#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 17, 2024; 12:26 GMT TreeBASE (cc) 1994-2008 Study reference: Peterson S., Bayer E., & Wicklow D. 2004. Penicillium thiersii, Penicillium angulare and Penicillium decaturense, new species isolated from wood-decay fungi in North America and their phylogenetic placement from multilocus DNA sequence analysis. Mycologia, null. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S1286] BEGIN TAXA; TITLE 'tef 1-alpha'; DIMENSIONS NTAX=19; TAXLABELS Penicillium_chrzaszczii Penicillium_decaturense_NRRL_28119 Penicillium_decaturense_NRRL_28152 Penicillium_decaturense_NRRL_28160 Penicillium_decaturense_NRRL_29675 Penicillium_decaturense_NRRL_29708 Penicillium_decaturense_NRRL_29807 Penicillium_decaturense_NRRL_29828 Penicillium_decaturense_NRRL_29840 Penicillium_jensenii Penicillium_mangini Penicillium_miczynskii_NRRL_1077 Penicillium_miczynskii_NRRL_28096 Penicillium_riobajaense_NRRL_29685 Penicillium_riobajaense_NRRL_29736 Penicillium_rivolii Penicillium_rolfsii Penicillium_waksmanii_NRRL_28095 Penicillium_waksmanii_NRRL_777 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M2857] TITLE 'tef 1-alpha'; LINK TAXA = 'tef 1-alpha'; DIMENSIONS NCHAR=1119; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Penicillium_chrzaszczii CAAGTCCACCACCACCG--------------------------------------------------------------------------------GTCACTTG---------------------------------------------------------------------ATCTACAAGTGCGGTGGTATCGACACTCGTACCATCGAGAAGTTCGAGAAG----------------------------------------------------------------------------------GAGGCTGCTGAGCTCGGAAAGGGTTCCTTCAAGGTTCGTTCAACCATCCATCCACATACCCAACCTATATGGAAGACTTTTTCTTCTTC--------------------TTTTTCTT-CATCATGCTGACCCATT-CAATAGTATGCCTGGGTTCTCGACAAGCTCAAGGCTGAGCGTGAGCGTGGTATCACCATCGATATCGCTCTGTGGAAGTTCCAGACCGCCAAGTTCGAGGTTACCGTCATTG---------------------------------------------------------------------------------------------ATGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCCCAGGCCGATTGCGCCATTCTCATCATCGCCTCCGGCACTGGTGAGTTCGAGGCTGGTATCTCCAAGGACGGC---------------------------------------------------------CAGGTAAGCATCCCACTCACACACACAATTAAAATAACTCTAAT-CTAACTAAATTTTCCAG-----ACCCGCGAGCACGCCCTTCTGGCTTTCACCCTTGGTGTCCGCCAGCTCATTGTTGCCCTCAACAAGATGGACACTGCCAAGTGGGCCCAGGCCCGTTACGACGAGATCGTCAAGGAGACCTCCAACTTCATCAAGAAGGTTGGCTTCAACCCCAAGACCGTTCCCTTCGTCCCCATCTCCGGCTTCAACGGTGACAACATGCTTGAGCCTTCCCCCAACTGCCCC Penicillium_decaturense_NRRL_28119 CAAGTCCACCACCACCG--------------------------------------------------------------------------------GTCACTTG---------------------------------------------------------------------ATCTACAAGTGCGGTGGTATCGACTCTCGTACCATCGAGAAGTTCGAGAAG----------------------------------------------------------------------------------GAGGCTGCTGAGCTCGGAAAGGGTTCCTTCAAGGTTCGTTCAACCATCCATCCACATACCGATCCTACCCATCCTACC------------------TATCCTACATCCAAGACTCTTTCATCATACTGACCCATT-CAATAGTATGCCTGGGTTCTCGACAAGCTCAAGGCTGAGCGTGAGCGTGGTATCACCATCGATATTGCTCTCTGGAAGTTCCAGACCGCCAAGTTCGAGGTTACCGTCATTG---------------------------------------------------------------------------------------------ATGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCCCAGGCCGATTGCGCTATTCTCATCATCGCCTCCGGCACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGC---------------------------------------------------------CAG----------------------------------------------------------------ACTCGCGAGCACGCTCTTCTCGCTTTCACCCTCGGTGTCCGTCAGCTCATTGTTGCCCTCAACAAGATGGACACTGCCAAGTGGGCCCAGGCCCGTTACGACGAGATCGTCAAGGAGACCTCCAACTTCATCAAGAAGGTCGGCTTCAACCCCAAGACTGTTCCCTTCGTCCCCATCTCCGGCTTCAACGGTGACAACATGCTTGAGCCTTCCCCCAACTGCCCC Penicillium_decaturense_NRRL_28152 CAAGTCCACCACCACCG--------------------------------------------------------------------------------GTCACTTG---------------------------------------------------------------------ATCTACAAGTGCGGTGGTATCGACTCTCGTACCATCGAGAAGTTCGAGAAG----------------------------------------------------------------------------------GAGGCTGCTGAGCTCGGAAAGGGTTCCTTCAAGGTTCGTTCAACCATCCATCCACATACCGATCCTACCCATCCTACC---------CATCCTACCTATCCTACATCCAAGACTTTTCCATCATACTGACCCATT-CAATAGTATGCCTGGGTTCTCGACAAGCTCAAGGCTGAGCGTGAGCGTGGTATCACCATCGATATTGCTCTCTGGAAGTTCCAGACCGCCAAGTTCGAGGTTACCGTCATTG---------------------------------------------------------------------------------------------ATGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCCCAGGCTGATTGCGCTATTCTCATCATCGCCTCCGGCACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGC---------------------------------------------------------CAG----------------------------------------------------------------ACTCGCGAGCACGCTCTTCTCGCTTTCACCCTCGGTGTCCGTCAGCTCATTGTTGCCCTCAACAAGATGGACACTGCCAAGTGGGCCCAGGCCCGTTACGACGAGATCGTCAAGGAGACCTCCAACTTCATCAAGAAGGTCGGCTTCAACCCCAAGACTGTTCCCTTCGTCCCCATCTCCGGCTTCAACGGTGACAACATGCTTGAGCCTTCCCCCAACTGCCCC Penicillium_decaturense_NRRL_28160 CAAGTCCACCACCACCG--------------------------------------------------------------------------------GTCACTTG---------------------------------------------------------------------ATCTACAAGTGCGGTGGTATCGACTCTCGTACCATCGAGAAGTTCGAGAAG----------------------------------------------------------------------------------GAGGCTGCTGAGCTCGGAAAGGGTTCCTTCAAGGTTCGTTCAACCATCCATCCACATACCGATCCTACCCATCCTACCTATCCTCCCCATCCTACCCATCCTACATCCAAGACTTTTCCATCATACTGACCCATT-CAATAGTATGCCTGGGTTCTCGACAAGCTCAAGGCTGAGCGTGAGCGTGGTATCACCATCGATATTGCTCTCTGGAAGTTCCAGACCGCCAAGTTCGAGGTTACCGTCATTG---------------------------------------------------------------------------------------------ATGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCCCAGGCCGATTGCGCTATTCTCATCATCGCCTCCGGCACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGC---------------------------------------------------------CAG----------------------------------------------------------------ACTCGCGAGCACGCTCTTCTCGCTTTCACCCTCGGTGTCCGTCAGCTCATTGTTGCCCTCAACAAGATGGACACTGCCAAGTGGGCCCAGGCCCGTTACGACGAGATCGTCAAGGAGACCTCCAACTTCATCAAGAAGGTCGGCTTCAACCCCAAGACTGTTCCCTTCGTCCCCATCTCCGGCTTCAACGGTGACAACATGCTTGAGCCTTCCCCCAACTGCCCC