#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 10, 2024; 15:57 GMT TreeBASE (cc) 1994-2008 Study reference: Ye W., Lee C., Scheffrahn R., Aleong J., Su N., Bennett G., & Scharf M. 2004. Phylogenetic relationships of nearctic Reticulitermes species (Isoptera: Rhinotermitidae) with particular reference to Reticulitermes arenincola Goellner. Molecular Phylogenetics and Evolution, 30(3): 815-822. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S1132] BEGIN TAXA; TITLE TaxonLabelSet11464; DIMENSIONS NTAX=31; TAXLABELS Coptotermes_formosanus Reticulitermes_arenincola_Sd Reticulitermes_flavipes Reticulitermes_flavipes_AF107479 Reticulitermes_flavipes_AF107480 Reticulitermes_flavipes_AF107481 Reticulitermes_flavipes_AF107482 Reticulitermes_flavipes_AF107484 Reticulitermes_flavipes_AF107489 Reticulitermes_flavipes_AF525321 Reticulitermes_flavipes_AF525322 Reticulitermes_flavipes_AF525323 Reticulitermes_flavipes_AF525324 Reticulitermes_flavipes_AF525325 Reticulitermes_flavipes_AF525326 Reticulitermes_flavipes_AY027477 Reticulitermes_flavipes_Sm Reticulitermes_flavipes_Wl Reticulitermes_hageni Reticulitermes_hesperus_AF525329 Reticulitermes_santonensis_AF262607 Reticulitermes_santonensis_AF291742 Reticulitermes_santonensis_AF291743 Reticulitermes_santonensis_AF525343 Reticulitermes_santonensis_AY027473 Reticulitermes_santonensis_AY027474 Reticulitermes_santonensis_AY027475 Reticulitermes_santonensis_AY027476 Reticulitermes_tibialis_Ag Reticulitermes_tibialis_Fs Reticulitermes_virginicus ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M2410] TITLE COII; LINK TAXA = TaxonLabelSet11464; DIMENSIONS NCHAR=684; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Coptotermes_formosanus ATGACAACATGATTAAACATAAGACTACAAGATGGAGCATCCCCCATTATAGAACAATTAGTCTTCTTCCACGACCATGTTCTAATAATTATACTAATAATCACCACAACCGTATCATACATAATGGTCACCTTAATCCGAAATAAACAAACCAGACGATTCATACTAGAAGGACAAATGATTGAAACCACATGAACCATTGCACCAGCAATCATCCTTGTGTTTATCGCCATACCATCACTACGACTCCTATACCTAATAGATGAAGTTCACAACCCAACACTAACACTAAAAGCAGTCGGACACCAATGATACTGAAGATATGAATATTCAGACTTTACAAAATTAGAATTCGACTCATACATAATCCCCCAAGAAGAACAACAAGAAAGAACATTCCGACTACTAGACACGGACAACCGAATCGTCCTACCAATCAATTCACCAATTCGACTAATCGTTACAGCAGCAGACGTCCTACACTCATGAACAATTCCAAGACTAGGGGTAAAAACAGACGCCACACCAGGACGACTAAATCAAACAAGATTCTCAATCAGTCGTCCTGGTATCCTATATGGACAATGCTCAGAGATTTGCGGAGCAAACCACAGATTCATACCCATCACAATTGAAAGAGTACCAGCAAAATACTTTATTAACTGAGTTTCAAAACTAAGAGAA Reticulitermes_arenincola_Sd ATGACAACATGATTAAACATAACACTACAAGACGGAGCATCTCCCATCATAGAACAATTAATCTTCTTCCACGATCATACATTAATAATCATATTAATAATCATCACAACCGTTATATACATAATAACCACCCTACTTTGAAATAAACACACCAGACGATTCATACTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATCATCCTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAGGCAGTAGGACATCAATGATACTGAAGATATGAATACTCAGACTTCACAAAATTAGAATTCGACTCTTACATAATCCCACAAGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTGGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGGGTGAAAACAGACGCCACACCAGGGCGACTAAATCAAGTAAGATTCTCAATCAATCACCCAGGTATCCTATACGGACAATGCTCAGAAATCTGCGGAGCTAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGTCTAAGAGAA