#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 24, 2024; 3:00 GMT

TreeBASE (cc) 1994-2008

Study reference:
Cenci A., Guignon V., Roux N., & Rouard M. 2013. Genomic analysis of NAC transcription
factors in banana (Musa acuminata) and definition of NAC orthologous groups
for monocots and dicots. Plant Molecular Biology, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S14688]

BEGIN TAXA;
        TITLE  Untitled_Taxa_Block;
        DIMENSIONS NTAX=11;
        TAXLABELS
            Arabidopsis_thaliana_ANAC075_At4g29230_1
            Arabidopsis_thaliana_ANAC099_At5g56620_1
            Musa_acuminata_GSMUA_Achr10T27600_001
            Musa_acuminata_GSMUA_Achr2T16590_001
            Musa_acuminata_GSMUA_Achr4T30940_001
            Musa_acuminata_GSMUA_Achr6T05480_001
            Musa_acuminata_GSMUA_Achr7T09510_001
            Oryza_sativa_Os01g09550_1
            Oryza_sativa_Os05g10620_2
            Oryza_sativa_Os06g36480_1
            Vitis_vinifera_VvNAC19_GSVIVT01015274001
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M18590]

	TITLE MSA_OG7b;
	LINK TAXA = Untitled_Taxa_Block;
	DIMENSIONS NCHAR=671;
	FORMAT DATATYPE=Protein SYMBOLS= "A C D E F G H I K L M N P Q R S T V W Y" MISSING=? GAP= -;