Penicillium_decaturense_NRRL_29675 CAAGTCCACCACCACCG--------------------------------------------------------------------------------GTCACTTG---------------------------------------------------------------------ATCTACAAGTGCGGTGGTATCGACTCTCGTACCATCGAGAAGTTCGAGAAG----------------------------------------------------------------------------------GAGGCTGCTGAGCTCGGAAAGGGTTCCTTCAAGGTTCGTTCAACCATCCATCCACATACCGATCCTACCCATCCTACC------------------TATCCTACATCCAAGACTCTTTCATCATACTGACCCATT-CAATAGTATGCCTGGGTTCTCGACAAGCTCAAGGCTGAGCGTGAGCGTGGTATCACCATCGATATTGCTCTCTGGAAGTTCCAGACCGCCAAGTTCGAGGTTACCGTCATTG---------------------------------------------------------------------------------------------ATGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCCCAGGCCGATTGCGCTATTCTCATCATCGCCTCCGGCACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGC---------------------------------------------------------CAG----------------------------------------------------------------ACTCGCGAGCACGCTCTTCTCGCTTTCACCCTCGGTGTCCGTCAGCTCATTGTTGCCCTCAACAAGATGGACACTGCCAAGTGGGCCCAGGCCCGTTACGACGAGATCGTCAAGGAGACCTCCAACTTCATCAAGAAGGTCGGCTTCAACCCCAAGACTGTTCCCTTCGTCCCCATCTCCGGCTTCAACGGTGACAACATGCTTGAGCCTTCCCCCAACTGCCCC Penicillium_decaturense_NRRL_29708 CAAGTCCACCACCACCG--------------------------------------------------------------------------------GTCACTTG---------------------------------------------------------------------ATCTACAAGTGCGGTGGTATCGACTCTCGTACCATCGAGAAGTTCGAGAAG----------------------------------------------------------------------------------GAGGCTGCTGAGCTCGGAAAGGGTTCCTTCAAGGTTCGTTCAACCATCCATCCACATACCGATCCTACCCATCATACC---------CATCCTACCTATCCTACATCCAAGACTTTTCCATCATACTGACCCATT-CAATAGTATGCCTGGGTTCTCGACAAGCTCAAGGCTGAGCGTGAGCGTGGTATCACCATCGATATTGCTCTCTGGAAGTTCCAGACCGCCAAGTTCGAGGTTACCGTCATTG---------------------------------------------------------------------------------------------ATGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCCCAGGCCGATTGCGCTATTCTCATCATCGCCTCCGGCACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGC---------------------------------------------------------CAG----------------------------------------------------------------ACTCGCGAGCACGCTCTTCTCGCTTTCACCCTCGGTGTCCGTCAGCTCATTGTTGCCCTCAACAAGATGGACACTGCCAAGTGGGCCCAGGCCCGTTACGACGAGATCGTCAAGGAGACCTCCAACTTCATCAAGAAGGTCGGCTTCAACCCCAAGACTGTTCCCTTCGTCCCCATCTCCGGCTTCAACGGTGACAACATGCTTGAGCCTTCCCCCAACTGCCCC Penicillium_decaturense_NRRL_29807 CAAGTCCACCACCACCG--------------------------------------------------------------------------------GTCACTTG---------------------------------------------------------------------ATCTACAAGTGCGGTGGTATCGACTCTCGTACCATCGAGAAGTTCGAGAAG----------------------------------------------------------------------------------GAGGCTGCTGAGCTCGGAAAGGGTTCCTTCAAGGTTCGTTCAACCATCCATCCACATACCGATCCTACCCATCCTACC------------------TATCCTACATCCAAGACTCTTTCATCATACTGACCCATT-CAATAGTATGCCTGGGTTCTCGACAAGCTCAAGGCTGAGCGTGAGCGTGGTATCACCATCGATATTGCTCTCTGGAAGTTCCAGACCGCCAAGTTCGAGGTTACCGTCATTG---------------------------------------------------------------------------------------------ATGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCCCAGGCCGATTGCGCTATTCTCATCATCGCCTCCGGCACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGC---------------------------------------------------------CAG----------------------------------------------------------------ACTCGCGAGCACGCTCTTCTCGCTTTCACCCTCGGTGTCCGTCAGCTCATTGTTGCCCTCAACAAGATGGACACTGCCAAGTGGGCCCAGGCCCGTTACGACGAGATCGTCAAGGAGACCTCCAACTTCATCAAGAAGGTCGGCTTCAACCCCAAGACTGTTCCCTTCGTCCCCATCTCCGGCTTCAACGGTGACAACATGCTTGAGCCTTCCCCCAACTGCCCC Penicillium_decaturense_NRRL_29828 CAAGTCCACCACCACCG--------------------------------------------------------------------------------GTCACTTG---------------------------------------------------------------------ATCTACAAGTGCGGTGGTATCGACTCTCGTACCATCGAGAAGTTCGAGAAG----------------------------------------------------------------------------------GAGGCTGCTGAGCTCGGAAAGGGTTCCTTCAAGGTTCGTTCAACCATCCATCCACATACCGATCCTACCCATCCTACC------------------TATCCTACATCCAAGACTCTTTCATCATACTGACCCATT-CAATAGTATGCCTGGGTTCTCGACAAGCTCAAGGCTGAGCGTGAGCGTGGTATCACCATCGATATTGCTCTCTGGAAGTTCCAGACCGCCAAGTTCGAGGTTACCGTCATTG---------------------------------------------------------------------------------------------ATGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCCCAGGCCGATTGCGCTATTCTCATCATCGCCTCCGGCACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGC---------------------------------------------------------CAG----------------------------------------------------------------ACTCGCGAGCACGCTCTTCTCGCTTTCACCCTCGGTGTCCGTCAGCTCATTGTTGCCCTCAACAAGATGGACACTGCCAAGTGGGCCCAGGCCCGTTACGACGAGATCGTCAAGGAGACCTCCAACTTCATCAAGAAGGTCGGCTTCAACCCCAAGACTGTTCCCTTCGTCCCCATCTCCGGCTTCAACGGTGACAACATGCTTGAGCCTTCCCCCAACTGCCCC Penicillium_decaturense_NRRL_29840 CAAGTCCACCACCACCG--------------------------------------------------------------------------------GTCACTTG---------------------------------------------------------------------ATCTACAAGTGCGGTGGTATCGACTCTCGTACCATCGAGAAGTTCGAGAAG----------------------------------------------------------------------------------GAGGCTGCTGAGCTCGGAAAGGGTTCCTTCAAGGTTCGTTCAACCATCCATCCACATACCGATCCTACC---------------------------TATCCTACATCCAAGACTTTTCCATCATACTGACCCATT-CAATAGTATGCCTGGGTTCTCGACAAGCTCAAGGCTGAGCGTGAGCGTGGTATCACCATCGATATTGCTCTCTGGAAGTTCCAGACCGCCAAGTTCGAGGTTACCGTCATTG---------------------------------------------------------------------------------------------ATGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCCCAGGCCGATTGCGCTATTCTCATCATCGCCTCCGGCACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGC---------------------------------------------------------CAG----------------------------------------------------------------ACTCGCGAGCACGCTCTTCTCGCTTTCACCCTCGGTGTCCGTCAGCTCATTGTTGCCCTCAACAAGATGGACACTGCCAAGTGGGCCCAGGCCCGTTACGACGAGATCGTCAAGGAGACCTCCAACTTCATCAAGAAGGTCGGCTTCAACCCCAAGACTGTTCCCTTCGTCCCCATCTCCGGCTTCAACGGTGACAACATGCTTGAGCCTTCCCCCAACTGCCCC