#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 19, 2024; 23:12 GMT TreeBASE (cc) 1994-2008 Study reference: Harrington F., & Potter D. 1997. Phylogenetic relationships within Sarcoscypha (Sarcoscyphineae, Pezizales) based upon nucleotide sequences of the internal transcribed spacer of nuclear ribosomal DNA. Mycologia, 89(2): 258-267. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S254] BEGIN TAXA; TITLE TaxonLabelSet9627; DIMENSIONS NTAX=23; TAXLABELS Pithya_cupressina Sarcoscypha_austriaca_NY Sarcoscypha_austriaca_Norway Sarcoscypha_austriaca_Slovakia Sarcoscypha_coccinea_CA Sarcoscypha_coccinea_OR Sarcoscypha_coccinea_WA Sarcoscypha_dudleyi_FL Sarcoscypha_dudleyi_NY Sarcoscypha_emarginata_Luxembou Sarcoscypha_emarginata_Switzerl Sarcoscypha_javensis Sarcoscypha_macaronesica_Gomera Sarcoscypha_macaronesica_Teneri Sarcoscypha_occidentalis_OH Sarcoscypha_occidentalis_PN Sarcoscypha_sp_A Sarcoscypha_sp_B Sarcoscypha_sp_C Sarcoscypha_sp_D Sarcoscypha_sp_E Sarcoscypha_striatispora Sarcoscypha_vassiljevae ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M662] TITLE unpublished; LINK TAXA = TaxonLabelSet9627; DIMENSIONS NCHAR=907; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=- GAP= "; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Pithya_cupressina AAGTCGTAACAAGGTTTCCGTAGGTGAA-CTGCGGAAGGATCATTA--AC-----------------------------------------------------------------------------------------------------------------------------------T--AAAA--------CA--A-CCGT--GGTCATCCC---------------TTC-------------A--CC-GGGG-------------------TGCG----------------------------------------C-CT--------------CGTCC--TGTT---------------TCAACCCTCTGTGTACCAATACCTCTGTTGCTTCCCGTCC-GAGCTTCGGC-CCGCGGCGGGAAGGTCTACCGAAACTCTT-TTGTCTTA-ATGCAGTCTGTAGATGGCGGCTAGTCCGCAAAAAATTAAAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTCCGAGCGTCGTCAAACCCCCCTCAAGC-TGCTTTTGCT---GC-TTGGTCTTGGCCGAAGA--T-CGC-T-GCCCCTCGGGG-AGGCGTTCCCGGCTGAAAGGGATCTGGCGGAGAGCCTGGTCTCCACGGATGTAGTAAGC-TTATGCCTA-TCTTCTGTGTGTGCGA-CCAGTTATCCAGCCGTCA-A-CC-TC--AA-TTTTTC-ATGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAA Sarcoscypha_austriaca_NY AAGTCGTAACAAGGTTTCCGTAGGTGAA-CTGCGGAAGGATCATTA---A-----------------------------------------------------------------------------------------------------------------------------------AAAAGGA--------GC--G-TGGC--GGGG---GG---------------AGG-------------A-CCC-CCGG-------------------CGCT----------------------------------------G--G--------------CTT-------T---------------CAAACCCTCTGTGTACC-TTACCTCTGTTGCTT-CCG-CC-G-GGTTCGCG---CCGGCGGGGAGGTCCACA-AAACCCAT-G-TTTACC-TTGCAGTCAGTA-AAAGCGGCTCGTCCG-CGAAAATTAAAAGTTAAAACTTTCAACAACGGATCTGTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTCCGAGCGTCGTCAAA-CCCCCTCAAGC-T-CCTTT------GC-TTGGTCATGGCGGAAGA--T-CCC-C-TCCCC----GG-A-GGGTTCCCCGCTCAAAGGGATCTGGCGTGCGGACCCGTACTCGCAGACGTAGTAAG---CAATTCTA-TCGTCCGC-CGGGCTC-GGG-CCGCCCCGCCGACG-A-AC-CC--AC-ATCTTCTAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAA