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Matrix 41840 of Study 20488

About Citation title: "Unravelling Diaporthe species associated with grapevine dieback in China".
About Study name: "Unravelling Diaporthe species associated with grapevine dieback in China".
About This study is part of submission 20488 (Status: Published).

Matrices

Title: Diaporthe grapevine dieback ITS EF BT CAL

Rows

Taxon Label Row Segments Characters 1?–30
Diaporthe alleghaniensis CBS_495.72  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe alnea CBS_146.46  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe alnea CBS_159.47  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe amygdali CBS_126679  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe amygdali CBS_111811  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe angelicae CBS_111592  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe angelicae CBS_100871  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe apiculata CGMCC_3.17533  (none) ---------------------GGGATCATT
Diaporthe apiculatum LC3187  (none) ---------------------GGGATCATT
Diaporthe arengae CBS_114979  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe bicincta CBS_121004  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe biguttusis CGMCC_3.17081  (none) ------------------------------
Diaporthe biguttusis CGMCC_3.17082  (none) ------------------------------
Diaporthe celastrina CBS_139.27  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe citri CBS_135422  (none) ---------------TGCGGAGGGATCATT
Diaporthe citri AR4469  (none) ---------------TGCGGAGGGATCATT
Diaporthe citrichinensis ZJUD_34  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe citrichinensis ZJUD_85  (none) ------------------------------
Diaporthe discoidispora ZJUD_87  (none) ------------------------------
Diaporthe ellipicola CGMCC_3.17084  (none) ------------------------------
Diaporthe ellipicola CGMCC_3.17085  (none) ------------------------------
Diaporthe endophytica CBS_133811  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe endophytica LGMF_911  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe eres AR5193  (none) ----------------GCGGAGGGATCATT
Diaporthe garethjonesii MFLUCC_12.0542A  (none) -----------------CGGAGGGATCATT
Diaporthe gulyae BRIP_54025  (none) --------------------AGGGATCATT
Diaporthe gulyae BRIP_53158  (none) --------------------AGGGATCATT
Diaporthe helicis AR5211  (none) ----------------GCGGAGGGATCATT
Diaporthe kochmanii BRIP_54033  (none) --------------------AGGGATCATT
Diaporthe kochmanii BRIP_54034  (none) --------------------AGGGATCATT
Diaporthe longicicola CGMCC_3.17089  (none) ------------------------------
Diaporthe longicicola CGMCC_3.17090  (none) ------------------------------
Diaporthe mahothocarpus CGMCC_3.15181  (none) --------------------AGGGATCATT
Diaporthe mahothocarpus CGMCC_3.15182  (none) --------------------AGGGATCATT
Diaporthe musigena CBS_129519  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe neilliae CBS_144.27  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe perseae CBS_151.73  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe phragmitis CBS_138897  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe pseudophoenicicola CBS_462.69  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe pseudophoenicicola CBS_176.77  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe pulla CBS_338.89  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe sojae FAU635  (none) ----------------GCGGAGGGATCATT
Diaporthe sojae CBS_116019  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe sojae FAU455  (none) ----------------GCGGAGGGATCATT
Diaporthe sojae DP0601  (none) ----------------GCGGAGGGATCATT
Diaporthe sojae AR3602  (none) ----------------GCGGAGGGATCATT
Diaporthe sojae BRIP_54033  (none) --------------------AGGGATCATT
Diaporthe tectonae MFLUCC_12.0777  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe tulliensis BRIP_62248a  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe unshiuensis ZJUD52  (none) ------------------------------
Diaporthe unshiuensis ZJUD50  (none) ------------------------------
