@ARTICLE{TreeBASE2Ref17462,
author = {Michelle T. Seidl},
title = {Phylogenetic relationships within Cortinarius subgenus Myxacium, sections Defibulati and Myxacium.},
year = {2000},
keywords = {Agaricales; Basidiomycetes; clamp; connections; ectomycorrhizal; nuclear rDNA; parsimony, phylogeny},
doi = {},
url = {http://www.jstor.org/stable/3761477},
pmid = {},
journal = {Mycologia},
volume = {92},
number = {6},
pages = {1091--1102},
abstract = {Phylogenetic relationships of two sections from subgenus Myxacium in the brown-spored agaric genus Cortinarius were studied using nuclear DNA sequence data from the internal transcribed spacers (ITS1 and ITS2) and the 5.88 rRNA gene of 23 species of Cortinarius, including seven subgenera. Of these, ten species represent the focal study group from sections Defibulati and Myxacium, three species represent three additional sections within subgenus Myxacium, and ten species represent six remaining subgenera within Cortinarius. Phylogenies inferred using parsimony and maximum likelihood strongly supported the two sections as monophyletic, but did not support the subgenus Myxacium as a distinct lineage. Neither method of analysis resolved relationships below the sectional level. Morphological traits were examined for the two monophyletic groups traditionally classified as sections Defibulati and Myxacium. Absence of clamp connections is a synapomorphy of section Defibulati. Cladistic analyses confirm that members sampled from subgenus Myxacium in other sections are more closely allied with other subgenera, suggesting the current taxonomy needs revision to reflect phylogenetic relationships.}
}
Matrix 457 of Study 947
Citation title:
"Phylogenetic relationships within Cortinarius subgenus Myxacium, sections Defibulati and Myxacium.".
This study was previously identified under the legacy study ID S483
(Status: Published).
Matrices
Description: Legacy TreeBASE Matrix ID = M1327
Rows
Taxon Label |
Row Segments |
Characters 1?–30 |
Cortinarius mucosus |
(none)
|
TTTCCGTAGGTGAACCTGCGGAAGGATCAT |
Cortinarius muscigenus |
(none)
|
TTTCCGTAGGTGAACCTGCGGAAGGATCAT |
Cortinarius vernicosus Seidl |
(none)
|
TTTCCGTAGGTGAACCTGCGGAAGGATCAT |
Cortinarius favrei |
(none)
|
TTTCCGTAGGTGAACCTGCGGAAGGATCAT |
Cortinarius absarokensis |
(none)
|
TTTCCGTAGGTGAACCTGCGGAAGGATCAT |
Cortinarius trivialis |
(none)
|
TTTCCGTAGGTGAACCTGCGGAAGGATCAT |
Cortinarius mucifluus |
(none)
|
TTTCCGTAGGTGAACCTGCGGAAGGATCAT |
Cortinarius vanduzerensis MTS4243 |
(none)
|
TTTCCGTAGGTGAACCTGCGGAAGGATCAT |
Cortinarius vanduzerensis |
(none)
|
TTTCCGTAGGTGAACCTGCGGAAGGATCAT |
Cortinarius pseudosalor |
(none)
|
TTTCCGTAGGTGAACCTGCGGAAGGATCAT |
Cortinarius umbilicatus |
(none)
|
TTTCCGTAGGTGAACCTGCGGAAGGATCAT |
Cortinarius traganus |
(none)
|
??TCCGTAGGTGAACCTGCGGAAGGATCAT |
Cortinarius californicus |
(none)
|
TTTCCGTAGGTGAACCTGCGGAAGGATCAT |
Cortinarius salor |
(none)
|
TTTCCGTAGGTGAACCTGCGGAAGGATCAT |
Cortinarius allutus |
(none)
|
TTTCCGTAGGTGAACCTGCGGAAGGATCAT |
Cortinarius limonius |
(none)
|
TTTCCGTAGGTGAACCTGCGGAAGGATCAT |
Cortinarius vibratilis |
(none)
|
TTTCCGTAGGTGAACCTGCGGAAGGATCAT |
Cortinarius delibutus |
(none)
|
TTTCCGTAGGTGAACCTGCGGAAGGATCAT |
Cortinarius caninus |
(none)
|
TTTCCGTAGGTGAACCTGCGGAAGGATCAT |
Cortinarius hercynicus |
(none)
|
?????????????????????????????? |
Cortinarius olivaceopictus |
(none)
|
TTTCCGTAGGTGAACCTGCGGAAGGATCAT |
Cortinarius crocea |
(none)
|
TTTCCGTAGGTGAACCTGCGGAAGGATCAT |
Cortinarius idahoensis |
(none)
|
TTTCCGTAGGTGAACCTGCGGAAGGATCAT |
Columns
None of the columns has a description.