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Matrix 53685 of Study 25209
Citation title: "Organellomic data sets confirm a cryptic consensus on (unrooted) land-plant relationships, and provide new insights into bryophyte molecular evolution".
Study name: "Organellomic data sets confirm a cryptic consensus on (unrooted) land-plant relationships, and provide new insights into bryophyte molecular evolution".
This study is part of submission 25209
(Status: Published).
Matrices
Title: Bryophyte mitochondrial DNA
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Mesostigma viride NC008240 | (none) | ------------------------------ |
| Chlorokybus atmophyticus NC009630 | (none) | ATGAGT---------------CGTTTA--- |
| Chaetosphaeridium globosum NC004118 | (none) | ATGAAC------------------------ |
| Chara vulgaris NC005255 | (none) | ATGAAATTTATG------AACAAATTT--- |
| Roya obtusa NC022863 | (none) | ATGAACAAATTT------------------ |
| Takakia ceratophylla | (none) | ACGAACAAATTGACTGGAAATGAATTG--- |
| Takakia lepidozioides | (none) | ACGAACAAATTGACTGGAAATGAATTG--- |
| Takakia lepidozioides SKQD | (none) | --GAACAAATTGACTGGAAATGAATTG--- |
| Sphagnum capillifolium | (none) | ACGAACAAATTGACTGGAAATAAATTG--- |
| Sphagnum palustre NC024521 | (none) | ACGAACAAATTGACTGGAAATAAATTG--- |
| Sphagnum girgensohinii Liu_et_al_2014a | (none) | ACGAACAAATTGACTGGA------------ |
| Sphagnum warnstorfii | (none) | ACGAACAAATTGACTGGAAATAAATTG--- |
| Andreaea rothii Liu_et_al_2014a | (none) | ATGAACAAATTGACTGGA------------ |
| Andreaea wilsonii | (none) | ATGAACAAATTGACTGGAAATAAGTTG--- |
| Andreaeobryum macrosporum | (none) | ATGAACAAATTGACTGGAAACAAGTTG--- |
| Atrichum angustatum | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Atrichum angustatum NC024520 | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Oedipodium griffithianum Cox_et_al_2004 | (none) | ------------------------------ |
| Polytrichum commune SZYG | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Tetraphis pellucida KC784953 | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Buxbaumia aphylla NC024518 | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Physcomitrella patens NC024520 | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Encalypta streptocarpa KEFD | (none) | ------------------------------ |
| Funaria hygrometrica NC024523 | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Dicranum scoparium Liu_et_al_2014a | (none) | ATGAACAAATTAACTGGA------------ |
| Leucobryum albidum VMXJ | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Scouleria aquatica BPSG | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Ceratodon purpureus FFPD | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Syntrichia filaris NC027515 | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Oxystegus tenuirostris NC028040 | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Orthotrichum stellatum NC024522 | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Ulota hutchinsiae NC024517 | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Fontinalis antipyretica | (none) | ACGAACAAATTAACTGGAAATAAGTTG--- |
| Hedwigia stellata | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Hedwigia ciliata YWNF | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Philonotis fontana ORKS | (none) | ------------------------------ |
| Racomitrium sp | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Bartramia pomiformis NC024519 | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Bryum argenteum Liu_et_al_2014a | (none) | ATGAACAAATTAACTGGA------------ |
| Plagiomnium insigne BGXB | (none) | ------------------------------ |
| Aulacomnium heterostichum WNGH | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Rosulabryum cf XWHK | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Tetraplodon fuegianus Liu_et_al_2014a | (none) | ATGAACAAATTAACTGGA------------ |
| Ptychomnion cygnisetum NC024514 | (none) | ACGAACGAATTAACTGGAAATAAGTTG--- |
| Anomodon rugelii NC016121 | (none) | ACGAACAAATTAACTGGAAATAAGTTG--- |