Diaporthe vaccinii CBS_160.32  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe vaccinii CBS_122116  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthella corylina CBS_121124  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe eres MFLUCC_16.1409  (none) CTCCGTAGGTGAACCTGCGGAGGGATCATT
Diaporthe sojae MFLUCC_16.1426  (none) CTCCGTAGGGGAACCTGCGGAGGGATCATT
Diaporthe eres MFLUCC_16.1412  (none) TTCCGTAGGTGAACCTGCGGAGGGATCATT
Diaporthe pescicola MFLUCC_16.1424  (none) TTCCGTAGGTGAACCTGCGGAGGGATCATT
Diaporthe pescicola MFLUCC_16.1425  (none) TTCCGTAGGTGAACCTGCGGAGGGATCATT
Diaporthe eres MFLUCC_16.1416  (none) TTCCGTAGGTGAACCTGCGGAGGGATCATT
Diaporthe guangxiensis MFLUCC_16.1422  (none) TTCCGTAGGTGAACCTGCGGAGGGATCATT
Diaporthe sojae MFLUCC_16.1429  (none) CCCCGTAGGTGAACCTGCGGAGGGATCATT
Diaporthe guangxiensis MFLUCC_16.1419  (none) TTCCGTAGGTGAACCTGCGGAGGGATCATT
Diaporthe guangxiensis MFLUCC_16.1423  (none) TTCCGTAGGTGAACCTGCGGAGGGATCATT
Diaporthe guangxiensis MFLUCC_16.1421  (none) TTCCGTAGGTGAACCTGCGGAGGGATCATT
Diaporthe sojae MFLUCC_16.1428  (none) CCCCGTAGGTGAACCTGCGGAGGGATCATT
Diaporthe guangxiensis MFLUCC_16.1420  (none) TTCCGTAGGTGAACCTGCGGAGGGATCATT
Diaporthe eres MFLUCC_16.1413  (none) CTCCGTAGGTGAACCTGCGGAGGGATCATT
Diaporthe eres MFLUCC_16.1414  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe hubeiensis MFLUCC_16.1436  (none) CTCCGTAGGTGAACCTGCGGAGGGATCATT
Diaporthe hubeiensis MFLUCC_16.1437  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe hubeiensis MFLUCC_16.1434  (none) TCCCGTAGGTGAACCTGCGGAGGGATCATT
Diaporthe hubeiensis MFLUCC_16.1438  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe eres MFLUCC_16.1406  (none) TTCCGTAGGTGAACCTGCGGAGGGATCATT
Diaporthe sojae MFLUCC_16.1427  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe unshiuensis MFLUCC_16.1430  (none) CTCCGTAGGTGAACCTGCGGAGGGATCATT
Diaporthe unshiuensis MFLUCC_16.1431  (none) CTCCGTAGGTGAACCTGCGGAGGGATCATT
Diaporthe hubeiensis MFLUCC_16.1435  (none) TCCCGTAGGTGAACCTGCGGAGGGATCATT
Diaporthe gulyae MFLUCC_16.1432  (none) TTCCGTAGGGTAACCTGCGGAGGGATCATT
Diaporthe gulyae MFLUCC_16.1433  (none) TCCCGTAGGTGAACCTGCGGAGGGATCATT
Diaporthe eres MFLUCC_16.1411  (none) TTCCGTAGGTGAACCTGCGGAGGGATCATT
Diaporthe eres MFLUCC_16.1410  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe eres MFLUCC_16.1415  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe eres MFLUCC_16.1407  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe eres MFLUCC_16.1417  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe eres MFLUCC_16.1408  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe eres MFLUCC_16.1418  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe eres MFLUCC_16.0097  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe pescicola MFLUCC_16.0105  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe pescicola MFLUCC_16.0106  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe eres MFLUCC_16.0099  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe momicola MFLUCC_16.0113  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe momicola MFLUCC_16.0114  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe eres MFLUCC_16.0109  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe taoicola MFLUCC_16.0117  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe taoicola MFLUCC_16.0118  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe amygdali CBS_115620  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe amygdali CBS_120840  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Diaporthe eres LCM11401a  (none) ----------------GCGGAGGGATCATT
Phomopsis cotoneastri CBS_439.82  (none) --------------------AGGGATCATT
Diaporthe eres FAU506  (none) ----------------GCGGAGGGATCATT
Phomopsis fukushii MAFF_625029  (none) ------------------------------
Phomopsis fukushii AR4369  (none) ------------------------------
Diaporthe eres AR4373  (none) ------------------------------
Diaporthe cf nobilis_CBS_113470  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT
Phomopsis fukushii AR4349  (none) ------------------------------
Phomopsis castaneae DNP128  (none) ------------------------------
Diaporthe cf nobilis_CBS587_79  (none) CTCCGTTGGTGAACCAGCGGAGGGATCATT

Columns

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