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Matrix 15963 of Study 13888

About Citation title: "Evolution of host affiliation and substrate preference in a cosmopolitan fungal genus with evidence of interkingdom host jumps and major shifts in ecology".
About Study name: "Evolution of host affiliation and substrate preference in a cosmopolitan fungal genus with evidence of interkingdom host jumps and major shifts in ecology".
About This study is part of submission 13888 (Status: Published).

Matrices

Title: RPB2

Rows

Taxon Label Row Segments Characters 1?–30
Hypocrea aeruginea  (none) -CC-AGCTGTTTCGTGGCATCATGCGGAGG
Trichoderma aggressivum  (none) GCCAAGCTGTTCCGTGGCATCATGCGAAGG
Hypocrea alcalifuscescens  (none) ------------------------------
Hypocrea alni  (none) GCC-AGCTGTTCCGTGGCATCATGCGAAGG
Hypocrea alutacea  (none) GCC-AGTTGTTCCGTGGTATCATGCGAAGG
Trichoderma amazonicum  (none) ------------------------------
Hypocrea americana  (none) ------------------------------
Hypocrea andinensis  (none) GCCAAGCTGTTCCGTGGCATCATGCGAAGA
Trichoderma arundinaceum  (none) GCTAAGCTGTTCCGTGGTATCATGCGAAGG
Trichoderma asperelloides  (none) GCCAAACTGTTCCGTGGTATCATGCGTAGA
Trichoderma asperellum  (none) GCCAAGCTGTTCCGTGGTATCATGCGTAGA
Trichoderma atrogelatinosum  (none) ------------------------------
Trichoderma atroviride  (none) GCCAAGCTGTTCCGTGGTATCATGCGCAGA
Trichoderma aureoviride  (none) ------------------------------
Trichoderma austrokoningii  (none) ------------------------------
Hypocrea avellanea  (none) ------------------------------
Trichoderma brevicompactum  (none) ------------------------------
Trichoderma brunneoviride  (none) GCC-AGCTGTTCCGTGGCATCATGCGAAGG
Trichoderma candidum  (none) ------------------------------
Trichoderma caribbaeum  (none) GCCAAGTTGTTCCGTGGTATCATGCGCAGA
Trichoderma catoptron  (none) GCAAAGCTGTTCCGTGGTATCATGCGAAGG
Trichoderma ceraceum  (none) ------------------------------
Trichoderma ceramicum  (none) ------------------------------
Trichoderma cerinum  (none) ------------------ATCATGCGAAGG
Hypocrea chionea  (none) ------------------------------
Trichoderma chlorosporum  (none) ------------------------------
Trichoderma chromospermum  (none) ------------------------------
Trichoderma cinereoflava  (none) ------------------------------
Trichoderma cinnamomeum  (none) ------------------------------
Trichoderma citrinoviride  (none) ------------------------------
Trichoderma costaricensis  (none) ------------------------------
Trichoderma crassum  (none) ------------------------------
Trichoderma cremeum  (none) ------------------------------
Hypocrea crystalligena  (none) ------------------------------
Trichoderma cuneisporum  (none) ------------------------------
Hypocrea dacrymycella  (none) GGCAAGCTGTTCCGTGGTATCATGCGAAGG
Hypocrea danica  (none) GCT-AGCTGTTCCGTGGCATCATGCGAAGG
Hypocrea decipiens  (none) ------------------------------
Hypocrea delicatula  (none) GCCAAGCTGTTCCGTGGCATCATGCGAAGG
Trichoderma dingleyae  (none) GCCAAGTTGTTCCGTGGTATCATGCGCAGA
Trichoderma dorotheae  (none) GCCAAGTTGTTCCGTGGTATCATGCGCAGA
Hypocrea epimyces  (none) ------------------------------
