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Matrix 33913 of Study 18401

About Citation title: "Elaboration of bilateral symmetry across Knautia macedonica capitula related to changes in ventral petal expression of CYCLOIDEA-like genes".
About Study name: "Elaboration of bilateral symmetry across Knautia macedonica capitula related to changes in ventral petal expression of CYCLOIDEA-like genes".
About This study is part of submission 18401 (Status: Published).

Matrices

Title: Caprifoliaceae CYC Alignment

Rows

Taxon Label Row Segments Characters 1?–30
Diervilla sessilifolia 1  (none) AAAGATCGGCACAGCAAGATCAACACCGCA
Weigela hortensis 1  (none) AAAGACCG{CG}CACAGCAAGATCAACACC
Heptacodium miconioides 1  (none) AAAGA{CT}CGGCACAGCAAGATCAACACC
Leycesteria formosa 1a  (none) AAAGACCGGCACAGCAAGATCAACACCGCC
Leycesteria sp 1b  (none) AAAGACCGGCACAGCAAGATCAACACCGCC
Triosteum himalayanum 1  (none) AAAGACCGCCACAGCAAGATCAACACCGCC
Lonicera heteroloba 1  (none) AAAGATCGGCACAGCAAGATCAACACCGCC
Symphoricarpos occidentalis 1  (none) AAAGACCGCCACAGCAAGATCAACACCGCC
Symphoricarpos orbiculatus 1  (none) AAAGACCGACACAGCAAGATCAACACCGCC
Kolkwitzia amabilis 1  (none) AAAGACCGGCACAGCAAAATCAACACGGCC
Abelia x grandiflora 1  (none) AAAGACCGCCACAGCAAGATCAATACGGCC
Dipelta floribunda 1  (none) AAAGACCGGCACAGCAAGATCAACACGGCC
Linnaea borealis 1  (none) AAAGACCGCCACAGCAAGATCAACACGGCC
Dipsacus pilosus 1  (none) AAAGACCGGCACAGCAAGATCAACACAGCC
Dipsacus inermis 1  (none) ------------------------------
Scabiosa columbaria 1  (none) AAAGACCGGCACAGCAAGATCAACACAGCC
Scabiosa angustiloba 1Ba  (none) ------------------------------
Scabiosa angustiloba 1Bb  (none) ------------------------------
Sixalix atropurpurea 1Bc  (none) ------------------------------
Sixalix atropurpurea 1Bd  (none) ------------------------------
Sixalix atropurpurea 1Bb  (none) ------------------------------
Sixalix atropurpurea 1Ba  (none) ------------------------------
Cephalaria hirsuta 1  (none) ------------------------------
Cephalaria hirsuta 1B  (none) ------------------------------
Cephalaria humilis 1B  (none) ------------------------------
Knautia calycina 1  (none) ------------------------------
Knautia macedonica 1  (none) ------------------------------
Pterocephalus strictus 1Bb  (none) ------------------------------
Pterocephalus strictus 1Ba  (none) ------------------------------
Lomelosia crenata 1B  (none) ------------------------------
Pycnocomon rutifolium 1B  (none) ------------------------------
Bassecoia bretschneideri 1  (none) ------------------------------
Triplostegia glandulifera 1  (none) AAAGATCGGCACAGCAAGATCAACACGGCC
Patrinia triloba 1  (none) AAAGATCGGCACAGCAAGATCAACACTGCA
Valerianella dentata 1  (none) ------------------------------
Fedia cornucopiae 1  (none) ------------------------------
Diervilla sessilifolia 2A  (none) AAAGATCGCCACAGCAAAATATACACGGCC
Weigela hortensis 2A  (none) AAAGATCGGCACAGCAAAATATACACGGCC
Leycesteria formosa 2A  (none) AAAGATCGGCACAGCAAAATTTACACGGCC
Lonicera reticulata 2A  (none) AAAGACCGGCACAGCAAAATTTACACGGCC
Lonicera heteroloba 2A  (none) AAAGACCGGCACAGCAAAATTTATACGGCC
Symphoricarpos orbiculatus 2A  (none) AAAGA{CT}CGGCACAGCAAAATTTACACT
Triosteum himalayanum 2A  (none) AAAGACCGACACAGCAAAATTTACACGGCC
Cryptothladia kokonorica 2A  (none) ------------------------------
Patrinia triloba 2A  (none) ------------------------------
Sixalix atropurpurea 2A  (none) ------------------------------
Scabiosa angustiloba 2A  (none) ------------------------------
Pterocephalus strictus 2A  (none) ------------------------------
Kolkwitzia amabilis 2A  (none) ------------------------------
Dipelta floribunda 2A  (none) ------------------------------
