Matrix 39917 of Study 20521
Matrices
Title: Olfactory Marker Protein Gene Alignment
Description: Protein coding sequences for olfactory marker protein gene
Rows
Taxon Label | Row Segments | Characters 1?–30 |
---|---|---|
Ellobius lutescens | (none) | ATGGCAGAGGACGAGCCACCGAAG---CAG |
Ellobius talpinus | (none) | ATGGCAGAGGACGGGCCACCAAAG---CAG |
Daubentonia madagascariensis | (none) | ATGGCGGAGGACGGGCCTCAGCAG---CCA |
Fukomys damarensis | (none) | ATGGCAGAGGATGGGCCA---AGG------ |
Heterocephalus glaber | (none) | ATGGCAGAGGATGGGCCA---AAG------ |
Cavia aperea | (none) | ATGGCAGAGGATGGGCCA---AAG------ |
Cavia porcellus | (none) | ATGGCAGAGGATGGGCCA---AAG------ |
Erinaceus europaeus | (none) | ATGGCGGAGGACGGGCCGCAGAAG---CCG |
Procavia capensis | (none) | ATGGCGGAGGATGGGCCACCGAAG---CCT |
Nannospalax galili | (none) | ATGGCAGAGGATGGGCCACAGCAA---CAG |
Chrysochloris asiatica | (none) | ATGGCGGAGGACGGGCCACAGAAG---CCT |
Myodes glareolus | (none) | ATGGCAGAGGACGGGCCACCGAAG---CAG |
Microtus agrestis | (none) | ATGGCAGAGGACGGGCCACCGAAG---CAG |
Microtus ochrogaster | (none) | ATGGCAGAGGACGGGCCACCGAAG---CAG |
Cricetulus griseus | (none) | ATGGCAGAGGACGGGCCACAGAAG---CAG |
Mesocricetus auratus | (none) | ATGGCAGAGGACGGGCCGCAGAAG---CAG |
Apodemus sylvaticus | (none) | ATGGCAGAGGACGGGCCACAGAAG---CAG |
Rattus norvegicus | (none) | ATGGCAGAGGACGGGCCACAGAAG---CAG |
Mus musculus | (none) | ATGGCAGAGGATGGGCCGCAGAAG---CAG |
Mus spretus | (none) | ATGGCAGAGGATGGGCCGCAGAAG---CAG |
Peromyscus maniculatus | (none) | ATGGCAGAGGACGGGCCGCAGAAG---CAG |
Neotoma lepida | (none) | ATGGCTGAGGACGGGCCACAGAAG---CAG |
Orycteropus afer | (none) | ATGGCGGAGGACGGGCCACAGAAG---CCT |
Loxodonta africanus | (none) | ATGGCGGAGGATGAGCCACAGAAG---CCT |
Trichechus manatus | (none) | ATGGCAGAGGACGAGCCACAGAAG---CCT |
Octodon degus | (none) | ATGGCTGAAGATGGGCTG---AAG------ |
Miniopterus natalensis | (none) | ATGGCAGAGGAGGGGGCGAAGCAG---CCG |
Ochotona princeps | (none) | ATGGCGGAGGATGCGCCACAGCGG---CCG |
Jaculus jaculus | (none) | ATGGCGGAGGATGGGCCGCAGCAGCCTCGG |
Manis pentadactyla | (none) | ATGGCAGAGGACGGGCCGAAGCAG---CCA |
Okapia johnstoni | (none) | ATGGCGGAGGACGAGCCGAGGCCT---TCG |
Giraffa tippelskirchi | (none) | ATGGCGGAGGACGAGCCGAGGCCT---TCG |
Ovis aries | (none) | ATGGCGGAGGACGAGCCAAAGCCT---TCG |
Pantholops hodgsonii | (none) | ATGGCGGAGGACGAGCCGAAGCCT---TCG |
Capra aegagrus | (none) | ATGGCGGAGGACGAGCCGAAGCCT---TCG |
Capra hircus | (none) | ATGGCGGAGGACGAGCCGAAGCCT---TCG |
Capreolus capreolus | (none) | ATGGCGGAGGACGAGCCGAAGCCT---TCG |
Bubalus bubalis | (none) | ATGGCGGAGGACGAGCCGAAGCCT---TCG |
Bos mutus | (none) | ATGGCGGAGGACGAGCCGAAGCCT---TCT |
Bos indicus | (none) | ATGGCGGAGGACGAGCCGAAGCCT---TCT |
Bos taurus | (none) | ATGGCGGAGGACGAGCCGAAGCCT---TCT |
Elephantulus edwardii | (none) | ATGGCGGAGGATGGGCCACAGAAA---CCT |
Camelus bactrianus | (none) | ATGGCCGAGGAGGGGCCAAAGCCG---ACG |
