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Matrix 17882 of Study 14332

About Citation title: "A phylogenetic analysis of morphological and molecular characters of Boraginaceae: Evolutionary relationships, taxonomy, and patterns of character evolution".
About Study name: "A phylogenetic analysis of morphological and molecular characters of Boraginaceae: Evolutionary relationships, taxonomy, and patterns of character evolution".
About This study is part of submission 14332 (Status: Published).

Matrices

Title: Boraginaceae Indels and Morphology

Rows

Taxon Label Row Segments Characters 1?–30
Vahlia capensis  (none) 0010010000011000000-0010000100
Alkanna orientalis  (none) ???000000000000010???000000000
Alkanna pinardii  (none) ??????????000000100???????????
Alkanna tinctoria  (none) ???0000000???????????000000000
Amsinckia tessellata  (none) ?000001010010000000??000100001
Anchusa aegyptiaca  (none) 00000001010101000000100000000?
Anchusa azurea  (none) 00000001010101000000100000000?
Anchusa capellii  (none) 000000010101000000000000000001
Anchusa capensis  (none) ?00000020101000000???000000001
Anchusa cespitosa  (none) 00000001010100000000000000000?
Anchusa crispa  (none) 000000210101000000000000000001
Anchusa formosa  (none) 000000010101000000000000000001
Anchusa leptophylla  (none) ?0000002010100000????????????1
Anchusa officinalis  (none) ?00000020101000000000000000001
Anchusa pusilla  (none) 100000010101000000000000000001
Anchusa stylosa  (none) 100000010101000000000000000001
Anchusa thessala  (none) 000000010101000000000000000001
Anchusa undulata  (none) 00000001010100000000000000000?
Antiphytum floribundum  (none) ????-----------------????????0
Arnebia benthami  (none) ????000000000000?0???000000000
Brandella sp.  (none) ??0000300001000120110?????????
Borago morisiana  (none) 000000000101000000000000000001
Borago officinalis  (none) ?000000001010000?????000000002
Borago pygmaea  (none) 00000000010100000000000000000-
Borago trabutii  (none) 000000000101000000000000000002
Bourreria succulenta  (none) 00100000000100000002001000000?
Brunnera orientalis  (none) ?00000000101000030???000000000
Buglossoides arvensis  (none) 0010010000000000-0000000000000
Buglossoides purpureo-caeruleum  (none) ????010000???????????000000000
Buglossoides tenuiflora  (none) 0010010000000000-0030000000000
Cordia boissieri  (none) ??????-00001001000020?????????
Cryptantha crassipes  (none) ?0000-30100100000????000100001
Caccinia strigosa  (none) ??100-??00010000000??000000000
Cerinthe alpina  (none) ??????????000000-00???????????
Cerinthe major  (none) ?010000000000000-0???000000000
Cordia sinensis  (none) 0010000???01001030020010001000
Cordia dentata  (none) 001000000001001000020020001000
Cordia myxa  (none) 001000000001001030020020001000
Cryptantha C308  (none) ?100003010010????????000100001
Cryptantha bakeri  (none) 210000301001000000010000100001
Cryptantha crassisepala  (none) 000000301001000000010000100001
Cryptantha flavoculata  (none) 210000301001000000010000100001
Cryptantha peruviana  (none) 000000301001000000010000100001
Cryptantha pterocarya  (none) 000000101001000000010000100001
Cynoglossum LHMS  (none) ????003000010????????00100200?
Cynoglossum amabile  (none) ?000003000010001000??001002000
Cynoglossum javanicum  (none) ??00003000010001000??001002000
Cynoglossum officinale  (none) 000000300011000100?10001000001
Cynoglossum pringlei  (none) ?000003010010000000??000100000
Cynoglottis barrelieri  (none) 000000010101000000000000000001
Cynoglottis chetikiana  (none) 000000010101000000000000000001
Cystostemon heliocharis  (none) ??10000??????????????000000000
Echium aculeatum  (none) 0000000000000000-00?0000000000
Echium angustifolium  (none) 0000000000000000-0000000000000
Echium bonnetii  (none) 0000000000000000-0?00000000000
Echium candicans  (none) ????0000000000????00??????????
Echium decaisnei  (none) 0000000000000000-00?0????????0
Echium italicum  (none) 0000000000000000-0000000000000
Echium leucophaeum  (none) 0000000000000000-0000000000000
Echium plantagineum  (none) 0000000000000000-0?00000000000
Echium wildpretii  (none) ?000000000000000-0?0?03000000?
Ehretia cymosa  (none) 00100000000100???????020000000
Eritrichium rupestre  (none) ???1000???011000?????00000000?
Glandora oleifolia  (none) ????010000000000-00??????????0
Glandora rosmarinifolia  (none) 0010010000000000-0102000000000
Hackelia micrantha  (none) ?011000???01000000???000000000
Hackelia virginiana  (none) ?011000???0100???????000000000
Halacsya sendtneri  (none) ??????????000000-100?????????0
Heliotropium aegyptiacum  (none) 001000000001000000020110000110
Huynhia pulchra  (none) ?010000000000000-0000000000000
