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Matrix 23765 of Study 15907

About Citation title: "Mitogenomic data resolve basal relationships among passeriform and passeridan birds".
About Study name: "Mitogenomic data resolve basal relationships among passeriform and passeridan birds".
About This study is part of submission 15907 (Status: Published).

Matrices

Title: Aligned Passerine Mitogenomes (tRNA-Phe to tRNA-Thr)

Rows

Taxon Label Row Segments Characters 1?–30
Acanthisitta chloris AY325307  (none) ------------------------------
Acridotheres cristatellus NC 015613  (none) GTCCTTGTAGCTTACAC-AAAGCATGACAC
Acrocephalus scirpaceus NC 010227  (none) GTCTTTGTAGCTTATAA-AAAGCATAACAC
Agelaius phoeniceus JX516062  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Alauda arvensis NC 020425  (none) GTCCCTGTAGCTTATTC-AAAGCATGACGC
Amblyramphus holosericeus JX516063  (none) GTCCTTGTAGCTTATAA-AAAGCATGACAC
Magumma parva  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Himatione sanguinea  (none) GTTCTTGTAGCTTATAG-A{AG}AGCATGA
Leucosticte arctoa  (none) GTTCTTGTAGCTTATAG-AAAGCATGACAC
Leucosticte brandti  (none) GTTCTTGTAGCTTATAG-AAAGCATGACAC
Thraupis episcopus  (none) GTCTTTGTAGCTTATAA-AAAGCATGACAC
Bombycilla cedrorum  (none) GTCTCTGTAGCTTATAACAAAGCATGACAC
Campylorhynchus zonatus KF509924  (none) GTCCTCGTAGCTTACAAAAAAGCATGCCAC
Carduelis sinica NC 015196  (none) GTTCTTGTAGCTTATGA-AAAGCATGACAC
Carduelis spinus NC 015198  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Carpodacus cassinii  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Fringilla coelebs  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Chrysomus cyanopus JX516076  (none) GTCCTTGTAGCTTATAATAAAGCATGACAC
Chrysomus icterocephalus JX516060  (none) GTCCTTGTAGCTTATAACAAAGCATGACAC
Chrysomus ruficapillus JX516056  (none) GTCCTTGTAGCTTATAACAAAGCATGACAC
Chrysomus thilius JX516069  (none) GTCCTTGTAGCTTATAACAAAGCATGACAC
Chrysomus xanthophthalmus JX516059  (none) GTCCTTGTAGCTTATAATAAAGCATGACAC
Cnemotriccus fuscatus NC 007975  (none) GTCCCTGTAGCTTATAATAAAGCATAACAC
Loxia curvirostra  (none) GTTCTTGTAGCTTATAT-AAAGCATGACAC
Carpodacus erythrinus  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Corvus frugilegus NC 002069  (none) GTCCATGTAGCTTACAACAAAGCATGACAC
Curaeus curaeus JX516070  (none) GTCCTTGTAGCTTATAA-AAAGCATGACAC
Cyanopica cyanus NC 015824  (none) GTCCATGTAGCTTAAAGCAAAGCATGACAT
Cyanoptila cyanomelana NC 015232  (none) GTCCTCGTAGCTTACAACAAAGCATGGCAC
Dives dives JX516061  (none) GTCCTTGTAGCTTATAA-AAAGCATGACAC
Emberiza chrysophrys NC 015233  (none) GTCCCTGTAGCTTATAA-AAAGCATGACAC
Emberiza tristrami NC 015234  (none) GTCCCTGTAGCTTATAA-AAAGCATGACAC
Eopsaltria australis NC 019665  (none) GTCCTTGTAGCTTACAACAAAGCATGGCAC
Epthianura albifrons NC 019664  (none) GTCCTCATAGCTTAAACCAAAGCATGACAC
Euphagus cyanocephalus JX516072  (none) GTCCTTGTAGCTTATAA-AAAGCATGACAC
