Matrix 6884 of Study 1404
Matrices
Title: ITSchar
Rows
Taxon Label | Row Segments | Characters 1?–30 |
---|---|---|
Phoma sclerotioides var champlainii Chz1x7R | (none) | GGTTT---CAATTG-TTCT-TCGG-----T |
Phoma sclerotioides var sclerotioides Chz2x14Cr | (none) | GGTTTTT-CAGCGG-TGCT-TTTG-----T |
Phoma sclerotioides var macrospora Chz7x25Cr | (none) | GGTTT---CAAT-----------------T |
Phoma sclerotioides var sclerotioides Chz8x12R | (none) | GGTTTT--CAGCGG-TGCT-TTTG-----T |
Phoma sclerotioides var steubenii Chz10x18R | (none) | GGTTT---CAATT----------------- |
Phoma sclerotioides var viridis Chz17x19cr | (none) | GGTTTC--AGCCGG-TGCT-TCGG-----C |
Phoma sclerotioides var viridis Chz21x19Cr | (none) | GGTTT---CAGCCGGTGCT-TCGG-----C |
Phoma sclerotioides var champlainii Vt3x2x1x7r | (none) | GGTTT---CAATTG-TTCT-TCGG-----T |
Phoma sclerotioides var macrospora ME5x2x5R | (none) | GGTTT---CAATT----------------- |
Phoma sclerotioides var steubenii ME1x3x11lf | (none) | GGTTT---CAATT----------------- |
Phoma sclerotioides var steubenii ME3x4x16cr | (none) | GGTTT---CAATT----------------- |
Phoma sclerotioides var obscurus CO7x2x10a | (none) | GGTTT---CAGCGG-TGCT-TCGG-----T |
Phoma sclerotioides var obscurus MT1x4x2 | (none) | GGTTT---CAGCGG-TGCT-TCGG-----T |
Phoma sclerotioides var saskatchewanii MT2x1x3 | (none) | GGTTT---CAATT----------------- |
Phoma sclerotioides var obscurus MT2x1x4 | (none) | GGTTT---CAGCGG-TGCT-TCGG-----T |
Phoma sclerotioides var sclerotioides MT3x2x9 | (none) | GGTTT---CAATTG-TTCT-TCGG-----T |
Phoma sclerotioides var macrospora ON4x24 | (none) | GGTTT---CAATT----------------- |
Phoma sclerotioides var sclerotioides SK7x8 | (none) | GGTTTT--CAGCGG-TGCT-TTTG-----T |
Phoma sclerotioides var sclerotioides SK2x11 | (none) | GGTTTT--CAGCGG-TGCT-TTTG-----T |
Phoma sclerotioides var sclerotioides SK6x2 | (none) | GGTTTT--CAGCGG-TGCT-TTTG-----T |
Phoma sclerotioides var sclerotioides SK6x7 | (none) | GGTTTT--CAGCGG-TGCT-TTTG-----T |
Phoma sclerotioides SK7x12 | (none) | GGTTT---CAATTG-TTCT-TCGG-----T |
Phoma sclerotioides var macrospora Wyo18x1r | (none) | GGTTT---CAATT----------------- |
Phoma sclerotioides var saskatchewanii SK2x2 | (none) | GGTTT---CAATT----------------- |
Phoma sclerotioides var saskatchewanii SK7x34 | (none) | GGTTT---CAATT----------------- |
Saccharomyces cerevisiae AB018043 | (none) | GACAATTAAAACCGTTTCAATACAACACAC |
Leptosphaeria doliolum U04207 | (none) | GGAGTT--CAGCAG------TGTA-----T |
Leptosphaeria bellynckii AF439458 | (none) | GGGAGTGGAAACTGAGCGG-GCTTGC---- |
Leptosphaeria dryadis AF439461 | (none) | GGATCCAGACTGTAGAGCT-TCGGCCCTGC |
Leptosphaeria typharum AF439465 | (none) | AAGAGCACTATGCTCTGTC-TATGGCAGAG |
Phaeosphaeria eustoma AF439480 | (none) | GGGGCTGTTAGTCTGTATA-GCGCAA--GC |
Phaeosphaeria lycopodina AF439491 | (none) | GGTGCTGTAAGTCCGCATA-GTTTAATTAC |
Phaeosphaeria pontiformis AF439499 | (none) | GGGGCTGTTAGTCTGTATA-GCTTCACGGC |
Phaeosphaeria volkartiana AF439509 | (none) | GTCGCTATAAGTCCGCATA-GTTTAATTAC |
Phaeosphaeria nodorum AF439493 | (none) | GAGGCTGTTAGTCTGTATA-GCGCAA--GC |
Phaeosphaeria oreochloae AF439494 | (none) | ??CATT---AATTTCGGTG-GTTTTCC-TC |
Phaeosphaeria padellana AF439496 | (none) | ??CATT---AATTTCGGTG-GTTTTCC-AC |
Leptosphaeria weimeri AF439466 | (none) | GGCTCT-----------TG---TTGC--AC |
Phaeosphaeria spartinae AF439506 | (none) | TTCAGCGGTAATAGCACTA-ATTA---TAC |
Phoma betae AY531685 | (none) | GGCTCT---AACT----------------- |
Phoma wasabiae U19274 | (none) | GGTGTCAGCATTTCGGCCT-TTGG-CTTAC |
Leptosphaeria biglobosa subsp brassicae AJ550862 | (none) | GGTGTCAGCAGTTGAGCCT-TTGG-CTTAA |
Leptosphaeria congesta AF439460 | (none) | GGCGTTGTTAGTAGGGCTC-TTGCCCCACG |
Phoma wasabiae L38711 | (none) | GGTGTCAGCATTTCGGCCT-TTGG-CTTAC |
Leptosphaeria biglobosa subsp australiensis AJ550870 | (none) | GGTGTTGGTATTTCAGGCT-TCGG-CTTGT |
Leptosphaeria biglobosa subsp brassicae AJ550863 | (none) | GGTGTCAGCAGTTGAGCCT-TTGG-CTTAA |
Leptosphaeria biglobosa subsp canadensis AJ550867 | (none) | GGTGTCAGGATTTCGGCCT-TTGG-CTTAC |
Leptosphaeria biglobosa subsp erysimi AJ550872 | (none) | GGCGTTGGTATTTCAGGCT-CCGGGCTTGT |
Leptosphaeria biglobosa subsp thlaspii AJ550891 | (none) | GGTGTCAGCGTTCTAGGCG-TTAGTCTTGC |
Leptosphaeria biglobosa subsp australiensis AJ550871 | (none) | GGTGTTGGTATTTCAGGCT-TCGG-CTTGT |
Leptosphaeria conferta AF439459 | (none) | GGTTCCAGGGCTCAGGGCT-TATTGCTCTG |
Leptosphaeria biglobosa subsp thlaspii AJ550892 | (none) | GGTGCCAGCGTTCGAGGCG-TAAGCCTTGC |