Reticulitermes_flavipes ATGACAACATGATTAAACATAAGACTACAAGACGGAGCATCTCCCATCATAGAACAACTGATCTTCTTCCACGATCATACATTAATAATTATATTAATAATCATCACAACCGTTATATACATGATAACCACCCTACTTTGAAATAAACATACTAGACGATTCATACTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATTATCTTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAAGCAGTGGGACATCAATGATACTGAAGATATGAATATTCAGACTTCACAAAATTAGAATTCGACTCTTACATAATCCCACAAGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTAGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGGGTGAAAACAGACGCTACACCAGGACGACTAAATCAAGCAAGATTCTCAATCAATCACCCAGGTATCCTATACGGACAATGCTCAGAAATCTGCGGAGCTAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGTCTAAGAGAA Reticulitermes_flavipes_AF107479 ATGACAACATGATTAAACATAAGACTTCAAGACGGAGCATCTCCCATCATAGAACAACTGATCTTCTTCCACGATCATACATTAATAATTATATTAATAATCATCACAACCGTTATATACATAATAACCACCCTACTTTGAAATAAACACACTAGACGATTCATACTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATTATCCTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAAGCAGTGGGACATCAATGATACTGAAGATATGAATACTCAGACTTCACAAAATTAGAATTTGACTCTTACATAATCCCACAGGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTAGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGGGTGAAAACAGACGCCACACCAGGACGACTAAATCAAGCAAGATTCTCAATCAATCACCCAGGTATCCTATACGGACAATGCTCAGAAATCTGCGGAGCAAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAACTGAGTCTCAAGACTAAGAGAA Reticulitermes_flavipes_AF107480 ATGACAACATGATTAAACATAAGACTACAAGACGGAGCATCTCCCATCATAGAACAACTGATCTTCTTCCACGATCATACATTAATAATTATATTAATAATCATCACAACCGTTATATACATGATAACCACCCTACTTTGAAATAAACATACTAGACGATTCATACTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATTATCTTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAAGCAGTGGGACATCAATGATACTGAAGATATGAATATTCAGACTTCACAAAATTAGAATTCGACTCTTACATAATCCCACAAGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTAGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTGGGGGTGAAAACAGACGCTACACCAGGACGACTAAATCAAGCAAGATTCTCAATCAATCACCCAGGTATCCTATACGGACAATGCTCAGAAATCTGCGGAGCTAATCACAGATTTAGCCCTATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGCCTAAGAGAA Reticulitermes_flavipes_AF107481 ATGACAACATGATTAAACATAAGACTACAAGACGGAGCATCTCCCATCATAGAACAACTGATCTTCTTCCACGATCATACATTAATAATTATATTAATAATCATCACAACCGTTATATACATGATAACCACCCTACTTTGAAATAAACACACCAGACGATTCATACTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATTATCCTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAAGCAGTAGGACATCAATGATACTGAAGATTTGAATACTCAGACTTCACAAAATTAGAATTCGACTCTTACATAATCCCACAAGAGGAAAATCAAGCAAGAACCTTTCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTGGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGGGTGAAAACAGACGCCACACCAGGGCGACTAAATCAAGTAAGATTCTCAATCAATCACCCAGGTATCCTATACGGACAATGCTCAGAAATCTGCGGAGCTAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAACTGAGTCTCAAGCCTAAGAGAA