTCCTGCCCTCACGGGTAGAAA-----CCCCACCCTT-GTGT-ATGTTAT--GTTTGTTGCTTTGACAGGCCGCC-TTCGGGCCCTGGC------------------TTCGGCTAGGCTGCGCCTGTCAGAGAAC--CCCCAACTCTGAAT--GTTAGTGTCGTCT-GAGTA--CTAT-ATAATA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATATACACCAACTCCTACTTCGTGTAGGGTCTTGGGCTT-CGCCTCT-----GGGCGGGCCTCAAAATCAGTG-GCG-GCGCCATC-TGGCTCTGAGCGTAGTAAATC----TCCTCGCTATAGAACCCAGAAGGTTAGCTGGCCAGTAACCCC-AAA---TTCTTAGGGTTGACCTCGG Valdensinia_heterodoxa CATTACAGAGAACAT-CCCTAGAGGATGGA----GCTCCCCACCCTT-GTGT-ATTATTAC--TTTGTTGCTTTGGCGAGCTGCC-TTCG--------------GGCCTCAAGCTTTCGAGCTT-GGGCGCGCTCGCCAGAGGAT-ATCAAAACTCTTTTT--ATTAATGTCGTCT-GAGTA--CTAT-ATAATA-GTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC-AGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTT-CAACCC-TCAAGCACTGCT--TGGTATTGAGCCCATGTCAGC---AATGGCAGGCTCTAAAATCAGTG-GCG-GCGCCGTTGGGTCC-TGAACGTAGTAATAT----CTCTCGTTACAGGTTCTCAGCGTGCTTCTGCCAA-CAACCCC-AAA--TTTTCTATGGTTGACCTCGG ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = rDNA_ITS) = N: 1-536; CODONPOSSET CodonPositions (CHARACTERS = rDNA_ITS) = N: 1-536; END;