Trichoderma erinaceus  (none) GCCAAGCTGTTCCGTGGTATTATGCGCAGA
Trichoderma estonicum  (none) GCCAAGCTGTTCCGTGGTATCATGCGAAGG
Hypocrea eucorticioides  (none) ------------------------------
Trichoderma evansii  (none) ------------------------------
Trichoderma fertile  (none) ------------------------------
Hypocrea flaviconidia  (none) GCCAAGCTGTTCCGTGGTATCATGCGCAGA
Hypocrea fomiticola  (none) GCTAGGCTGTTCCGTGGTATCATGCGAAGG
Trichoderma gamsii  (none) GCCAAGCTGTTCCGTGGTATCATGCGCAGA
Trichoderma gelatinosum  (none) ------------------------------
Trichoderma ghanense  (none) ------------------------------
Trichoderma hamatum01  (none) ------------------------------
Trichoderma hamatum02  (none) ------------------------------
Trichoderma hamatum03  (none) GCTAAGCTGTTCCGTGGTATCATGCGCAGG
Trichoderma harzianum01  (none) GCCAAGCTGTTCCGTGGTATCATGCGAAGG
Trichoderma harzianum02  (none) ------------------------------
Trichoderma harzianum03  (none) GCCAAGCTGTTCCGTGGTATCATGCGAAGG
Trichoderma harzianum04  (none) GCCAAGCTGTTCCGTGGTATCATGCGAAGG
Trichoderma harzianum05  (none) ------------------------------
Trichoderma harzianum06  (none) GCCAAGCTGTTCCGTGGTATCATGCGAAGG
Trichoderma harzianum07  (none) GCCAAGCTGTTCCGTGGTATCATGCGAAGG
Trichoderma harzianum08  (none) GCCAAGCTGTTCCGTGGTATCATGCGAAGG
Trichoderma harzianum09  (none) ------------------------------
Trichoderma harzianum10  (none) GCCAAGCTGTTCCGTGGTATTATGCGAAGG
Trichoderma helicum  (none) -------TCTTCCGTGGTATCATGCGGAGA
Hypomyces  (none) GCTAAGCTGTTCCGTGGCATTATGCGAAGA
Trichoderma intricatum  (none) GCCAAGCTGTTCCGCGGTATCATGCGCAGA
Trichoderma koningii  (none) ------------------------------
Trichoderma koningiopsis  (none) GCCAAGTTGTTCCGTGGTATCATGCGCAGA
Hypocrea leucopus  (none) GCC-AGCTGTTCCGTGGCATCATGCGAAGG
Trichoderma lieckfeldtiae  (none) GCCAAGCTGTTCCGTGGTATCATGCGCAGA
Trichoderma longibrachiatum  (none) ------------------------------
Trichoderma longipile  (none) ------------------------------
Hypocrea lutea  (none) GCCAAGCTGTTCCGTGGCATCATGCGAAGG
Trichoderma martiale  (none) GCCAAGCTGTTCCGTGGCATCATGCGCAGA
Hypocrea megalocitrina  (none) ------------------------------
Trichoderma melanomagnum  (none) ------------------------------
Hypocrea microcitrina  (none) ------------------------------
Trichoderma minutisporum  (none) ------------------------------
Hypocrea moravica  (none) GCTAAGCTGTTCCGTGGCATCATGCGAAGG
Hypocrea neorufa  (none) GCCAAGCTGTTCCGTGGTATCATGCGCAGA
Hypocrea nigrovirens  (none) ------------------------------
Trichoderma novaezelandiae  (none) ------------------------------
Hypocrea nybergiana  (none) GCC-AGCTGTTCCGTGGTATCATGCGAAGG
Trichoderma oblongisporum  (none) ------------------------------
Trichoderma ovalisporum01  (none) ------------------------------
Trichoderma ovalisporum02  (none) GCCAAGCTGTTCCGTGGTATCATGCGCAGA
Trichoderma pachybasioides  (none) ------------------------------
Trichoderma parapiluliferum  (none) GCC-AGCTGTTCCGTGGTATCATGCGAAGG
Trichoderma parareseei  (none) ------------------------------
Hypocrea parepimyces  (none) GCC-AGCTGTTCCGTGGCATCATGAGAAGG
Trichoderma parestonicum  (none) -------TGTTCCGTGGTATCATGCGAAGG