Hydrophyllum canadense  (none) 0010000???010000000-0010000000
Lithospermum bejariense  (none) ?010010000000000-0002000000000
Lindelofia longiflora  (none) ?00000300001000130???001002000
Lindelofia macrostyla  (none) ??0000300001000130???001002000
Lithodora hispidula  (none) ????003000000000?????000000000
Lithodora zahnii  (none) ????000000??0????????????????0
Lithospermum distichum  (none) ????010000000000-0???000000000
Lithospermum leonotis  (none) ????010000000000-0????????????
Lithospermum multiflorum  (none) ????010000000000-0???000000000
Lithospermum nelsonii  (none) ????010000000000-0???????????0
Lithospermum officinale  (none) ????010000000000-0???000000000
Lobostemon fruticosus 48  (none) ????000000000000-0???000000000
Lycopsis arvensis  (none) 000000010101000000000000000001
Mairetis microsperma  (none) ??????????000000-10??????????0
Mertensia sp. C282  (none) ????00000001000000???000000000
Mertensia asiatica  (none) ????000000010000000??0-0000000
Mertensia ciliata  (none) ????000000010000000??000000000
Mertensia virginica  (none) ????000000020000-0???000000000
Moltkia angustifolia  (none) ??????????000000-00???????????
Moltkia aurea  (none) ??????????000000-00???????????
Moltkia caerulea  (none) ??????????000000-00???????????
Moltkia petraea  (none) ????000000000000-0???000000000
Moltkia suffruticosa  (none) ??????????000000-00??????????0
Moltkiopsis ciliata  (none) ??????????000000-10???????????
Myosotidium hortensia  (none) ??110000000100000????00000000?
Myosotis arvensis  (none) ???0000000???????????002000000
Myosotis sylvatica  (none) ????000000???????????00200000?
Neatostema apulum  (none) 0000000000000000-1000000000000
Nonea lutea  (none) ?00000000101000000???000000000
Nonea stenosolen  (none) 000000000101000000000000000000
Ogastemma pusillum  (none) ?010000000010000?????00000000?
Omphalodes cappadocica  (none) ????00000001000000???000000000
Omphalodes nitida  (none) ???10000000100003000000000000?
Omphalodes verna  (none) ?01100000001000000???000000000
Onosma alborosea  (none) ???????000000000-?????????????
Onosma echioides  (none) ??????????000000-00??????????0
Onosma graecum  (none) 0010000000000000-0000000000000
Onosma taurica  (none) 0010000000000000-0000000000000
Paracaryum intermedium  (none) ??0000300001000130010?????????
Paracaryum lithospermifolium  (none) 000000300011000130310001200001
Paracaryum racemosum  (none) ?00000300011000130???001200001
Paramoltkia doerfleri  (none) ???????000000000-?????????????
Pardoglossum cheirifolium  (none) ?0000030001100013????001000001
Pentaglottis sempervirens  (none) ??0000?001010000?????000000000
Phacelia tanacetifolia  (none) 0010000000010000000-001000000-
Phyllocara aucheri  (none) 000000010101010000001000000000
Pseudomertensia trollii  (none) ?011000000010000000??0000000?0
Pulmonaria obscura  (none) 000010000101000000000000000000
Pulmonaria officinalis  (none) ???01000010100000????00000000?
Symphytum asperum  (none) ??0000000101000000???000000003
Symphytum caucasicum  (none) ????0000010100000????00000000-
Symphytum ibericum  (none) ???00000010100000????000000003
Symphytum orientale  (none) ???00000010100000000000000000-
Symphytum peregrinum  (none) ?0000000010100000????00000000?
Tiquilia darwinii  (none) 01100000000100000002001000000?
Tiquilia paronychioides  (none) 01100000000100000002001000000?
Trachystemon orientalis  (none) ???00000010100000000000000000?
Trichodesma africanum  (none) ???????0000100?0?????0000?????
Trichodesma scotti  (none) ?0100000000100000????000010000
Trigonocaryum involucratum  (none) ?010000000010000300??200300000
Omphalodes aliena  (none) ?011000?000100000????000000000
Lepechiniella sp.  (none) ?0100000000100020????????????1
Asperugo procumbens  (none) ?????????????????????000000001
Suchteliana sp.  (none) ?010000?0001001000000?????????
Symphytum tuberosum  (none) ?0000000010100000????0???00003
Hormuzakia aggregata  (none) ?00000020101010000???000000000
Tournefortia laurifolia  (none) 0010000???010000000-0110000010
Lithospermum incisum  (none) ???????000000000-0002000000000
Pseudomertensia primuloides  (none) ?01100000001000000???000000001
Wellstedia dinteri  (none) ?0000?020-01000000??-010000??0
Brachybotrys paridiformis  (none) ?011000???????????????????????
Eritrichium aretioides  (none) ?011000??????????????000000001
Pseudomertensia moltkioides subsp. moltkioides  (none) ?011000???????????????????????
Eritrichium chamissonis  (none) ?01100000001000000???000000001
Eritrichium villosum  (none) ?011000??????????????000000001
Eritrichium sericeum subsp. sericeum  (none) ?011000??????????????????????1
Eritrichium splendens  (none) ?0110000000100000????000000001