MATRIX
[                                                    10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670 ]
[                                                     .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         . ]
Arabidopsis_thaliana_ANAC075_At4g29230_1     MNKSNPAGSVTGS-----DIIDAKIE--E-HQLCGSKK--CPSCGHKLE--GKPQDWVGLPAGVKFDPTDQELIEHLEAKVLAKD-----FKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRK-I---------------------------------QTECDNNLQGSSSS----GETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGTHEEEKEGELVVSKIFYQTQPRQC----NWSSSTSSLNAIGGGGGE-ASSGGGGGEYHMRRDSGTTSGGSCSSSREIINVNPPNRSDEIGG--VGGGVMAVAAAAAAVAA-GLPSYAMD--QLSFVPFMKSFDE-VARRETPQTGHATCEDVMAEQHRHRHQPS---SSTSHHMAHDHHHHHHQQQQQRHH-------AFNISQ-PTHPISTIISPSTSLHHASINILDDNPYHVHRILLPNENYQTQQQLRQEGEEEHNDGKMG-GR-SASGLEELIMGCTSSTTHHDVKDGSSSMGNQQ-EAEWLKYSTFWPAPDSSDNQDHH-G--------------------------------------------------------------------------------------------
Arabidopsis_thaliana_ANAC099_At5g56620_1     MKNS-------KC-----NLIDSKLE--EHHHLCGSKH--CPGCGRMIQAATKP-NWVGLPAGVKFDPTDQELIEHLEAKVKGKEENKKWSSSHPLIDEFIPTIDGEDGICYTHPQKLPGVTRDGLSKHFFHKPSRAYTTGTRKRRKII---------------------------------QTDHDSELTGS-------SETRWHKTGKTRPVMINGQQRGCKKILVLYTNFGKNRRPEKTNWVMHQYHLGINEEEREGELVVSKIFYQTQPRQCVSNTNW-SDHHG-----------------------SKDVIGIGVG-----------------DEISS--VAATLQSLGSGDV-----------VS--RVNMHPHTRSFDE--GTAEASKGRENQHVSGTCEEVHDGIITS---SMSSHHMIHD----HHNQHHQIGD-----RREFHMSS--SYPMTPTITS----QHESI-------FHVTSTM----PFQ----------------QLRGRS-SGSGLEDLIMGCTTATCT----EDEHSEANPQRNAEWLTFPQFW----------------------------------------------------------------------------------------------------------
Musa_acuminata_GSMUA_Achr10T27600_001        MNTS-PIGSVSSS-----SLIDAKLE--E-QRVGVSEQ--CPRCGHKLD--RKP-DWVGMPAGVKFDPTDQELIEHLEAKVKAQD-----LRSHPLIDEFIPTIEGEDGICYTHPEKLPGVRRDGLSKHFFHRPSKAYTTGTRKRRK-I---------------------------------QSECDLHR----------GETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKHRKPEKTNWVMHQYHLGEFEDEKEGELVVSKIFYQTQPRQC----NWSSDRSPAAAA-------AAAMEGMDQ---RRDGRS---GSSCSKAA-------SKRDEHSS--GGGGISGYSSMEM--HQ-HL-K--PD--NFSFAPFRESYSEVVAVGEEPKQR--------GEHAEHEHLVR----PPHRHVAQ--------QQQQMAP-----TAAFCVGR-PINPISTIMST--SLQQTSI-VLD-DPYQVSRMLLQADKFQQQQQEQPRLQQ-----KLD-HG-STSGLEELVMSCTSAGTK-----GEASKPHSQ-ETEW--HYTYW-SP---DNADHH-G--------------------------------------------------------------------------------------------
Musa_acuminata_GSMUA_Achr2T16590_001         MDLS----HISSS-----NLIDAKLE--E-HRMCGASQ--CPSCGHRLD--RKP-DWVGLPAGVKFDPTDQELIEHLEAKVEAAG-----LKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTKDGLSKHFFHRPSKAYTTGTRKRRK-I---------------------------------QTECDLQR----------GETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGELEEEKEGELVVSKIFYQTQPRQC----HW-SDKN--AAA-------AATVEGMDQ---RRDSGS---GSCSSKEVI------GQRDEISS---GPVISGYGGMEMRHHH-HL-K--PD--NFSFSPFRKSFEE-ASLGEAAAKR--------GEHE-------------HHQIIQE----QQQQQSHGDR-----SMALHITR-PTNLMSTFVSPP-PIQQTSI-VLD-DPYHVS--VLQADKYQQQQ------QQQ----KLD-HR-STSGLEELIMGCTSSGTK-----GEALIPQTQ-ETEW--QYSYW-SP---DNRDHH-G--------------------------------------------------------------------------------------------
Musa_acuminata_GSMUA_Achr4T30940_001         MNSS-SIGSVSSS-----SLIDAKLR--E-HPVCGSIR--CPSCGHKLD--RNL-GWVGLPAGVKFDPTDQELIEHLEAKVKEEG-----SRSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSKHFFHRPSKAYTTGTRKRRK-I---------------------------------QSESDLHR----------GETRWHKTGKTRPVMVNGTQMGCKKILVLYTNFGKHRKPVKTNWVMHQYHLGELEEEKDGELVVSKVFYQIQPRQ------W-SDKS------------AAAVEGMSQ---RRDS-----------EVL------SKRDEYS----------YSSMGM--HQ-HV-K--PD--NFIFAPFAEGFNE-VAVGEAS-----------DEHAEHERHVRLPPPPPYHRVARQ----QQQQQWRMAT----ATAAFHSRRPPMNPISKFVPT--PLQQTSI-VLE-DPYQVPRMLLQPDKF----------LQQ----KLDHHR-STSGLEELIMSCTSAGIK-----GETSTPISQ-ETAW--QYSYW-SP---ANPDHH-G--------------------------------------------------------------------------------------------