Centranthus ruber 2A  (none) ------------------------------
Fedia cornucopiae 2A  (none) ------------------------------
Bassecoia bretschneideri 2A  (none) ------------------------------
Knautia macedonica 2A  (none) ------------------------------
Knautia calycina 2A  (none) ------------------------------
Lomelosia crenata 2A  (none) ------------------------------
Pycnocomon rutifolium 2A  (none) ------------------------------
Cephalaria hirsuta 2A  (none) ------------------------------
Cephalaria humilis 2A  (none) ------------------------------
Dipsacus inermis 2A  (none) ------------------------------
Diervilla sessilifolia 2B  (none) AAAGATCGCCACAGCAAAATATACACGGCA
Weigela hortensis 2B  (none) AAAGATCGGCACAGCAAAATATTCACGGCA
Heptacodium miconioides 2B  (none) ------------------------------
Kolkwitzia amabilis 2B  (none) ------------------------------
Dipelta floribunda 2B  (none) ------------------------------
Lonicera heteroloba 2B  (none) ------------------------------
Triosteum himalayanum 2B  (none) AAAGATCGGCACAGCAAAATATATACCGCA
Cryptothladia chinensis 2Ba  (none) ------------------------------
Cryptothladia kokonorica 2Ba  (none) ------------------------------
Cryptothladia chinensis 2Bb  (none) ------------------------------
Cryptothladia kokonorica 2Bb  (none) ------------------------------
Morina longifolia 2Bb  (none) ------------------------------
Morina longifolia 2Ba  (none) ------------------------------
Patrinia triloba 2B  (none) ------------------------------
Centranthus ruber 2Ba  (none) ------------------------------
Centranthus ruber 2Bb  (none) ------------------------------
Valerianella dentata 2B  (none) ------------------------------
Fedia cornucopiae 2Ba  (none) ------------------ATATACACAGCG
Fedia cornucopiae 2Bb  (none) ------------------------------
Triplostegia glandulifera 2B  (none) ------------------------------
Scabiosa angustiloba 2Ba  (none) ------------------------------
Scabiosa angustiloba 2Bb  (none) ------------------------------
Sixalix atropurpurea 2Ba 1  (none) ------------------------------
Sixalix atropurpurea 2Ba 3  (none) ------------------------------
Sixalix atropurpurea 2Ba 2  (none) ------------------------------
Sixalix atropurpurea 2Ba 4  (none) ------------------------------
Sixalix atropurpurea 2Bb  (none) ------------------------------
Sixalix farinosa 2Ba  (none) ------------------------------
Sixalix farinosa 2Bb  (none) ------------------------------
Pterocephalus strictus 2Ba 1  (none) ------------------------------
Pterocephalus strictus 2Ba 2  (none) ------------------------------
Pterocephalus strictus 2Ba 3  (none) ------------------------------
Pterocephalus strictus 2Bb 1  (none) ------------------------------
Pterocephalus strictus 2Bb 2  (none) ------------------------------
Lomelosia crenata 2Ba 1  (none) ------------------------------
Lomelosia crenata 2Ba 2  (none) ------------------------------
Lomelosia crenata 2Bb  (none) ------------------------------
Pycnocomon rutifolium 2Ba  (none) ------------------------------
Pycnocomon rutifolium 2Bb 2  (none) ------------------------------
Pycnocomon rutifolium 2Bb 1  (none) ------------------------------
Cephalaria hirsuta 2Ba 1  (none) ------------------------------
Cephalaria hirsuta 2Ba 2  (none) ------------------------------
Cephalaria humilis 2Ba 1  (none) ------------------------------
Cephalaria humilis 2Ba 2  (none) ------------------------------
Cephalaria hirsuta 2Bb  (none) ------------------------------
Cephalaria humilis 2Bb  (none) ------------------------------
Knautia calycina 2Ba 1  (none) ------------------------------
Knautia calycina 2Ba 2  (none) ------------------------------
