#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 12, 2024; 16:18 GMT TreeBASE (cc) 1994-2008 Study reference: García M., & Martin M.P. 2007. Phylogeny of Cuscuta subgenus Cuscuta (Convolvulaceae) based on nrDNA ITS and chloroplast trnL sequences. Systematic Botany, null. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S1750] BEGIN TAXA; TITLE Strict_consensus; DIMENSIONS NTAX=64; TAXLABELS Cuscuta_abyssinica Cuscuta_angulata Cuscuta_approximata_1 Cuscuta_approximata_2 Cuscuta_approximata_3 Cuscuta_babylonica_1 Cuscuta_babylonica_2 Cuscuta_balansae_1 Cuscuta_balansae_2 Cuscuta_balansae_3 Cuscuta_balansae_4 Cuscuta_capitata_1 Cuscuta_capitata_2 Cuscuta_castroviejoi_1 Cuscuta_castroviejoi_2 Cuscuta_corsicana Cuscuta_epilinum Cuscuta_epithymum_1 Cuscuta_epithymum_2 Cuscuta_epithymum_3 Cuscuta_epithymum_4 Cuscuta_europaea_1 Cuscuta_europaea_2 Cuscuta_europaea_3 Cuscuta_haussknechtii Cuscuta_japonica Cuscuta_kotschyana_1 Cuscuta_kotschyana_2 Cuscuta_kotschyana_3 Cuscuta_kurdica Cuscuta_lupuliformis Cuscuta_macranthera_1 Cuscuta_macranthera_2 Cuscuta_monogyna Cuscuta_natalensis_1 Cuscuta_natalensis_2 Cuscuta_nitida_1 Cuscuta_nitida_2 Cuscuta_nivea Cuscuta_palaestina_1 Cuscuta_palaestina_2 Cuscuta_pedicellata_1 Cuscuta_pedicellata_2 Cuscuta_planiflora_1 Cuscuta_planiflora_2 Cuscuta_planiflora_3 Cuscuta_planiflora_4 Cuscuta_planiflora_5 Cuscuta_planiflora_6 Cuscuta_planiflora_7 Cuscuta_planiflora_8 Cuscuta_planiflora_9 Cuscuta_pretoriana_1 Cuscuta_pretoriana_2 Cuscuta_pulchella_1 Cuscuta_pulchella_2 Cuscuta_pulchella_3 Cuscuta_rausii Cuscuta_rhodesiana Cuscuta_somaliensis_1 Cuscuta_somaliensis_2 Cuscuta_somaliensis_4 Cuscuta_triumvirati_1 Cuscuta_triumvirati_2 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M1766] TITLE Cuscuta_trnL; LINK TAXA = Strict_consensus; DIMENSIONS NCHAR=469; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Cuscuta_abyssinica ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGACTCTATTAAAGTCAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTTATATTTTGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A Cuscuta_angulata ACTTAATTGGATTGAGCCTTGGTATGGAAACTTACTAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAGAAATAA-AAGGGGCAATCCTGATCCAAATCCGGTTTTT--------GAAAAACTGAAGAAATGAAGAAA-----------AAAGGATAGGTGCAGAGACTCAACGGAAGCTTTTCTCAAAAATGC-AGGAGTATTATATAAAGT------------------------------------------------------------CTTATAGT-CTAGTCGGAGAAATAT-GTTGCCGAA-----CTTATTCATA----TAACATCTCAATCGCACGAGAATAAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAACAATGAAAGTTTTAGTAATAGG--AAAATCCGTCGATTTTAAAAATCGTGAGGGTTCAAGTC?AAAAA?A?ACACAAA Cuscuta_approximata_1 ACTTAATTAGATTGGGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTC----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGACTCTATTAAAGTAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAGATTTCTATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A Cuscuta_approximata_2 ACTTAATTAGATTGGGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTC----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGACTCTATTAAAGTAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAGATTTCTATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCA-GTC???CAAAACAAC???A Cuscuta_approximata_3 ACT-AATTAGATTGGGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTC----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGACTCTATTAAAGTAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAGATTTCTATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A Cuscuta_babylonica_1 ACTTAATTAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGAAACCCCGGAATTAATAA-AAGGGGCAATCCTGAGCCAAATCCTTTTTT---------TAAAAACTGA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCGGTTCTAAAAAATGG-AGTTGACTCTATGAAAGTAAACTAACGACTTTAATATTCATCGAATGAATTCAATGA-------ATTGAATGATTCACTCCATAAAAAAATTCTGATATATAT-TTTTA-------------------------------GAATCGGACAAGAATCAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAAAA?????C Cuscuta_babylonica_2 ACTTAATTAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGAAACCCCGGAATTAATAA-AAGGGGCAATCCTGAGCCAAATCCTTTTTT---------AAAAAACTGA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCGGTTCTAAAAAATGG-AGTTGACTCTATGAAAGTAAACTAACGACTTTAATATTCATCGAATGAATTCAATGA-------ATTGAATGATTCACTCCATAAAAAAATTCTGATATATAT-TTTTA-------------------------------GAATCGGAAAAGAATCAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTT-AAGTC???CAAAAAA?????C Cuscuta_balansae_1 ACTTAATTAGATTGGGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTC----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGATGTTCTAACAAAGGG-ATTTGACTCTATTAAAGTAAACTAACTACTTCAATATTCATTGAATTTATC----------------AAATGATTAATTCCATAAT-AGATTCTGAGATTTCTATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A Cuscuta_balansae_2 ACTTAATTAGATTGGGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTC----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGACTCTATTAAAGTAAACTAACTACTTCAATATTTATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTTAGATTTCTATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A Cuscuta_balansae_3 ACTTAATTAGATTGGGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTC----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGACTCTATTAAAGTAAACTAACTACTTCAATATTTATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTTAGATTTCTATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A Cuscuta_balansae_4 ACTTAATTAGATTGGGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTC----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAATAAAGGG-ATTTGACTCTATTAAAGTAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTATGAGATTTCTATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A Cuscuta_capitata_1 ACTTAATAAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGAAATCCCGGAATTAATAATAAGGGGCAATCCTGAGCCAAATCCTTTTTTTT-------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAAAAAATGG-AGTTGACTCTATTAAAGTCAACTAACGACTTTAATATTCATT-------------------------GAATGATTAACTCCATAAT-AGATTATGATAGATAT-TTTTACGAA-----ATTATT-ATA--------TTATAAATTGGACAAGAATAAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAACA?ACA??CA Cuscuta_capitata_2 ACTTAATAAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGAAATCCCGGAATTAATAATAAGGGGCAATCCTGAGCCAAATCCTTTTTTTTT------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAAAAAATGG-AGTTGACTCTATTAAAGTCAACTAACGACTTTAATATTCATT-------------------------GAATGATTAACTCCATAAT-AGATTATGATAGATAT-TTTTACGAA-----ATTATT-ATA--------TTATAAATTGGACAAGAATAAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAACA?ACA??CA Cuscuta_castroviejoi_1 ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATTCTTTTT----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGACTCTATTAAAGTCAACTAACTACTTAAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTTTTATTTTGATTTTATGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A Cuscuta_castroviejoi_2 ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATTCTTTTT----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAG----------TCTATTAAAGTCAACTAACTACTTAAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTTTTATTTTGATTTTATGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A Cuscuta_corsicana ACTTAATTAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTG----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTATTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTTAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A Cuscuta_epilinum ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTGTTT----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAATGGAAGCTGTTCTAACAAAGGT-ATTTGAC----------TAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACGAAGCAAACTTCT-----------------GAATGCGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A Cuscuta_epithymum_1 ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTG----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTATTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTTAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A Cuscuta_epithymum_2 ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTG----------AAAAAACTGA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTATTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTTAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A Cuscuta_epithymum_3 ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTG----------AAAAAACTGA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTATTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTTAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A Cuscuta_epithymum_4 ACTTAATTAGATTGAGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTTTTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTCAATATTCATTGAATTTATTGAATCATTAATTTATTGAATCATTAATTCCATAAT-AGATTCTGAATTTTGGATTTTACGAACCAAACTTCT-----------------TAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTGAAAAATCGTGAGGGTTCAAGTC???CAAACAAAC???A Cuscuta_europaea_1 ACTTAATTAGATTGGGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTG----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAAGG-ATTTGACTCTATTAAAGTCAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGATATTTCTATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A Cuscuta_europaea_2 ACTTAATTAGATTGGGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTG----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAAGG-ATTTGACTCTATTAAAGTCAACTAACTACTTCAATATTCATTGAATTTATT----------------AAATCATTAATTCCATAAT-AGATTCTGATATTTCTATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A Cuscuta_europaea_3 ACTTAATTAGATTGGGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTG----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAAGG-ATTTGACTCTATTAAAGTCAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGATATTTCTATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A Cuscuta_haussknechtii ACTTAATTTGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGAAACCCCGGAATTAATAA-AAGGGGCAATCCTGAGCCAAATCCTTTTTC---------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAAAAAATGG-AGTTGACTCT---------------------------------------------------------GAATGATTAACTCCATATATAGATTATGATAGATAT-TTTTACGAA-----CTTATT-ATATATTATA-TTATA-ATCGGACAAGAATAAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAC?A?ACAAAAA Cuscuta_japonica ACTTAATTGGATTGAGCCTTGATATGGAAACGTACTAAGTGATAACTTTCAAATTCAGAGAAACCCTGGAATTAAAAAGAAGGGGCGATCCTGAGCCAAATCCTGTTTTACAAATTTCCAAAAACAAACAAAAGT------------TTAAAAAAGGATAGGTGCAGAGACTCAACGGAAGATGTTCTAACAAATGG-AGTTTATTCTGTGATATTGAAGTAAAGG----AATATTCATTGAATTTGTT----------------AAAAAATTCACTGCATAGT-CTAGTCTTAAAGCTAT-TTTTACGAA-----CTTAT-----------------AAAAAATACGAGAATAAAGATAGAGTCCTTTATCTATATGTCAAGACGGGCAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTCCAAAAAAAAACC???A Cuscuta_kotschyana_1 ACTTAATTAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGAAACCCCGGAATTAATAA-AAGGGGCAATCCTGAGCCAAATCCTTTTTT---------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAAAAAATGG-AGTTGACTCT---------------------------------------------------------GAATGATTAACGCCATAAT-AGATTATGATAGATAT-TTTTACGAA-----CTTCTT-ATA-------TTTATA-ATCGGACAAGAATAAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAC?A?ACA?CAA Cuscuta_kotschyana_2 ACTTAATTAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGAAACCCCGGAATTAATAA-AAGGGGCAATCCTGAGCCAAATCCTTTTTT---------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAAAAAATGG-AGTTGACTCT---------------------------------------------------------GAATGATTAACGCCATAAT-AGATTATGATAGATAT-TTTTACGAA-----CTTCTT-ATA-------TTTATA-ATCGGACAAGAATAAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAC?A?ACA?CAA Cuscuta_kotschyana_3 ACTTAATTAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATTACTTTCAAATTCAGGGAAACCCCGGAATTAATAA-AAGGGGCAATCCTGAGCCAAATCCTTTTTT---------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAAAAAATGG-AATTGACTCT---------------------------------------------------------GAATGATTAACTCCATAAT-TGATTATGATAGATAT-TTTTACGAA-----CTTATT-ATATTTATAATTTATA-ATCGGACAAGAATAAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAATAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAC?A?ACAAAAA Cuscuta_kurdica ACTTAATTAGATTGGGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------CAAAAACTGA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGACT---------TCAACTAACTACTTCAATA---------TTTATT----------------GAATCATTAATTCCATAAT-AGATTATGAGATTTCTATTTTACCAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A Cuscuta_lupuliformis ACTTAATTGGATTGAGCCTTGATATGGAAACGTAATAAGTGAGAACTTTCAAATTCAGAGAAACCCTGGAATTAATAAGAAGGGGCGATCCTGAGCCAAATCCTGTTTTACAAATTTAGAAAACCAAACAAAAGT------------TTAAAAAAGGATAGGTGCAGAGACTCAACGGAAGATGTTCTAACAAATGG-AGTTTACT-----ATATTGAAGTAAAGG----AATATTCATTTAAT-----------------AAAAAAAAAATTCACTGCATAGT-CTAGTCTTAAAGCTAG-TTTTACGAA-----CTTAT-----------------AAAAAAGACGAGAATAAAGATAGAGTCCTTTATCTATATGTCAAGACGGGCAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGCCCAAAAAAAAACC???A Cuscuta_macranthera_1 ACTTAATTAGATTGGGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTC----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGACTCTATTAAAGTAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAGATTTCTATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A Cuscuta_macranthera_2 ACTTAATTAGATTGGGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTC----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGACTCTATTAAAGTAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAGATTTCTATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A Cuscuta_monogyna ACTTAATTGGATTGAGCCTTGATATGGAAACATACTAAGTGATAACTTTCAAATTCAGAGAAACCCTGGAATTAAAAATAAGGGGCGATCCTGAGCCAAATCCTGTTTTACAAATTTACAAAAACAAACAAAAGTGAAAAAAAAGTGAAAAAAAAGGATAGGTGCAGAGACTCAACGGAAGATGTTCTAACAAATGG-AGTTTACT--------------------------------TTGAATTTGTT----------------AAAAAATTCACTGCATAGT-CTAGTCTTAAAGATAT-TTTTACGAA-----CTTAT-----------------CAAAAAGACGAGAATAAAGATAGAGTCCTTT-TCTATATGTCAAGACGGACAAGAATGCAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTCAAAAAAAAAACC???A Cuscuta_natalensis_1 ACTTAATTGGATCGAGCCTTGGTATGGAAACTTATTAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAGAAATAA-AAGGGGCAATCCTGAGCCAAATCCGGTTTTT--------GAAAAACTGAAGAAAG------------------AAAGGATAGGTGCAGAGACTCAACGGAAGCTTTTCTAACAAATGC-AAGAGTATTATATATAGT---------------------------------------------------------------------CTAGTCGGAGAAATCT-TTTGCGGAA-----CTTCTTCATA----TAACATATAAATCGCACGAGAATAAAGATAGAGTCCTTTATCTATATGTAACTACGTACAACAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGATTTTTAAAATCGTGAGGGTTCAAGTC?CAACA?A?ACACAAA