Reticulitermes_flavipes_AF107482 ATGACGACATGATTAAACATAAGACTACAAGACGGAGCATCTCCCATCATAGAACAATTGATCTTCTTCCACGATCATACATTAATAATTATATTAATAATCATCACAACCGTTATATACATAATAACCACCCTACTTTGAAATAAACACACCAGACGATTCTTACTAGAAGGACAACTAATTGAAACCACATGAACAATTGCACCAGCAATTATCCTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAAGCAGTTGGGCATCAATGATACTGAAGATGTGAATACTCAGACTTCACAAAATTAGAATTCGACTCCTACATAATCCCACAGGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTGGTAGTGACAGCAGCAGACGTATTGCACTCTTGAACAATCCCAAGACTAGGGGTGAAAACAGACGCCACACCAGGGCGACTAAATCAAGTAAGATTCTCAATCAATCACCCAGGTATCCTATACGGACAATGCTCAGAAATCTGCGGAGCTAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAACTGAGTCTCAAGCCTAAGAGAA Reticulitermes_flavipes_AF107484 ATGACAACATGATTAAACATAACACTACAAGACGGAGCATCTCCCATCATAGAACAATTGATCTTCTTCCACGATCATACATTAATAATTATATTAATAATCATCACAACCGTTATATACATAATAACCACCCTACTTTGAAATAAACACACCAGACGATTCATACTAGAAGGACAACTAATTGAAACCACATGAACAATTGCACCAGCAATTATCCTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAGGCAGTAGGACATCAATGATACTGAAGATATGAATACTCCGACTTCACAAAATTAGAATTCGACTCCTACATAATCCCACAGGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTGGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGGGTGAAAACAGACGCCACACCAGGGCGACTAAATCAAGTAAGATTCTCAATCAATCACCCAGGTATCCTATACGGACAATGCTCAGAAATCTGCGGAGCTAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAACTGAGTCTCAAGCCTAAGAGAA Reticulitermes_flavipes_AF107489 ATGACAACATGATTAAACATAAGACTACAAGACGGAGCATCTCCCATCATAGAACAACTGATCTTCTTCCACGATCATACATTAATAATTATATTAATAATCATCACAACCGTTATATACATGATAACCACCCTACTTTGAAATAAACATACTAGACGATTCATACTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATTATCTTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATTCACAACCCAACAATAACCCTAAAAGCAGTGGGACATCAATGATACTGAAGATATGAATATTCAGACTTCACAAAATTAGAATTCGACTCTTACATAATCCCACAAGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTAGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGGGTGAAAACAGACGCTACACCAGGACGACTAAATCAAGCAAGATCCTCAATCAATCACCCAGGTATCCTATACGGACAATGCTCAGAAATCTGCGGAGCAAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGTCTAAGAGAA Reticulitermes_flavipes_AF525321 ATGACAACATGATTAAACATAACACTACAAGACGGAGCATCTCCCATCATAGAACAATTGATCTTCTTCCACGATCATACATTAATAATTATATTAATAATCATCACAACCGTTATATACATAATAACCACCCTGCTTTGAAATAAACACACCAGACGATTCATACTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATTATCCTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAGGCAGTAGGACATCAATGATACTGAAGATATGAATACTCAGACTTCACAAAATTAGAATTCGACTCTTACATAATCCCACAAGAGGAAAATCAAGCAAGAGCTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTGGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGGGTGAAAACAGACGCCACACCAGGGCGACTAAATCAAGTAAGATTCTCAATCAATCACCCAGGTATCCTATACGGACAATGCTCAGAAATCTGCGGAGCTAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGCCTAAGAGAA Reticulitermes_flavipes_AF525322 