Sarcoscypha_austriaca_Norway AAGTCGTAACAAGGTTTCCGTAGGTGAA-CTGCGGAAGGATCATTA---A-----------------------------------------------------------------------------------------------------------------------------------AAAAGGA--------GC--G-TGGC--GGGG---GG---------------AGG-------------A-CCC-CCGG-------------------CGCT----------------------------------------G--G--------------CTT-------T---------------CAAACCCTCTGTGTACC-TTACCTCTGTTGCTTCCCG-CC-G-GGTTCGCG---CC-GCCGGGAGGTCCACA-AAACCCAT-G-TTTTCC-TTGCAGTCAGTA-AAAGCGGCTCGTCCG-CGATAATTAAAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTCCGAGCGTCGT-AAA-CCCCCTCAAGC-T-CCTTT------GC-TTGGTCATGGCGGAAGA--T-CCC-C-TCCCC----GG-AGGGGTTCCCCGCTCAAAGGGATCTGGCGTGCGGACCCGTACTCGCAGACGTAGTAAG---CAATTCTA-TCGTCCGC-CGGGCTC-GGG-CCGCCCCGCCGACGCA-AC-CC--AC-ATCTTCTAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAA Sarcoscypha_austriaca_Slovakia AAGTCGTAACAAGGTTTCCGTAGGTGAA-CTGCGGAAGGATCATTA---A-----------------------------------------------------------------------------------------------------------------------------------AAAAGGA--------GC--G-TGGC--GGGG---GG---------------AGG-------------A-CCC-CCGG-------------------CGCT----------------------------------------G--G--------------CTT-------T---------------CAAACCCTCTGTGTACC-TTACCTCTGTTGCTTACCG-CC-G-GGTTCGCG--CCCGGCGGGGAGGTCCACA-AAACCCAT-G-TTTTCC-TTGCAGTCAGTA-AAAGCGGCTCGTCCG-CGAAAATTAAAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTCCGAGCGTCGTCAAA-CCCCCTCAAGC-T-CCTTT------GC-TTGGTCATGGCGGAAGA--T-CCC-C-TCCCC----GG---G-GTTCCCCGCTCAAAGGGATCTGGCGTGCGGACCCGTACTCGCAGACGTAGTAAG---CAATTCTA-TCGTCCGC-CGGGCTC-GGG-CCGCCCCGCCGACGCA-AC-CC--AC-ATCTTCTAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAA Sarcoscypha_coccinea_CA AAGTCGTAA-AAGGTTTCCGTAGGTGAA-CTGCGGAAGGATCATTA---C-----------------------------------------------------------------------------------------------------------------------------------CGAGAAA--------TT--T-TACG--GAGG---GG---------------AGG-------------A-CCCTCCGG-------------------CG-T----------------------------------------G--A--------------CTTA------C---------------CAAACCCTCTGTGTACC-TTACCTTTGTTGCTT-CCG-CC-G-GGTTCGCG---CCGGCGGGGAGGTCCACA-AAACTCAT-G-TTTTCC-TTGCAGTCAGTA-AAAGCGGTTTGTCCG-CGAAAATTAAAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTCCGAGCGTCGT-AAA-CCCCCTCAAGC-T-CCTTT------GCATTGGTCATGGCGGAAGA--T--GC-C-TCCTC----GG-AGGCGTTCTCCGCTCAAAGGGATCTGGCGTACGGACCCGTACTCGCAGACGTAGTAAG---CAATTCTA-TCGTCTGT-CGGGCTC-GGG-CCGCTCCGCCGACACA-AC-CCACAT-TTTTTCTAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAA Sarcoscypha_coccinea_OR