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Citation
Taxa
Matrices
Trees
Analyses
Matrix 53266 of Study 25538
Citation title: "Five novel Lasiodiplodia species associated with blueberries in China".
Study name: "Five novel Lasiodiplodia species associated with blueberries in China".
This study is part of submission 25538
(Status: Published).
Matrices
Title: Lasiodiplodia
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Diplodia mutila C | (none) | ------GAAGTTCGAGAAGGTAAGAG---- |
| Diplodia seriata | (none) | CATCGAGAAGTTCGAGAAGGTAAGAG---- |
| Lasiodiplodia aquilari | (none) | CATCGAGAAGTTCGAGAAG-----TGAGTG |
| Lasiodiplodia avicenniae | (none) | -ATCGAAAAATTTGAGAAG-----TTCGTG |
| Lasiodiplodia avicenniae 2 | (none) | -ATCGAAAAATTTGAGAAG-----TTCGTG |
| Lasiodiplodia brasiliensis | (none) | ------------------------------ |
| Lasiodiplodia brasiliensis 2 | (none) | CATTGAGAAGTTCGAGAAGGTCCGTGCACG |
| Lasiodiplodia brasiliensis 3 | (none) | CATTGAGAAGTTCGAGAAGGTCCGTGCACG |
| Lasiodiplodia bruguierae | (none) | -ATTGAGAAATTCGAGAAGGTCCGTGCACG |
| Lasiodiplodia bruguierae 2 | (none) | -ATTGAGAAATTCGAGAAGGTCCGTGCACG |
| Lasiodiplodia caatinguensis | (none) | ------GAAGTTCGAGAAGGTCCGTGCACG |
| Lasiodiplodia caatinguensis 2 | (none) | ------GAAGTTCGAGAAGGTCCGTGCACG |
| Lasiodiplodia chinensis | (none) | CATCGAAAAATTCGAGAAG-----TTCGTG |
| Lasiodiplodia chinensis 2 | (none) | CATCGAAAAATTCGAGAAG-----TTCGTG |
| Lasiodiplodia chinensis 3 | (none) | CATCGAAAAATTCGAGAAG-----TTCGTG |
| Lasiodiplodia chinensis 4 | (none) | CATCGAAAAATTCGAGAAG-----TTCGTG |
| Lasiodiplodia citricola | (none) | CATCGAGAAGTTCGAGAAG-----TGAGTG |
| Lasiodiplodia citricola 2 | (none) | CATCGAGAAGTTCGAGAAG-----TGAGTG |
| Lasiodiplodia clavispo | (none) | CATCGAAAAGTTCGAAAAGGTCAGTACTCA |
| Lasiodiplodia clavispo 2 | (none) | CATCGAAAAGTTCGAAAAGGTCAGTACTCA |
| Lasiodiplodia crassispora | (none) | ------GAAGTTCGAGAAGGCAAG------ |
| Lasiodiplodia crassispora 2 | (none) | ------GAAGTTCGAGAAGGCAAG------ |
| Lasiodiplodia curvata | (none) | CATTGAGAAGTTCGAGAAGGTCCGTGCACG |
| Lasiodiplodia curvata 2 | (none) | CATTGAGAAGTTCGAGAAGGTCCGTGCACG |
| Lasiodiplodia euphorbicola | (none) | CATCGAGAAGTTCGAGAAG-----TGAGTG |
| Lasiodiplodia euphorbicola 2 | (none) | ------------------------------ |
| Lasiodiplodia euphorbicola 3 | (none) | CATCGAGAAGTTCGAGAAG-----TGAGTG |
| Lasiodiplodia exigua B | (none) | CATCGAGAAATTCGAGAAGGTCCGTGCACG |
| Lasiodiplodia exigua C | (none) | CATCGAGAAATTCGAGAAGGTCCGTGCACG |
| Lasiodiplodia fujianen | (none) | AATTGAAAAGTTCGAGAAGGTCCGTGCGCT |
| Lasiodiplodia gilanensis | (none) | CATCGAGAAGTTCGAGAAGGTCCGTGCGCT |
| Lasiodiplodia gilanensis 2 | (none) | CATCGAGAAGTTCGAGAAGGTCCGTGCGCT |
| Lasiodiplodia gonubien | (none) | -----------------------------G |
| Lasiodiplodia gonubiensis 2 | (none) | -----------------------------G |
| Lasiodiplodia gravistr | (none) | CATCGAGAAGTTCGAGAAG-----TGAGTG |
| Lasiodiplodia gravistr 2 | (none) | -------------GAGAAG-----TGAGTG |
| Lasiodiplodia henanica | (none) | GATCGAGAAGTTCGAAAAG-----TCAGTG |
| Lasiodiplodia hormozganensis | (none) | CATCGAGAAGTTCGAGAAG-----TGAGTG |
| Lasiodiplodia hormozganensis 2 | (none) | CATCGAGAAGTTCGAGAAG-----TGAGTG |
| Lasiodiplodia iraniens | (none) | CATCGAGAAGTTCGAGAAGGTCCGTGCGAT |
| Lasiodiplodia iraniens 2 | (none) | CATCGAGAAGTTCGAGAAGGTCCGTGCGAT |
| Lasiodiplodia iraniens 3 | (none) | TATTGAGAAGTTCGAGAAGGTCCGTGCGAT |
| Lasiodiplodia iraniens 4 | (none) | TATTGAGAAGTTCGAGAAGGTCCGTGCGAT |
| Lasiodiplodia iraniens 5 | (none) | TATTGAGAAGTTCGAGAAGGTCCGTGCGAT |
| Lasiodiplodia irregula | (none) | -------AATTTCGAGAAGGTCCGTGCACG |
| Lasiodiplodia laeliocattleyae | (none) | ------------------------------ |