Leptosphaeria maculans subsp brassicae AJ550873 | (none) | GCCG----------CCTCG-ATCA------ |
Leptosphaeria maculans subsp brassicae AJ550875 | (none) | GCCG----------CCTCG-ATCA------ |
Leptosphaeria maculans subsp brassicae AJ550881 | (none) | GCCG----------CCTCG-ATCA------ |
Leptosphaeria maculans subsp brassicae AJ550882 | (none) | GCCG----------CCTCG-ATCA------ |
Leptosphaeria maculans subsp brassicae AJ550885 | (none) | GCCG----------CCTCG-ATCA------ |
Leptosphaeria maculans subsp brassicae AJ550888 | (none) | GCCG----------CCTCG-ATCA------ |
Leptosphaeria maculans subsp brassicae AJ550883 | (none) | GCCG----------CCTCG-ATCA------ |
Leptosphaeria maculans subsp lepidii AJ550890 | (none) | GCTGTTG-------CCTTA-ACCA------ |
Phoma tracheiphila AY531674 | (none) | GGCGCCAGCCTTCGGGGCT-CTTGCTTCGC |
Phoma tracheiphila AY531689 | (none) | GGCGCCA?CCTTCGGGGCT-CTTGCTTCGC |
Phoma medicaginis Pmed1NY | (none) | GGAAGGATC-ATTACC-TA-GAGT------ |
Phoma medicaginis Pmed5 | (none) | GGAAGGATC-ATTACC-TA-GAGT------ |
Mycosphaerella zeae maydis FJ427086 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma americana FJ426979 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma boeremae FJ426982 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma calidophila FJ427059 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma calidophila FJ427060 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma calorpreferens FJ426983 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma clematidina FJ426988 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma coffeae arabicae FJ426993 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma complanata FJ515608 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma eupyrena FJ426999 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma exigua var exigua FJ427001 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma foveata EU573021 | (none) | GGAAGGATC-ATTACC-TA-GAGT------ |
Phoma gardeniae FJ427002 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma gardeniae FJ427003 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma glaucii FJ515609 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma glomerata FJ427020 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma herbarum FJ427022 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma infossa FJ427024 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma jolyana FJ427026 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma microchlamydospora FJ427028 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma microchlamydospora FJ427029 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma multirostrata FJ427030 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma narcissi FJ427040 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma omnivirens FJ427042 | (none) | ??????ATC-ATTACC-TA-GAGTA----- |
Phoma omnivirens FJ427046 | (none) | ??????ATC-ATTACC-TA-GAGTA----- |
Phoma paspali FJ427048 | (none) | ??????ATC-ATTACC-GA-GAGT------ |
Phoma pimprina FJ427049 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma pimprina FJ427050 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma pinodella FJ427051 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma pinodella FJ427052 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma pinodella AY831556 | (none) | GGAAGGATC-ATTACC-TA-GAGT------ |
Phoma plurivora EU573018 | (none) | GGAAGGATC-ATTACC-TA-GAGT------ |
Phoma plurivora EU573019 | (none) | GGAAGGATC-ATTACC-TA-GAGT------ |
Phoma pomorum var circinata FJ427053 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma pomorum var circinata FJ427054 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma pomorum var pomorum FJ427057 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma sancta FJ427063 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma sojicola EU573026 | (none) | GGAAGGATC-ATTACC-TA-GAGT------ |
Phoma sojicola EU573023 | (none) | GGAAGGATC-ATTACC-TA-GAGT------ |
Phoma sorghina FJ427067 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma sorghina FJ427078 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma sorghina FJ427079 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma subglomerata FJ427080 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma zantedeschiae FJ427084 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Phoma zantedeschiae FJ427085 | (none) | ??????ATC-ATTACC-TA-GAGT------ |
Columns
None of the columns has a description.