| Anomodon attenuatus _NC021931 | (none) | ACGAACAAATTAACTGGA------------ |
| Leucodon brachypus ZACW | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Neckera douglasii TMAJ | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Pseudotaxiphyllum elegans QKQO | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Stereodon subimponens LNSF | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Rhynchostegium serrulatum JADL | (none) | ------------------------------ |
| Calliergon cordifolium TAVP | (none) | ------------------------------ |
| Loeskeobryum brevirostre WSPM | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Thuidium delicatulum EEMJ | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Climacium americanum NC024515 | (none) | ACGAACAAATTAACTGGAAATAAGTTG--- |
| Hypnum imponens NC024516 | (none) | ACGAACAAATTAACTGGAAATAAGTTG--- |
| Timmia austriaca | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Diphyscium foliosum | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Hookeria acutifolia | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Hookeria lucens | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Sanionia uncinata NC027974 | (none) | --GAACAAATTAACTGGAAATAAGTTG--- |
| Racomitrium elongatum ABCD | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Diphyscium foliosum AWOI | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Pulvigera lyellii CMEQ | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Fontinalis antipyretica DHWX | (none) | ------------------------------ |
| Sphagnum lescurii GOWD | (none) | ---------------------AAATTG--- |
| Syntrichia princeps GRKU | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Buxbaumia aphylla HRWG | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Tetraphis pellucida HVBQ | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Leucodon julaceus IGUH | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Bryum argenteum JMXW | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Climacium dendroides MIRS | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Dicranum scoparium NGTD | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Anomodon attenuatus QMWB | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Sphagnum palustre RCBT | (none) | ATGAACAAATTGACTGGAAATAAATTG--- |
| Racomitrium varium RDOO | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Leucobryum glaucum RGKI | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Sphagnum recurvum UHLI | (none) | ------------------------------ |
| Claopodium rostratum VBMM | (none) | --------------------------G--- |
| Andreaea rupestris WOGB | (none) | ATGAACAAATTGACTGGAAATAAGTTG--- |
| Physcomitrium sp YEPO | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Timmia austriaca ZQRI | (none) | ATGAACAAATTAACTGGAAATAAGTTG--- |
| Atrichum angustatum ZTHV | (none) | ----------------------AGTTG--- |
| Cycas taitungensis NC010303 | (none) | ATGGAATTCTCT------------------ |
| Ginkgo biloba NC027976 | (none) | ACGAAAGTCTAT------------------ |
| Pinus parviflora IIOL | (none) | ATGAAATTAAAT------------------ |
| Araucaria rulei XTZO | (none) | ------------------------------ |
| Taxus baccata WWSS | (none) | ------------------------------ |
| Podocarpus rubens XLGK | (none) | ------------------------------ |
| Gnetum gnemon | (none) | ATG---GTTTGT------------------ |
| Liriodendron tulipifera NC021152 | (none) | ACGAAATTATAT------------------ |
| Vitus vinifera NC012119 | (none) | ATGGAATTCTCT------------------ |
| Nicotiana tabacum NC006581 | (none) | ATGGAACTTTCT------------------ |
| Zea mays NC007982 | (none) | ATGGAATTCTCA------------------ |
| Adiantum tenerum BMJR | (none) | ------------------------------ |
| Acorus americanus MTII | (none) | ------------------------------ |
| Ceratophyllum demersum NPND | (none) | ---------TCT------------------ |
| Sarcandra glabra OSHQ | (none) | ------------------------------ |
| Nymphaea sp PZRT | (none) | ------------------------------ |
| Illicium parviflorum ROAP | (none) | ------------------------------ |
| Amborella trichopoda URDJ | (none) | ------------------------------ |