Cuscuta_natalensis_2 ACTTAATTGGATCGAGCCTTGGTATGG-AACTTATTAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAGAAATAA-AAGGGGCAATCCTGAGCCAAATCCGGTTTTT--------GAAAAACTGAAGAAAG------------------AAAGGATAGGTGCAGAGACTCAACGGAAGCTTTTCTAACAAATGC-AAGAGTATTATATATAGT---------------------------------------------------------------------CTAGTCGGAGAAATCT-TTTGCGGAA-----CTTCTTCATA----TAACATATAAATCGCACGAGAATAAAGATAGAGTCCTTTATCTATATGTAACTACGTACAACAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGATTTTAAAAATCGTGAGGGTTCAAGTC?CAACA?A?ACACAAA Cuscuta_nitida_1 ACTTAATTAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGAGAAACCCTGGAAGAAATAA-AAGGGGCAATCCTGAGCCAAATCCGGTTTTT--------GAAAAACTGAATAAA-------------------AAAGGATAGGTGCAGAGACTCAACGGAAGCTTTTCTAACAAATGC-AAGAGTCTTATATAGAGT---------------------------------------------------------------------CTAGTCAGAGAAATCT-TTTGCCGAA-----CTTCTTCATA----TAACATATAAATCGCACGAGAATAAAGATAGAGTCCTTTATCTACATGTAAATACATACAACAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGATTTTTAAAATCGTGAGGGTTCAAGTC??CACA?A?ACACAAA Cuscuta_nitida_2 ACTTAATTGGATTGAGCCTTGGTATGG-AACTTACTAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAGAAATAA-AAGGGGCAATCCTGAGCCAAATCCGGTTTTT--------GAAAAACTGAATAAA-------------------AAAGGATAGGTGCAGAGACTCAACGGAAGCTTTTCTAACAAATGC-AAGAGTCTTATATAGAGT---------------------------------------------------------------------CTAGTCAGAGAAATCT-TTTGCCGAA-----CTTCTTCATA----TAACATATAAATCGCACGAGAATAAAGATAGAGTCCTTTATCTACATGTAAATACATACAACAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGATTTTTAAAATCGTGAGGGTTCAAGTC??CACA?A?ACACAAA Cuscuta_nivea ACTTAATTAGATTGAGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATTCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTATTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAATTTTGGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGGAGAAAATCCGTCGACTTGAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A Cuscuta_palaestina_1 ACTTAATTAGATTGGGCCTTGGTATAGAACCTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTCAATATTCATTCAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A Cuscuta_palaestina_2 ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTCAATATTCATTCAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A Cuscuta_pedicellata_1 ACTTAATTAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGAAACCCCGGAATTAATAA-AAGGGGCAATCCTGAGCCAAATCCTTTTTT---------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAATGGAAGCTGTTCTAAAAAATAG-AGTTGACTCT---------------------------------------------------------GAATGATTAACTCCATAAT-AGATTATGATAGATAT-TTTTACCAA-----CTTATT-ATA-------TTTATA-ATCGGACAAGAATAAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAC?A?ACA?CAA Cuscuta_pedicellata_2 ACTTAATTAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGAAACCCCGGAATTAATAA-AAGGGGCAATCCTGAGCCAAATCCTTTTTT---------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAATGGAAGCTGTTCTAAAAAATAG-AGTTGACTCT---------------------------------------------------------GAATGATTAACTCCATAAT-AGATTATGATAGATAT-TTTTACCAA-----CTTATT-ATA-------TTTATA-ATCGGACAAGAATAAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAC?A?ACA?CAA Cuscuta_planiflora_1 ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTCAATATTCATTCAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGACAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A Cuscuta_planiflora_2 ACTTAATTAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTCAAAATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-------------TTCGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCCAC???A Cuscuta_planiflora_3 ACTTAATTAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTCAAAATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-------------TTCGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCCAC???A Cuscuta_planiflora_4 ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGA-ATTTGAT----------TAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTCATTCCATAAT-AGATTCTGAAATTTTGATTTTACGAACCAAACTTCT-----------------GAATCGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATAAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A Cuscuta_planiflora_5 ACTTAATTAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGA-ATTTGAC----------TAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTCATTCCATAAT-AGATTCTGAAATTTTGATTTTACGAACCAAACTTCT-----------------GAATCGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATAAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A Cuscuta_planiflora_6 ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTCAAAATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-------------TTCGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCCAC???A