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Citation
Taxa
Matrices
Trees
Analyses
Matrix 4630 of Study 10214
Citation title: "Pythium apinafurcum sp. nov.: its morphology, molecular phylogeny, and infectivity for plants".
This study was previously identified under the legacy study ID S2231
(Status: Published).
Matrices
Title: ITS rDNA
Description: Legacy TreeBASE Matrix ID = M4899
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Phytophthora cactorum | (none) | CCACACCTAAAAA----CT--TTCCACGTG |
| Phytophthora capsici | (none) | CCACACCTAAAAAA---CT--TTCCACGTG |
| Pythium acanthicum | (none) | CCACACCT-AAA---AACT--TTCCACGTG |
| Pythium acrogynum | (none) | CCACACCTTAA----AACT--ATCCACGTG |
| Pythium adhaerense | (none) | CCACACCAAAAA---A-CT--TTCCACGTG |
| Pythium anandrum | (none) | CCACACCAAAAAA----CT--TTCCACGTG |
| Pythium angustatum | (none) | CCACACCA-AAA---AACT--TTCCACGTG |
| Pythium aphanidermatum | (none) | CCACACCATAAA---AACT--TTCCACGTG |
| Pythium apinafurcum UZ298 | (none) | CCACACCTAAAA---ATCTCTTTCCACGTG |
| Pythium apinafurcum UZ299 | (none) | CCACACCTAAAA---ATCTCTTTCCACGTG |
| Pythium apinafurcum UZ300 | (none) | CCACACCTAAAA---ATCTCTTTCCACGTG |
| Pythium apinafurcum UZ301 | (none) | CCACACCTAAAA---ATCTCTTTCCACGTG |
| Pythium apinafurcum UZ302 | (none) | CCACACCTAAAA---ATCTCTTTCCACGTG |
| Pythium apinafurcum UZ303 | (none) | CCACACCTAAAA---ATCTCTTTCCACGTG |
| Pythium aquatile | (none) | CCACACCAAAAA---AACT--TTCCACGTG |
| Pythium arrhenomanes | (none) | CCACACCA-AAA---AACT--TTCCACGTG |
| Pythium boreale | (none) | CCACACCTAAAAA---TCT--TTCCACGTG |
| Pythium capillosum | (none) | CCACACCATAAA---A-CT--TTCCACGTG |
| Pythium chamaehyphon | (none) | CCACACCTAAAAA-CATCT--TTCCACGTG |
| Pythium cucurbitacearum | (none) | CCACACCTAAAAAACACCC--TTCCACGTG |
| Pythium dimorphum | (none) | CCACACCAAAAA-----CT--TTCCACGTG |
| Pythium dissimile | (none) | CCACACCA-TAA---AACT--TTCCACGTG |
| Pythium dissotocum | (none) | CCACACCAAAAA---AACT--TTCCACGTG |
| Pythium echinulatum | (none) | CCACACCTTAA----AACT--ATCCACGTG |
| Pythium graminicola | (none) | CCACACCA-TAA---AACT--TTCCACGTG |
| Pythium grandisporangium | (none) | CCACACCTAAAA---A-CT--TTCCACGTG |
| Pythium helicandrum | (none) | CCACACCAAAAAA----CT--TTCCACGTG |
| Pythium helicoides | (none) | CCACACCTAAAAA-CATCT--TTCCACGTG |
| Pythium heterothallicum | (none) | CCACACCTAAAA---AACT--TTCCACGTG |
| Pythium inflatum | (none) | CCACACCA-TAA---AACT--TTCCACGTG |
| Pythium insidiosum | (none) | CCACACCTAAAA---AACT--TTCCACGTG |
| Pythium intermedium | (none) | CCACACCTAAAA---AACT--TTCCACGTG |
| Pythium iwayamae | (none) | CCACACCTAAAA---AACT--TTCCACGTG |
| Pythium macrosporum | (none) | CCACACCTAAAA---AACT--TTCCACGTG |
| Pythium marsipium | (none) | CCACACCTAAA----AACT--TTCCACGTG |
| Pythium mastophorum | (none) | CCACACCTAAAA---AACT--TTCCACGTG |
| Pythium middletonii | (none) | CCACACCAAAAAT--A-CT--TTCCACGTG |
| Pythium monospermum | (none) | CCACACCAAAAA---AACT--TTCCACGTG |
| Pythium nagaii | (none) | CCAGACCTAAAA---AACT--TTCCACGTG |
| Pythium oedichilum | (none) | CCACACCTAAAAA---TCT--TTCCACGTG |
| Pythium okanoganense | (none) | CCACACCTAAAA---AACT--TTCCACGTG |
| Pythium oligandrum | (none) | CCACACCT-AAA---AACT--TTCCACGTG |
| Pythium orthogonon | (none) | CCACACCAAAAA---AACT--TTCCACGTG |
| Pythium pachycaule | (none) | CCACACCAAAAA---A-CT--TTCC{AG}C |
| Pythium paroecandrum | (none) | CCACACCTAAAA---A-CT--TTCCACGTG |
| Pythium perplexum | (none) | CCACACCAAAAA---AACT--TTCCACGTG |
| Pythium pleroticum | (none) | CCACACCAAAAAC--AACT--TTCCACGTG |
| Pythium plurisporium | (none) | CCACACCATAAA---AACT--TTCCACGTG |
| Pythium polymastum | (none) | CCACACCTAATA---AACT--TTCCACGTG |
| Pythium pyrilobum | (none) | CCACACCATAAA---AACT--TTCCACGTG |
| Pythium rostratum | (none) | CCACACCAAAAAA--A-CT--ATCCACGTG |
| Pythium salpingophorum | (none) | CCACACCATAAA---AACT--TTCCACGTG |
| Pythium spinosum | (none) | CCACACCTAAAA---AACT--TTCCACGTG |
| Pythium splendens | (none) | CCACACTTTAAAA----CT--GTCCACGTG |
| Pythium sylvaticum | (none) | CCACACCTAAAA---AACT--TTCCACGTG |
| Pythium torulosum | (none) | CCACACCATAAA---AACT--TTCCACGTG |
| Pythium ultimum | (none) | CCACACTTTAAAA--AACT--GTCCACGTG |
| Pythium vanterpoolii | (none) | CCACACCA-AAA---AACT--TTCCACGTG |
Columns
None of the columns has a description.
