#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 13, 2024; 12:07 GMT TreeBASE (cc) 1994-2008 Study reference: Fan D., Yue J., Nie Z., Li Z., Comes H., & Sun H. 2013. Phylogeography of Sophora davidii (Leguminosae) across the "Tanaka-Kaiyong Line", an important phytogeographic boundary in Southwest China. Molecular Ecology, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S13583] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=44; TAXLABELS Phaseolus_coccineus Piptanthus_nepalensis Sophora_davidii_S1 Sophora_davidii_S10 Sophora_davidii_S11 Sophora_davidii_S12 Sophora_davidii_S13 Sophora_davidii_S14 Sophora_davidii_S15 Sophora_davidii_S16 Sophora_davidii_S17 Sophora_davidii_S18 Sophora_davidii_S19 Sophora_davidii_S2 Sophora_davidii_S20 Sophora_davidii_S21 Sophora_davidii_S22 Sophora_davidii_S23 Sophora_davidii_S24 Sophora_davidii_S25 Sophora_davidii_S26 Sophora_davidii_S27 Sophora_davidii_S28 Sophora_davidii_S29 Sophora_davidii_S3 Sophora_davidii_S30 Sophora_davidii_S31 Sophora_davidii_S32 Sophora_davidii_S33 Sophora_davidii_S34 Sophora_davidii_S35 Sophora_davidii_S36 Sophora_davidii_S4 Sophora_davidii_S5 Sophora_davidii_S6 Sophora_davidii_S7 Sophora_davidii_S8 Sophora_davidii_S9 Sophora_flavescens Sophora_moorcroftiana_ Sophora_tomentosa Sophora_tonkinensis Thermopsis_alpina_ Trifolium_repens_ ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M16454] TITLE ITS_dataset_for_monophyly_assessment; LINK TAXA = Taxa; DIMENSIONS NCHAR=758; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Phaseolus_coccineus ATCA-CGAGCGTTTCGA-AA-CG--C-ATGTGGG-TAAGAGAGGCCTA--AATTCAATAGAGCAGC-ACAT-GACTTACTTG-GT--CTCGTGCGTAA-CA-----CAGCCACCA-CCTATCA--TGGCACA---------CCCTACCAAGG--TCTCGATTTTC--AACCA---ACCATGAGGCAATAGAGCTCAC-GGGAGG---CCAACA-TTCGCC-CTGCACAATACCCCTATCA--------ATATAGGAAAT--TGGCGAG-----AGGCTTCGATATGTGACGCCCAGGCAGAC-GTGCCCTCAAC--CTAATGGCATCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCTA-GATATCCGTTGCCGAGAGT-CATTCTATAT-TATGTGTCAGAACACA-ACC------CGCACGAAAACCGTCTCCGGT----GCC-ATGCAGGTGCGCTCAGAGC-----AAATTTTAAAT----TCCTTG-----ACGCATT-CAGCGCCG----GGGTTTGTGTT---TTGGCACAAA---GGA-------------GAACGCACAA-CATCGTCCTCCT---CCGAACCAGA--GGCAAGC-CGAGGTGTTGAACACCTC---AAACCA--TGAACCCTATGTGTTCAA-ACTGATTCAC{AG}TGTTGGTC----TGCATG--TAAGGCA Piptanthus_nepalensis --CA-TGGGCGACCAACAAGACG--C-CCATGGG-TCA-AAAGTCCC--AGAT-CGGCACGAGTG--ACG--CGCACGATCG-AT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCGC---------CCTCCACCAGGG--ACTCAATTTTTC-AACCA---ACCGTGAGA-CCTTGC--TCGCGGGA-AG---CCAACA-TTC---GCCCCACTCAAAGCCTAGC---------ACAAGGCTTAAGGCATTGG------GGGCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGAC--CTGATGGCGTCGGGCGCAACTTGCGTTCAACGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTAGGATATGTGTGTCACAACGCC-GCC------CGCACCGACACCGTCTCCGGT----GCCAACGAGGGCGCACTA-GA------CAA--TCTTTA---TTTCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTGT-TAG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG-GC---CAGGAGGAGA------------CCCACACAA-GGAGGGGCACCT---CCGACACAAG--AGGGGAC-CGAGGTGCCAAGCACCTC--TAG-CCAC----TGCTTTG- Sophora_davidii_S1 GTCG-TGGGCGGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCACG---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCCCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGC Sophora_davidii_S10 