#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 18, 2024; 7:31 GMT TreeBASE (cc) 1994-2008 Study reference: De meyer E., Beer Z., Summerbell R., Moharram A., Hoog G., Vismer H., & Wingfield M.J. 2008. Taxonomy and phylogeny of new wood- and soil-inhabiting Sporothrix species in the Ophiostoma stenoceras - Sporothrix schenckii complex. Mycologia, null. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S2018] BEGIN TAXA; TITLE TaxonLabelSet13592; DIMENSIONS NTAX=58; TAXLABELS Ophiostoma_africanum_DQ316159 Ophiostoma_africanum_DQ316162 Ophiostoma_aurorae_DQ396800_T Ophiostoma_aurorae_DQ396801 Ophiostoma_dentifundum_AY495445_T Ophiostoma_dentifundum_AY495446 Ophiostoma_fusiforme_AY280461_T Ophiostoma_fusiforme_AY280465 Ophiostoma_lunatum_AY280465_T Ophiostoma_lunatum_AY280467 Ophiostoma_nigrocarpum_AY280479_T Ophiostoma_nigrocarpum_AY280480 Ophiostoma_palmaculminatum_DQ316153_T Ophiostoma_palmaculminatum_DQ316154 Ophiostoma_phasma_DQ316181_T Ophiostoma_phasma_DQ316184 Ophiostoma_protearum_DQ316163 Ophiostoma_protearum_DQ316165 Ophiostoma_splendens_DQ296071 Ophiostoma_splendens_DQ316166 Ophiostoma_stenoceras_AY280471_T Ophiostoma_stenoceras_AY280473 Sporothrix_albicans_CBS302.73_T Sporothrix_humicola_CMW7617 Sporothrix_humicola_CMW7618_T Sporothrix_inflata_AY495437_T Sporothrix_inflata_AY495442 Sporothrix_lignivora_CMW18597 Sporothrix_lignivora_CMW18598 Sporothrix_lignivora_CMW18599 Sporothrix_lignivora_CMW18600_T Sporothrix_lignivora_CMW18601 Sporothrix_mexicanus_AM498344_T Sporothrix_nivea_CBS150.87_T Sporothrix_pallida_CBS131.56_T Sporothrix_pallida_CBS182.63 Sporothrix_schenckii_AM116910 Sporothrix_schenckii_AM116911_T Sporothrix_schenckii_AM116916_Bolivia Sporothrix_schenckii_AM116921_Colombia Sporothrix_schenckii_AM116922_Argentina Sporothrix_schenckii_AM116923_Peru Sporothrix_schenckii_AM116925_SA Sporothrix_schenckii_AM116926_Peru Sporothrix_schenckii_AM116928_Peru Sporothrix_schenckii_AM116946_Brazil_T Sporothrix_schenckii_AM116952_Brazil Sporothrix_schenckii_AM116954_Brazil Sporothrix_schenckii_AM116964_Spain Sporothrix_schenckii_AM116966_Spain_T Sporothrix_schenckii_AM261687_Brazil Sporothrix_schenckii_AY280477_SA Sporothrix_schenckii_var._luriei_CBS937.72_T Sporothrix_stylites_CMW14541 Sporothrix_stylites_CMW14542 Sporothrix_stylites_CMW14543_T Sporothrix_stylites_CMW14544 Sporothrix_stylites_CMW7133 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M3223] TITLE Beta_tubulin; LINK TAXA = TaxonLabelSet13592; DIMENSIONS NCHAR=286; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Ophiostoma_africanum_DQ316159 CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-CAGTATTCACAGCTTTCTTACTGT-ACAGCAGTTGGGACGGC--------------------------------------CTCCTAACAGTTGATTTCTAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTCGTCGATCTGGAGCCCGGTACCATGGACGCCGTCC--------GCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCTGACAACTTCGTCTTCGG Ophiostoma_africanum_DQ316162 CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-CAGTATTCTCAGCTTTCTTACTGT-ACAGCAGTTGGGACGGC--------------------------------------TTCCTAACAGTTGATTTCTAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTCGTCGATCTGGAGCCCGGTACCATGGACGCCGTCC--------GCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCTGACAACTTCGTCTTCGG Ophiostoma_aurorae_DQ396800_T CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-CAGTATTCTCAC--------ACATTGTTGAATGATAAACAGC--------------------------------------CTTCTAACA-----ACTTTAGGCCTCCGGCAACAAGTACGTTCCCCGTGCCGTCCTTGTTGATCTTGAGCCCGGTACCATGGACGCCGTCC--------GCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Ophiostoma_aurorae_DQ396801 CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-CAGTATTCTCAC--------ACATTGTTGAATGATAAACAGC--------------------------------------CTTCTAACA-----ACTTTAGGCCTCCGGCAACAAGTACGTTCCCCGTGCCGTCCTTGTTGATCTTGAGCCCGGTACCATGGACGCCGTCC--------GCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Ophiostoma_dentifundum_AY495445_T CTACAACGGCACCTCCGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TTGT--------------------------CCAGCTACCGGCTTTTGGCGTCGTGTTACGGC-ATGGGCAACCAA-----CTAACCGTT----TTCGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCTGTGCTCGTCGATCTCGAGCCCGGCACCATGGACGCTGTCC--------GCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Ophiostoma_dentifundum_AY495446 CTACAACGGCACCTCCGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TTGT--------------------------CCAGCTACCGGCTTTTGGCGTCGTGTTACGGC-ATGGGCAACCAA-----CTAACCGTT----TTCGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCTGTGCTCGTCGATCTCGAGCCCGGCACCATGGACGCTGTCC--------GCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Ophiostoma_fusiforme_AY280461_T CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-CAGT----CCAGCCCACCCAGTGTGAAAACGATATGAACAGC--------------------------------------TTCCTAACA----TTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCGGTCCTTGTCGATCTTGAGCCCGGTACCATGGACGCCGTCC--------GCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTTGTCTTCGG Ophiostoma_fusiforme_AY280465 CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-CAGT----CCAGCCCACCCAGTGTGAAAACGATATGAACAGC--------------------------------------TTCCTAACA----TTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTTGAGCCCGGTACCATGGACGCCGTCC--------GCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTTGTCTTCGG Ophiostoma_lunatum_AY280465_T CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-CAGT----CCAGCCCACCCAGTGTGAAAACGATACGAACAGC--------------------------------------TTCCTAACA----TTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCCGTCCTCGTCGATCTTGAGCCCGGTACCATGGACGCCGTCC--------GCGCTGGCCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Ophiostoma_lunatum_AY280467 CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-CAGT----CCAGCCCACCCAGTGTGAAAACGATACGAACAGC--------------------------------------TTCCTAACA----TTGTGTAGGCCTCCGGCAACAAGTACGTCCCCCGTGCCGTCCTCGTCGATCTTGAGCCCGGTACCATGGACGCCGTCC--------GCGCTGGCCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Ophiostoma_nigrocarpum_AY280479_T GTACAACGGCACGTCCGACCTCCAGCTGGAGCGCCTGAGCGTCTACTTCAACGAGGT-ATGTCGAAGCAGCAGACCCGCCTCCCCTCAGCACGGAACTGGCCGTGGCGAGCGATGACCAACACACTAACCGAC-------------------CCGCCAGGCCTCGGGCAACAAGTACGTCCCCCGTGCCGTGCTGGTCGACCTCGAGCCCGGCACCATGGACGCCGTCC--------GCGCTGGCCCCTTTGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Ophiostoma_nigrocarpum_AY280480 