AAGTCGTAACAAGGTTTCCGTAGGTGAA-CTGCGGAAGGATCATTA---C-----------------------------------------------------------------------------------------------------------------------------------CGAGAAA--------GC-GC-GC-G--GAGG---GG---------------AGG-------------A-CCCTCCGG-------------------CGCT----------------------------------------G--A--------------CTTA------C---------------CAAACCCTCTGTGTACC-TTACCTTTGTTGCTTCCCG-CC-G-GGTTCGCG--CCCGGCGGGGAGGTCCACA-AAACTCAT-G-TTTTCC-TTGCAGTCAGTA-AAAGCGGTTTGTCCG-CGAAAATTAAAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTCCGAGCGTCGTCAAA-CCCCCTCAAGC-T-CCTTT------GC-TTGGTCATGGCGGAAGA--T-CGC-C-TCCTC----GG-AGGCGTTCTCCGCTCAAAGGGATCTGGCGTGCGGACCCGTACTCGCAGACGTAGTAAG---CAATTCTA-TCGTCTGT-CGGGCTC-GGG-CCGCTCCGCCGACACA-AC-CCACAT-TTTTTCTAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAA Sarcoscypha_coccinea_WA AAGTCGTAACAAGGTTTCCGTAGGTGAA-CTGCGGAAGGATCATTA---C-----------------------------------------------------------------------------------------------------------------------------------CGAGAAA---------------CCG--GAGG---GG---------------AGG-------------A-CCCTCCGG-------------------CGCT----------------------------------------G--A--------------CTTA------C---------------CAAACCCTCTGTGTACC-TTACCTTTGTTGCTT-CCG-CC-G-GGTTCGCG--ACCGAGAG--AGGTCCACA-AAACTCAT-G-TTTTCC-TTGCAGTCAGTA-AAAGCGGTTTGTCCG-CGAAAATTAAAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTCCGAGCGTCGTCAAA-CCCCCTCAAGC-T-CCTTT------GC-TTGGTCATGGCGGAAGA--T-CGC-C-TCCTC----GG-AGGCGTTCTCC-CTCAAAGGGATCTGGCGTGCGGACCCGTACTCGCAGACGTAGTAAG---CAATTCTA-TCGTCTGT-CGGGCTC-GGG-CCG-TCCGCCGACACA-AC-CCACAT-TTTTTCTAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAA Sarcoscypha_dudleyi_FL AAGTCGTAACAAGGTTTCCGTAGGTGAA-CTGCGGAAGGATCATTA---C-----------------------------------------------------------------------------------------------------------------------------------CAAGGAA--------AA-GG-GGCC--GGGG---CC---------------TCG-------------G--CC-GGGG-------------------CG-T----------------------------------------G--A--------------CTTA------C---------------CAAACCCTCTGTGTACCTTTACCTTTGTTGCTTGCCG-TC-G-GGTTTGCG--CCCGGCGGGGAGGTCCACC-AAACTCAT-GTTTTTCC-ATGCAGTCAGTT-AGAGCGGCTCGTCCG-CGAAATTTAAAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCGTCAAA-CCCCCTCAAGC-T-CCTTT------GC-TTGGTCATGGCGGAAGA--T-CCC-C-TCCCC----GG-AGGGGTTCCCCGCTTAAAGGAATCTGGCGGAGAGCCTGGTCCTCGGAGACGTAGTAAG---CAATTCTA-TCGTCTCT-CGAGCGA-TCA-TCTCCCAGCCGACA-A-CC-CCA-AA-CTTTTCTAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAA Sarcoscypha_dudleyi_NY AAGTCGTAACAAGGTTTCCGTAGGTGAA-CTGCGGAAGGATCATTA---C-----------------------------------------------------------------------------------------------------------------------------------CAAGGAA--------AA-GG-GGCC--GGGG---CC---------------TCG-------------G--CC-GGGG--------------------G---------------------------------------------A--------------CTTA------C---------------CAAACCCTCTGTGTACCTTTACCTTTGTTGCTTCCCG--T-C-GGTTTGCG--CCCGGCGGGGAGGTCCACC-AAACTCAT-GTTTTTCC-ATGCAGTCAGTA--GAGCGGCTCGTCCG-CGAAATTTAAAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCGTCAAA-CCCCCTCAAGC-T-CCTTT------GC-TTGGTCATGGTGGAAGA--A-CCC-C-TCCCC----GG-AGGGTATCCCCGCTTAAAGGAATCTGGCGGAGAGCCTGGTCCTCGGAGACGTAGTAAG---CAATTCTA-TCGTCTCT-CGAGCGA-TCA-TCTCCCAGCCGACA-A-CC-CCA-AA-CTTTTCTAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAA Sarcoscypha_emarginata_Luxembou AAGTCGTAACAAGGTTTCCGTAGGTGAA-CTGCGGAAGGATCATTA---C-----------------------------------------------------------------------------------------------------------------------------------C--GAGA--------AA-GC-GCCC--GGGG---TC---------------TCG-------------G-CCC-TGAG-------------------CGCT----------------------------------------G--A--------------CTTA------C---------------CAAACCCTCTGTGTACCTTTACCTTTGTTGCTTCCCGCTC-G-GGTTCGCG-CCCTGGCGGGGAGGTCCACC-AAACTCAT-GTTTTTCC-ATGCAGTCAGTA-AGAGCGGCTCGTCCG-CGAAATTTAAAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTTCGAACGTCGTCAAACCCCCCTCAAGC-T-CCTTT------GC-TTGGTCATGGCGGAAGA--T-CCC-C-TCCTC----GG-AGGGGTTCCCCG-GCAAAGGAATCTGGCGGAGAGCCTGGTCCTTGGAGACGTAGTACG--TCAATTCTA-TCGTCTCT-CGAGTGA-CCA-TCTCCCAGCCGACA-A-CC-CCA-AACATTTTCTAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAA Sarcoscypha_emarginata_Switzerl AAGTCGTAACAAGGTTTCCGTAGGTGAA-CTGCGGAAGGATCATTA---C-----------------------------------------------------------------------------------------------------------------------------------C--GAGA--------AA-GC-GCCC--GGGG---TC---------------TCG-------------G-CCC-TGAG-------------------CGCT----------------------------------------G--A--------------CTTA------C---------------CAAACCCTCTGTGTACCTTTACCTTTGTTGCTTCCCGCTC-G-GGTTCGCG-CCCTGGCGGGGAGGTCCACC-AAACTCAT-GTTTTTCC-ATGCAGTCAGTA-AGAGCGGCTCGTCCG-GGAAATTTAAAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCGTCAAA-CCCCCTCAAGC-T-CCTTT------GC-TTGGTCATGGCGGAAGA--T-CCC-C-TCCCC----GG-AGG-GTTCCCCGCCCAAAGGAATCTGGCGGAGAGCCTGGTCCTCGGAGACGTAGTACG--TCAATTCTA-TCGTCTCT-CGAGTGA-CCA-TCTCCCAGCCGACA-A-CC-CCA-AACATTTTCTAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAA Sarcoscypha_javensis AAGTCGTAACAAGGTTTCCGTAGGTGAA-CTGCGGAAGGATCATTAGTAG-----------------------------------------------------------------------------------------------------------------------------------TAAACGC--------CA-GG-GGCCA-GGGG---TC---------------TCG-------------G-CCC-CTCG-------------------GGCT----------------------------------------AACG--------------CTTA------C---------------CAAACCCTCTGAGTACCTTTACCTTTGTTGCTTGCCG-TC-G-GGTTCGCG--CCCGGCGGGGAGGTCCACC-AAACTCAT-GTTTTTCC-ATGCAGTCAGTT-AGAGCGGCTCGTCCGCGAAAATTTAAAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCGTCAAA-CCCCCTCAAGC-T--TCTT------GC-TTGGTCATGGCGGAAGA--T-CCC-T-CCCCC----GG-AGGAGTTCCCCGCCCAAAGGAATCTGGCGGAGAGCCTGGTCCTCGGAGACGTAGTAAG---CAATTCTA-TCGTCTGT-TGAGCGA-TCCGTTATCCAGCCGACA-A-CC-CCA-AA-CTTTTCTAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAA Sarcoscypha_macaronesica_Gomera