GTCG-TGGGC{AG}GCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCAC{AG}---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGC--AAG-CCACACCC-AGGCGGTCGA-ACAAATTCGCGGGTCGCAC----TGCTTTG-C Sophora_davidii_S11 GTCG-TGGGC{AG}GCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCACG---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGCGGTCGA-ACAAATTCGCGGGTCGCAC----TGCTTTG-CGACGA----T Sophora_davidii_S12 GTCG-TGGGC{AG}GCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCGCA---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGCGGTCAA-ACAAATTCGCGGGTCGCAC----TGCTTTG-CGA-TTAGGAT Sophora_davidii_S13 GTCG-TGGGC{AG}GCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCGCA---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CG{AG}CGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGCGGTCAA-ACAAATTCGCGGGTCGCAC----TGCTTTG-CGAGGATTCGA Sophora_davidii_S14 GTCG-TGGGC{AG}GCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCGCA---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGCGGTC{AG}A-ACAAATTCGCGGGTCGCAC----TGCTTTG-CGA-GAGTAGT Sophora_davidii_S15 GTCG-TGGGC{AG}GCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGC{AG}C{AG}---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCC{AG}TGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGCGGTC{AG}A-ACAAATTCGCGGGTCGCAC----TGCTTTG-CGA-AAACATA Sophora_davidii_S16 GTCG-TGGGC{AG}GCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGC{AG}CA---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGCGGTC{AG}A-ACAAATTCGCGGGTCGCAC----TGCTTTG-CGA----TGCT Sophora_davidii_S17 GTCG-TGGGC{AG}GCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGC{AG}CA---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGT{AG}CGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGC-ACAAATTCGCGGGTCGCAC----TGCTTTG-CGAACCC-AGGCGGTC{AG}A-ACAAATT Sophora_davidii_S18 GTCG-TGGGCAGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCACA---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGCGGTC{AG}A-ACAAATTCGCGGGTCGCAC----TGCTTTG-CGATTAGGATT Sophora_davidii_S19 GTCG-TGGGCAGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCACA---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGACACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGC-ACAAATTCGCGGGTCGCAC----TGCTTTG-CGAACCC-AGGCGGTCAA-ACAAATT Sophora_davidii_S2 GTCG-TGGGCGGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCAC{AG}---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAG-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAA-TAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGC Sophora_davidii_S20 GTCG-TGGGCAGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCACA---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCG{AG}CACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGCGGTCAA-ACAAATTCGCGGGTCGCAC----TGCTTTG-CGAAGGCGGTC Sophora_davidii_S21 GTCG-TGGGCAGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCGCA---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGCGGTCAA-ACAAATTCGCGGGTCGCAC----TGCTTTG-CGA-ACAGATT Sophora_davidii_S22 GTCG-TGGGCAGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCGCA---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CG{AG}CGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGC-ACAAATTCGCGGGTCGCAC----TGCTTTG-CGAACCC-AGGCGGTCAA-ACAAATT Sophora_davidii_S23 