#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 13, 2024; 5:24 GMT

TreeBASE (cc) 1994-2008

Study reference:
Qiu Y., Li L., Wang B., Chen Z., Knoop V., Groth-malonek M., Dombrovska O., Lee J.,
Kent L., Rest J., Estabrook G., Hendry T., Taylor D., Testa C., Ambros M., Crandall-stotler
B., Duff R., Stech M., Frey W., Quandt D., & Davis C. 2006. The deepest
divergences in land plants inferred from phylogenomic evidence. Proceedings
of the National Academy of Sciences of the United States of America, null.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S1673]

BEGIN TAXA;
        TITLE  TaxonLabelSet12705;
        DIMENSIONS NTAX=16;
        TAXLABELS
            Anthoceros
            Arabidopsis
            Asplenium
            Chaetosphaeridium
            Chara
            Cycas
            Haplomitrium
            Huperzia
            Isoetes
            Marchantia
            Mesostigma
            Nicotiana
            Notothylas
            Phaeoceros
            Sphagnum
            Takakia
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M1696]

	TITLE Introns;
	LINK TAXA = TaxonLabelSet12705;
	DIMENSIONS NCHAR=28;
	FORMAT DATATYPE=Standard SYMBOLS= "0 1" MISSING=? GAP= -;
	CHARSTATELABELS
		1  cox2i373,
		2  cox2i691,
		3  cox3i171,
		4  nad1i258,
		5  nad1i287,
		6  nad1i348,
		7  nad1i394,
		8  nad1i477,
		9  nad1i669,
		10  nad1i728,
		11  nad2i156,
		12  nad2i542,
		13  nad2i709,
		14  nad2i830,
		15  nad2i1282,
		16  nad4i461,
		17  nad4i548,
		18  nad4i976,
		19  nad4i1399,
		20  nad5i230,
		21  nad5i392,
		22  nad5i881,
		23  nad5i1242,
		24  nad5i1455,
		25  nad5i1477,
		26  nad5i1872,
		27  rnli827,
		28  rnsi1065,
		;

MATRIX
[                             10        20        ]
[                              .         .        ]
Anthoceros            ?10011000100101101?10101100?
Arabidopsis           0100001111111011011100011100
Asplenium             1?01001001?1??110101001101?0
Chaetosphaeridium     0000000000000000000000000000
Chara                 0000000000000000010000000000
Cycas                 1?0????1?1?????1???1000???00
Haplomitrium          00?000000000100010000000001?
Huperzia              1110001111????0??0??101?1?00
Isoetes               000000100?111101001?00111000
Marchantia            0010000000001000100000000011
Mesostigma            0000000000000000000000000000
Nicotiana             1000001111111011011100011100
Notothylas            11?0110001??????????????1?00
Phaeoceros            ???0110001001011010?????1?00
Sphagnum              1100100001100001000100010000
Takakia               11?0100001100001000?000???00
;
END;