AAGTCGTAACAAGGTTTCCGTAGGTGAA-CTGCGGAAGGATCATTA---C-----------------------------------------------------------------------------------------------------------------------------------CGAGAGA--------GCAGCAGCAG--GAGG---GG---------------AGG-------------A-CCCTCCGG-------------------CGCT----------------------------------------G--G--------------CTTA------C---------------CAAACCCTCTGTGTACC-TTACCTTTGTTGCTTCCCG-CT-G-GGTTCGCG---CCGGCGGGGAGGTCCACA-AAACTCAT-G-TTTTCC-TTGCAGTCAGTA-AAAGCGGTTCGTCCG-CGAAAATTAAAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTCCGAGCGTCGTCAAA-CCCCCTCAAGC-T-CCTTT------GC-TTGGTCATGGTGGAAGA--T--GC-C-TCCCC----GG-A-GCGTTCCCCGCTCAAAGGGATCTGGCGTGCGGACCCGTACTCGCAGACGTAGTAAG---CAATTCTA-TCGTTTGC-CGGGCTC-GGG-CCGCTCCGCCGACGCA-AC-CCACAT-TTTTTCTAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAA Sarcoscypha_macaronesica_Teneri AAGTCGTAACAAGGTTTCCGTAGGTGAA-CTGCGGAAGGATCATTA---C-----------------------------------------------------------------------------------------------------------------------------------CGAGATA--------TC--T-GCAC--GAGG---GG---------------AGG-------------A-CCCTCCGT-------------------CT-T----------------------------------------G--G--------------CTTA------C---------------CAAACCCTCTGTGTACC-TTACCTTTGTTGCTTCCCG-CT-G-GGTTCGCG---CCGGCGGGGAGGTCCACA-AAACTCAT-G-TTTTCC-TTGCAGTCAGTA-AAAGCGGTTCGTCCG-CGAAAATTAAAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTCCGAGCGTCGTCAAA-CCCCCTCAAGC-T-CCTTT------GC-TTGGTCATGGTGGAAGA--T--CG-C-TCCCC----GG-A-GCGTTCCCCGCTCAAAGGGATCTGGCGTGCGGACCCGTACTCGCAGACGTAGTAAG---CAATTCTA-TCGTTTGC-CGGGCTC-GGG-CCGCTCCGCCGACGCA-AC-CCACAT-TTTTTCTAGGTTGACCT-GGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAA Sarcoscypha_occidentalis_OH AAGTCGTAACAAGGTTTCCGTAGGTGAA-CTGCGGAAGGATCATTA--AC-----------------------------------------------------------------------------------------------------------------------------------C--GAAC--------CT--G-GCGCTCGGGTT-GGG---------------ACC-------------A--CG-CCGG-------------------CCCG----------------------------------------GATG--------------CTAAGTTTTTC---------------CAAACCCTCTGTGTACCTTTACCTTTGTTGCTTACCG-CC-G-GGTTTGCG--CCCGGCGGGGAGGTCTACC-AAACTCATGTTTTTTCC-ATGCAGTCAGTT-AGAGCGGCTCGTCCGCGAATATCTAAAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTCCGAGCGTCGTCAAA-CCCCCTCAAGC-T-CTTTT------GC-TTGGTCATGGCGGAAGA--T-CCC-C-TCCCC---GGG-AGGAGTTCCCCGTCCAAAGGAATCTGGCGGAGAGCCTGGTCCTCGGAGACGTAGTGAG---CAATTCTA-TCGTCTGT-TGAGCGA-TCAGTTATCCAGCC-ACA-A-AC-CCA-AA-CTTTTCTAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAA Sarcoscypha_occidentalis_PN AAGTCGTAACAAGGTTTCTGTAGGTGAA-CTGCGGAAGGATCATTA--AC-----------------------------------------------------------------------------------------------------------------------------------C--GAAC--------C{AGT}--G-GCGC-CCGGTT-GGG---------------ACC-------------ACCTC-CCGG-------------------CCCG----------------------------------------GATG--------------CTAAG-TTTTC---------------CAAACCCTCTGTGTACCTTTACCTTTGTTGCTT-CCG-CC-G-GGTTTGCG---CC--CGGGGAGGTCTACC-AAACTCATGTTTTTTCC-ATGCAGTCAGTT-AGAGCGGCTCGTCCG-CGATATCTAAAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTCCGAGCGTCGTCAAA-CCCCCTCAAGC-T-CTTTT------GC-TTGGTCATGGCGGAAGA--T-CCC-C-TCCCC-C-GGG-AGGAGTTCCCCGTCCAAAGGAATCTGGCGGAGAGCCTGGTCCTCGGAGACGTAGTGAG---CAATTCTA-TCGTCTGT-TGAGCGA-TCAGTTATCCAGCCGACA-A-CC-CCA-AA-CTTTTCTAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCGTATCAATAA Sarcoscypha_sp_A AAGTCGTAACAAGGTTTCCGTAGGTGAA-CTGCGGAAGGATCATTA--AGGA--------------------------------------------------------------------------------------------------ACGCCAGG-----------------CGCCGGGGACCTCCCGG--GATT--CCAGCC-GGGGTTTGTAG------------GAACC---CCGGG---AATCCCGTCGGG--GCTGAGA---GACGCCCCGTC-------GGGGTG-ACCG-------GGAC--------CCCC--GC--------CGCT-AAACC-----T------------TC-CAAACCCTCTGTGTACCCCTACCTTTGTTGCTTCCC----------GC-CG---G---CGGGGAGGTCCACA-AAACTCAT-G-TTTTCC-TTGCAGTCAGTA-AAAGCGGCTCGTCCG-CG-AAAATTAAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCGTCAAA-CCCCCTCAAGC-T-CCTTT------GC-TTGGTCATGGCGGAAGA--T-CCC-C-TCCCC----GG-AGGGTTTCTCCGCTCAAAGGGATCTGGCGTGCGGACCCGTACTCGCAGACGTAGTAAG---CAATTCTA-TCGTTCGT-CGAGCCC-GGG-CCGCCCCGCCGACACA-AC-CC--AC-ATCTTCTAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAA Sarcoscypha_sp_B AAGTCGTAACAAGGTTTCCGTAGGTGAA-CTGCGGAAGGATCATTA---A-----------------------------------------------------------------------------------------------------------------------------------AAAAGGA--------GC--G-TGGC--GGGG---GG---------------AGG-------------A-CCC-CCGG-------------------CGCT----------------------------------------G--G--------------CTT-------T---------------CAAACCCTCTGTGTACC-TTACCTCTGTTGCTTCCCG-TC-A-GGTTCGCG--CCCGGCGGGGAGGTCCACA-AAACCCAT-G-TTTTCC-TTGCAGTCAGTA-AAAGCGGCTCGTCCG--G-AAATTAAAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTCCGAGCGTCGTCAAA-CCCCCTCAAGC-T-CCTTT------GC-TTGGTCATGGCGGAAGT--A-CCC-C-T-CCC----GG-AGGGGTTCCCCGCTCAAAGGGATCTGGCGTGCGGACCCGTACTCGCGGACGTAGTAAG---CAATTCTA-TCGTCCGT-TGGGCTC-GGG-CCGCCCCGCCGACGCA-AC-CC--AC-ATCTTCTAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAA Sarcoscypha_sp_C AAGTCGTAACAAGGTTTCCGTAGGTGAA-CTGCGGAAGGATCATTA---C-----------------------------------------------------------------------------------------------------------------------------------C--GAGA--------AA-GC-GCCC--GGGG---TC---------------TCG-------------G-CCT-CGGG-------------------CGCT----------------------------------------G--A--------------CTTA------C---------------CAAACCCTCTGTGTACCCTTACCTTTGTTGCTTCCCG-CC-G-GGTGCAAA---CCGTCGGGGAGGTCCACC-AAACTCAT-GTTTTTCC-ATGCAGTCAGTT-AGAGCGGCTCGTCCGCGAAAATATAAAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCGTCAAA-CCCCCTCAAGC-T-CTTCT------GC-TTGGTCATGGCGGAAGA--T--CC-C-TCCCC----GG-AGGAGTTCCCCGCCCAAAGGAATCTGGCGGAGAGCCTGGTCCTCAGAGACGTAGTAAG---CAATTCTA-TCGTCTGT-TGAGCGA-TCTGTTATCCAGCCGACA-A-CA-CCA-AA-CTTTTCTAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAA Sarcoscypha_sp_D