Pyrrhula pyrrhula  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Serinus serinus  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Coccothraustes vespertinus  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Ficedula zanthopygia NC 015802  (none) GTCCTCGTAGCTTACAA-AAAGCATGGCAC
Garrulax canorus NC 020429  (none) GTCCTTGTAGCTTATGC-AAAGCATGGCAC
Garrulus glandarius NC 015810  (none) GTCCATGTAGCTTACAACAAAGCATGACAC
Gnorimopsar chopi JX516055  (none) GTCCTTGTAGCTTATAACAAAGCATGACAC
Gracula religiosa NC 015898  (none) GTCCTTGTAGCTTACAA-AAAGCATGACAC
Chlorophanes spiza  (none) -TCCTTGTAGCTTATATAAAAGCATGACAC
Gymnomystax mexicanus JX516075  (none) GTCTTTGTAGCTTATAA-AAAGCATGACAC
Hemignathus virens  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Oreomystis mana  (none) GTTCTTGTAGCTTATAG-AAAGCATGACAC
Coccothraustes coccothraustes  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Carpodacus mexicanus  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Passer domesticus  (none) GTCCTTGTAGCTTAAAA-AAAGCATGACAC
Hyliota flavigaster  (none) GTCCTTGTAGCTTATAC-AAAGCATGACTC
Icterus mesomelas JX516068  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Vestiaria coccinea  (none) GTTCTTGTAGCTTATAG-AAAGCATGACAC
Loxops caeruleirostris  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Hemignathus stejnegeri  (none) GTTCTTGTAGCTTATAG-AAAGCATGACAC
Oreomystis bairdi  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Lampropsar tanagrinus JX516057  (none) GTCCTTGTAGCTTATAA-AAAGCATGACAC
Lanius tephronotus JX486029  (none) GTCCATGTAGCTTAAAT-AAAGCATGACAC
Leiothrix argentauris NC 015114  (none) GTTCCTGTAGCTTATAC-AAAGCATGGCAC
Leiothrix lutea NC 020427  (none) GTTCCTGTAGCTTATACCAAAGCATGGCAC
Carduelis psaltria  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Uragus sibiricus  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Luscinia calliope NC 015074  (none) GTCCCTGTAGCTTACAC-AAAGCATGGCAC
Macroagelaius imthurni JX516073  (none) GTCCTTGTAGCTTATAG-AAAGCATGACAC
Malurus melanocephalus  (none) GTTTTTGTAGCTTAAGGTAAAGCATGACAC
Hemignathus virens wilsoni  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Paroreomyza montana  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Pseudonestor xanthophrys  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Menura novaehollandiae NC 007883  (none) GTCCTTGTAGCTTAAAATAAAGCATAACCC
Molothrus aeneus JX516067  (none) GTCCTTGTAGCTTATAA-AAAGCATGACAC
Molothrus badius JX516074  (none) GTCCTTGTAGCTTATAACAAAGCATGACAC
Bucanetes mongolicus  (none) GTTCTTGTAGCTTATAG-AAAGCATGACAC
Nesopsar nigerrimus JX516054  (none) GTCCTTGTAGCTTATAA-AAAGCATGACAC
Cardinalis cardinalis  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Notiomystis cincta  (none) GTCCCTGTAGCTTATAATAAAGCATGACAC
Nucifraga columbiana KF509923  (none) GTCCATGTAGCTTACAATAAAGCATGACAC
Hemignathus flavus  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Oedistoma iliolophum  (none) GTCCCTGTAGCTTATAGCAAAGCATGACAC
Serinus canaria  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Oreopsar bolivianus JX516058  (none) GTCCTTGTAGCTTATAACAAAGCATGACAC