GTACAACGGCACGTCCGACCTCCAGCTGGAGCGCCTGAGCGTCTACTTCAACGAGGT-ATGTCGAAGCAGCAGACCCGCCTCCCCTCAGCACGGAACTGGCCGTGGCGAGCGATGACCAACACACTAACCGAC-------------------CCGCCAGGCCTCGGGCAACAAGTACGTCCCCCGTGCCGTGCTGGTCGACCTCGAGCCCGGCACCATGGACGCCGTCC--------GCGCTGGCCCCTTTGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Ophiostoma_palmaculminatum_DQ316153_T CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TCGTGTTTCTCTCCATGCTAATGCTTTTTAATAGTTGGTGG---ATTATGCCGTGCCACG-----TACCACATAA-----TCTGACATT-----TTGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTCGAGCCCGGCACCATGGACGCCGTCC--------GCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Ophiostoma_palmaculminatum_DQ316154 CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TCGTGTTTCTCTCCATGCTAATGCTTTTTAATAGTTGGTGG---ATTATGCCGTGCCACG-----TACCACATAA-----TCTGACATT-----TTGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTCGAGCCCGGCACCATGGACGCCGTCC--------GCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Ophiostoma_phasma_DQ316181_T CTACAACGGCACCTCGGACCTCCAGCTGGAGCGCCTGAGCGTCTACTTCAACGAGGT-TTGTCTCGCCGCCGCGCGTGTCGCTTTGTACGTGTGATTGTGTCATGGTCCCATGCGCTAAGACC-----------------------------CATCCAGGCTTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTCGAGCCCGGCACCATGGACGCCGTCC--------GTGCCGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Ophiostoma_phasma_DQ316184 CTACAACGGCACCTCGGACCTCCAGCTGGAGCGCCTGAGCGTCTACTTCAACGAGGT-TTGTCTCGCCGCCGCGCGTGTCGCTTTGTACGTGTGATTGTGTCATGGTCCCATGCGCTAAGACC-----------------------------CTTCCAGGCTTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTCGAGCCCGGCACCATGGACGCCGTCC--------GTGCCGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Ophiostoma_protearum_DQ316163 CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TAGTATTCTCAGCTTTCTTACTGT-ACAGCAGTTTGGACGGC--------------------------------------TTCCTAACAGTTATTTTTTAGGCCTCTGGCAACAAGTACGTTCCCCGTGCCGTCCTTGTCGATCTGGAGCCCGGTACCATGGACGCCGTCC--------GCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCTGACAACTTCGTCTTCGG Ophiostoma_protearum_DQ316165 CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TAGTATTCTCAGCTTTCTTACTGT-ACAGCAGTTTGGACGGC--------------------------------------TTCCTAACAGTTATTTTTTAGGCCTCTGGCAACAAGTACGTTCCCCGTGCCGTCCTTGTCGATCTGGAGCCCGGTACCATGGACGCCGTCC--------GCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCTGACAACTTCGTCTTCGG Ophiostoma_splendens_DQ296071 CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TAGTCTTCTCGGCTTTCTTACTGT-ACAGCCGTTTGGACAGC--------------------------------------GTCCTAACA----ATGTCTAGGCCTCTGGCAACAAGTACGTCCCCCG-GCCGTCCTTGTCGATCTGGAGCCCGGTACCATGGACGCCGTCC--------GCGCGGGTCCTTTCGGCCAGCTGTTCCGCCCTGACAACTTCGTCTTCGG Ophiostoma_splendens_DQ316166 CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TAGTATTCTCAGCTTTCTTACTGT-ACAGCCGTTTGGACAGC--------------------------------------TTCCTAACA----ATGTCTAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTGGAGCCCGGTACCATGGACGCCGTCC--------GCGCGGGTCCTTTCGGCCAGCTGTTCCGCCCTGACAACTTCGTCTTCGG Ophiostoma_stenoceras_AY280471_T CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-CAGTACTAACGCCTCCATGACTATATTATATTCTAGGAGAGT--------------------------------------GACACTAAC----AACTGTAGGCCTCCGGTAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTGGAGCCCGGCACCATGGACGCCGTCC--------GTGCTGGTCCTTTCG?????????????????????????????????? Ophiostoma_stenoceras_AY280473 CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-CAGTACTAACGCCTCCATGACTATATTATATTCTAGGAGAGT--------------------------------------GACACTAAC----AACTGTAGGCCTCCGGTAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTGGAGCCCGGCACCATGGACGCCGTCC--------GTGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAATTTCGTCTTCGG Sporothrix_albicans_CBS302.73_T CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCCATGAGGTTTCGTTTTTC----------------TTGTCACAATCGCTGGC-TTTGATGCCGTGCTATG-----TATCACAAAA-----TCTAACGCC----CTTTATAGGCCTCTGGCAACAAGTACGTCCCCCGT???????????????????????????????????????????--------????????????????????????????????????????????????? Sporothrix_humicola_CMW7617 CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TCGTATTTCTCTCCATGCTAATGTTTTTTAATAGTTGGTGGC--ATTATGCCGTGCCACG-----TACCACATAA-----TCTAACATT-----TTGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTCGAGCCCGGCACCATGGACGCCGTCC--------GCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Sporothrix_humicola_CMW7618_T CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TCGTATTTCTCTCCATGCTAATGTTTTTTAATAGTTGGTGGC--ATTATGCCGTGCCACG-----TACCACATAA-----TCTAACATT-----TTGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTCGAGCCCGGCACCATGGACGCCGTCC--------GCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Sporothrix_inflata_AY495437_T CTACAACGGCACCTCCGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TTGT--------------------------CCAGCTACCGGC-TTTGGCGTCGTGTTACGGC-ATGGACAACCAA-----CTAACCATT----TTCGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTCGAGCCCGGCACCATGGACGCCGTCC--------GCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Sporothrix_inflata_AY495442 CTACAACGGCACCTCCGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TTGT--------------------------CCAGCTACCGGC-TTTGGCGTCGTGTTACGGC-ATGGACAACCAA-----CTAACCATT----TTCGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTCGAGCCCGGCACCATGGACGCCGTCC--------GCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Sporothrix_lignivora_CMW18597 GTACAATGGCACGTCTGAGCTCCAGCTCGAGCGCATGAGCGTCTACTTCAACGAGGTTTGTAGACTCGGCCTTTTCTACTAAATTTTTTCTGTCATTATTTAGAAATATTGAACGGTTCGGGCTGACAAATATAT-----------------GCAATAGGCCTCTGGCAACAAGTACGTTCCCCGTGCTGTTCTGGTTGATCTGGAGCCCGGCACCATGGATGCCGTCC--------GTGCTGGTCCTTTTGGTCAGCTTTTCCGTCCCGACAACTTCGTCTTCGG Sporothrix_lignivora_CMW18598 GTACAATGGCACGTCTGAGCTCCAGCTCGAGCGCATGAGCGTCTACTTCAACGAGGTTTGTAGACTCGGCCTTTTCTACTAAATTTTTTCTGTCATTATTTAGAAATATTGAACGGTTCGGGCTGACAAATATAT-----------------GCAATAGGCCTCTGGCAACAAGTACGTTCCCCGTGCTGTTCTGGTTGATCTGGAGCCCGGCACCATGGATGCCGTCC--------GTGCTGGTCCTTTTGGTCAGCTTTTCCGTCCCGACAACTTCGTCTTCGG Sporothrix_lignivora_CMW18599 GTACAATGGCACGTCTGAGCTCCAGCTCGAGCGCATGAGCGTCTACTTCAACGAGGTTTGTATACTCCATCTTTTCTATTATATTTTTTCTGTCATTGTTTAGAAATATTGAATGGTCCGGGCTGACAAATATAC-----------------GCAATAGGCCTCTGGCAACAAGTACGTTCCCCGTGCTGTTCTGGTTGATCTGGAGCCCGGCACCATGGATGCCGTCC--------GTGCTGGTCCTTTTGGTCAGCTTTTCCGTCCCGACAACTTCGTCTTCGG