Penicillium_jensenii CAAGTCTACCACCACTG--------------------------------------------------------------------------------GTCACTTG---------------------------------------------------------------------ATCTACAAGTGCGGTGGTATTGACCAGCGTACCATCGAGAAGTTCGAGAAGGTAATTCATCCATCCCACACTTTCATCA------------------------------CATCCATGCTGACCCCCATCATAGGAAGCCGCCGAGCTCGGTAAGGGTTCCTTCAAG-------------------------------------------------------------------------------------------------------------TACGCTTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGATATTGCCCTCTGGAAGTTCCAGACCGCCAAGTATGAGGTCACCGTCATCGGTAAGAATCTTCCC-TACCC----TCGTCCCTCCAGCCTACCAAGGTCGGATGGCTTGACTTATCCCAACATGATTCTAACCCACCCTCCCAGATGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCCCAGGCTGATTGCGCCATTCTCATCATCGCCTCCGGCACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGC---------------------------------------------------------CAG----------------------------------------------------------------ACCCGTGAGCACGCTCTGCTTGCCTTCACCCTCGGTGTTAAGCAGCTCATCGTTGCCCTCAACAAGATGGACACCTGCAAGTGGTCCGAGGAGCGTTACAACGAGATTGTCAAGGAGACCTCCAACTTCATCAAGAAGGTCGGCTACAACCCCAAGTCCGTTCCCTTCGTCCCCATCTCCGGCTTCAACGGCGACAACATGCTCGAGCCCTCCCCCAACTGCCCC Penicillium_mangini CAAGTCTACCACTACTG--------------------------------------------------------------------------------GTCACTTGGTAAGAAATATCTCCCTCATATCCCACAGTCCTTGAGGAAACAATACTAACATCTCTTCCCTCTTCCAGATCTACAAGTGCGGTGGTATTGACTCCCGTACTATTGAGAAGTTCGAGAAG----------------------------------------------------------------------------------GAGGCTGCTGAGCTCGGAAAGGGTTCCTTCAAGGTTGGTTCCACCCACATCAAATATCCCCAAATACAATATG------------------------------------------TT-CATCATGCTGACCCATT-CAATAGTATGCCTGGGTTCTTGACAAGCTCAAGGCTGAGCGTGAGCGTGGTATCACCATCGATATCGCTCTGTGGAAGTTCCAGACCGCCAAGTTCGAGGTCACCGTCATTG---------------------------------------------------------------------------------------------ATGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCCCAGGCCGATTGCGCTATTCTCATCATCGCCTCCGGCACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGC---------------------------------------------------------CAG----------------------------------------------------------------ACTCGCGAGCACGCCCTTCTCGCTTTCACCCTCGGTGTCCGTCAGCTCATTGTTGCCCTCAACAAGATGGACACTGCCAAGTGGGCCCAGGCCCGTTACGACGAGATCGTCAAGGAGACCTCCAACTTCATCAAGAAGGTTGGCTTCAACCCCAAGACCGTTCCCTTCGTCCCCATCTCCGGTTTCAACGGTGACAACATGCTTGAGCCTTCCCCCAACTGCCCC Penicillium_miczynskii_NRRL_1077 CAAGTCCACCACCACCG--------------------------------------------------------------------------------GTCACTTG---------------------------------------------------------------------ATCTACAAGTGCGGTGGTATCGACTCTCGTACCATCGAGAAGTTCGAGAAG----------------------------------------------------------------------------------GAGGCTGCTGAGCTCGGCAAGGGTTCCTTCAAGGTTCGTTCAACCCATACCACACCCATCCATCCCCCTATCTACCCTAAACTTGGAGGAGGT----------------------TT-CATCATGCTGACCCATT-CAATAGTATGCCTGGGTTCTCGACAAGCTCAAGGCTGAGCGTGAGCGTGGTATCACCATCGATATCGCTCTGTGGAAGTTCCAGACCGCCAAGTTCGAGGTTACCGTCATCG---------------