ATGACAACATGATTAAACATAACACTACAAGACGGAGCATCTCCCATCATAGAACATTTGATCTTCTTCCACGATCATACATTAATAATTATATTAATAATCATCACAACCGTTATATACATAATAACCACCCTACTTTGAAATAAACACACCAGACGATTCATACTAGAAGGACAACTAATTGAAACCACATGAACAATTGCACCAGCAATTATCCTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAGGCAGTAGGACATCAATGATACTGAAGATATGAATACTCAGACTTCACAAAATTAGAATTCGACTCTTACATAATCCCACAAGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTGGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGGGTGAAAACAGACGCCACACCAGGGCGACTAAATCAAGTAAGATTCTCAATCAATCACCCGGGTATTCTATACGGACAATGCTCAGAAATCTGCGGAGCTAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGCCTAAGAGAA Reticulitermes_flavipes_AF525323 ATGACAACATGATTAAACATAACACTACAAGACGGAGCATCTCCCATCATAGAACAATTGATCTTCTTCCACGATCATACATTAATAATTATATTAATAATCATCACAACCGTTATATACATAATAACCACCCTACTTTGAAATAAACACACCAGACGATTCATACTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATTATCCTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAGGCAGTAGGACATCAATGATACTGAAGATATGAATACTCAGACTTCACAAAATTAGAATTCGACTCTTATATAATCCCACAAGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTGGTAGTAACAGCAACAAACGTATTGCACTCATGAACAATCCCAAGACTAGGTGTGAAAACAGACGCCACACCAGGACGACTAAATCAAGTAAGTTTCTCAATCAATCACCCGGGTATCCTATACGGACAGTGCTCAGAAATCTGCGGAGCTAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGCCTAAGAGAA Reticulitermes_flavipes_AF525324 ATGACAACATGATTAAACATAACACTATTTGACGGAGCATCTCCCATCATAGAACAATTGATCTTCTTCCACGATCATACATTAATAATTATATTAATAATCATCACAACCGTTATATACATAATAACCACCCTACTTTGAAATAAACACACCAGACGATTCATACTAGAAGGACAACTAATTGAAACCACATGAACAATTGCACCAGCAATTATCCTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAGGCAGTAGGACATCAATGATACTGAAGATATGAATACTCAGACTTCACAAAATTAGAATTCGACTCTTATATAATCCCACAAGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGAATCGTACTACCCATAAATTCACCAATTCGACTGGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGTGTGAAAACAGACGCCACACCAGGACGACTAAATCAAGTAAGATTCTCAATCAATCACCCGGGTATCCTATACGGACAGTGCTCAGAAATCTGCGGAGCTAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAACTGAGTCTCAAGCCTAAGAGAA Reticulitermes_flavipes_AF525325 ATGACAACATGATTAAACATAACACTACAAGACGGAGCATCTCCCATCATAGAACAATTGATCTTCTTCCACGATCATACATTAATAATTATATTAATAATCATCACAACCGTTATATACATAATAACCACCCTACTTTGAAATAAACACACCAGACGATTCATACTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATTATCCTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAGGGAGTAGGACATCAATGATACTGAAGATATGAAGGCTCAGACTTCACAAAATTAGAATTCGCCTCTTATATAATCCCACAAGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGGATTGTACTACCCATAAATTCACCAATCCGACTGGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGTGTGAAAACAGACGCCACACCAGGGCGACTAAATCAAGTAAGATTCTCAATCAATCACCCGGGTATCCTATACGAACAGTGCTCAGAAATCTGCGGAGCTAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAACTGAGTCTCAAGCCTAAGAGAA Reticulitermes_flavipes_AF525326 