Matrix 33913 of Study 18401
Matrices
Title: Caprifoliaceae CYC Alignment
Rows
Taxon Label | Row Segments | Characters 1?–30 |
---|---|---|
Diervilla sessilifolia 1 | (none) | AAAGATCGGCACAGCAAGATCAACACCGCA |
Weigela hortensis 1 | (none) | AAAGACCG{CG}CACAGCAAGATCAACACC |
Heptacodium miconioides 1 | (none) | AAAGA{CT}CGGCACAGCAAGATCAACACC |
Leycesteria formosa 1a | (none) | AAAGACCGGCACAGCAAGATCAACACCGCC |
Leycesteria sp 1b | (none) | AAAGACCGGCACAGCAAGATCAACACCGCC |
Triosteum himalayanum 1 | (none) | AAAGACCGCCACAGCAAGATCAACACCGCC |
Lonicera heteroloba 1 | (none) | AAAGATCGGCACAGCAAGATCAACACCGCC |
Symphoricarpos occidentalis 1 | (none) | AAAGACCGCCACAGCAAGATCAACACCGCC |
Symphoricarpos orbiculatus 1 | (none) | AAAGACCGACACAGCAAGATCAACACCGCC |
Kolkwitzia amabilis 1 | (none) | AAAGACCGGCACAGCAAAATCAACACGGCC |
Abelia x grandiflora 1 | (none) | AAAGACCGCCACAGCAAGATCAATACGGCC |
Dipelta floribunda 1 | (none) | AAAGACCGGCACAGCAAGATCAACACGGCC |
Linnaea borealis 1 | (none) | AAAGACCGCCACAGCAAGATCAACACGGCC |
Dipsacus pilosus 1 | (none) | AAAGACCGGCACAGCAAGATCAACACAGCC |
Dipsacus inermis 1 | (none) | ------------------------------ |
Scabiosa columbaria 1 | (none) | AAAGACCGGCACAGCAAGATCAACACAGCC |
Scabiosa angustiloba 1Ba | (none) | ------------------------------ |
Scabiosa angustiloba 1Bb | (none) | ------------------------------ |
Sixalix atropurpurea 1Bc | (none) | ------------------------------ |
Sixalix atropurpurea 1Bd | (none) | ------------------------------ |
Sixalix atropurpurea 1Bb | (none) | ------------------------------ |
Sixalix atropurpurea 1Ba | (none) | ------------------------------ |
Cephalaria hirsuta 1 | (none) | ------------------------------ |
Cephalaria hirsuta 1B | (none) | ------------------------------ |
Cephalaria humilis 1B | (none) | ------------------------------ |
Knautia calycina 1 | (none) | ------------------------------ |
Knautia macedonica 1 | (none) | ------------------------------ |
Pterocephalus strictus 1Bb | (none) | ------------------------------ |
Pterocephalus strictus 1Ba | (none) | ------------------------------ |
Lomelosia crenata 1B | (none) | ------------------------------ |
Pycnocomon rutifolium 1B | (none) | ------------------------------ |
Bassecoia bretschneideri 1 | (none) | ------------------------------ |
Triplostegia glandulifera 1 | (none) | AAAGATCGGCACAGCAAGATCAACACGGCC |
Patrinia triloba 1 | (none) | AAAGATCGGCACAGCAAGATCAACACTGCA |
Valerianella dentata 1 | (none) | ------------------------------ |
Fedia cornucopiae 1 | (none) | ------------------------------ |
Diervilla sessilifolia 2A | (none) | AAAGATCGCCACAGCAAAATATACACGGCC |
Weigela hortensis 2A | (none) | AAAGATCGGCACAGCAAAATATACACGGCC |
Leycesteria formosa 2A | (none) | AAAGATCGGCACAGCAAAATTTACACGGCC |
Lonicera reticulata 2A | (none) | AAAGACCGGCACAGCAAAATTTACACGGCC |
Lonicera heteroloba 2A | (none) | AAAGACCGGCACAGCAAAATTTATACGGCC |
Symphoricarpos orbiculatus 2A | (none) | AAAGA{CT}CGGCACAGCAAAATTTACACT |
Triosteum himalayanum 2A | (none) | AAAGACCGACACAGCAAAATTTACACGGCC |
Cryptothladia kokonorica 2A | (none) | ------------------------------ |
Patrinia triloba 2A | (none) | ------------------------------ |
Sixalix atropurpurea 2A | (none) | ------------------------------ |
Scabiosa angustiloba 2A | (none) | ------------------------------ |
Pterocephalus strictus 2A | (none) | ------------------------------ |
Kolkwitzia amabilis 2A | (none) | ------------------------------ |
Dipelta floribunda 2A | (none) | ------------------------------ |
Centranthus ruber 2A | (none) | ------------------------------ |
Fedia cornucopiae 2A | (none) | ------------------------------ |
Bassecoia bretschneideri 2A | (none) | ------------------------------ |
Knautia macedonica 2A | (none) | ------------------------------ |
Knautia calycina 2A | (none) | ------------------------------ |