| Lasiodiplodia laeliocattleyae 2 | (none) | ------------------------------ |
| Lasiodiplodia laosensi | (none) | CATTGAGAAGTTCGAGAAGGTCCGTGCACG |
| Lasiodiplodia laosensi 2 | (none) | CATTGAGAAGTTCGAGAAGGTCCGTGCACG |
| Lasiodiplodia lignicola | (none) | CATCGAAAAATTCGAGAAG-----TTCGTG |
| Lasiodiplodia macrocon | (none) | ------------------------------ |
| Lasiodiplodia macrospo | (none) | GATCGAAAAATTTGAGAAG-----TTCGTG |
| Lasiodiplodia mahajangana | (none) | CATTGAGAAATTCGAGAAGGTCCGTGCACG |
| Lasiodiplodia mahajangana 2 | (none) | CATTGAGAAATTCGAGAAGGTCCGTGCACG |
| Lasiodiplodia margaritacea | (none) | ------GAAGTTCGAGAAGGTAAGAA---- |
| Lasiodiplodia margaritacea 2 | (none) | ------GAAGTTCGAGAAGGTAAGAA---- |
| Lasiodiplodia mediterranea | (none) | TATCGAAAAATTCGAGAAG-----TTAGTT |
| Lasiodiplodia mediterranea 2 | (none) | TATCGAAAAATTCGAGAAG-----TTAGTT |
| Lasiodiplodia microcon | (none) | ----------TTCGAGAAG-----TTCGTG |
| Lasiodiplodia missouriana | (none) | --------------------TCCGTGCGCT |
| Lasiodiplodia missouriana 2 | (none) | --------------------TCCGTGCGCT |
| Lasiodiplodia nanpinge | (none) | CATTGAGAAGTTCGAGAAGGTCCGTGCACG |
| Lasiodiplodia nanpinge 2 | (none) | CATTGAGAAGTTCGAGAAGGTCCGTGCACG |
| Lasiodiplodia paraphys | (none) | CATCGAGAAGTTCGAGAAG-----TGAGTG |
| Lasiodiplodia paraphys 2 | (none) | -------------------------GAGTG |
| Lasiodiplodia paraphys 3 | (none) | CATCGAGA-GTTCGAGAAG-----TGAGTG |
| Lasiodiplodia parva CB | (none) | CATCGAGAAGTTCGAGAAG-----TGAGTG |
| Lasiodiplodia parva CB 2 | (none) | CATCGAGAAGTTCGAGAAG-----TGAGTG |
| Lasiodiplodia plurivora | (none) | ------GAAGTTCGAGAAGGTCAGTTTTCT |
| Lasiodiplodia plurivora 2 | (none) | ------GAAGTTCGAGAAGGTCAGTTTTCT |
| Lasiodiplodia pontae C | (none) | ------GAAATTTGAGAAGGCACGTGATCC |
| Lasiodiplodia pseudotheobromae | (none) | ----------TTCGAGAAG-----TTCGTG |
| Lasiodiplodia pseudotheobromae 2 | (none) | ----------TTCGAGAAG-----TTCGTG |
| Lasiodiplodia pseudotheobromae 3 | (none) | CATCGAAAAATTCGAGAAG-----TTCGTG |
| Lasiodiplodia pseudotheobromae 3.2 | (none) | ------------------------TTCGTG |
| Lasiodiplodia pseudotheobromae 4 | (none) | ----------TTCGAGAAG-----TTCGTG |
| Lasiodiplodia pseudotheobromae 5 | (none) | ----------TTCGAGAAG-----TTCGTG |
| Lasiodiplodia pseudotheobromae 6 | (none) | ----------TTCGAGAAG-----TTCGTG |
| Lasiodiplodia pseudotheobromae C | (none) | CATCGAAAAATTCGAGAAG-----TTCGTG |
| Lasiodiplodia pyriformis | (none) | ----GAGAAGTTCGAGAAGGCAAG------ |
| Lasiodiplodia pyriformis 2 | (none) | ----GAGAAGTTCGAGAAGGCAAG------ |
| Lasiodiplodia rubropurpurea | (none) | ------GAAGTT------------------ |
| Lasiodiplodia rubropurpurea 2 | (none) | ------GAAGTT------------------ |
| Lasiodiplodia sterculiae | (none) | ------------------------------ |
| Lasiodiplodia subglobosa | (none) | CATCGAGAAGTTCGAGAAG-----TGAGTG |
| Lasiodiplodia subglobosa 2 | (none) | CATCGAGAAGTTCGAGAAG-----TGAGTG |
| Lasiodiplodia tenuicon | (none) | ------------------------TTCGTG |
| Lasiodiplodia thailandica | (none) | -----------TCGAGAAGGTCCGTGAGCT |
| Lasiodiplodia thailandica 2 | (none) | --TCGAGAAGTTCGAGAAGGTCCGTGAGCT |
| Lasiodiplodia theobromae | (none) | CATCGAGAAGTTCGAGAAGGTCCGTGCACG |
| Lasiodiplodia theobromae 2 | (none) | CATCGAGAAGTTCGAGAAGGTCCGTGCACG |
| Lasiodiplodia tropica | (none) | ----------TTCGAGAAG-----TTCGTG |
| Lasiodiplodia venezuel | (none) | ------GAAGTTCGAGAGT----------- |
| Lasiodiplodia venezuel 2 | (none) | ------GAAGTTCGAGAGT----------- |
| Lasiodiplodia viticola | (none) | --------------------TCCGTGCACG |
| Lasiodiplodia viticola 2 | (none) | --------------------TCCGTGCACG |
| Lasiodiplodia vitis CB | (none) | ------------------------------ |
Columns
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