Camelus dromedarius | (none) | ATGGCCGAGGAGGGGCCAAAGCCG---ACG |
Camelus ferus | (none) | ATGGCCGAGGAGGGGCCAAAGCCG---ACG |
Vicugna pacos | (none) | ATGGCCGAGGAGGGGCCAAAGCCG---ACG |
Echinops telfairi | (none) | ATGGCGGAGGACGGGCCACAGAAG---GCC |
Equus asinus | (none) | ATGGCAGAGGATGAGCCGAAGCAG---CTG |
Equus caballus | (none) | ATGGCAGAGGACGAGCCGAAGCAG---CTG |
Equus przewalskii | (none) | ATGGCAGAGGACAAGCCGAAGCAG---CTG |
Sus scrofa | (none) | ATGGCAGAGGACGGGTCGAAGCCG---ACA |
Ceratotherium simum | (none) | ATGGCGGAGGACGAGCCGAGGCGG---CCG |
Choeropsis liberiensis | (none) | ATGGCGGAGGACGGGCCCGAGCCG---ACG |
Inia geoffrensis | (none) | GTGGC-GAGGACGAGCCGAAGCCG---ACC |
Lipotes vexillifer | (none) | ATGGCGGAGGACGAGCCGAAGCCG---ACC |
Platanista gangetica | (none) | ATGGCGGAGGACGAGCCGAAGCCG---ACC |
Physeter macrocephalus | (none) | GTGGCGGAGGACGAGCCGAAGCCG---ACC |
Pontoporia blanvillei | (none) | ATGGCGGAGGACGAGCCGAAGCCG---ACC |
Delphinapterus leucas | (none) | ATGGCGGAGGACGAGCCGAAGCCG---ACC |
Phocoenoides dalli | (none) | ATGGCGGAGGACGAGCCGAAGCCG---ACC |
Neophocaena phocaenoides | (none) | ATGGCGGAGGACGAGCCGAAGCCG---ACC |
Phocoena phocoena | (none) | {AG}TGGCGGAGGACGAGCCGAAGCCG--- |
Mesoplodon bidens | (none) | ATGGCGGAGGACGAGCCGAAGCCG---ACC |
Tasmacetus shepherdi | (none) | ATGGCGGAGGACGAGCCGAAGCCG---ACC |
Orcinus orca | (none) | ATGGCGGAGGACGAGCCAAAGCTG---ACC |
Globicephala macrorhynchus | (none) | ATGGCGGAGAACGAGCCGAAGCCG---ACC |
Tursiops truncatus | (none) | ATGGCGGAGGACGAGCCGAAGCCG---ACC |
Ziphius cavirostris | (none) | ATGGCAGAGAATGAGCCGAAGCCG---CCC |
Kogia sima | (none) | ATGGCGGAGGATGAGCCGAAGCCG---ACC |
Berardius bairdii | (none) | ATGGCGGAGGACGAGCCGAATCCG---ACC |
Balaenoptera musculus | (none) | ATGGCGGAGGACGAGCCGAAGCCG---ACC |
Caperea marginata | (none) | ATGGCGGAGGACGAGCCGAAGTCG---ACC |
Balaena mysticetus | (none) | ATGGCGGAGGACGAGCCGAAGCCG---ACC |
Eubalaena glacialis | (none) | ATGGCGGAGGACGAGCCGAAGCCG---ACC |
Eubalaena australis | (none) | ATGGCGGAGGACGAGCCGAAGCCG---ACC |
Balaenoptera edeni brydei | (none) | ATGGCGGAGGACGAGCCGAAGCCG---ACC |
Balaenoptera acutorostrata | (none) | ATGGCGGAGGACGAGCCGAAGCCG---ACC |
Balaenoptera bonaerensis | (none) | ATGGCGGAGGACGAGCCGAAGCCG---ACC |
Eschrichtius robustus | (none) | ATGGCGGAGGACGAGCCGAAGCCG---ACC |
Balaenoptera physalus | (none) | ATGGCGGAGGACGAGCCGAAGCCG---ACC |
Megaptera novaeangliae | (none) | ATGGCGGAGGACGAGCCGAAGCCG---ACC |
Sorex araneus | (none) | ATGGCGGAGGACGGGGCGCAGAAG---CCG |
Choloepus hoffmanni | (none) | ATGGCAGAGGACGGGCCACAGCAG---CCA |
Otolemur garnettii | (none) | ATGGCGGAGGATGGACCGCAGCAG---CCA |
Callithrix jacchus | (none) | ATGGCGGAGGACGGGCCCCAGCAG---CTG |
Aotus nancymaae | (none) | ATGGCAGAGGACAGGCCGCAGCAG---CTG |
Saimiri boliviensis | (none) | ATGGCAGAGGACGGGCCGCAGCAG---CTG |
Nomascus leucogenys | (none) | ATGGTGGAGGACAGGCCGCAGCAG---CCG |
