#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 23, 2024; 10:57 GMT

TreeBASE (cc) 1994-2008

Study reference:
Cenci A., Guignon V., Roux N., & Rouard M. 2013. Genomic analysis of NAC transcription
factors in banana (Musa acuminata) and definition of NAC orthologous groups
for monocots and dicots. Plant Molecular Biology, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S14688]

BEGIN TAXA;
        TITLE  Untitled_Taxa_Block;
        DIMENSIONS NTAX=7;
        TAXLABELS
            Arabidopsis_thaliana_ANAC033_At1g79580_1
            Musa_acuminata_GSMUA_Achr10T14400_001
            Musa_acuminata_GSMUA_Achr10T21750_001
            Musa_acuminata_GSMUA_Achr2T20020_001
            Oryza_sativa_Os02g15340_1
            Oryza_sativa_Os06g33940_1
            Vitis_vinifera_VvNAC68_GSVIVT01036682001
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M18566]

	TITLE MSA_OG2e;
	LINK TAXA = Untitled_Taxa_Block;
	DIMENSIONS NCHAR=266;
	FORMAT DATATYPE=Protein SYMBOLS= "A C D E F G H I K L M N P Q R S T V W Y" MISSING=? GAP= -;

MATRIX
[                                                    10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260      ]
[                                                     .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .      ]
Arabidopsis_thaliana_ANAC033_At1g79580_1     AGGGQLSVPPGFRFHPTEEELLYYYLKKKVSYEPIDLDVIREVDLNKLEPWELKEKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKSIHLNSSKKIGLRKTLVFYTGRAPHGQKTEWIMHEYRLDDSENEIQEDGWVVCRVFKKKNHFRG--QEQDDSNSPLISMHLPQLFSPDVSP-INTTDIESQNLLRLTS------NNNYGDWSFLDKLLTTQQQQVQNHQAKCFGDLSNNDQRFPFYLGNDANLLKFP
Musa_acuminata_GSMUA_Achr10T14400_001        PSNGQLSVPPGFRFHPTDEELLYYYLRKKVAYEAIDLDIIRDVDVNKLEPWDLKEKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKTIHLSNSKRIGMRKTLVFYTGRAPHGQKTEWIMHEYRLDDESSDIQEDGWVVCRVFKKKNHQSGAILEEDDQKMPCDSFHLPQLLSSEVPPPINSLDLESQNLMKLTSSGGGILQERFGDWSILDKLLASHKNLDQLFHSKCNPPSQLMDRRNPLFLGSEADLLRFS
Musa_acuminata_GSMUA_Achr10T21750_001        TSNRQLMVPPGFRFHPTDEELLYYYLRKKLAYEAIDLDIIGDVDLNKLEPWDLKDKCRIESGPQNEWYFFCRKDKKYPTGTRTNRATAAGFWKATGRDKAIHLGNSKRIGMRKTLVFYTGRAPHGRKTDWIMHEYRLDRETSEVQEDAWVVCKVFQKKSHPTHTVVEEDERKQPSDSMHLPQLLSSEVPPS-----------MRSTLGGCVTLQERLWDWSILDKLLASHQNLDQILQSKSNPPTQF-------------------
Musa_acuminata_GSMUA_Achr2T20020_001         PSNGQLSIPPGFRFHPTDEELLYYYLRKKVAYEAIDLDVIRDVDINKLEPWDLKEKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIHLSSSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLEDRNPDIQEDGWVVCRVFKKKNYQRGAVMEEDDQKQPYDSMHLPQLLSSEVPPSINSLDLESQNLMKLTTGGGALLQDRFGDWSILDKLLASHQDLDQLFQSKCNPPSQLLDHRNPFYLGCEADLLKFS
Oryza_sativa_Os02g15340_1                    PNGAPLAVPPGFRFHPTDEELLYYYLRKKVAYEAIDLDVIREIDLNKLEPWDLKDRCRIGTGAQEEWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKAIFLGSGTRIGLRKTLVFYTGRAPHGKKTDWIMHEYRLDDDNVDVPEEGWVVCRVFKKKSHQRGAAADEDDQKHGFVSMHLPQLASADVAFSMNPLDAASQNMMTMKMGGEMLLGGRFADWSILDKLLASHQNLDQLFHGKVAGAHQQQQQRLPFYLGLEADLLKFS
Oryza_sativa_Os06g33940_1                    PSGGALSVPPGFRFHPTDEELLYYYLRKKVAYEAIDLDVIREIDLNKLEPWDLKDRCRIGTGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACRIGMRKTLVFYVGRAPHGKKTDWIMHEYRLDQDNVDVQEDGWVVCRVFMKKSYQRGAAVDDDHLMQYDDSMQLPQLMSADVPPALSSLDVEPQNLMKLTSGGATGLDHRFTDWSILDKLLASHQNLDQLFQGRVIAGASSPAQRLPLYLGCEADLLRFS
Vitis_vinifera_VvNAC68_GSVIVT01036682001     PASGQLSVPPGFRFHPTDEELLHYYLRKKVSYEAIDLDVIREVDLNKLEPWDLKDKCRIGSGSQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAIHLSNSKRIGLRKTLVFYTGRAPHGQKTDWIMHEYRLDDDNADVQEDGWVVCRVFKKKNHNRG-AAQEEEPKQLYDSMHLPQLLSPEISPSLNTMDIESQNLLRLTSTGCGLIQERMGDWSFLDKLLASHQSLDQHSQTKCHPSSQVVDQKFPFYLGCETDILKFS
;
END;