Matrix 17839 of Study 14460
Matrices
Title: Diplodia ITS+EF Character Matrix
Description: ITS EF1-alpha
Rows
Taxon Label | Row Segments | Characters 1?–30 |
---|---|---|
Diplodia corticola CBS 112547 | (none) | GATCATTACCGAGTGCTACGAGCGAGAGCT |
Diplodia corticola CBS 112549 | (none) | GATCATTACCGAGTGCTACGAGCGAGAGCT |
Diplodia corticola BL7 | (none) | GATCATTACCGAGTGCTACGAGCGAGAGCT |
Diplodia corticola BL11 | (none) | GATCATTACCGAGTGCTACGAGCGAGAGCT |
Diplodia quercivora CBS 133852 | (none) | GATCATTACCGAGTGCTACGAGCGAAAGCT |
Diplodia quercivora CBS 133853 | (none) | GATCATTACCGAGTGCTACGAGCGAAAGCT |
Diplodia fraxini CAD009 | (none) | GATCATTACCGAGTTCT-CGAGCTTCGGCT |
Diplodia fraxini CAD010 | (none) | GATCATTACCGAGTTCT-CGAGCTTCGGCT |
Diplodia fraxini CAD007 | (none) | GATCATTACCGAGTTCT-CGAGCTTCGGCT |
Diplodia fraxini CAD008 | (none) | GATCATTACCGAGTTCT-CGAGCTTCGGCT |
Diplodia fraxini CAD003 | (none) | GATCATTACCGAGTTCT-CGAGCTTCGGCT |
Diplodia fraxini CAD004 | (none) | GATCATTACCGAGTTCT-CGAGCTTCGGCT |
Diplodia fraxini CAD005 | (none) | GATCATTACCGAGTTCT-CGAGCTTCGGCT |
Diplodia fraxini CAD006 | (none) | GATCATTACCGAGTTCT-CGAGCTTCGGCT |
Diplodia fraxini CAD001 | (none) | GATCATTACCGAGTTCT-CGAGCTTCGGCT |
Diplodia fraxini CAD002 | (none) | GATCATTACCGAGTTCT-CGAGCTTCGGCT |
Diplodia fraxini BL137 | (none) | GATCATTACCGAGTTCT-CGAGCTTCGGCT |
Diplodia fraxini BL138 | (none) | GATCATTACCGAGTTCT-CGAGCTTCGGCT |
Diplodia fraxini BL135 | (none) | GATCATTACCGAGTTCT-CGAGCTTCGGCT |
Diplodia fraxini BL136 | (none) | GATCATTACCGAGTTCT-CGAGCTTCGGCT |
Diplodia fraxini CMW7060 | (none) | GATCATTACCGAGTTCT-CGAGCTTCGGCT |
Diplodia fraxini BL16 | (none) | GATCATTACCGAGTTCT-CGAGCTTCGGCT |
Diplodia fraxini BL70 | (none) | GATCATTACCGAGTTCT-CGAGCTTCGGCT |
Diplodia mutila PD73 | (none) | ---CATTACCGAGTTCT-CGGGCTTCGGCC |
Diplodia mutila PD75 | (none) | ---CATTACCGAGTTCT-CGGGCTTCGGCC |
Diplodia mutila PD46 | (none) | ---CATTACCGAGTTCT-CGGGCTTCGGCC |
Diplodia mutila PD61 | (none) | ---CATTACCGAGTTCT-CGGGCTTCGGCC |
Diplodia mutila STEU5038 | (none) | -ATCATT-CCGAGTTCT-CGGGCTTCGGCC |
Diplodia mutila UCD288Ma | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCC |
Diplodia mutila BL98 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCC |
Diplodia mutila CAA507 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCC |
Diplodia mutila CAA510 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCC |
Diplodia mutila CBS112553 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCC |
Diplodia mutila CAA115 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCC |
Diplodia mutila = Physalospora mutila CBS 302.36 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCC |
Diplodia mutila CBS 230.30 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCC |
Diplodia mutila STEU5824 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCC |
Diplodia mutila CAA408 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCC |
Diplodia mutila CAA410 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCC |
Diplodia mutila CAA096 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCC |
Diplodia agrifolia UCROK1429 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCC |
Diplodia agrifolia CBS 132777 | (none) | --TCATTACCGAGTTCT-CGGGCTTCGGCC |
Diplodia subglobosa CBS 124133 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia subglobosa CMW7776 | (none) | ---CATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia subglobosa CBS 124132 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia subglobosa CBS 124131 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia olivarum CAP301 | (none) | GATCATTACCGAGTTCT-CGAGCTTCGGCT |
Diplodia olivarum BL97 | (none) | GATCATTACCGAGTTCT-CGAGCTTCGGCT |
Diplodia olivarum CBS 121887 | (none) | GATCATTACCGAGTTCT-CGAGCTTCGGCT |
Diplodia rosulata CBS 116472 | (none) | GATCATTACCGAGTCCT-CGAGCTTCGGCT |
Diplodia rosulata CBS 116470 | (none) | GATCATTACCGAGTCCT-CGAGCTTCGGCT |
Diplodia africana CBS 120835 | (none) | GATCATTACCGAGTTCT-CGAGCTTCGGCT |
Diplodia africana DA1 | (none) | GATCATTACCGAGTTCT-CGAGCTTCGGCT |
Diplodia africana CBS 121104 | (none) | GATCATTACCGAGTTCT-CGAGCTTCGGCT |
Diplodia malorum CBS 124130 | (none) | GATCATTACCGAGTTCT-CGAGCTCCGGCT |
Diplodia malorum BL126 | (none) | GATCATTACCGAGTTCT-CGAGCTCCGGCT |
Diplodia malorum BL127 | (none) | GATCATTACCGAGTTCT-CGAGCTCCGGCT |
Diplodia malorum CBS 112554 | (none) | GATCATTACCGAGTTCT-CGAGCTCCGGCT |
Diplodia seriata BL130 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia seriata BL131 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia seriata CBS 119049 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia seriata CBS 112555 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia seriata CAA502 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia intermedia CBS 112556 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia intermedia CAA147 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia pinea CBS 109725 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia pinea CBS 109943 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia scrobiculata CBS 109944 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia scrobiculata CBS 113423 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia scrobiculata CAP163 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia scrobiculata BL5 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia pinea CBS 393.84 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia pinea CBS 109727 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia pseudoseriata BL132 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia pseudoseriata BL133 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia pseudoseriata CBS 124906 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia alatafructa CBS 124933 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia alatafructa CBS 124931 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia pseudoseriata UY1263 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia allocellula CBS 130408 | (none) | -------------TTCT-CGGGCTTCGGCT |
Diplodia allocellula CBS 130410 | (none) | -------------TTCT-CGGGCTTCGGCT |
Diplodia bulgarica CBS 124135 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia bulgarica CBS 124254 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia cupressi CBS 261.85 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia cupressi CBS 168.87 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia cupressi BL102 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCT |
Diplodia tsugae CBS 418.64 | (none) | GATCATTACCGAGTTCT-CGGGCTTCGGCC |
Lasiodiplodia theobromae CBS 164.96 | (none) | GATCATTACCGAGTTTT-CGAGCTCCGGCT |
Lasiodiplodia theobromae CBS 124.13 | (none) | GATCATTACCGAGTTTT-CGAGCTCCGGCT |
Columns
None of the columns has a description.