Hypocrea parmastoi  (none) ------------------------------
Hypocrea patella  (none) ------------------------------
Trichoderma paucisporum  (none) -------------------------GCAGA
Trichoderma petersenii  (none) GCCAAGTTGTTCCGTGGCATCATGCGCAGG
Hypocrea phyllostachydis  (none) ------------------------------
Hypocrea pillulifera  (none) ------------------------------
Hypocrea placentula  (none) GCC-AGCTGTTCCGTGGTATCATGCGAAGG
Trichoderma pleuroticola  (none) --------------------CATGCGAAGG
Trichoderma pleurotum  (none) GCCAAGCTATTCCGTGGCATCATGCGAAGG
Hypocrea protopulvinata  (none) ------------------------------
Trichoderma protrudens  (none) ------------------------------
Trichoderma pseudokoningii  (none) ------------------------------
Hypocrea pseudostraminea  (none) ------------------------------
Hypocrea psychrophila  (none) ------------------------------
Trichoderma pubescens  (none) GCCAAGCTGTTCCGTGGTATCATGCGCAGA
Hypocrea pulvinata  (none) ------------------------------
Trichoderma reesei  (none) GCCAAGCTGTTCCGTGGCATCATGCGAAGA
Hypocrea rodmanii  (none) GCCAAGCTGTTCCGTGGTATTATGCGAAGG
Trichoderma rogersonii  (none) ------------------------------
Trichoderma rossicum  (none) ------------------------------
Trichoderma saturnisporum  (none) ------------------------------
Hypocrea semiorbis  (none) GCTAAGCTGTTCCGTGGTATCATGCGAAGA
Hypocrea seppoi  (none) GCC-AGCTGTTCCGTGGCATCATGCGAAGG
Trichoderma sinuosum  (none) ------------------------------
Sphaerostilbella  (none) GCGAAGCTCTTCCGTGGTATTATGCGAAGA
Hypocrea spinulosa  (none) GCCAAGCTGTTCCGTGGCATCATGCGAAGG
Trichoderma spirale01  (none) GCCAAGCTGTTCCGTGGTATCATGCGTAGA
Trichoderma spirale02  (none) GCCAAGCTATTCCGTGGTATTATGCGAAGA
Trichoderma spirale03  (none) ------------------------------
Trichoderma stilbohypoxyli  (none) ------------------------------
Hypocrea straminella  (none) ------------------------------
Trichoderma strictipile  (none) ------------------------------
Trichoderma strigosum  (none) ------------------------------
Trichoderma stromaticum  (none) GCTAAGCTGTTCCGTGGTATCATGCGAAGG
Hypocrea subalpina  (none) GCCAAGCTGTTCCGCGGCATCATGCGAAGG
Hypocrea sulawesensis  (none) ------------------------------
Hypocrea sulfurea  (none) ------------------------------
Trichoderma surrotundum  (none) ------------------------------
Hypocrea tawa  (none) ------------------------------
Trichoderma thailandicum  (none) ------------------------------
Trichoderma thelephoricola  (none) ------------------------------
Trichoderma theobromicola  (none) ------------------------------
Trichoderma tomentosum  (none) ------------------------------
Trichoderma turrialbense  (none) ------------------------------
Trichoderma velutinum  (none) GCCAAGCTGTTCCGTGGTATCATGCGAAGG
Trichoderma victoriensis  (none) GCCAAGCTGTTCCGTGGTATCATGCGAAGG
Trichoderma virens  (none) ------------------------------
Trichoderma virescentiflava  (none) ------------------------------
Trichoderma viride  (none) ------------------------------
Trichoderma viridescens  (none) GCCAAGCTGTTCCGTGGTATCATGCGGAGA
Hypocrea voglmayrii  (none) ---------------------------AGA

Columns

None of the columns has a description.