------------------------------------------------------------------------------ATGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCCCAGGCCGATTGCGCTATTCTCATCATCGCCTCCGGCACTGGTGAGTTCGAGGCTGGTATCTCCAAGGACGGTGTATGTACTTCTTCAACTCCATCTTACTCTCAGAATTCAATT-CTAACAACACCTAGCAA----------------------------------------------------------------ACCCGTGAGCACGCTCTGCTTGCGTTCACCCTTGGTGTCCGCCAGCTCATCGTCGCCCTGAACAAGATGGACACTGCCAAGTGGGCCCAGGCTCGTTACGACGAGATTGTTAAGGAGACCTCCAACTTCATCAAGAAGGTCGGCTTCAACCCCAAGAACGTTCCCTTCGTCCCCATCTCCGGTTTCAACGGTGACAACATGCTCGAGCCTTCCCCCAACTGCCCC Penicillium_miczynskii_NRRL_28096 CAAGTCCACCACCACCG--------------------------------------------------------------------------------GTCACTTG---------------------------------------------------------------------ATCTACAAGTGCGGTGGTATCGACTCTCGTACCATCGAGAAGTTCGAGAAG----------------------------------------------------------------------------------GAGGCTGCTGAGCTCGGCAAGGGTTCCTTCAAGGTTCGTTCAACCCATACCACACCCATCCATCCCCCTATCTACCCTAAACTTGGAGGAGGT----------------------TT-CATCATGCTGACCCATT-CAATAGTATGCCTGGGTTCTCGACAAGCTCAAGGCTGAGCGTGAGCGTGGTATCACCATCGATATCGCTCTGTGGAAGTTCCAGACCGCCAAGTTCGAGGTTACCGTCATCG---------------------------------------------------------------------------------------------ATGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCCCAGGCCGATTGCGCTATTCTCATCATCGCCTCCGGCACTGGTGAGTTCGAGGCTGGTATCTCCAAGGACGGTGTATGTACTTCTTCAACTCCATCTTACTCTCAGAATTCAATT-CTAACAACACCTAGCAA----------------------------------------------------------------ACCCGTGAGCACGCTCTGCTTGCGTTCACCCTTGGTGTCCGCCAGCTCATCGTCGCCCTGAACAAGATGGACACTGCCAAGTGGGCCCAGGCTCGTTACGACGAGATTGTTAAGGAGACCTCCAACTTCATCAAGAAGGTCGGCTTCAACCCCAAGAACGTTCCCTTCGTCCCCATCTCCGGTTTCAACGGTGACAACATGCTCGAGCCTTCCCCCAACTGCCCC Penicillium_riobajaense_NRRL_29685 CAAGTCTACCACTACTG--------------------------------------------------------------------------------GTCACTTGGTAAGAAATATCTCCCTCATATCCGACAGTCTTTGAGGAAACAATACTAACATTTCTTCCCGCTTCCAGATCTACAAGTGCGGTGGTATTGACTCCCGTACTATTGAGAAGTTCGAGAAG----------------------------------------------------------------------------------GAGGCTGCTGAGCTCGGAAAGGGTTCCTTCAAGGTTGGTTCCACCCACACCATATAAATTCACATACATTAAG------------------------------------------TT-CATCATACTGACCCATT-CAATAGTATGCCTGGGTTCTTGACAAGCTCAAGGCTGAGCGTGAGCGTGGTATCACCATCGATATCGCTCTGTGGAAGTTCCAGACCGCCAAGTTCGAGGTCACCGTCATTG---------------------------------------------------------------------------------------------ATGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCCCAGGCCGATTGCGCTATCCTCATCATCGCCTCCGGCACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGC---------------------------------------------------------CAG----------------------------------------------------------------ACTCGCGAGCACGCCCTTCTCGCTTTCACCCTCGGTGTCCGTCAGCTCATTGTTGCCCTCAACAAGATGGACACTGCCAAGTGGGCCCAGGCCCGTTACGACGAGATCGTCAAGGAGACCTCCAACTTCATCAAGAAGGTTGGCTTCAACCCCAAGACCGTTCCCTTCGTCCCCATCTCCGGTTTCAACGGTGACAACATGCTTGAGCCTTCCCCCAACTGCCCC Penicillium_riobajaense_NRRL_29736 