GTCG-TGGGCAGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCGCA---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGCGGTC{AG}A-ACAAATTCGCGGGTCGCAC----TGCTTTG-CGA---TGCTT Sophora_davidii_S24 GTCG-TGGGCAGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGC{AG}C{AG}---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGCGGTC{AG}A-ACAAATTCGCGGGTCGCAC----TGCTTTG-CGA-CGA--TG Sophora_davidii_S25 GTCG-TGGGCAGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGC{AG}CA---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGC-ACAAATTCGCGGGTCGCAC----TGCTTTG-CGAACCC-AGGCGGTCAA-ACAAATT Sophora_davidii_S26 GTCG-TGGGCAGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCAC{AG}---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCG{AG}CACTA---GGGGGAC-CGAGGC{AG}CCACGCACCTC--GAG-CCGCACCC-AGGCGGTCAA-ACAAATTCGCGGGTCGCAC----TGCTTTG-CGATGAGGATT Sophora_davidii_S27 GTCG-TGGGCAGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCAC{AG}---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGCGGTCGA-ACAAATTCGCGGGTCGCAC----TGCTTTG-CGA----TGCT Sophora_davidii_S28 GTCG-TGGGCAGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCACG---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGCGGTCGA-ACAAATTCGCGGGTCGCAC----TGCTTTG-CGA-AGGCGGT Sophora_davidii_S29 GTCG-TGGGCAGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCACG---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCC{AG}TGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGCGGTCGA-ACAAATTCGCGGGTCGCAC----TGCTTTG-CGAGGATTCGA Sophora_davidii_S3 GTCG-TGGGCGGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGC{AG}C{AG}---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGCGGTCGA-ACAAATTCGCGGGTCGCAC----TGCTTTG-CGA---TGCTT Sophora_davidii_S30 GTCG-TGGGCAGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCACG---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCC{AG}TGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGC{AG}ACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTA-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TCGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGC{CT}G-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGCGGTC{AG}A-ACAA Sophora_davidii_S31 GTCG-TGGGCAGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCACG---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCC{AG}TGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAA-TAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGCGGTCAA-ACA{AG}ATTCGCGGGTCGCAC----TGCTTTG-CGA---TGCTT Sophora_davidii_S32 GTCG-TGGGCAGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--GTCG-TGGGCAGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACAATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCACG---------CTCCACCACT-----CAACCACCA-TCCATCG--CGGCACG---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACGAAG---CCAACA-TTCGCC-CC-TTTGCC{AG}TGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTATCGATGGT Sophora_davidii_S33 -ACAGATTCGCGGGTCGCAC----TGCTTTG-CGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Sophora_davidii_S34 GTCG-TGGGCAGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCACG---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCTG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAA-TAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCACCACGCACCTC--GAG-CCGCACCC-AGGCGGTCAA-ACAGATTCGCGGGTCGCAC----TGCTTTG-CGA-CGAGGAT