Musa_acuminata_GSMUA_Achr6T05480_001         MNTS-PKGSVSGS-----SLIDAKLE--E-HRVCGSKQ--CPGCGHKFD--QRP-DWVGLPAGVKFDPTDQELIEHLEAKVKEED-----LRSHPLIDEFIPTIDGEDGICYTHPERLPGVTRDGLSKHFFHRPSKAYTTGTRKRRK-I---------------------------------QSECDLQK----------GETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKHRKPEKTNWVMHQYHLGELEEEKEGELVVSKIFYQTQPRQC----NL-SERS--TAV-------AAAMEGIDQ---RRDSGS---GSCSSKEA--------------------GVSGYSGMEM--HQ-HM-K--PD--NFSFAPFRESFNE-VAMGEAPKAR--------DEHAEHERRAR----PPPHYLAQEKQQQQRRQQRQGAP-----ATAFHITR-PMNPISTVISAP-PLHHASV-VLG-DPFHVSRILFQADKSQQQQQQQAQRQQQ----KLE-GG-SASGLEELVLSCTSAGHR-----GETPIPHSQ-ETEW--QYSYW-SS---DNPDHH-G--------------------------------------------------------------------------------------------
Musa_acuminata_GSMUA_Achr7T09510_001         MNTS-P--KVSTS-----SLIDAKLV--Q-HRVSVSKQ--CPGCGHKLD--RKP-DWVGLPAGVKFDPTDQELVEHLEAKVKAED-----LTSHPLIDEFIPTIEGDDGICYTHPEKLPGVRRDGLSKHFFHRPSKAYTTGTRKRRK-I---------------------------------QSTCDLQR----------GETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKHRKPEKTNWVMHQYHLGESEEEKEGELVVSKIFFQTQPRQC----TW-SDKSSTTAA-------ATA-EGMDQ---IRDSGG---ASCSSDLV-------SKRDEHS----------YSSMEM--HQ-HLMK--PD--NFSFAPFRESFNE-VAVGEEPKAR--------DEHSEHEHLVG----SPHHQVAQE---HQHLQQLQVVP-----TAAFHITR-PMHPIPAIVSTH-PHRQTSM-VLE-DPYQVSRILLQSDKFQQLE-----LQQ-----KLD-HR-SASGLEELVMSCTSARTN------ETSIAHSQ-ETEW--HFPFW-QS---DNPNHHGG--------------------------------------------------------------------------------------------
Oryza_sativa_Os01g09550_1                    MNRG----HISSS-----ELIDAKLE--E-RRISTAKH--CPSCGNKLD--CKP-DWVGLPAGVKFDPTDQELIEHLEAKVREEG-----SRSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSKHFFHRPSKAYTTGTRKRRK-I---------------------------------QTECDVQK----------GETRWHKTGKTRPVMVSGRQKGCKKILVLYTNFGKHRKPEKTNWVMHQYHLGDLEEEKEGELVVCKIFYQTQPRQC----SWSSDRGGGAAATASAVTTAAVQQDQQR---RRDSGS---GSCSS----------TRDHEVSA--TSYSTAGYAVAAAVEMQ-HL-KHAAD--HFSFAPFRKSFEE-VGIS--------------GDQVHSNQLGR----SEQQHAGQE----QQPHRPLLATTTAVPATAFLISR-PTNPVSNIVPP--AMQHASV-VLDHDQFHVPAILLHHDKFQQ--------QQQ----KLD--R-RSAGLEELIMGCTSSSTK-----GEASIPHSQ-ETEW-PYQPYW-TP---DNQDHH-G--------------------------------------------------------------------------------------------
Oryza_sativa_Os05g10620_2                    MSSD----GASGS-------IGMKHDDGDHRPSTGASSRRCPSCGHDPD-CNKPFDMVGMPAGVRFDPTDQELIEHLEAKVKDGG-----STSHPLIDEFIHTIQGEDGICYTHPENLPGVTRDGLSKHFFHRSAKAYPTGTRKRRKVLA--------------------------------DQQPDDHPQASKGRNVAAAETRWHKTGKTREITVRGQPKGCKKILVLYTSFGKKRKAEKTSWVMHQYHLGELDDEKEGELILSKVFYQTQTR-------------------------------------------------------------------SAAAAEAPVSSGAAMEVQGQQQQVLKLQADDGHFSSAPTKKRLHQ----------------------------------DVVAQVKVDRGHHCMPAQRQV---------NFNL---KVTPVPTTSSFP---------VVVDKQLYSPVALFRSEHLH----------------------------------------------GRTSIHQPQ-KADW--PHQRWPP----DNQDQH-G--------------------------------------------------------------------------------------------
Oryza_sativa_Os06g36480_1                    MDGVVAEDQAGGSGSGHRRLIGSRIE--E-HRKYMSEESCCPRCGHKID--RKL-DWVGLPAGVKFDPTDQELIEHLEAKVRPGGE----AAAHPLIDEFIPTIEGEDGICYTHPEKLPGVSKDGLSRHFFHRPSKAYTTGTRKRRK-IQPPAAAASSGGGGGNASSSSSASAAAAVARHGHQQQQQQQR----------SETRWHKTGKTRAVVGGGRQRGCKKILVLYTNFGKHRKPEKTNWVMHQYHLGEAEEERDGELVVSKIFYQTQPRQC-------------AAADAAATASASAVD-------RRTTS-------------------LRDRAAAAAAAAAAAAPMASANVSVAAFHGGAAGID--EFSFAQFRSSFEE-AGMGASSSDHQSAMVDQRRRQQQHDD-------DEHDHRRGGGGHHYVGQQQSVAA-------TFHVVSSPADPIARLMSPP-PAHQGTVMLRQPEPPYI---------YHHQEDERPHQPR-----KFDGRSTSGSGLEEVIMGCTSRRSK----GGETSGGKD--GTEW-QYPSFWPS----DSQDHH-GDKDDIEAKQKGETEKEKGEEKQSFSRYTFAKKYSMNKETLKISSILHSGILSESKLPENFPVCVVEGEYDEHGNAWMNLILPFSDSSKLRLM
Vitis_vinifera_VvNAC19_GSVIVT01015274001     MNKT-HLGSISSS-----DLIDAKLE--E-HQMCGSKQ--CPGCGHKLE--TKP-DWLGLPAGVKFDPTDQELIEHLEAKVEAKD-----MKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRK-I---------------------------------QTECDLQG----------GETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQLEEEKEGELVVSKIFYQTQPRQC----NW-SDRS------------ATTGEGNSEPNSRRDSGS---GSCSSKEVI------PQRDELSGAGVGAAISSYSPLDI---Q-QL-K--SD--HFSFAPFRKSFDE-VGIGEASTAREAPASGTCEEHEIHDH--Q----RPHHVTHDPQPQPQHHHHHHHHPHHQLATAAFHITR-PSHSISAIISPP-PLHHTSI-ILDEDSYHVSRIMLQNENFQQHH-QQPQQQHH----KLG-GR-SASGLEELIMGCTSTDIK-----EESSITNPQ-EADWLKYSPFWPDP---DNPDHH-G--------------------------------------------------------------------------------------------
;
END;