#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on April 27, 2024; 19:56 GMT

TreeBASE (cc) 1994-2008

Study reference:
Meyer S., Carta L., & Rehner S. 2004. Morphological variability and molecular phylogeny
of the nematophagous fungus Monacrosporium drechsleri. Mycologia, null.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S1237]

BEGIN TAXA;
        TITLE  Bootstrap_consensus;
        DIMENSIONS NTAX=11;
        TAXLABELS
            Arthrobotrys_haptospora
            Dactylella_formosana
            Monacrosporium_drechsleri
            Monacrosporium_ellipsosporum_ATCC
            Monacrosporium_ellipsosporum_CBS
            Monacrosporium_leptosporum
            Monacrosporium_lysipagum
            Monacrosporium_mammillatum
            Monacrosporium_parvicolle
            Monacrosporium_phymatopagum
            Monacrosporium_tentaculatum
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M2562]

	TITLE ITS;
	LINK TAXA = Bootstrap_consensus;
	DIMENSIONS NCHAR=603;
	FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=. GAP= -;

MATRIX
[                                             10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600   ]
[                                              .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .   ]
Arthrobotrys_haptospora               GCGGAAGGATCATTACCAAAACAT-AGCTGTCTT------GGCCGCAAGGC----CCTGAC--GCTT-CAACCCTTTGTGAACCAAAAAAC-CTTTTCGCTTCGGTAGCAGC-CGGACCGGGTTTGGGGAGACCCGCCCGCCTGGCGTCAGCCTGCCGCTAGCACCAAACTTCA-AAACTTGCAGTCGA--A-CATTGTCTGATAACCAAAATTTTCGAATGAAAATCAAAACTTTCAACAACGGATCTCTTGGTTCCCGCATCGATGAAGAACGCAGCGAAACGCGATAGTTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCACTGGTATTCCATTGGGCATGTCTGTTTGAGCGTCATTACAACCCCTCGGTCACCACCGGTTTTGAGCCCGCGCGTCGCCTTACCGCGCCG-CGGGCTTTAAAGTTGTAAGCTCTGCTGGCTGCTCC-GCCCGACCAGAACA-TAGTAAAACACGA---CTGTTCAACGGGGAGGAGGA--CGCAGTTTTCCGGCCTGAACAAAACCAATTTT--TCTTAGGTTTGACCTCAGATCAGACAAGG-ATACCC-GCT
Dactylella_formosana                  GCGGAAGG-TCATTACCAAT-CAG--GCTGTCTA------GGCTGCGAAGC----CCTGAC--GCTTTCAACCCATTGTGAACCAAAAAA--CCTTTCGCTTCGGCAGCGGC-CCGGTTGGA---------AACA-CCCG---GGCGTCAGCCTGCCGCTAGCACAAACCCAAA-AAACTTGAAGAAAA--C-CTCTGTCTGATAACCAAA-TTTTCGAATGAAAATTAAAACTTTCAACAACGGATCTCTTGGTTCCCGCATCGATGAAGAACGCAGCGAAACGCGATAGTTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCATTGGTATTCCATTGGGCATGTCTGTTTGAGCGTCATTACAACCC-TCGGTACCAACCGGTTTTGAGCGAGCGCGGG---TCCTGACCCGGGCTGGCTTTAAAGTTGTAAGCTCTGCTGGCTGCTCA-GCCCAACCAGAACA-TAGTAAAACCTAC---TTGTTCAGCGGTCAGG-----TTGAAGCGGTACGGCCTGAACAAAACCTACCCAACTCTAAGGTTTGACCTCAGATCAGATAAGG-ATACCCCGCT