ATGACAACATGATTAAACATAACACTACAAGACGGAGCATCTCCCATCATAGAACAATTAATCTTCTTCCACGATCATACATTAATAATTATATTAATAATCATCACAACCGTTATATACATAATAACCACCCTACTTTGAAATAAACACACCAGACGATTCATACTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATTATCCTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAGGCAGTAGGACATCAATGATACTGAAGATATGAATACTCAGACTTCACAAAATTAGAATTCGACTCTTATATAATCCCACAAGAGGAAAATCAAGAAAGAACTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATTCGACTGGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGTGTGAAAACAGACGCCACACCAGGACGACTAAATCAAGTAAGATTCTCAATCAATCACCCGGGTATCCTATACGGACAGTGCTCAGAAATCTGCGGAGCTAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGCCTAAGAGAA Reticulitermes_flavipes_AY027477 ATGACAACATGATTAAACATAAGACTACAAGACGGAGCATCTCCCATCATAGAACAACTGATCTTCTTCCACGATCATACATTAATAATTATATTAATAATCATCACAACCGTTATATACATGATAACCACCCTACTTTGAAATAAACATACTAGACGATTCATACTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATTATCTTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATTCACAACCCAACAATAACCCTAAAAGCAGTGGGACATCAATGATACTGAAGATATGAATATTCAGACTTCACAAAATTAGAATTCGACTCTTACATAATCCCACAAGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTAGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGGGTGAAAACAGACGCTACACCAGGACGACTAAATCAAGCAAGATCCTCAATCAATCACCCAGGTATCCTATACGGACAATGCTCAGAAATCTGCGGAGCAAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGTCTAAGAGAA Reticulitermes_flavipes_Sm ATGACAACATGATTAAACATAACACTACAAGACGGAGCATCTCCCATCATAGAACAATTGATCTTCTTCCACGATCATACATTAATAATTATATTAATAATCATCACAACCGTTATATACATAATAACCACCCTACTTTGAAATAAACACACCAGACGATTCATACTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATTATCCTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAGGCAGTAGGACATCAATGATACTGAAGATATGAATACTCAGACTTCACAAAATTAGAATTCGACTCTTATATAATCCCACAAGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTGGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGTGTGAAAACAGACGCCACACCAGGACGACTAAATCAAGTAAGATTCTCAATCAATCACCCGGGTATCCTATCCGGACAGTGCTCAGAAATCTGCGGAGCTAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGTCTAAGAGAA Reticulitermes_flavipes_Wl ATGACAACATGATTAAACATAACACTACAAGACGGAGCATCTCCCATCATAGAACAATTAATCTTCTTCCACGATCATACATTAATAATCATATTAATAATCATCACAACCGTTATATACATAATAACCACCCTACTTTGAAATAAACACACCAGACGATTCATACTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATCATCCTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAGGCAGTAGGACATCAATGATACTGAAGATATGAATACTCAGACTTCACAAAATTAGAATTCGACTCTTACATAATCCCACAAGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTGGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGGGTGAAAACAGACGCCACACCAGGGCGACTAAATCAAGTAAGATTCTCAATCAATCACCCAGGTATCCTATACGGACAATGCTCAGAAATCTGCGGAGCTAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGTCTAAGAGAA Reticulitermes_hageni ATGACAACATGATTAAACATAAGACTACAAGACGGAGCATCTCCCATCATAGAACAACTGATCTTCTTCCATGACCATACATTAATAATCATATTAATAATCATCACAACCGTAATGTACATAATAACTACCCTACTTTGGAATAAACACACTAGACGATTTATATTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATCATCCTAGTATTCATTGCAATACCATCCTTACGACTCCTATACCTAATAGACGAAATCCACAACCCGACAATAACTCTAAAAGCAGTAGGACACCAATGGTACTGGAGATATGAATACTCAGACTTCACAAAATTAGAATTTGACTCTTACATAATTCCACAGGAGGAAAATCAAACAAGAACCTTCCGACTACTAGACACAGACAACCGAATCGTACTACCCATAAACTCACCAATCCGACTAGTAGTAACAGCAGCAGACGTATTACACTCATGAACAATTCCAAGACTAGGGGTGAAAACAGACGCCACACCGGGACGGCTAAATCAATCAAGATTCTCAATCAATCACCCAGGTATCCTATATGGACAATGCTCAGAAATCTGTGGAGCAAATCATAGATTTATGCCTATCACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGCCTAAGAGAA Reticulitermes_hesperus_AF525329 ATGACAACATGATTAAACATAAGACTACAAGACGGAGCATCCCCCATCATAGAACAACTGATCTTCTTCCATGATCACACATTAATAATTATATTAATGATCATTACAACCGTAATGTACATAATAACCACCCTACTTTGAAATAAACACACCAGACGATTTATATTAGAAGGTCAACTAATTGAGACTACATGAACAATTGCTCCGGCAATCATCCTAGTATTCATTGCAATACCATCCCTACGACTTCTATATTTAATAGATGAAATCCACAACCCAACAATAACCCTAAAAGCAGTAGGACACCAATGATACTGAAGATATGAATATTCAGACTTCACAAAACTAGAATTCGACTCTTACATAATTCCACAGGAAGAAAACCAACCAAGAACTTTCCGACTATTAGACACAGACAACCGAATTGTACTACCCATAAACTCACCAATCCGACTAGTAGTAACAGCAGCAGACGTACTACACTCATGAACAATCCCAAGACTGGGAGTGAAAACAGACGCCACTCCAGGACGATTAAATCAAACAAGATTTTCAATCAATCACCCCGGTATCCTATACGGACAATGCTCAGAAATCTGTGGAGCAAATCACAGATTTAT?CCCATCACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGTCTAAGAGAA Reticulitermes_santonensis_AF262607 ATGACAACATGATTAAACATAACACTACAAGACGGAGCATCTCCCATCATAGAACAATTGATCTTCTTCCACGATCATACATTAATAATTATATTAATAATCATCACAACCGTTATATACATAATAACCACCTTACTTTGAAATAAACACACCAGACGATTCATACTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATTATCCTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAGGCAGTAGGACATCAATGATACTGAAGATATGAATACTCAGACTTCACAAAATTAGAATTCGACTCTTATATAATCCCACAAGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTGGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGTGTGAAAACAGACGCCACACCAGGACGACTAAATCAAGTAAGATTCTCAATCAATCACCCGGGTATCCTATACGGACAGTGCTCAGAAATCTGCGGAGCTAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGTCTAAGAGAA Reticulitermes_santonensis_AF291742 ATGACAACATGATTAAACATAACACTACAAGACGGAGCATCTCCCATCATAGAACAATTAATCTTCTTCCACGATCATACATTAATAATCATATTAATAATCATCACAACCGTTATATACATAATAACCACCCTACTTTGAAATAAACACACCAGACGATTCATACTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATCATCCTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAGGCAGTAGGACATCAATGATACTGAAGATATGAATACTCAGACTTCACAAAATTAGAATTCGACTCTTACATAATCCCACAAGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTGGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGGGTGAAAACAGACGCCACACCAGGGCGACTAAATCAAGTAAGATTCTCAATCAATCACCCAGGTATCCTATACGGACAATGCTCAGAAATCTGCGGAGCTAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGTCTAAGAGAA Reticulitermes_santonensis_AF291743 ATGACAACATGATTAAACATAACACTACAAGACGGAGCATCTCCCATCATAGAACAATTGATCTTCTTCCACGATCATACATTAATAATTATATTAATAATCATCACAACCGTTATATACATAATAACCACCCTACTTTGAAATAAACACACCAGACGATTCATACTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATTATCCTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAGGCAGTAGGACATCAATGATACTGAAGATATGAATACTCAGACTTCACAAAATTAGAATTCGACTCTTATATAATCCCACAAGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTGGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGTGTGAAAACAGACGCCACACCAGGACGACTAAATCAAGTAAGATTCTCAATCAATCACCCGGGTATCCTATACGGACAGTGCTCAGAAATCTGCGGAGCTAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTATCAAGTCTAAGAGAA Reticulitermes_santonensis_AF525343 ATGACAACATGATTAAACATAACACTACAAGACGGAGCATCTCCCATCATAGAACAATTGATCTTCTTCCACGATCATACATTAATAATTATATTAATAATCATCACAACCGTTATATACATAATAACCACCCTACTTTGAAATAAACACACCAGACGATTCATACTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATTATCCTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAGGCAGTAGGACATCAATGATACTGAAGATATGAATACTCAGACTTCACAAAATTAGAATTCGACTCTTATATAATCCCACAAGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTGGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGTGTGAAAACAGACGCCACACCAGGACGACTAAATCAAGTAAGATTCTCAATCAATACCCCGGGTATTCTATACGGACAGTGCTCAGAAATCTGCGGAGCTAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGTCTAAGAGAA Reticulitermes_santonensis_AY027473 ATGACAACATGATTAAACATAACACTACAAGACGGAGCATCTCCCATCATAGAACAATTGATCTTCTTCCACGATCATACATTAATAATTATATTAATAATCATCACAACCGTTATATACATAATAACCACCCTACTTTGAAATAAACACACCAGACGATTCATACTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATTATCCTAGCATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAGGCAGTAGGACATCAATGATACTGAAGATATGAATACTCAGACTTCACAAAATTAGAATTCGACTCTTATATAATCCCACAAGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTGGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGTGTGAAAACAGACGCCACACCAGGACGACTAAATCAAGTAAGATTCTCAATCAATCACCCGGGTATCCTATACGGACAGTGCTCAGAAATCTGCGGAGCTAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTATCAAGTCTAAGAGAA Reticulitermes_santonensis_AY027474 ATGACAACATGATTAAACATAACACTACAAGACGGAGCATCTCCCATCATAGAACAATTGATCTTCTTCCACGATCATACATTAATAATTATATTAATAATCATCACAACCGTTATATACATAATAACCACCCTACTTTGAAATAAACACACCAGACGATTCATACTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATTATCCTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAGGCAGTAGGACATCAATGATACTGAAGATATGAATACTCAGACTTCACAAAATTAGAATTCGACTCTTATATAATCCCACAAGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTGGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGTGTGAAAACAGACGCCACACCAGGACGACTAAATCAAGTAAGATTCTCAATCAATCACCCGGGTATCCTATACGGACAGTGCTCAGAAATCTGCGGAGCTAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTATCAAGTCTAAGAGAA Reticulitermes_santonensis_AY027475 ATGACAACATGATTAAACATAACACTACAAGACGGAGCATCTCCCATCATAGAACAATTGATCTTCTTCCACGATCATACATTAATAATTATATTAATAATCATCACAACCGTTATATACATAATAACCACCCTACTTTGAAATAAACACACCAGACGATTCATACTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATTATCCTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTAAAGGCAGTAGGACATCAATGATACTGAAGATATGAATACTCAGACTTCACAAAATTAGAATTCGACTCTTATATAATCCCACAAGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTGGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGTGTGAAAACAGACGCCACACCAGGACGACTAAATCAAGTAAGATTCTCAATCAATCACCCGGGTATCCTATACGGACAGTGCTCAGAAATCTGCGGAGCTAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTATCAAGTCTAAGAGAA Reticulitermes_santonensis_AY027476 