#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 18, 2024; 9:02 GMT

TreeBASE (cc) 1994-2008

Study reference:
Cenci A., Guignon V., Roux N., & Rouard M. 2013. Genomic analysis of NAC transcription
factors in banana (Musa acuminata) and definition of NAC orthologous groups
for monocots and dicots. Plant Molecular Biology, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S14688]

BEGIN TAXA;
        TITLE  Untitled_Taxa_Block;
        DIMENSIONS NTAX=16;
        TAXLABELS
            Arabidopsis_thaliana_ANAC074_At4g28530_1
            Musa_acuminata_GSMUA_Achr11T00880_001
            Musa_acuminata_GSMUA_Achr11T22760_001
            Musa_acuminata_GSMUA_Achr1T10860_001
            Musa_acuminata_GSMUA_Achr1T20530_001
            Musa_acuminata_GSMUA_Achr5T18670_001
            Musa_acuminata_GSMUA_Achr6T36550_001
            Musa_acuminata_GSMUA_Achr8T18980_001
            Musa_acuminata_GSMUA_AchrUn_randomT02760_001
            Musa_acuminata_GSMUA_AchrUn_randomT17260_001
            Oryza_sativa_Os02g41450_1
            Oryza_sativa_Os02g56600_1
            Oryza_sativa_Os03g01870_1
            Oryza_sativa_Os04g43560_1
            Oryza_sativa_Os10g33760_1
            Vitis_vinifera_VvNAC56_GSVIVT01028354001
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M18562]

	TITLE MSA_OG1a;
	LINK TAXA = Untitled_Taxa_Block;
	DIMENSIONS NCHAR=171;
	FORMAT DATATYPE=Protein SYMBOLS= "A C D E F G H I K L M N P Q R S T V W Y" MISSING=? GAP= -;