Monacrosporium_drechsleri             GCGGAAGGATCATTACCAAT-CAT---GTCTCCC------AGCCGAAAGGT----TGGTGCAGGCGCTTAACCCTCTGTGAACCAAAAAA--CCTTTCGCTTCGGCAGCAGC-TCGGTTGGC---------AACAGCCTCT---GCGTCAGCCTGCCGGTAGCACCAATCATCA-AAACTTGCAGTTAATAA-CATTGTCTGATTACCAAA-TTTTCGAATGAAAATCAAAACTTTCAACAACGGATCTCTTGGTTCCCGCATCGATGAAGAACGCAGCGAAACGCGATAGTTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCATTGGTATTCCATTGGGCATGTCTGTTTGAGCGTCATTACAACCC-TCGGTCACCACCGGTTTTGAGCAAGCGAGGT---CTCCGGACCCGGCTGGCTTTAAAGTTGTAAGCTCTGCTGGCTG-CCAGGCCCAACCAGAACA-TAGTAAAA-TCATG--CTTGTTCACGGTTCGCGG---TCGAAGCGGTACGGCCTGAACAATACCTACCAC-CTCTCAGGTTTGACCTCAGATCAGACAAGG-ATACCCGCTG
Monacrosporium_ellipsosporum_ATCC     GCGGAAGGATCATTACCAAT-CAT---GTCTCCC------AGCCGAAAGGT----TGGTGCAGGCGCTTAACCCTCTGTGAACCAAAAAA--CCTTTCGCTTCGGCAGCAGC-TCGGTTGGC---------AACAGCCTCT---GCGTCAGCCTGCCGGTAGCACCAATCATCA-AAACTTGCAGTTAATAA-CATTGTCTGATTACCAAA-TTTTCGAATGAAAATCAAAACTTTCAACAACGGATCTCTTGGTTCCCGCATCGATGAAGAACGCAGCGAAACGCGATAGTTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCATTGGTATTCCATTGGGCATGTCTGTTTGAGCGTCATTACAACCC-TCGGTCACCACCGGTTTTGAGCAAGCGAGGT---CTCCGGACCCGGCTGGCTTTAAAGTTGTAAGCTCTGCTGGCTG-CCAGGCCCAACCAGAACA-TAGTAAAA-TCATG--CTTGTTCACGGTTCGCGG---TCGAAGCGGTACGGCCTGAACAATACCTACCAC-CTCTCAGGTTTGGTACCTCCCAGGCCGATT-GTGCTATTCT
Monacrosporium_ellipsosporum_CBS      GCGGAAGGATCATTACCAAAACTT-AGCTGTCT-------GGCCGCAAGGC----TCTGAC--GCTT-CAACCCTTTGTGAACCAAAAAA--CCTTTCGCTTCGGCAGCCGCGCTGGTTGGG---------AACAGCCTGC---GCTTCAGCCTGACGTTAGCACCAAACATCA-AAACTTGCAGTCAAAAA-CATTGTCTGAT-ACCAAA-TTTTCGAATGAAAATCAAAACTTTCAACAACGGATCTCTTGGTTCCCGCATCGATGAAGAACGCAGCGAAACGCGATAGTTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCATTGGTATTCCATTGGGCATGTCTGTTTGAGCGTCATTACAACCC-TCGGTCACCACCGGTTTTGAGCCAGCCGGGT---CCTCGGGCCCGACCGGCTTTAAAGTTGTAAGCTCTGCTGCCCG-CCCGGCCCGATCAGAACA-TAGTAAAACCTAC---TTGCTCA-CGGTCTAG-----TCGAAGCGGTGCGGCCTGGATAAAACCTACCCAACTCTAAGGTTTGACCTCAGATCAGACAAG--ATACCC-GCT
Monacrosporium_leptosporum            GCGGAAGGATCATTACCAAT-CAG--GCTGTCTA------GGCTGCAAAGC----CCTGAC--GCTTTCAACCCATTGTGAACCAAAAAA--CCTTTCGCTTCGGCAGCTGC-CCGGTTGGA---------AACA-CCCA---GGCGTCAGCCTGCCGCTAGCACAAACC-AAA-AAACTTGCAGAAAA--C-CTCTGTCTGATAACCAAA-TTTTCGAATGAAAATTAAAACTTTCAACAACGGATCTCTTGGTTCCCGCATCGATGAAGAACGCAGCGAAACGCGATAGTTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCATTGGTATTCCATTGGGCATGTCTGTTTGAGCGTCATTACAACCC-TCGGTACCAACCGGTTTTGAGCGAGCGCGGG---TCCTTACCCGGGCTGGCTTTAAAGTTGTAAGCTCTGCTGGCTGCTCA-GCCCAACCAGAACA-TAGTAAAACCTAC---TTGTTCAGCGGTCAGG-----TTGAAGCGGTACGGCCTGAACAAAACCTACCCAACTCTAAGGTTTGACCTCAGATCAGATAAGG-ATACCC-GCT
Monacrosporium_lysipagum              GCGGAAGGATCATTACCAATTCAT---GTCTCCC------GGCCGTAAGGT----CGGTGCAGGC--TCAACCCTTTGTGAACCAAAAAAAACCTTTTGCTTCGGCAGCAGC-TCGGTTGGC---------AACAGCCTCT---GCATCAGCCTGCCGGTAGCACCAA-CATCATAAACTTGCAGTTAACAAACATTGTCTGAACACCAAA-TTTTCGAATGAAAATCAAAACTTTCAACAACGGATCTCTTGGTTCCCGCATCGATGAAGAACGCAGCGAAACGCGATAGTTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCATTGGTATTCCATTGGGCATGTCTGTTTGAGCGTCATTACAACCC-TCGGTCACCACCGGTTTTGAGCAAGCGAGGT---CCCCGGACCCGGCTGGCTTTAAAGTTGTAAGCTCTGCTGGCTG-CCAGGCCCGACCAGAACA-TAGTAAAA-CCATG--CTTGTTCACGGTCCGCGG---TCGAAGCGGTACGGCCTGAACAATACCTACCAC-CTCTCAGGTTTGGTACCTCCCAGGCTGATT-GTGCCATTCT