Pseudomertensia echioides  (none) ?010000???????????????????????
Trigonotis formosana  (none) ?????????????????????????????1
Buglossoides incrassata  (none) ?????????????????????000000000
Heliotropium longistylum  (none) ?????????????????????110000110
Lappula redowskii  (none) ?????????????????????000000000
Lappula squarrosa  (none) ?????????????????????00000000?
Lithospermum macromeria  (none) ?????????????????????????????0
Myosotis alpestris  (none) ?????????????????????30000000?
Myosotis australis  (none) ?????????????????????30000000?
Myosotis discolor  (none) ?????????????????????30000000?
Myosotis macrantha  (none) ?????????????????????30000000?
Myosotis macrosperma  (none) ?????????????????????00000000?
Onosma stellulata  (none) ?????????????????????00000000?
Plagiobothrys albiflorus  (none) ?????????????????????00010000?
Podonosma orientalis  (none) ?????????????????????000000000
Tricardia watsonii  (none) ?????????????????????03000000?
Codon schenkii  (none) ?????????????????????010000001
Lappula texana  (none) ?????????????????????000000000
Chionocharis  (none) ?????????????????????0000100?-
Lasiocaryum munroi  (none) ??????????????????????????????
Amsinckia calycina  (none) ?????????????????????????????1
Anchusella variegata  (none) ?????????????????????????????1
Arnebia guttata  (none) ?????????????????????????????0
Bothriospermum tenellum  (none) ?????????????????????????????0
Echiochilon callianthum  (none) ??????????????????????????????
Echiochilon johnstonii  (none) ?????????????????????????????0
Echiochilon fruticosum  (none) ?????????????????????????????0
Echiostachys incanus  (none) ?????????????????????????????0
Echium vulgare  (none) ?????????????????????????????0
Elizaldia calycina  (none) ?????????????????????????????0
Gastrocotyle macedonica  (none) ?????????????????????????????1
Glandora diffusa  (none) ?????????????????????????????0
Hackelia floribunda  (none) ?????????????????????????????0
Lobostemon trigonus  (none) ?????????????????????????????0
Maharanga emodi  (none) ?????????????????????????????0
Melanortocarya sp.  (none) ?????????????????????????????-
Moritzia lindenii  (none) ?????????????????????????????0
Nonea pulla  (none) ?????????????????????????????1
Paraskevia cesatiana  (none) ?????????????????????????????0
Procopiania cretica  (none) ?????????????????????????????-
Rochelia cancellata  (none) ?????????????????????????????1
Rochelia persica  (none) ?????????????????????????????1
Thaumatocaryon dasyanthum  (none) ?????????????????????????????0
Thaumatocaryon tetraquetrum  (none) ?????????????????????????????0
Trigonotis guilielmii  (none) ?????????????????????????????1
Ulugbekia tschimganica  (none) ?????????????????????????????0
Pulmonaria angustifolia  (none) ?000100001???????????000000000
Mertensia longiflora  (none) ????000000010000000??000000000
Omphalodes lojkae  (none) ?001000000010000000??000000000
Oreocarya cana  (none) ???000301001000000010000100001
Dasynotus sp.  (none) ?010001010010000000??000100001
Cryptantha flava C389  (none) ??????3010010000000??000100001
Cryptantha paysonii  (none) ????003010010000000??000100001
Cryptantha confertiflora  (none) ??10003010010000000??000100001
Cryptantha fulvocanescens  (none) ???0003010010000000??000100001
Mertensia paniculata C405  (none) ?????????????????????000000000
Eritrichium caucasicum  (none) ??100000000110000????????????1
Eritrichium nanum  (none) ?011000?0001000000???000000001
Cryptantha fendleri  (none) ??????????????????????????????
Plagiobothrys myosotoides  (none) ??????????????????????????????
Greeneocharis circumscissa  (none) ??????????????????????????????
Pectocarya anomala  (none) ??????????????????????????????
Pectocarya peninsularis  (none) ??????????????????????????????
Plagiobothrys kingii  (none) ??????????????????????????????
Amsinckia spectabilis  (none) ??????????????????????????????
Pectocarya penicillata ITS  (none) ??????????????????????????????
Antiphytum hintoniorum  (none) ??????????????????????????????
Cynoglossopsis sp.  (none) ??????????????????????????????
Echiochilon longiflorum  (none) ??????????????????????????????
Macrotomia densiflora  (none) ??????????????????????????????
Onosma visianii  (none) ??????????????????????????????
Solenanthus apenninus  (none) ??????????????????????????????
Solenanthus circinatus  (none) ??????????????????????????????
Solenanthus stamineus  (none) ??????????????????????????????
Tysonia africana  (none) ??????????????????????????????
Trigonotis peduncularis  (none) ??????????????????????????????
Echium russicum Pontechium maculatum  (none) ?010000001000000000??030000000