MATRIX
[                                                        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170 ]
[                                                         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         . ]
Arabidopsis_thaliana_ANAC074_At4g28530_1         KDIGSKLPPGFRFHPSDEELVCHYLCNKITDLVEIDLHICEPWELPDVAKLNAKEWYFFSFRDRKYATGYRTNRATVSGYWKATGKDRTVPRTRQVGMRKTLVFYRNRAPNGIKTTWIMHEFRLECPNIPPKEDWVLCRVFNKGRDSSPPESLLNLSSLDMT------GLS
Musa_acuminata_GSMUA_Achr11T00880_001            RDIEFTLPPGFRFYPSDEELVCHYLYKKVATMVEVDLHTREPWELPDVAKLGADEWYFFSFRDRKYATGSRTNRATRSGYWKATGKDRTVPSTHAVGMRKTLVFYGGRAPNGIKSGWIMHEFRMENPHSPPKEDWVLCRVFKKSKGSSSPSSNPFMAMLQCNGEIGLMELG
Musa_acuminata_GSMUA_Achr11T22760_001            RDIESTLPPGFRFYPSDEELVCHYLYQKVGTMVEVDLHTCEPWELPDVAKLSANEWYFFSFRDRKYATGSRTNRATKSGYWKATGKDRTIPRTQAVGMRKTLVFYRGRAPNGVKSGWVMHEFRLETPHSPSK-DWVLCRVFHKRKGSSS-SPNPFLALLQCNDEFGLSELG
Musa_acuminata_GSMUA_Achr1T10860_001             RDIESTLPPGFRFHPSDQELVCHYLRKKVDTMVEVDLHTREPWELPEVAKLSANEWYFFSFRDRKYTTGSRTNRATKSGYWKATGKDRTVPTTHAVGMRKTLVFYRGRAPNGIKTEWVMHEFRLESPCTPPKEDWVLCRVFHKKKESSHPSLDTLLAAYHYNDDYGVVETG
Musa_acuminata_GSMUA_Achr1T20530_001             RDIQATLPPGFRFCPSDEELVCYYLYKKVGTLVEVDLHTREPWELPEVAKLSTNEWYFFSFRDRKYATGLRMNRATKSGYWKATGKDRTVPTTLAVGMRKTLVFYSGRAPNGVKSNWVMHEFRLEAPYSPPKEDWVLCRVFQKNKGSSPPDDL---AAPRGNDDCELLDMS
Musa_acuminata_GSMUA_Achr5T18670_001             REIESTLPPGFRFYPSDEELVCHYLYKKVGTMVEVDLHTSEPWELPDVAKLSANEWYFFSFRDRKYATGSRTNRATKSGYWKATGKDRIIPRTHAVGMRKTLVFYGGRAPNGAKTGWVMHEFRLETPHSPPREDWVLCRVFHKRKGSSSPSSDPFLALLQRNDELGLLDLG
Musa_acuminata_GSMUA_Achr6T36550_001             RDIESTLPPGFRFCPSDEELVCYYLFKKVGTMVEVDLHTREPWELPEVAKLSRDEWYFFSFRDRKYATGLRMNRATRSGYWKATGKDRSVPTTRTMGMRKTLVFYSGRAPNGVKSDWVMHEFRLEAPHTPPKEDWVLCRVFRKKKKSSPPGSNTVLAVLRGSDDYELLDMS
Musa_acuminata_GSMUA_Achr8T18980_001             RDIESTLPPGFRFFPSDEELVCHYLHKKVGTMVEVDLHTREPWELPDVAKLTANEWYFFSFRDRKYATGSRANRATRSGYWKATGKDRTIPTTHAVGMRKTLVFYRGRAPSGAKTDWVMHEFRLETPHSPPKEDWVLCRVFHKKKGSSSPSSDPFLALMQGSDELGPLDLG
Musa_acuminata_GSMUA_AchrUn_randomT02760_001     RDIESTLPPGFRFYPSDEELVCHYLQKKVGTMVEVDLHTREPWELPEVAKLSANEWYFFSFRDRKYATGSRTNRATKSGYWKATGKDRTVPATRAVGMRKTLVFYSGRAPNGMKTNWVMHEFRLESPHTPPKEDWVLCRVFNKKKGSSPPSSNTFLAALRYNGDYGVLDMG
Musa_acuminata_GSMUA_AchrUn_randomT17260_001     RDIESTLPPGFRFYPSDEELVCHYLYKKVGTMVEVDLHTREPWELPDAAKLSANEWYFFSFRDRKYASGSRANRATKSGYWKATGKDRTIPTTHTVGMRKTLVFYQGRAPNGAKTGWVMHEFRLETPHSPPK-DWVLCRVFHKRKGSASSSLNPFLALLQCNDELGLLDLG
Oryza_sativa_Os02g41450_1                        REIESTLPPGFRFFPSDEELVCHYLHKKVSTLVEVDLHAREPWELPEVAKLTASEWYFFSFRDRKYATGSRTNRATKTGYWKATGKDREVSSSRAVGMRKTLVFYQGRAPNGVKTGWVMHEFRLDSPHSQPREDWVLCRVFQKRKGAASPDSAAGFPHYQYGDEYGYLDLG
Oryza_sativa_Os02g56600_1                        RDIELTLPPGFRFYPSDEELVCHYLHNKVGTMVEVDLHTHEPWELPDVAKLSTNEWYFFSFRDRKYATGLRTNRATKSGYWKATGKDRVIPKLHAVGMRKTLVFYRGRAPNGVKTNWVMHEFRMENPHTPPKEDWVLCRVFYKKKASSHD------ALYSS-EQCGLMELG
Oryza_sativa_Os03g01870_1                        RAIESRLPPGFRFHPSDEELVGYYLRNKQSMLVEVDLHACEPWDLPEVAKVGSDEWYFFSWRERKYATGWRRNRASKQGYWKATGKDKPIPT---AGARKTLVFYSGRAPNGRKTAWVMHEFRLLHHHHHPNDDWVLCRVFRKGNNTSSP------------DEQHLLDLS
Oryza_sativa_Os04g43560_1                        REIESTLPPGFRFYPSDEELVCHYLYKKVGTLVEVDLHAREPWELPDVAKLTASEWYFFSFRDRKYATGSRTNRATKTGYWKATGKDREVPATRAVGMRKTLVFYQGRAPNGVKSGWVMHEFRLDSPHSPPKEDWVLCRVFQKSKGAASPSSHQLLAMLQCNDEYGFYDTG
Oryza_sativa_Os10g33760_1                        REMESTLPPGFRFCPSDEELICFYLRNKVGTLVDVDLHAREPWELPEVAKLTAEEWYFFSFRDRKYATGSRTNRATKTGYWKATGKDRIVGTTRAVGMRKTLVFYLGRAPNGQKTTWVMHEFRLETPNSQPKEDWVLCRVFDKKKPGSSPSSSALLTMLQYSNDATALGMG
Vitis_vinifera_VvNAC56_GSVIVT01028354001         RDIGATLPPGFRFYPSDEELVCHYLYKKIGTLVEIDLHICEPWQLPDVAKLNSTEWYFFSFRDRKYATGYRTNRATTSGYWKATGKDRPVPTTHEVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKTKSSSPPDQTTLLAVLNPNDEYGLWDMS
;
END;