Monacrosporium_mammillatum            GCGGAAGGATCATTACCAAAA-TT-AGCTGTCT-------GGCCGCAAGGC----TCTGAC--GCTT-CAACCCTTTGTGAACCAAAAAA--CCTTTCGCTTCGGCAGCCGCGCCGGTTGGG---------AACAGCCCGC---GCTTCAGCCTGCCGTTAGCACCAAACATCA-AAACTTGCAGTCAAAAA-CATTGTCTGAT-ACCAAA-TTTTCGAATGAAAATCAAAACTTTCAACAACGGATCTCTTGGTTCCCGCATCGATGAAGAACGCAGCGAAACGCGATAGTTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCATTGGTATTCCATTGGGCATGTCTGTTTGAGCGTCATTACAACCC-TCGGTCACCACCGGTTTTGAGCCAGCCGGGT---CCTCGGGCCCGACCGGTTTTAAAGTTGTAAGATCTGCTGCCCGTCCCGGCCCGATCAGGACA-TAGTAAAACCTAC---TTGCTCA-CGGTCGAG-----TCGAAGCGGTGCGGCCTGGATAAAACCTACCCAACTCTAAGGTTTGACCTCAGATCAGACAAGGAATACCC-GCT
Monacrosporium_parvicolle             GCGGAAGGATCATTACCAAACAAAAAGTGATTCCGGGTCAGGCCGCGAGGCATGGCCCGTTAACACTCCAACCCTCTGTGAACCAAAAAA--CCTTTCGCTTCGGCAGCAGC-CCGGTTGGA------AGCAACCGCCCG-----CGTCAGCCTGCCGCTAGCACCAAAAAACA-AAACTTGCAGTAAA--A-CATTGTCTGATAACCATA-TTTTCGAATGAAAATTAAAACTTTCAACAACGGATCTCTTGGTTCCCGCATCGATGAAGAACGCAGCGAAACGCGATAGTTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCATTGGTATTCCATTGGGCATGTCTGTTTGAGCGTCATTACAACCC-TCGGTCACAACCGGTTTTGAGTTGGCCCGGG---CCTCGCGCCCCGCCCGCTTTAAAGTTGTAAGCTCTGCTGGCCT-CCGCGCCCGACCAGAACA-TAGTAAATCTCATGCCTTGTTCAACGGTTAAG-----CACGGACGGTTCGGCCTGAACAAAACCTCCAAA--CTCAAGGTTTGGTACCTCCCAGGCCGATT-GTGCCATTCT
Monacrosporium_phymatopagum           GCGGAAGGATCATTACCAAAACTT-AGCTGTCT-------GGCCGCAAGGC----CGTGAC--GCTT-CAACCCTTTGTGAACCAAAAAAA-CCTTTCGCTTCGG---CAGC-TGGGCCGG--CTGGAGACAGCCGCTC------CGTCAGCCTGCCGTTAGCACCAACCTTCA-AAACTTGCAGTCAAAAA-CATTGTCTGAACACCAAA-TTTTCGAATGAAAATCAAAACTTTCAACAACGGATCTCTTGGTTCCCGCATCGATGAAGAACGCAGCGAAACGCGATAGTTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCATTGGTATTCCGATGGGCATGTCTGTTTGAGCGTCATTACAACCC-TCGGCTCCAGCCGGTTTGGAGCGCGCCTGGC-CATCACGGCCCTGGCTAGCTTTAAAGTTGTAAGCTCTGCTGACCGCTCCTGCTGAACCAGAACAATAGTAAAATTTATT--CTACTTGTTCGCAAGGCGAAGCTCTGGCGGTTCGGCCTGAACAAAACCTACCAAA-CCTAAGGTTTGACCTCAGATCAGACAAGG-ATACCC-GCT
Monacrosporium_tentaculatum           GCGGAAGGATCATTACCAAAACAATAGCTGTCT-------GGCCGCAAGGC----CCTGAC--GCTT-CAACCCTTTGTGAACCAAAAAA--CCATTCGCTTCGGCAGCAGC-CAGGTCAGA---------AACGGCCCG---GTTGTCAGCCTGCCGCTAGCACAACCCCTCA-AAACTTGCAGTTGA--A-CAATGTCTGACAACCAAA-TTTTCGAATGAAAATTAAAACTTTCAACAACGGATCTCTTGGTTCCCGCATCGATGAAGAACGCAGCGAAACGCGATAGTTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCATTGGTATTCCATTGGGCATGTCTGTTTGAGCGTCATTACAACCC-TCGGTTCCAACCGGTTTTGAGCGTGCCCGGG---TCCCCGACCCGGCCGGCTTTAAAGTTGTAAGCTCTGCTGCCCGCCCA-GCCCGGCCAGAACA-TAGTAAAAACTAC---TTGTTCC-CGGTCAGGA----TTGAAGCGGTGCGGCCTGAACAATACCTACCAAACTCTTAGGTTTGACCTCAGATCAGACAAGG-ATACCC-GCT
;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions (CHARACTERS = ITS) = 
		N: 1-603;
CODONPOSSET  CodonPositions (CHARACTERS = ITS) = 
		N: 1-603;
END;