#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 13, 2024; 20:15 GMT

TreeBASE (cc) 1994-2008

Study reference:
Mckenna M.J., Simmons M.P., Bacon C.D., & Lombardi J. 2010. Delimitation of the Segregate
Genera of Maytenus sensu lato (Celastraceae) Based on Morphological and
Molecular Characters. Systematic Botany, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S11610]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=32;
        TAXLABELS
            Allocassine_laurifolia
            Cassine_peragua
            Cassine_schinoides
            Catha_edulis_1896
            Catha_edulis_3016
            Gymnosporia_arbutifolia
            Gymnosporia_cassinoides_2201
            Gymnosporia_cassinoides_3525
            Gymnosporia_crenata
            Gymnosporia_divaricata
            Gymnosporia_diversifolia
            Gymnosporia_engleriana
            Gymnosporia_grossulariae
            Gymnosporia_harveyana
            Gymnosporia_inermis
            Gymnosporia_littoralis
            Gymnosporia_madagascariensis
            Gymnosporia_mossambicensis
            Gymnosporia_palauica
            Gymnosporia_polyacantha
            Gymnosporia_pyria
            Gymnosporia_royleana
            Gymnosporia_senegalensis
            Gymnosporia_wallichiana
            Lauridia_reticulata
            Lauridia_tetragona
            Lydenburgia_abbottii
            Lydenburgia_cassinoides
            Maurocenia_frangula
            Maytenus_pertinax
            Putterlickia_pyracantha
            Putterlickia_verrucosa
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M9116]

	TITLE Gymnosporia_Indels;
	LINK TAXA = Taxa;
	DIMENSIONS NCHAR=16;
	FORMAT DATATYPE=Standard SYMBOLS= "0 1 2 3 4" MISSING=? GAP= -;
	CHARSTATELABELS
		1  'ITS 68-9',
		2  'ITS 135-146',
		3  'ITS 247-8',
		4  ITS_462,
		5  ITS_465,
		6  'ITS 564-7',
		7  ITS_640,
		8  ITS_664,
		9  'uniC 238-256',
		10  uniC_274,
		11  'uniC 298-305',
		12  'uniC 375-380',
		13  uniE_109,
		14  'uniE 191-195',
		15  'uniE 319-323',
		16  'uniE 381-384',
		;

MATRIX
Allocassine_laurifolia           1110010011000123
Cassine_peragua                  1120020011310143
Cassine_schinoides               1010010011210103
Catha_edulis_1896                101001001021013?
Catha_edulis_3016                1010010010210133
Gymnosporia_arbutifolia          1110010011101111
Gymnosporia_cassinoides_2201     1110010031101110
Gymnosporia_cassinoides_3525     1110010031101110
Gymnosporia_crenata              1210000011101112
Gymnosporia_divaricata           112?010011101111
Gymnosporia_diversifolia         1110010011101122
Gymnosporia_engleriana           1110010011101111
Gymnosporia_grossulariae         0311011011101112
Gymnosporia_harveyana            11100101????????
Gymnosporia_inermis              2110010011101112
Gymnosporia_littoralis           1110010011101012
Gymnosporia_madagascariensis     0111011011101111
Gymnosporia_mossambicensis       1110010111101111
Gymnosporia_palauica             1110000011101111
Gymnosporia_polyacantha          ????????11101111
Gymnosporia_pyria                0110011011101111
Gymnosporia_royleana             1110010011101111
Gymnosporia_senegalensis         0110011011101111
Gymnosporia_wallichiana          1110010011101012
Lauridia_reticulata              1110010011210123
Lauridia_tetragona               1100010?11010123
Lydenburgia_abbottii             1110110021101112
Lydenburgia_cassinoides          1110110011101112
Maurocenia_frangula              1110010011310144
Maytenus_pertinax                1210000011101112
Putterlickia_pyracantha          01100100????????
Putterlickia_verrucosa           1110010011101120
;
END;