Knautia calycina 2Ba 3  (none) ------------------------------
Knautia calycina 2Bb 1  (none) ------------------------------
Knautia calycina 2Bb 2  (none) ------------------------------
Knautia macedonica 2Ba  (none) ------------------------------
Knautia macedonica 2Bb  (none) ------------------------------
Dipsacus pilosus 2Ba  (none) ------------------------------
Dipsacus pilosus 2Bb  (none) ------------------------------
Dipsacus inermis 2Ba  (none) ------------------------------
Pseudoscabiosa limonifolia 2Ba  (none) ------------------------------
Pseudoscabiosa limonifolia 2Bb  (none) ------------------------------
Bassecoia bretschneideri 2Ba  (none) ------------------------------
Bassecoia bretschneideri 2Bb  (none) ------------------------------
Diervilla sessilifolia 3A  (none) AAAGATCGGCACAGCAAAATCTACACCGCG
Weigela hortensis 3A  (none) AAAGATCGGCACAGCAAAATCTACACCGCG
Triosteum himalayanum 3A  (none) AAAGA{CT}CG{AC}CACAGCAAAATCTAC
Lonicera reticulata 3A  (none) AAAGATCGGCACAGCAAAATCTACACAGCA
Lonicera heteroloba 3Aa  (none) ------------------------------
Lonicera heteroloba 3Ab  (none) ------------------------------
Symphoricarpos occidentalis 3A  (none) AAAGATCGGCACAGCAAAATCTACACGGCA
Heptacodium miconioides 3A  (none) AAAGATCGCCACAGCAAAATATACACAGCG
Kolkwitzia amabilis 3A  (none) AAAGATCGCCACAGCAAAATATACACCGCA
Abelia x grandiflora 3Aa  (none) AAAGATCGCCACAGCAAAATATACACCGCA
Abelia x grandiflora 3Ab  (none) AAAGATCGCCACAGCAAAATATACACCGCA
Dipelta floribunda 3A  (none) AAAGATCGCCACAGCAAAATA{CT}ACACC
Linnaea borealis 3A  (none) AAAGATCGCCACAGCAAAATA{CT}ACACC
Fedia cornucopiae 3A  (none) ------------------------------
Centranthus ruber 3A  (none) AAAGATCGGCACAGCAAGATATACACTGCA
Cryptothladia chinensis 3A  (none) AAAGATCGGCACAGCAAAATCTACACCGCA
Knautia macedonica 3A  (none) ------------------------------
Scabiosa angustiloba 3A  (none) ------------------------------
Sixalix atropurpurea 3A  (none) ------------------------------
Pycnocomon rutifolium 3A  (none) ------------------------------
Pterocephalus strictus 3A  (none) ------------------------------
Cryptothladia kokonorica 3Ba  (none) ------------------------ACAGCT
Cryptothladia kokonorica 3Bb  (none) ------------------------------
Cryptothladia chinensis 3Ba  (none) AAAGACCGACACAGCAAGATCTGTACAGCT
Cryptothladia chinensis 3Bb  (none) AAAGACCGCCACAGCAAAATCTAC--AGCT
Morina longifolia 3Ba  (none) AAAGA{CT}CGCCACAGCAA{AG}ATCTCT
Morina longifolia 3Bb  (none) AAAGA{CT}CG{CG}CACAGCAA{AG}ATC
Lonicera reticulata 3B  (none) AAAGACCGGCACAGCAAAATATTTACTTCT
Symphoricarpos occidentalis 3B  (none) AAAGATCGGCACAGCAAAATATTTACTTCT
Heptacodium miconioides 3B  (none) AAAGACCGGCACAGCAAGATATTTACGGCT
Kolkwitzia amabilis 3B  (none) AAAGACCGCCACAGCAAGATCTATACAGCT
Dipelta floribunda 3B  (none) ------------------------------
Triplostegia glandulifera 3B  (none) ------------------------------
Patrinia triloba 3B  (none) ------------------------------
Dipsacus pilosus 3B  (none) ------------------------------
Pterocephalus strictus 3B  (none) ------------------------------
Knautia calycina 3Ba  (none) ------------------------------
Knautia calycina 3Bb  (none) ------------------------------
Knautia macedonica 3Bb  (none) ------------------------------
Sixalix atropurpurea 3B  (none) ------------------------------
Pseudoscabiosa limonifolia 3B  (none) ------------------------------
Bassecoia bretschneideri 3B  (none) ------------------------------
Centranthus ruber 3B  (none) ------------------------------
Valerianella dentata 3B  (none) ------------------------------
Fedia cornucopiae 3B  (none) ------------------ATATGGACAGCT

Columns

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