Sporothrix_lignivora_CMW18600_T GTACAATGGCACGTCTGAGCTCCAGCTCGAGCGCATGAGCGTCTACTTCAACGAGGTTTGTATACTCCATCTTTTCTATTATATTTTTTCTGTCATTGTTTAGAAATATTGAATGGTCCGGGCTGACAAATATAC-----------------GCAATAGGCCTCTGGCAACAAGTACGTTCCCCGTGCTGTTCTGGTTGATCTGGAGCCCGGCACCATGGATGCCGTCC--------GTGCTGGTCCTTTTGGTCAGCTTTTCCGTCCCGACAACTTCGTCTTCGG Sporothrix_lignivora_CMW18601 GTACAATGGCACGTCTGAGCTCCAGCTCGAGCGCATGAGCGTCTACTTCAACGAGGTTTGTATACTCCATCTTTTCTATTATATTTTTTCTGTCATTGTTTAGAAATATTGAATGGTCCGGGCTGACAAATATAC-----------------GCAATAGGCCTCTGGCAACAAGTACGTTCCCCGTGCTGTTCTGGTTGATCTGGAGCCCGGCACCATGGATGCCGTCC--------GTGCTGGTCCTTTTGGTCAGCTTTTCCGTCCCGACAACTTCGTCTTCGG Sporothrix_mexicanus_AM498344_T CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TCGTGTTTCTCTCTAGTCTGAT-TTTTCTATCAGTTGTCGGC--TTGACGCCGTGCCACG-----TACCACAGGT-----TCTAACATT-----TTGATAGGCCTCCGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTCGAGCCCGGCACCATGGACGCCGTCCGCGCTGGTGCGCTGGTCCCTTCGGTCAGCTGTTCCGCCCCGACAATTCTTCGTTCTT Sporothrix_nivea_CBS150.87_T CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAATGAGGT-TCGTTTTTC----------------TTGTCACAATCGCTGGC-TTTGATGCCGTGCTATG-----TATCACAAAT-----TCTAACGCC----TTTTATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTTCTTGTCGATCTCGAGCCCGGCACCATGGATGCCGTCC--------GCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTC???????? Sporothrix_pallida_CBS131.56_T CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TCGTTTTTC----------------TTGTCACAATCGCTGGC-TTTGATGCCGTGCTATG-----TATCACAAAT-----TCTAACGCC----TTTTATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTTCTTGTCGATCTCGAGCCCGGCACCATGGATGCCGTCC--------GCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Sporothrix_pallida_CBS182.63 CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TCGTTTTTC----------------TTGTCACAATCGCTGGC-TTTGATGCCGTGCTATG-----TATCACAAAT-----TCTAACGCC----TTTTATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTTCTTGTCGATCTCGAGCCCGGCACCATGGATGCCGTCC--------GCGCTGGTCCT?TCGGCCAGCTGTTCCGCCCCGACAACT-CGTCTTCGG Sporothrix_schenckii_AM116910 CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TTGTTTTTTGGT------------------TTCCCGACCGGC-TTCAGTGTCACGTCCCACCGTTTGGCACTAGTTTAACCTAACTA-T----TTTGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTGGTCGATCTCGAGCCCGGTACCATGGATGCCGTCC--------GTGCCGGTCCTTTCGGTCAGCTGTTCCGTCCCGACAACTTCGTCTTCGG Sporothrix_schenckii_AM116911_T CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TTGTTTTTTGGT------------------TTCCCGACCGGC-TTCAGTGTCACGTCCCACCGTTTGGCACTAGTTTAACCTAACTA-T----TTTGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTGGTCGATCTCGAGCCCGGTACCATGGATGCCGTCC--------GTGCCGGTCCTTTCGGTCAGCTGTTCCGTCCCGACAACTTCGTCTTCGG Sporothrix_schenckii_AM116916_Bolivia CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TTG-TTTTTGGT------------------TTCCCGACCGAC-TTTGGTGTCACGTCCCACCGTTTGGCACCAGTCTAACCTAACCA-T----TTTGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTCGTCGATCTCGAGCCTGGTACCATGGATGCCGTCC--------GTGCCGGTCCTTTCGGTCAGCTGTTCCGTCCGGACAACTTCGTCTTCGG Sporothrix_schenckii_AM116921_Colombia CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TTG-TTTTTGGT------------------TTCCCGACCGAC-TTTGGTGTCACGTCCCACCGTTTGGCACCAGTCTAACCTAACCA-T----TTTGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTCGTCGATCTCGAGCCTGGTACCATGGATGCCGTCC--------GTGCCGGTCCTTTCGGTCAGCTGTTCCGTCCGGACAACTTCGTCTTCGG Sporothrix_schenckii_AM116922_Argentina CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TTG-TTTTTGGT------------------TTCCCGACCGAC-TTTGGTGTCACGTCCCACCGTTTGGCACCAGTCTAACCTAACCA-T----TTTGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTCGTCGATCTCGAGCCTGGTACCATGGATGCCGTCC--------GTGCCGGTCCTTTCGGTCAGCTGTTCCGTCCGGACAACTTCGTCTTCGG Sporothrix_schenckii_AM116923_Peru CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TTG-TTTTTGGT------------------TTCCCGACCGAC-TTTGGTGTCACGTCCCACCGTTTGGCACCAGTCTAACCTAACCA-T----TTTGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTCGTCGATCTCGAGCCTGGTACCATGGATGCCGTCC--------GTGCCGGTCCTTTCGGTCAGCTGTTCCGTCCGGACAACTTCGTCTTCGG Sporothrix_schenckii_AM116925_SA CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TTGTTTTTTGGT------------------TTCCCGACCGGC-TTCGGTGTCACGTCCCACCGTTTGGCACTAGTCTAACCTAACCA-T----TTTGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGCCGTCC--------GTGCTGGTCCTTTCGGTCAGCTGTTCCGTCCCGACAACTTCGTCTTCGG Sporothrix_schenckii_AM116926_Peru CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TTG-TTTTTGGT------------------TTCCCAACCGAC-TTTGGTGTCACGTCCCACCGTTTGGCACTAGTCTAACCTAACCA-T----TTTGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTGGTCGATCTCGAGCCCGGTACCATGGATGCCGTCC--------GTGCCGGTCCTTTCGGTCAGCTGTTCCGTCCCGACAACTTCGTCTTCGG Sporothrix_schenckii_AM116928_Peru CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TTG-TTTTTGGT------------------TTCCCAACCGAC-TTTGGTGTCACGTCCCACCGTTTGGCACTAGTCTAACCTAACCA-T----TTTGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTGGTCGATCTCGAGCCCGGTACCATGGATGCCGTCC--------GTGCCGGTCCTTTCGGTCAGCTGTTCCGTCCCGACAACTTCGTCTTCGG Sporothrix_schenckii_AM116946_Brazil_T CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TTG-TTTTTGGT------------------TTCCCGATCGGC-TTTGC---------------TTTGGCCCTAGT-----CTAACCA-T----TTTGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTGGTCGATCTCGAGCCCGGTACCATGGATGCCGTCC--------GTGCCGGTCCTTTCGGTCAGCTGTTCCGTCCCGACAACTTCGTCTTCGG Sporothrix_schenckii_AM116952_Brazil CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TTG-TTTTTGGT------------------TTCCCGATCGGC-TTTTGC--------------TTTGGCCCTAGT-----CTAACCA-T----TTTGATAGGCCTCTGGTAACAAGTACGTCCCCCGTGCCGTCCTGGTCGATCTCGAGCCCGGTACCATGGATGCCGTCC--------GTGCCGGTCCTTTCGGTCAGCTGTTCCGTCCCGACAACTTCGTCTTCGG Sporothrix_schenckii_AM116954_Brazil CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TTG-TTTTTGGT------------------TTCCCGATCGGC-TTTGC---------------TTTGGCCCTAGT-----CTAACCA-T----TTTGATAGGCCTCTGGTAACAAGTACGTCCCCCGTGCCGTCCTGGTCGATCTCGAGCCCGGTACCATGGATGCCGTCC--------GTGCCGGTCCTTTCGGTCAGCTGTTCCGTCCCGACAACTTCGTCTTCGG Sporothrix_schenckii_AM116964_Spain CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TTGTTTTTTGGT------------------TTACCTACCGGC-TTTGGTGTCACGTCACAGT-TTTGGCACGATT-----CTAACAATT----TTTGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTGGTCGATCTCGAGCCCGGTACCATGGATGCCGTCC--------GTGCCGGTCCTTTCGGCCAGCTGTTCCGTCCCGACAACTTCGTTTTCGG