AAGTCGTAACAAGGTTTCCGTAGGTGAA-CTGCGGAAGGATCATTA---C-----------------------------------------------------------------------------------------------------------------------------------C--GAGA--------AA-GC-GCCC--GGGG---CC---------------TCG-------------G-CCC-GGGG-------------------CGCT----------------------------------------G--A--------------CTTA------C---------------CAAACCCTCTGTGTACCTTTACCTTTGTTGCTTCCCG-CC-GCGGTTCGCG---CCGGCGGGGAGGTCCACC-AAACTCAT-GTTTTTCC-ATGCAGTCAGTT-AGAGCGGCTCGTCCGCGAAAATTTAAAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCGTCAAA-CCCCCTCAAGC-T-CTTTT------GC-TTGGTCATGGCGGAAGA--T-TCC-C-TCCCC----GG-AGGGGTTCCCCGCCCAAAGGAATCTGGCGGAGAGCCTGGTCCTCGGAGACGTAGTAAG---CAATTCTA-TCGTCTGT-CGAGCGA-TCA-TCTCCCAGCCGACA-A-CC-CCA-AA-CTTTTCTAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAA Sarcoscypha_sp_E AAGTCGTAACAAGGTTTCCGTAGGTGAA-CTGCGGAAGGATCATTAG-AG-----------------------------------------------------------------------------------------------------------------------------------TAAACGC--------CA-GG-CGCCA-GGGG---TC---------------TCG-------------G-CCC-CTCG-------------------CGCT----------------------------------------AACA--------------CTTA------C---------------CAAACCCTCTGTGTACCTTTACCTTTGTTGCTTCCCG-CC-G-GGTTTGCG--CCCGGCGGGGAGGTCCACC-AAACTCAT-GTTTTTCC-ATGCAGTCAGTT-AGAGCGGTTCGTCCGCGAAAATTCAAAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCGTCAAA-CCCCCTCAAGC-T-CTTTT------GC-TTGGTCATGGCGGAAGACCT-CCC-C-TCCTC----GG-AGGAGTTCCCCGCCCAAAGGAATCTGGCGGAGAGCCTGGTCCTCGGAGACGTAGTAAG---CAATTCTA-TCGTCTGT-CGAGTGA-TCCGTTATCCAGCCGACA-ACCC-CCA-AA-CTTTTCTAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAA Sarcoscypha_striatispora AAGTCGTAACAAGGTTTCCGTAGGTGAA-CTGCGGAAGGATCATTA--AA-----------------------------------------------------------------------------------------------------------------------------------AAAAATC--------CG-GC-GGCTT-GAGC---CA---------------AGC-------------G-CTC-CTGC-------------------TGCC----------------------------------------CA-G--------------ATT-------T---------------TAAACCCTCTGTGTACCTTTACCTTTGTTGCTTCCCGTCCGGC-C-TTGTG-CCG-GGCGGGGAGGTCTACCTAAACTCCT-G-TATTCT-TTGCAGTCAGTT-TGAGCGGCTCGTCCC--AAAATCTAAAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTCCGAGCGTTAT-TAA-ACCCCTCAAGC-A-ATATTTCT--TGC-TTGGTATTGGCAGAAGA--T-TGC-C-T-AGC----GG---C-ATTCTCTGCCGAAATTGATCTGGCGGAGAGCCTGGTCTTAGTTGACGTAGTAAG-TTAATTCCTA-TCGTCTTC-TCAGTCA-CCAGTTATCTAGCCGTGA-A-CC-TG--TA-TTTTTCAGGATTTTCCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAA Sarcoscypha_vassiljevae AAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTA--CCGATTCGTAGCGCGCGAACCCAGCGAGTCAGCGTGTGGGGAGCATGCAACTCTTATGGCAAGAACCGTCCGACACCTCTCTTGGTATGCGTCCGTGCTGGGAGGCCGGGATTAAATTCCCGAGACCTGGCGTGGAGCTTCCGGATGAGC--TCGGCG-GCCGCATGTGGCACTGGTCCCAACACCCTGTCCGGGTGCACCGCCCTGGGGCGTCTGAAATTTGTTGTCCGGTCTACGGCGCGGTTGTACCGACATCCCGGACAGGATTGGCCCG--TCTGTTGGTTCGCTGGGACC-----TCCCGAGCTCAAATCACACACCCTCTGTGTA-C-TTACCTTGGTTGCTTCCCG-CCGGT-CTTCGGG--TC-GGCGGGGAGGTCCCTC-AAACTCCGGTTTTTTCCTTTGCAGTCAGAT--CAGCGGTTCGTCCGCGAATTTATTAAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATGACA-TCACCTCAAGC-A-CCTTT-CT---GC-TTGGTCATGGCGGAAGG--T--TC-C-C-CGA----GA--GGGGTCCTCCGCTCAAAAGGATCTGGCGGACAGCCTGGTCTTCACAGACGTAGTACG-GTCACACCTACCCGTCTGG-CGAGACATTTGGCCGCTCAGCCGTCA-ACCCGTC-TAGCTTTTGGAAGTTGGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAA ; END;