Cuscuta_planiflora_7 ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTCAATATTCATTCAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGCGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A Cuscuta_planiflora_8 ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTG----------AAAAAACTGA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTATTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTTAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A Cuscuta_planiflora_9 ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTGTTT----------CAAAAACTTA-------------------------AAGGATAGGCGCAGAGACTCAATGGAAGCTGTTCTAACAAAGGT-ATTTGAC----------TAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACGAAGCAAACTTCT-----------------GAATGCGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A Cuscuta_pretoriana_1 ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAAGAAAGGG-ATTTGACTCTATTAAAGTCAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTTATATTTTGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAAG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A Cuscuta_pretoriana_2 ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAAGAAAGGG-ATTTGACTCTATTAAAGTCAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTTATATTTTGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAAG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A Cuscuta_pulchella_1 ACTTAATTAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGAAACCCCGGAATTAATAA-AAGGGGCAATCCTGAGCCAAATCCTTTTTT---------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTTTTCTAAAAAATGG-AGTTGACTCT---------------------------------------------------------TAATGATTAACGCCATAAT-AGATTATGATAGATAT-TTTTACGAA-----CTTATT-ATA-------TTTATA-ATCGGACAAGAATAAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAC?A?ACA?CAA Cuscuta_pulchella_2 ACTTAATTAGATCGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGAAACCCCGGAATTAATAA-AAGGGGCAATCCTGAGCCAAATCCTTTTTT---------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTTTTCTAAAAAATGG-AGTTGACTCT---------------------------------------------------------TAATGATTAACGCCATAAT-AGATTATGATAGATAT-TTTTACGAA-----CTTATT-ATA-------TTTATA-ATCGGACAAGAATAAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAC?A?ACA?CAA Cuscuta_pulchella_3 ACTTAATTAGATCGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGAAACCCCGGAATTAATAA-AAGGGGCAATCCTGAGCCAAATCCTTTTTT---------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTTTTCTAAAAAATGG-AGTTGACTCT---------------------------------------------------------TAATGATTAACGCCATAAT-AGATTATGATAGATAT-TTTTACGAA-----CTTATT-ATA-------TTTATA-ATCGGACAAGAATAAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAC?A?ACA?CAA Cuscuta_rausii ACTTAATTAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGA-ATTTGAC----------TAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTTGATTTTACGAACCAAACTTCT-----------------TAATCGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A Cuscuta_rhodesiana ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAAGAAAGGG-ATTTGACTCTATTAAAGTCAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTTATATTTTGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAAG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A Cuscuta_somaliensis_1 ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGACTCTATTAAAGTCAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTTATATTTTGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAAG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A Cuscuta_somaliensis_2 ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGACTCTATTAAAGTCAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTTATATTTTGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAAG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A Cuscuta_somaliensis_4 ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAAGAAAGGG-ATTTGACTCTATTAAAGTCAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTTATATTTTGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGAAAGAAG--AAAATCCGTCGACCTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A Cuscuta_triumvirati_1 ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAATGGAAGCTGTTCTAATAAAGGGGATTTGAC----------TAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACGAACCAAACTTCT-----------------AAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A Cuscuta_triumvirati_2 ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAATGGAAGCTGTTCTAATAAAGGGGATTTGAC----------TAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACCAACCAAACTTCT-----------------AAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A ; END; BEGIN SETS; CHARSET gaps (CHARACTERS = Cuscuta_trnL) = 454-469; CHARSET trnL (CHARACTERS = Cuscuta_trnL) = 1-453; END;