Columns

Column Character Description
1 matk gap 36
2 matk gap 159
3 matk gap 267
4 matk gap 504
5 matk gap 532
6 matk gap 556
7 matk gap 722
8 matk gap 874
9 matk gap 974
10 matk gap 1452
11 matk gap 1479
12 matk gap 1494
13 matk gap 1533
14 matk gap 1546
15 matk gap 1552
16 matk gap 1585
17 matk gap 1654
18 matk gap 1700
19 matk gap 1730
20 matk gap 1759
22 ndhf gap 3475
23 ndhf gap 3501
24 ndhf gap 3542
25 ndhf gap 3561
26 ndhf gap 3608
27 ndhf gap 3622
28 ndhf gap 3765
29 ndhf gap 3943
30 trnlf gap 4555
31 trnlf gap 4643
32 trnlf gap 4676
33 trnlf gap 4701
34 trnlf gap 4716
35 trnlf gap 4757
36 trnlf gap 4786
37 trnlf gap 4895
38 trnlf gap 4909
39 trnlf gap 4922
40 trnlf gap 4943
41 trnlf gap 5110
42 trnlf gap 5136
43 trnlf gap 5232
44 trnlf gap 5300
45 trnlf gap 5330
46 trnlf gap 5347
47 trnlf gap 5380
48 trnlf gap 5423
49 trnlf gap 5460
50 trnlf gap 5495
51 trnlf gap 5584
52 trnlf gap 5613
53 trnlf gap 5650
54 trnlf gap 5696
56 Corolla Shape
57 Corolla Symmetry
58 Nutlet Surface Morphology
59 Nutlet Attachment
60 Herkogamy
61 Corolla Color
62 Stigma Position
63 Faucal Appendages
64 Glands
65 Androecial Apical Projection
66 Bracts Subtending Flowers
67 Pollen Shape
68 Pollen Pore Number
69 Heterocolpate Pollen
70 Pollen Pore Position
71 Napthoquinones
72 Abaxial Trichomes on Corolla
73 Adaxial Trichomes on Corolla
74 Leaf Venation
75 Leaf Position
76 Anther Insertion
77 Stigma Insertion
78 Corolla Lobes
79 Chromosome Number
80 Vestured Pits
81 Cordate Leaves
82 Fruit Type
83 Conical Stigma