CAAGTCTACCACTACTG--------------------------------------------------------------------------------GTCACTTGGTAAGAAATATCTCCCTCATATCCGACAGTCTTTGAGGAAACAATACTAACATTTCTTCCCGCTTCCAGATCTACAAGTGCGGTGGTATTGACTCCCGTACTATTGAGAAGTTCGAGAAG----------------------------------------------------------------------------------GAGGCTGCTGAGCTCGGAAAGGGTTCCTTCAAGGTTGGTTCCACCCACACCATATAAATTCACATACATTAAG------------------------------------------TT-CATCATACTGACCCATT-CAATAGTATGCCTGGGTTCTTGACAAGCTCAAGGCTGAGCGTGAGCGTGGTATCACCATCGATATCGCTCTGTGGAAGTTCCAGACCGCCAAGTTCGAGGTCACCGTCATTG---------------------------------------------------------------------------------------------ATGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCCCAGGCCGATTGCGCTATCCTCATCATCGCCTCCGGCACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGC---------------------------------------------------------CAG----------------------------------------------------------------ACTCGCGAGCACGCCCTTCTCGCTTTCACCCTCGGTGTCCGTCAGCTCATTGTTGCCCTCAACAAGATGGACACTGCCAAGTGGGCCCAGGCCCGTTACGACGAGATCGTCAAGGAGACCTCCAACTTCATCAAGAAGGTCGGCTTCAACCCCAAGACCGTTCCCTTCGTCCCCATCTCCGGTTTCAACGGTGACAACATGCTTGAGCCTTCCCCCAACTGCCCC Penicillium_rivolii CAAGTCCACCACCACCG--------------------------------------------------------------------------------GTCACTTG---------------------------------------------------------------------ATCTACAAGTGCGGTGGTATCGACACTCGTACCATCGAGAAGTTCGAGAAG----------------------------------------------------------------------------------GAGGCTGCTGAGCTCGGAAAGGGTTCCTTCAAGGTTCGTTCAACCATCCATCCACATACCCAACCTATATGGAAGGGTTTGTCTTCTTTTTT-----------------TTTCTCTT-CATCATGCTGACCCACT-CAATAGTATGCCTGGGTTCTCGACAAGCTGAAGGCTGAGCGTGAGCGTGGTATCACCATCGATATCGCTCTGTGGAAGTTCCAGACCGCCAAGTTCGAGGTTACCGTCATTG---------------------------------------------------------------------------------------------ATGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCCCAGGCCGATTGCGCCATTCTCATCATCGCCTCCGGCACTGGTGAGTTCGAGGCTGGTATCTCCAAGGACGGC---------------------------------------------------------CAGGTAAGCATCCCACTCACACTCACAATTAAAATAACTTCAAT-CTAACTAAG-TTTCCAG-----ACCCGCGAGCACGCCCTTCTGGCTTTCACCCTTGGTGTCCGTCAGCTCATTGTTGCCCTCAACAAGATGGACACTGCCAAGTGGGCCCAGGCCCGTTACGACGAGATCGTCAAGGAGACCTCCAACTTCATCAAGAAGGTTGGCTTCAACCCCAAGACCGTTCCCTTCGTCCCCATCTCCGGCTTCAACGGTGACAACATGCTTGAGCCTTCCCCCAACTGCCCC Penicillium_rolfsii CAAGTCCACCACTACCGGTAAGCATCCCTCCCCATACAATCGTGCCTCCTCCATCGAGGTTCCATCCAGCATAACAATTTACTGATCCCCTGAATAGGTCACTTG---------------------------------------------------------------------ATCTACAAGTGCGGTGGTATCGACTCTCGTACCATCGAGAAGTTCGAGAAGGTATGGAATCACAATTTTCACCTGCCCCTCCATGAGTGGGGCCTTGCTTAAAAAAAAACTTGATGCTGACTCCTCCTTATAGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAG-------------------------------------------------------------------------------------------------------------TACGCCTGGGTTCTTGACAAGCTGAAGGCTGAGCGTGAGCGTGGTATCACCATCGATATCGCTCTCTGGAAGTTCCAGACCGCCAAGTATGAGGTCACCGTCATTGGTAAGAATCATCCCAACCTGCTGGCCCCATCCTCCTAGGACATCCTTTCCTAACATACTTTCTTCCTCTAG----------------------ATGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCCCAGGCCGATTGCGCTATCCTCATCATCGCCTCCGGCACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGC---------------------------------------------------------CAG----------------------------------------------------------------ACTCGTGAGCACGCTCTGCTCGCTTTCACCCTCGGTGTCCGTCAGCTCATTGTTGCCCTCAACAAGATGGACACCTGCAAGTGGTCCGAGGACCGCTACAACGAGATTGTCAAGGAGACCTCCAACTTCATCAAGAAGGTTGGCTACAACCCCAAGAGCGTCCCCTTCGTCCCCATCTCCGGCTTCAACGGTGACAACATGCTTGAGCCCTCCCCCAACTGCCCC Penicillium_waksmanii_NRRL_28095 CAAGTCCACCACCACCG--------------------------------------------------------------------------------GTCACTTG---------------------------------------------------------------------ATCTACAAGTGCGGTGGTATCGACACTCGTACCATCGAGAAGTTCGAGAAG----------------------------------------------------------------------------------GAGGCTGCTGAGCTCGGAAAGGGTTCCTTCAAGGTTCGTTCAACCATCCATCCACATACCCAACCTATATGGAAGGGTTTGTCTTCTTTT-------------------TTTCTCTT-CATCATGCTGACCCATT-CAATAGTATGCCTGGGTTCTCGACAAGCTGAAGGCTGAGCGTGAGCGTGGTATCACCATCGATATCGCTCTGTGGAAGTTCCAGACCGCCAAGTTCGAGGTTACCGTCATTG---------------------------------------------------------------------------------------------ATGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCCCAGGCCGATTGCGCCATTCTCATCATCGCCTCCGGCACTGGTGAGTTCGAGGCTGGTATCTCCAAGGACGGC---------------------------------------------------------CAGGTAAGCATCCCACTCACACTCACAATTAAAATAACTTCAAT-CTAACTAAG-TTTCCAG-----ACCCGCGAGCACGCCCTTCTGGCTTTCACCCTTGGTGTCCGTCAGCTCATTGTTGCCCTCAACAAGATGGACACTGCCAAGTGGGCCCAGGCCCGTTACGACGAGATCGTCAAGGAGACCTCCAACTTCATCAAGAAGGTTGGCTTCAACCCCAAGACCGTTCCCTTCGTCCCCATCTCCGGCTTCAACGGTGACAACATGCTTGAGCCTTCCCCCAACTGCCCC Penicillium_waksmanii_NRRL_777 CAAGTCCACCACCACCG--------------------------------------------------------------------------------GTCACTTG---------------------------------------------------------------------ATCTACAAGTGCGGTGGTATCGACACTCGTACCATCGAGAAGTTCGAGAAG----------------------------------------------------------------------------------GAGGCTGCTGAGCTCGGAAAGGGTTCCTTCAAGGTTCGTTCAACCATCCATCCACATACCCAACCTATATGGAAGGGTTTGTCTTCTTTTTT-----------------TTTCTCTT-CATCATGCTGACCCACT-CAATAGTATGCCTGGGTTCTCGACAAGCTGAAGGCTGAGCGTGAGCGTGGTATCACCATCGATATCGCTCTGTGGAAGTTCCAGACCGCCAAGTTCGAGGTTACCGTCATTG---------------------------------------------------------------------------------------------ATGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCCCAGGCCGATTGCGCCATTCTCATCATCGCCTCCGGCACTGGTGAGTTCGAGGCTGGTATCTCCAAGGACGGC---------------------------------------------------------CAGGTAAGCATCCCACTCACACTCACAATTAAAATAACTTCAAT-CTAACTAAG-TTTCCAG-----ACCCGCGAGCACGCCCTTCTGGCTTTCACCCTTGGTGTCCGTCAGCTCATTGTTGCCCTCAACAAGATGGACACTGCCAAGTGGGCCCAGGCCCGTTACGACGAGATCGTCAAGGAGACCTCCAACTTCATCAAGAAGGTTGGCTTCAACCCCAAGACCGTTCCCTTCGTCCCCATCTCCGGCTTCAACGGTGACAACATGCTTGAGCCTTCCCCCAACTGCCCC ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = 'tef 1-alpha') = N: 1-1119; CODONPOSSET CodonPositions (CHARACTERS = 'tef 1-alpha') = N: 1-1119; END;