| Magnolia grandiflora WBOD | (none) | ATGGAATTCTCT------------------ |
| Isoetes sp PYHZ | (none) | ------------------------------ |
| Huperzia squarrosa NC017755 | (none) | ATGAACAGATTG------------------ |
| Equisetum hyemale JVSZ | (none) | ------------------------------ |
| Tmesipteris parva ALVQ | (none) | ------------------------------ |
| Botrypus virginianus BEGM | (none) | ------------------------------ |
| Angiopteris evecta NHCM | (none) | ------------------------------ |
| Leiosporoceros dussii AY894803 | (none) | ------------------------------ |
| Anthoceros angustus IQJU | (none) | --GAACAAATTT------------------ |
| Paraphymatoceros hallii FAJB | (none) | --GAACAAATTT------------------ |
| Phymatoceros bulbiculosus DQ268948 | (none) | ------------------------------ |
| Nothoceros vincentianus TCBC | (none) | ACGAACAAATTT------------------ |
| Megaceros aenigmaticus NC012651 | (none) | ACGAACAAATTT------------------ |
| Phaeoceros laevis NC013765 | (none) | ACGAACAAATTT------------------ |
| Porella cordaeana | (none) | ATGAACAAATTG------------------ |
| Marchantia paleacea M68929 | (none) | ATGAACAAATTG------------------ |
| Marchantia polymorpha NC001660 | (none) | ATGAACAAATTG------------------ |
| Phaeomegaceros coriaceus AKXB | (none) | ------------------------------ |
| Nothoceros aenigmaticus DXOU | (none) | ATGAACAAATTT------------------ |
| Marchantia paleacea HMHL | (none) | ATGAACAAATTG------------------ |
| Ptilidium pulcherrimum HPXA | (none) | ATGAACAAATTG------------------ |
| Marchantia paleacea IHWO | (none) | ATGAACAAATTG------------------ |
| Conocephalum conicum ILBQ | (none) | ATGAACAAATTG------------------ |
| Scapania nemorea IRBN | (none) | ATGAACAAATTG------------------ |
| Marchantia polymorpha JPYU | (none) | ATGAACAAATTG------------------ |
| Schistochila sp LGOW | (none) | ATGAACAAATTG------------------ |
| Barbilophozia barbata OFTV | (none) | ATGAACAAATTG------------------ |
| Calypogeia fissa RTMU | (none) | ------------------------------ |
| Marchantia emarginata TFYI | (none) | ATGAACAAATTG------------------ |
| Frullania sp TGKW | (none) | ATGAACAAATTG------------------ |
| Anthoceros agrestis TWUW | (none) | ------------------------------ |
| Megaceros flagellaris UCRN | (none) | ATGAACAAATTT------------------ |
| Porella pinnata UUHD | (none) | ATGAACAAATTG------------------ |
| Phaeoceros carolinianus WCZB | (none) | ------------------------------ |
| Phaeoceros carolinianus WEEQ | (none) | ------------------------------ |
| Bazzania trilobata WZYK | (none) | ATGAACAAATTG------------------ |
| Odontoschisma prostratum YBQN | (none) | ------------------------------ |
| Pallavicinia lyellii YFGP | (none) | ATGAACAAATTG------------------ |
| Herbertus stramineus | (none) | ------------------------------ |
| Lejeunea patens | (none) | ATGAACAAATTG------------------ |
| Dumortiera hirsuta | (none) | ATGAACAAATTG------------------ |
| Mylia taylorii | (none) | ATGAACAAATTG------------------ |
| Pallavicinia lyellii | (none) | ATGAACAAATTG------------------ |
| Pleurozia purpurea NC013444 | (none) | ATGAACAAATTG------------------ |
| Ricciocarpos natans WJLO | (none) | ATGAACAAATTG------------------ |
| Monoclea gottschei TFDQ | (none) | ------------------------------ |
| Lunularia cruciata TXVB | (none) | ATGAACAAATTG------------------ |
| Radula lindenbergiana BNCU | (none) | ATGAACAAATTG------------------ |
| Aneura pinguis NC026901 | (none) | ATGAACAAATTG------------------ |
| Blasia sp AEXY | (none) | ATGAACAAATTG------------------ |
| Pellia sp PIUF | (none) | ---AACAAATTG---------------GCC |
| Metzgeria crassipilis NRWZ | (none) | ATGAACAAATTG------------------ |
| Pellia neesiana JHFI | (none) | ---AACAAATTG---------------GCC |
| Sphaerocarpos texanus HERT | (none) | ATGAACAAATTG------------------ |
| Porella navicularis KRUQ | (none) | ATGAACAAATTG------------------ |
| Treubia lacunosa NC016122 | (none) | ATGAACAAATTG------------------ |
Columns
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