Lomelosia crenata 2A | (none) | ------------------------------ |
Pycnocomon rutifolium 2A | (none) | ------------------------------ |
Cephalaria hirsuta 2A | (none) | ------------------------------ |
Cephalaria humilis 2A | (none) | ------------------------------ |
Dipsacus inermis 2A | (none) | ------------------------------ |
Diervilla sessilifolia 2B | (none) | AAAGATCGCCACAGCAAAATATACACGGCA |
Weigela hortensis 2B | (none) | AAAGATCGGCACAGCAAAATATTCACGGCA |
Heptacodium miconioides 2B | (none) | ------------------------------ |
Kolkwitzia amabilis 2B | (none) | ------------------------------ |
Dipelta floribunda 2B | (none) | ------------------------------ |
Lonicera heteroloba 2B | (none) | ------------------------------ |
Triosteum himalayanum 2B | (none) | AAAGATCGGCACAGCAAAATATATACCGCA |
Cryptothladia chinensis 2Ba | (none) | ------------------------------ |
Cryptothladia kokonorica 2Ba | (none) | ------------------------------ |
Cryptothladia chinensis 2Bb | (none) | ------------------------------ |
Cryptothladia kokonorica 2Bb | (none) | ------------------------------ |
Morina longifolia 2Bb | (none) | ------------------------------ |
Morina longifolia 2Ba | (none) | ------------------------------ |
Patrinia triloba 2B | (none) | ------------------------------ |
Centranthus ruber 2Ba | (none) | ------------------------------ |
Centranthus ruber 2Bb | (none) | ------------------------------ |
Valerianella dentata 2B | (none) | ------------------------------ |
Fedia cornucopiae 2Ba | (none) | ------------------ATATACACAGCG |
Fedia cornucopiae 2Bb | (none) | ------------------------------ |
Triplostegia glandulifera 2B | (none) | ------------------------------ |
Scabiosa angustiloba 2Ba | (none) | ------------------------------ |
Scabiosa angustiloba 2Bb | (none) | ------------------------------ |
Sixalix atropurpurea 2Ba 1 | (none) | ------------------------------ |
Sixalix atropurpurea 2Ba 3 | (none) | ------------------------------ |
Sixalix atropurpurea 2Ba 2 | (none) | ------------------------------ |
Sixalix atropurpurea 2Ba 4 | (none) | ------------------------------ |
Sixalix atropurpurea 2Bb | (none) | ------------------------------ |
Sixalix farinosa 2Ba | (none) | ------------------------------ |
Sixalix farinosa 2Bb | (none) | ------------------------------ |
Pterocephalus strictus 2Ba 1 | (none) | ------------------------------ |
Pterocephalus strictus 2Ba 2 | (none) | ------------------------------ |
Pterocephalus strictus 2Ba 3 | (none) | ------------------------------ |
Pterocephalus strictus 2Bb 1 | (none) | ------------------------------ |
Pterocephalus strictus 2Bb 2 | (none) | ------------------------------ |
Lomelosia crenata 2Ba 1 | (none) | ------------------------------ |
Lomelosia crenata 2Ba 2 | (none) | ------------------------------ |
Lomelosia crenata 2Bb | (none) | ------------------------------ |
Pycnocomon rutifolium 2Ba | (none) | ------------------------------ |
Pycnocomon rutifolium 2Bb 2 | (none) | ------------------------------ |
Pycnocomon rutifolium 2Bb 1 | (none) | ------------------------------ |
Cephalaria hirsuta 2Ba 1 | (none) | ------------------------------ |
Cephalaria hirsuta 2Ba 2 | (none) | ------------------------------ |
Cephalaria humilis 2Ba 1 | (none) | ------------------------------ |
Cephalaria humilis 2Ba 2 | (none) | ------------------------------ |
Cephalaria hirsuta 2Bb | (none) | ------------------------------ |
Cephalaria humilis 2Bb | (none) | ------------------------------ |
Knautia calycina 2Ba 1 | (none) | ------------------------------ |
Knautia calycina 2Ba 2 | (none) | ------------------------------ |
Knautia calycina 2Ba 3 | (none) | ------------------------------ |
Knautia calycina 2Bb 1 | (none) | ------------------------------ |