Pongo abelii | (none) | ATGGCGGAGGACAGGCCGCAGCAG---CTG |
Pan paniscus | (none) | ATGGCGGAGGACAGGCCACAGCAG---CCG |
Pan troglodytes | (none) | ATGGCGGAGGACAGGCCACAGCAG---CCG |
Gorilla gorilla | (none) | ATGGCGGAGGACAGGCCGCAGCAG---CCG |
Homo sapiens | (none) | ATGGCGGAGGACAGGCCGCAGCAG---CCG |
Nasalis larvatus | (none) | ATGGCGGAGGACAGGCCAC---------?? |
Chlorocebus sabaeus | (none) | ATGGCGGAGGACAGGCCGCAGCAG---CCA |
Papio anubis | (none) | ATGGCGGAGGACAGGCCGCAGCAG---CCA |
Papio hamadryas | (none) | ATGGCGGAGGACAGGCCGCAGCAG---CCA |
Macaca nemestrina | (none) | ATGGCAGAGGACAGGCCGCAGCAG---CCA |
Macaca fascicularis | (none) | ATGGCGGAGGACAGGCCGCAGCAG---CCA |
Macaca mulatta | (none) | ATGGCGGAGGACAGGCCGCAGCAG---CCA |
Cercocebus atys | (none) | ATGGCGGAGGACAGGCCACAGCAG---CCA |
Mandrillus leucophaeus | (none) | ATGGCGGAGGACAGGCCACAGCAG---CCA |
Colobus angolensis | (none) | ATGGCGGAGGACAGGCCGCAGCAG---CCG |
Rhinopithecus roxellana | (none) | ATGGCGGAGGACAGGCCGCAGCAG---CCG |
Condylura cristata | (none) | ATGGCGGAGGATGGGCCGCAGAAG---CCA |
Dasypus novemcinctus | (none) | ATGGCGCAGGACGGGCCACAGCAG---CCG |
Pteronotus parnellii | (none) | ATGGCAGAGGACGGGCCGAAGCAG---GCA |
Oryctolagus cuniculus | (none) | ATGGCGGAGGAGGCGCCGCAGCGG---CCG |
Acinonyx jubatus | (none) | ATGGCGGAGGACGGGCCCAAGCCA---CTG |
Felis catus | (none) | ATGGCGGAGGACGGGCCCAAGCCG---CCG |
Lynx pardinus | (none) | ATGGCGGAGGACGGGCCCAAGCCA---CCG |
Canis lupus | (none) | ATGGCGGAGGACGGGCCGAAGCAG---CCG |
Mustela putorius | (none) | ATGGCGGAGGACGGGCCGAAGCAG---CCG |
Leptonychotes weddellii | (none) | ATGGCGGAGGACGGGCCGAAGCAG---CCG |
Odobenus rosmarus | (none) | ATGGCAGAGGACGGGCCGAAGCAG---CCG |
Eptesicus fuscus | (none) | ATGGCGGAGGACGGGCCGAAG------CCG |
Myotis davidii | (none) | ATGGCAGAGGACGGGCCGAAGCAG---CCG |
Myotis brandtii | (none) | ATGGCAGAGGACGGGCCGAAGCAG---CCA |
Myotis lucifugus | (none) | ATGGCGGAGGACGGGCCGAAGCAG---CCA |
Marmota marmota | (none) | ATGGCGGAGGACGGGCCGCAGAAG---CAG |
Spermophilus tridecemlineatus | (none) | ATGGCGGAGGACGGGCCGCAGAAA---CAG |
Tarsius syrichta | (none) | ATGGCGGGGGATGGGCCACAGCAG---CCA |
Microcebus murinus | (none) | ATGGCGGAGGACAGGCCGCAGCAG---CCA |
Propithecus coquereli | (none) | ATGGCGGAGGACGGGCCGCAGCAG---CCA |
Eulemur flavifrons | (none) | ATGGCGGAGGACGGGCCGCAGCAG---CCA |
Eulemur macaco | (none) | ATGGCGGAGGACGGGCCGCAGCAG---CCA |
Rhinolophus ferrumequinum | (none) | ATGGCAGAGGACGGGCCAAAGCAG---CCA |
Rousettus aegyptiacus | (none) | ATGGCGGAGGACGGGCCGAAGCAG---CCC |
Eidolon helvum | (none) | ATGGCAGGGGAGGGGCCGAAGCAG---CCA |
Pteropus alecto | (none) | ATGGCAGAGGACGGGCCGAAGCAG---CCA |
Pteropus vampyrus | (none) | ATGGCAGAGGACGGGCCGAAGCAG---CCA |
Manis javanica | (none) | ATGGCAGAGGACGGGCCGAAGCAG---CCA |
Ailuropoda melanoleuca | (none) | ATGGCAGAGGACGCGCCGAAGCAG---CCG |
Columns
None of the columns has a description.