Sophora_davidii_S35 GTCG-TGGGCAGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCACG---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCGTGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCTG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAA-TAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGCGGTCAA-ACAGATTCGCGGGTCGCAC----TGCTTTG-CGAGGATTCGA Sophora_davidii_S36 GTCG-TGGGCAGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCACG---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCGTGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACC{AG}TCTCCGG-----GCCGACGAGGGCGTGCTG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAA-TAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGCGGTCAA-ACAGATTCGCGGGTCGCAC----TGCTTTG-CGAGGATTCGA Sophora_davidii_S4 GTCG-TGGGCGGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGC{AG}CA---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG---GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGCGGT Sophora_davidii_S5 GTCG-TGGGCGGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGC{AG}CA---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGCGGTCAA-ACAAATTCGCGGGTCGCAC----TGCTTTG-CGACGA--TGG Sophora_davidii_S6 GTCG-TGGGCGGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCGCA---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCCCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGC Sophora_davidii_S7 GTCG-TGGGCGGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCACA---------CTCCACCACGG--{AG}CTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGCGGTCGA-ACAAATTCGCGGGTCGCAC----TGCTTTG-CGAGGATTCGA Sophora_davidii_S8 GTCG-TGGGCGGCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCACA---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGCGGTCGA-ACAAATTCGCGGGTCGCAC----TGCTTTG-CGA-GAGTAGT Sophora_davidii_S9 GTCG-TGGGC{AG}GCCAAC-GGCCG--C-TCGTGGG-TCATGGAGTCCCA--AATCCGGTAGGGGCG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCACA---------CTCCACCACGG--ACTCGATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTTGCCATGCCTTGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCTCCGG-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAAATAGGCCG--GG-AGGGG-------------CCCTCACGA-GGAGGGC-ACCG--CCCGGCACTA---GGGGGAC-CGAGGCGCCACGCACCTC--GAG-CCGCACCC-AGGCGGTC{AG}A-ACAAATTCGCGGGTCGCAC----TGCTTTG-CGA----TGCT Sophora_flavescens GTCG-TGGGCAGCCAAC-GGCCG--C-TCATGGG-TCAAAGAGTCACA--AATCCGGTAGGGGTG--ACA--CACACGATCG-GT--CTCGAGCTCTTACT-----CAACCACCA-TCCATCG--CGGCGCA---------CTCCACCACGG--ACTCAATTTT-C-AGCCA---ACCGCGAGG-CATCGC--TCAC-GGGAAG---CCAACA-TTCACC-CC-TTTACTATGCCTAGCA--------ACAGGGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCAGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACACTTGTCGCAACGCC-ACC-------ACACGGGCACCGTCTCCGGT----GCCGAGGGGGACGCACTA-GA------CAA--TCTCGAT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAA-TGGGCCA--GG-ATGGG-------------CCCGCACGA-GGAGGGC-ACCT--CCCAACACTT---GGGGGAC-CGAGGCACCATGCACCTC--AAG-CCGC----TGCTT-G-CGAACCC-AAGGAGTCAA-ACAAATTCACGGGTCGCAC----TGCT Sophora_moorcroftiana_ GTCG-TGGGCAGCCAAC-GGCCG--C-TCATGGG-TCATGGAGTCCCA--AATCCGGTAGGGGTG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCACA---------CTCCACCACGG--ACTCAATTTTC--AGCCA---ACCGTGAGGGCATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CC-TTCGCTATGCCTTGCA--------ACAGGGCCGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACGCGTGTCGCAACGCC-ACC-------GCAC-GGCACCGTCT-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--CCGG-----GCCGACGAGGGCGTGCTG-GA------CAA--TCTCTGT--T-TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAA-TAGGCCG--GG-AGGGG-------------CCCTCACGA-GGATGGC-ACCT--CCCGACACTA---GGGGGAC-CGAGGCGCCATGCACCAC--GAG-CCGCACCC-AGGCGGT Sophora_tomentosa ATCT-TGGGCAGCCAAC-TGCCG--C-TTATGGG-TCAAAGAGTCCCA--AATCCAGTAGGGGTG--ACA--CACACGACCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCACCG--CGGCGCA---------CTCCACCACGA--GCTCAATTTTTC-AGCCA---ACCATGAGG-CATCGC--TCAC-GGGAAG---CCAACA-TTCGCC-CC-TTTACTATGCCTAGCA--------ACAGCGCTGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTA-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TCGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TTTTGGATACACATGTCGCAACGCC-ACC-------ACACAGTCATCGTCT-----GCCGACGAGGGCGTGCCG-GA------CAA--TCTCTGT--CCGA-----GCCGACGGGGGCGTGCTA-GG------CAA--TCTCGAT--T-TCCTTG-----GCGCATT-CGGCGCCC----GGTTTT-TGTTAA-TGGGCCA--AG-AGGGG-------------CCCGCACGA-GGAGGGC-ACCT--CCCAACACTA---GGGGGAC-CG Sophora_tonkinensis GTCG-TGGGCAGCCAAC-GGCCG--C-TCATGGG-TCAAAGAGTCCCG--GATCCGGTAGGGGTG--ACA--CACACGATCG-GT--CTCGAGCTTTTACT-----CAACCACCA-TCCATCG--CGGCGCA---------CTCCACCACGG--ACTCAAATTTC--AGCCA---ACCGTGAGG-CATCGC--TCGC-GGGAAG---CCAACA-TTCGCC-CT--TTACCATGCCTGGCA--------ACAGGGCCGAGG-CATTGGG-------GCAACGATGTGCGACACCCAGGCAGGC-GTGCCCTCGGC--CTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-TACC-------GCAC-GGCACCGTCTTTTGGATACGCGTGTCGCAACGCC-ACC-------ACACAGGCACCGTCTCCGG-----GCCGACGGGGGCGCACTA-GA------CAA--TATCGAT--T-TCCTTG-----GCACCTC-CGGCGCCG----GGGTTT-TGTTAA-TAGGCCG--GG-AGGGG-------------CCCGCACGA-GGAGGGC-ACCT--CCCGACACCA---GGGGGAC-CGAGGCGCCATGCACCCC--AAG-CCGCACCC-GAGCAGTCAA-ACAAATTCGCGGGTCGC Thermopsis_alpina_ GTCA-TGGGCGACGAACAAGACG--C-CCATGGG-TCACAAAGTCCC--AAATCCGGCACGAGTG--ACG--CGCACAATCA-AT--CTCGAGCTTTTACT-----CAACCACCA-TCAATCG--CGGCGC---------CCTCCACCACGG--ACTCAATTTTTC-AACCA---ACCGTGAGA-CCTTGC--TCGCGGGA-AG---CCAACA-TTC---GCCCCACTCAAAGCCTAGC---------ACAAGGC-TGAGGAATTGG------GGGCAACGATGTGCGACGCCCAGGCAGGC-GTGCCCTCGAC--CTGATGGCGTCGGGCGCAACTTGCGTTCAACGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-C-T-ACC-------GCAC-GGCACCGTCTTTGGGATATGTGTGTCACAACGCC-GCC------CGCACCGACACCGTCTCCGGT----GCCAACTGGGGCGGACTA-GA------CAA--TCTTGA---TTTCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTGT-TAGGC---CAGGAGGAGA------------CCCACACAA-GGAGGGGCACCT---CCGACACAAG--AGGGGAC-CAAGGTGCCAAGCACCTC--TAG-CCAC-CGA-GAGGAGTCAA-ACAAATTCACGGGTCG Trifolium_repens_ GTAG-ATAGCGCACAGA-GGGCG--C-GTGTGGGGTCAGTAAGTCCA----TTATGTCCGGAGTCCCACA--GCCACGATTG-GT--CTCGAGCGTGGGCT-----CATCCACCG-A-TATCG--CGGGAGA---------CTCCGTCCCGA--ACTTGCTTTTC--AACCA---ACCACGAGA----AGGTCTCGC-GGGAGG---TCAACT-TCCACCACCCCCTGCTGCACATT-TA--------ATTAGTTAAGTG-TGGCGGGCAGGGGGGTGACGATGTGTGACACCCAGGCAGGC-GTGCCCTCAGC--CTAATGGCTTTGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCG-ATGCAAGAGCCGA-GATATCCGTTGCCGAGAGT-CATTTTACATA-ACATGTCGTCGTGAA-GGCA-----CCCGCGGGACACGTCCCTCG-----------GCTGCCTCACCT-AA------CAG-CTTCGTAT---TCCTTG-----GCGCATT-CGGCGCCG----GGGTTT-TGTTAA-TAG--TCCTTG-----GCGCATG-AAGCGCCG----GGGTTAGTGTTTTGTCGGGAG---ACACGGGCTTGCGACC---GGATGCACCG-AGTCGCCCGCCC--GCCCTCTCGAC--GACGCACACGGGAGGACGAGCCCCAG--CCG-TTGT----TGCTT ; END;