Knautia calycina 2Bb 2 | (none) | ------------------------------ |
Knautia macedonica 2Ba | (none) | ------------------------------ |
Knautia macedonica 2Bb | (none) | ------------------------------ |
Dipsacus pilosus 2Ba | (none) | ------------------------------ |
Dipsacus pilosus 2Bb | (none) | ------------------------------ |
Dipsacus inermis 2Ba | (none) | ------------------------------ |
Pseudoscabiosa limonifolia 2Ba | (none) | ------------------------------ |
Pseudoscabiosa limonifolia 2Bb | (none) | ------------------------------ |
Bassecoia bretschneideri 2Ba | (none) | ------------------------------ |
Bassecoia bretschneideri 2Bb | (none) | ------------------------------ |
Diervilla sessilifolia 3A | (none) | AAAGATCGGCACAGCAAAATCTACACCGCG |
Weigela hortensis 3A | (none) | AAAGATCGGCACAGCAAAATCTACACCGCG |
Triosteum himalayanum 3A | (none) | AAAGA{CT}CG{AC}CACAGCAAAATCTAC |
Lonicera reticulata 3A | (none) | AAAGATCGGCACAGCAAAATCTACACAGCA |
Lonicera heteroloba 3Aa | (none) | ------------------------------ |
Lonicera heteroloba 3Ab | (none) | ------------------------------ |
Symphoricarpos occidentalis 3A | (none) | AAAGATCGGCACAGCAAAATCTACACGGCA |
Heptacodium miconioides 3A | (none) | AAAGATCGCCACAGCAAAATATACACAGCG |
Kolkwitzia amabilis 3A | (none) | AAAGATCGCCACAGCAAAATATACACCGCA |
Abelia x grandiflora 3Aa | (none) | AAAGATCGCCACAGCAAAATATACACCGCA |
Abelia x grandiflora 3Ab | (none) | AAAGATCGCCACAGCAAAATATACACCGCA |
Dipelta floribunda 3A | (none) | AAAGATCGCCACAGCAAAATA{CT}ACACC |
Linnaea borealis 3A | (none) | AAAGATCGCCACAGCAAAATA{CT}ACACC |
Fedia cornucopiae 3A | (none) | ------------------------------ |
Centranthus ruber 3A | (none) | AAAGATCGGCACAGCAAGATATACACTGCA |
Cryptothladia chinensis 3A | (none) | AAAGATCGGCACAGCAAAATCTACACCGCA |
Knautia macedonica 3A | (none) | ------------------------------ |
Scabiosa angustiloba 3A | (none) | ------------------------------ |
Sixalix atropurpurea 3A | (none) | ------------------------------ |
Pycnocomon rutifolium 3A | (none) | ------------------------------ |
Pterocephalus strictus 3A | (none) | ------------------------------ |
Cryptothladia kokonorica 3Ba | (none) | ------------------------ACAGCT |
Cryptothladia kokonorica 3Bb | (none) | ------------------------------ |
Cryptothladia chinensis 3Ba | (none) | AAAGACCGACACAGCAAGATCTGTACAGCT |
Cryptothladia chinensis 3Bb | (none) | AAAGACCGCCACAGCAAAATCTAC--AGCT |
Morina longifolia 3Ba | (none) | AAAGA{CT}CGCCACAGCAA{AG}ATCTCT |
Morina longifolia 3Bb | (none) | AAAGA{CT}CG{CG}CACAGCAA{AG}ATC |
Lonicera reticulata 3B | (none) | AAAGACCGGCACAGCAAAATATTTACTTCT |
Symphoricarpos occidentalis 3B | (none) | AAAGATCGGCACAGCAAAATATTTACTTCT |
Heptacodium miconioides 3B | (none) | AAAGACCGGCACAGCAAGATATTTACGGCT |
Kolkwitzia amabilis 3B | (none) | AAAGACCGCCACAGCAAGATCTATACAGCT |
Dipelta floribunda 3B | (none) | ------------------------------ |
Triplostegia glandulifera 3B | (none) | ------------------------------ |
Patrinia triloba 3B | (none) | ------------------------------ |
Dipsacus pilosus 3B | (none) | ------------------------------ |
Pterocephalus strictus 3B | (none) | ------------------------------ |
Knautia calycina 3Ba | (none) | ------------------------------ |
Knautia calycina 3Bb | (none) | ------------------------------ |
Knautia macedonica 3Bb | (none) | ------------------------------ |
Sixalix atropurpurea 3B | (none) | ------------------------------ |
Pseudoscabiosa limonifolia 3B | (none) | ------------------------------ |
Bassecoia bretschneideri 3B | (none) | ------------------------------ |
Centranthus ruber 3B | (none) | ------------------------------ |
Valerianella dentata 3B | (none) | ------------------------------ |
Fedia cornucopiae 3B | (none) | ------------------ATATGGACAGCT |
Columns
None of the columns has a description.