Sporothrix_schenckii_AM116966_Spain_T CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TTGTTTTTTGGT------------------TTACCTACCGGC-TTTGGTGTCACGTCACAGT-TTTGGCACGATT-----CTAACAATT----TTTGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTGGTCGATCTCGAGCCCGGTACCATGGATGCCGTCC--------GTGCCGGTCCTTTCGGCCAGCTGTTCCGTCCCGACAACTTCGTTTTCGG Sporothrix_schenckii_AM261687_Brazil CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TTG-TTTTTGGT------------------TTCCCGATCGGC-TTTGC---------------TTTGGCCCTAGT-----CTAACCA-T----TTTGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTGGTCGATCTCGAGCCCGGTACCATGGATGCCGTCC--------GTGCCGGTCCTTTCGGTCAGCTGTTCCGTCCCGACAACTTCGTCTTCGG Sporothrix_schenckii_AY280477_SA CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TTGTTTTTTGGT------------------TTCCCGACCGGC-TTCGGTGTCACGTCCCACCGTTTGGCACTAGTCTAACCTAACCA-T----TTTGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGCCGTCC--------GTGCTGGTCCTTTCGGACAGCTGTTCCGTCCCGACAACTTCGTCTTCGG Sporothrix_schenckii_var._luriei_CBS937.72_T CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TTGTTTTTTGT-------------------TTACCCACCAGC-TTTGCTGTCACGTCACACCGTTTGACTCCATGTT---CTAACAATA----TCGGAAAGGCCTCTGGCAACAAGTACGTTCCCCGTGCCGTCCTGGTCGATCTCGAGCCCGGTACCATGGATGCCGTCC--------GTGCTGGTCCTTTCGGTCAGCTGTTCCGTCCCGACAACTTCGTTTTCGG Sporothrix_stylites_CMW14541 CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TCGTATTTATCTCCATGCTAGTGTTTTTTAATAGTCGTTGGC--ATTATGCCGTGCCATG-----TACCACAAAT-----TCTAACATT-----TTGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTCGAGCCCGGCACCATGGACGCCGTCC--------GCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Sporothrix_stylites_CMW14542 CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TCGTATTTATCTCCATGCTAGTGTTTTTTAATAGTCGTTGGC--ATTATGCCGTGCCATG-----TACCACAAAT-----TCTAACATT-----TTGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTCGAGCCCGGCACCATGGACGCCGTCC--------GCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Sporothrix_stylites_CMW14543_T CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TCGTATTTATCTCCATGCTAGTGTTTTTTAATAGTCGTTGGC--ATTATGCCGTGCCATG-----TACCACAAAT-----TCTAACATT-----TTGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTCGAGCCCGGCACCATGGACGCCGTCC--------GCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG Sporothrix_stylites_CMW14544 CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TCGTATTTATCTCCATGCTAGTGTTTTTTAATAGTCGTTGGC--ATTATGCCGTGCCATG-----TACCACAAAT-----TCTAACATT-----TTGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTCGAGCCCGGCACCATGGACGCCGTCC--------GCGCTGGTCC??????????????????????????????????????? Sporothrix_stylites_CMW7133 CTACAACGGCACCTCGGACCTCCAGCTGGAGCGTCTGAGCGTCTACTTCAACGAGGT-TCGTATTTATCTCCATGCTAGTGTTTTTTAATAGTCGTTGGC--ATTATGCCGTGCCATG-----TACCACAAAT-----TCTAACATT-----TTGATAGGCCTCTGGCAACAAGTACGTCCCCCGTGCCGTCCTTGTCGATCTCGAGCCCGGCACCATGGACGCCGTCC--------GCGCTGGTCCTTTCGGCCAGCTGTTCCGCCCCGACAACTTCGTCTTCGG ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = Beta_tubulin) = N: 1-286; CODONPOSSET CodonPositions (CHARACTERS = Beta_tubulin) = N: 1-286; END;