Carduelis sinica  (none) GTTCTTGTAGCTTATGA-AAAGCATGACAC
Oriolus chinensis NC 020424  (none) GTCCTTGTAGCTTAAAC-AAAGCATGACGC
Carpodacus roseus  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Petroica boodang NC 019666  (none) GTCCTTGTAGCTTATAACAAAGCATGACAC
Petroica goodenovii NC 019667  (none) GTCCTTGTAGCTTATAGCAAAGCATGACAC
Petroica phoenicea NC 019668  (none) GTCCTTGTAGCTTATAGCAAAGCATGACAC
Pica pica NC 015200  (none) GTCCATGTAGCTTACAACAAAGCATGACAC
Picathartes gymnocephalus  (none) GTCCTTGTAGCTTACAA-AAAGCATGACAC
Pinicola enucleator  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Carduelis pinus  (none) GTTCTTGTAGCTTATAG-AAAGCATGACAC
Lepidothrix coronata  (none) GTCCTTGTAGCTTACAATAAAGCATAACAC
Podoces hendersoni NC 014879  (none) GTCCATGTAGCTTACAACAAAGCATGACAC
Poecile atricapilla  (none) GTCCTCGTAGCTTACAACAAAGCATGACAC
Melamprosops phaeosoma  (none) GTTCTTGTAGCTTATAG-AAAGCATGACAC
Pseudoleistes guirahuro JX516071  (none) GTCCTTGTAGCTTATAACAAAGCATGACAC
Pseudoleistes virescens JX516066  (none) GTCCTTGTAGCTTATAACAAAGCATGACAC
Pseudopodoces humilis NC 014341  (none) GTCCCTGTAGCTTACAA-AAAGCATGGCAC
Pycnonotus sinensis NC 013838  (none) GTCCCTGTAGCTTATACAAAAGCATGACAC
Pycnonotus taivanus NC 013483  (none) GTCCCTGTAGCTTATACAAAAGCATGACAC
Agelaius phoeniceus  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Regulus calendula  (none) GTCTCTGTAGCTTAGAACAAAGCATGACAC
Scytalopus magellanicus  (none) GTCCCTGTAGCTTACAATAAAGCATGGCAC
Sitta carolinensis  (none) GTCCCTGTAGCTTAAAA-AAAGCATGACAC
Smithornis sharpei NC 000879  (none) GTCCCTGTAGCTTATAACAAAGCATGACAC
Sturnus cineraceus NC 015237  (none) GTCCTTGTAGCTTACAC-AAAGCATGACAC
Sturnus nigricollis NC 020423  (none) GTCCTTGTAGCTTACAC-AAAGCATGACAC
Sturnus sericeus NC 014455  (none) GTCCTTGTAGCTTACAC-AAAGCATGACAC
Sturnus tristis NC 015195  (none) GTCCTTGTAGCTTACAC-AAAGCATGACAC
Sylvia atricapilla NC 010228  (none) GTCTTTGTAGCTTGCAC-AAAGCATGGCAC
Sylvia crassirostris NC 010229  (none) GTCTTTGTAGCTTACAC-AAAGCATGGCAC
Tachycineta albilinea NC 020601  (none) GTCCCTGTAGCTTAAAC-AAAGCATGACAC
Tachycineta albiventer NC 020602  (none) GTCCCTGTAGCTTAAAC-AAAGCATGACAC
Tachycineta bicolor NC 020596  (none) GTCCCTGTAGCTTAAAC-AAAGCATGACAC
Tachycineta euchrysea NC 020598  (none) GTCCCTGTAGCTTAAAT-AAAGCATGACAC
Tachycineta leucorrhoa NC 020603  (none) GTCTCTGTAGCTTAAAC-AAAGCATGACAC
Tachycineta stolzmanni NC 020600  (none) GTCCCTGTAGCTTAAAC-AAAGCATGACAC
Taeniopygia guttata NC 007897  (none) GTCTTTGTAGCTTACAA-AAAGCATGACAC
Thamnophilus nigrocinereus  (none) GTTCTTGTAGCTTAAAA-AAAGCATAACAC
Tregellasia leucops  (none) GCCCTTGTAGCTTACAACAAAGCATGGCAC
Turdus migratorius  (none) GTCCTTGTAGCTTACAT-AAAGCATGACAC
Urocissa erythrorhyncha NC 020426  (none) GTCCATGTAGCTTACAACAAAGCATGACGC
Vidua chalybeata NC 000880  (none) GTCTTTGTAGCTTATAA-AAAGCATGACAC
Vireo olivaceus  (none) GTCCATGTAGCTTACAACAAAGCATGACAC
Serinus albogularis  (none) GTTCTTGTAGCTTATAA-AAAGCATGACAC
Xanthopsar flavus JX516065  (none) GTCCTTGTAGCTTATAACAAAGCATGACAC

Columns

None of the columns has a description.