ATGACAACATGATTAAACATAACACTACAAGACGGAGCATCTCCCATCATAGAACAATTGATCTTCTTCCACGATCATACATTAATAATTATATTAATAATCATCACAACCGTTATATACATAATAACCACCCTACTTTGAAATAAACACACCAGACGATTCATACTAGAAGGACAACTAATTGAAACTACATGAACAATTGCACCAGCAATTATCCTAGTATTCATTGCAATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACCCTGAAAGCAGTAGGACATCAATGATACTGAAGATATGAATACTCAGACTTCACAAAATTAGAATTCGACTCTTATATAATCCCACAAGAGGAAAATCAAGCAAGAACTTTCCGACTACTAGACACAGATAATCGAATTGTACTACCCATAAATTCACCAATCCGACTGGTAGTGACAGCAGCAGACGTATTGCACTCATGAACAATCCCAAGACTAGGTGTGAAAACAGACGCCACACCAGGACGACTAAATCAAGTAAGATTCTCAATCAATCACCCGGGTATCCTATACGGACAGTGCTCAGAAATCTGCGGAGCTAATCACAGATTTATGCCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTATCAAGTCTAAGAGAA Reticulitermes_tibialis_Ag ATGACAACATGATTAAACATAAGACTACAGGACGGAGCATCTCCCATCATAGAACAAATAATCTTCTTCCACGATCATACATTAATAATTATATTAATAATTATTACAACCGTAATGTACATAATAACCACGTTACTTTGAAATAAGCATACTAGACGATTCATATTAGAAGGACAACTAATTGAAACTACATGAACAATCGCGCCGGCAATCATCCTGGTATTCATTGCAATACCATCCTTACGACTCCTATATCTAATAGACGAAATTCATAACCCAGCAATAACCCTAAAAGCAGTAGGACATCAATGATACTGAAGATATGAATATTCAGACTTCACAAAACTAGAATTTGACTCTTACATAATCCCACAGGAAGAAAATCAAATAAGAACCTTCCGACTATTAGATACAGACAACCGAATTGTACTACCCATAAACTCACCAATTCGAATAGTAGTAACAGCAGCAGACGTGCTACACTCATGAACAATTCCAAGATTAGGCGTGAAAACGGACGCTACACCAGGACGATTAAATCAAACAAGATTCTCAATCAACCACCCCGGTGTTCTATACGGACAGTGCTCAGAAATCTGCGGGGCAAATCACAGATTTATACCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGCCTAAGAGAA Reticulitermes_tibialis_Fs ATGACAACATGATTAAACATAAGACTACAGGACGGAGCATCTCCCATCATAGAACAAATAATCTTCTTCCACGATCATACATTAATAATTATATTAATAATTATTACAACCGTAATGTACATAATAACCACGTTACTTTGAAATAAGCATACTAGACGATTCATATTAGAAGGACAACTAATTGAAACTACATGAACAATCGCGCCGGCAATCATCCTGGTATTCATTGCAATACCATCCTTACGACTCCTATATCTAATAGACGAAATTCATAACCCAGCAATAACCCTAAAAGCAGTAGGACATCAATGATACTGAAGATATGAATATTCAGACTTCACAAAACTAGAATTTGACTCTTACATAATCCCACAGGAAGAAAATCAAATAAGAACCTTCCGACTATTAGATACAGACAACCGAATTGTACTACCCATAAACTCACCAATTCGAATAGTAGTAACAGCAGCAGACGTGCTACACTCATGAACAATTCCAAGATTAGGCGTGAAAACGGACGCTACACCAGGACGATTAAATCAAACAAGATTCTCAATCAACCACCCCGGTGTTCTATACGGACAGTGCTCAGAAATCTGCGGGGCAAATCACAGATTTATACCCATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGCCTAAGAGAA Reticulitermes_virginicus ATGACAACATGATTAAACATAAGACTACAAGACGGAGCATCTCCCATCATAGAACAACTAATCTTCTTCCACGACCATACATTAATAATTATACTAATAATCATCACAACCGTAATGTACATAATAACCGCCCTACCTTGAAACAAACACACTAGACGATTTATATTAGAAGGACAACTAATCGAAACCACATGAACAATTGCACCAGCAATCATCCTAGTATTCATCGCGATACCATCCTTACGACTTCTATATCTAATAGACGAAATCCACAACCCAACAATAACTCTAAAAGCAGTAGGACACCAGTGATACTGAAGATATGAATATTCAGACTTCACAAAATTAGAATTTGACTCTTACATAATTCCACAAGAGGAAAATCAAGCAAGAACCTTCCGACTATTAGACACAGACAACCGAATTGTACTACCCATAAACTCACCAATCCGATTAGTAGTAACAGCAGCAGACGTACTACACTCATGAACAATTCCAAGACTAGGAGTGAAAACAGACGCCACACCAGGACGATTAAATCAAACAAGATTCTCAATCAATCACCCAGGTATCCTATACGGACAATGCTCAGAAATCTGTGGAGCAAATCATAGATTTATGCCTATTACAATCGAAAGAGTATCGGCAAATCACTTCATTAATTGAGTCTCAAGTCTAAGAGAA ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = COII) = N: 1-684; CODONPOSSET CodonPositions (CHARACTERS = COII) = N: 1-684; END;