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Citation
Taxa
Matrices
Trees
Analyses
Matrix 959 of Study 1444
Citation title: "Molecular phylogeny of Hypoxylon and closely related genera".
This study was previously identified under the legacy study ID S1379
(Status: Published).
Matrices
Title: Tubulin Actin
Description: Legacy TreeBASE Matrix ID = M2453
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Xylaria berteri | (none) | AACATGCGTGAGATTGTAAGTG--CTCTTC |
| Xylaria bambusicola | (none) | AACATGCGTGAGATTGTAAGT----CTTTC |
| Hypoxylon vinosopulvinatum | (none) | AACATGCGTGAGATTGTAAGT-TGAT---- |
| Hypoxylon ulmophilum | (none) | AACATGCGTGAGATTGTAAGT----CTT-- |
| Hypoxylon trugodes 88113005 | (none) | AACATGCGTGAGATTGTAAGT--ATTATTT |
| Hypoxylon trugodes 57 | (none) | AACATGCGTGAGATTGTAAGT--ATTATTT |
| Hypoxylon ticinense | (none) | AACATGCGTGAGATTGTAAGT-CGATAT-- |
| Hypoxylon submonticulosum | (none) | AACATGCGTGAGATTGTAAGT--CATA--- |
| Hypoxylon subgilvum 88113007 | (none) | AACATGCGTGAGATTGTAAGT---ACA--- |
| Hypoxylon subgilvum 246 | (none) | AACATGCGTGAGATTGTAAGT---ACA--- |
| Hypoxylon shearii var minor | (none) | AACATGCGTGAGATTGTAAGT----CTTA- |
| Hypoxylon rutilum | (none) | AACATGCGTGAGATTGTAAGTCATACAAT- |
| Hypoxylon rubiginosum | (none) | AACATGCGTGAGATTGTAAGT----CTT-- |
| Hypoxylon rickii | (none) | AACATGCGTGAGATTGTAAGT-TGATAT-- |
| Hypoxylon polyporum | (none) | AACATGCGTGAGATTGTAAGT--AATAT-- |
| Hypoxylon polyporoideum 56 | (none) | AACATGCGTGAGATTGTAAGT-TGATAT-- |
| Hypoxylon polyporoideum 15 | (none) | AACATGCGTGAGATTGTAAGT-TGATAT-- |
| Hypoxylon placentiforme 51 | (none) | AACATGCGTGAGATTGTAAGT-AAATATC- |
| Hypoxylon placentiforme 16 | (none) | AACATGCGTGAGATTGTAAGTAATATATC- |
| Hypoxylon pilgerianum | (none) | AACATGCGTGAGATTGTAAGCA---CTTAA |
| Hypoxylon petriniae | (none) | AACATGCGTGAGATTGTAAGT----CGT-- |
| Hypoxylon perforatum 66 | (none) | AACATGCGTGAGATTGTAAGT----CTT-- |
| Hypoxylon perforatum 5 | (none) | AACATGCGTGAGATTGTAAGT----CTT-- |
| Hypoxylon perforatum 4 | (none) | AACATGCGTGAGATTGTAAGT----CTT-- |
| Hypoxylon notatum | (none) | AACATGCGTGAGATTGTAAGT----CTTA- |
| Hypoxylon munkii | (none) | AACATGCGTGAGATTGTAAGT----CATG- |
| Hypoxylon monticulosum | (none) | AACATGCGTGAGATTGTAAGT--CCTA--- |
| Hypoxylon macrosporum | (none) | AACATGCGTGAGATTGTAAGT----CTTA- |
| Hypoxylon lividipigmentum | (none) | AACATGCGTGAGATTGTAAGT--GATATAT |
| Hypoxylon lividicolor | (none) | AACATGCGTGAGATTGTAAGT--GATATTT |
| Hypoxylon lenormandii 92092009 | (none) | AACATGCGTGAGATTGTAAGT-CAACAT-- |
| Hypoxylon lenormandii 88113017 | (none) | AACATGCGTGAGATTGTAAGT-CAACAT-- |
| Hypoxylon jecorinum | (none) | AACATGCGTGAGATTGTAAGT-TGATAT-- |
| Hypoxylon investiens | (none) | AACATGCGTGAGATTGTAAGT-ATC-AT-- |
| Hypoxylon hypomiltum | (none) | AACATGCGTGAGATTGTAAGT----C-TA- |
| Hypoxylon howeianum | (none) | AACATGCGTGAGATTGTAAGT-CTATAT-- |
| Hypoxylon haematostroma 89091628 | (none) | AACATGCGTGAGATTGTAAGTGATGCATTA |
| Hypoxylon haematostroma 59 | (none) | AACATGCGTGAGATTGTAAGTGCTGCATTA |
| Hypoxylon haematostroma 14 | (none) | AACATGCGTGAGATTGTAAGTGATGCATTA |
| Hypoxylon fuscum 91010205 | (none) | AACATGCGTGAGATTGTAAGT----CATAT |
| Hypoxylon fuscum 23 | (none) | AACATGCGTGAGATTGTAAGT----CATC- |
| Hypoxylon fuscopurpureum | (none) | AACATGCGTGAGATTGTAAGTTTTATAT-- |
| Hypoxylon fragiforme 387 | (none) | AACATGCGTGAGATTGTAAGT-CAATAT-- |
| Hypoxylon fragiforme 383 | (none) | AACATGCGTGAGATTGTAAGT-CAATAT-- |
| Hypoxylon fendleri 92092016 | (none) | AACATGCGTGAGATTGTAAGT----CGC-- |
| Hypoxylon fendleri 2 | (none) | AACATGCGTGAGATTGTAAGT----TGC-- |
| Hypoxylon erythrostroma 90080602 | (none) | AACATGCGTGAGATTGTAAGT----TAT-- |
| Hypoxylon erythrostroma 81 | (none) | AACATGCGTGAGATTGTAAGT----TAT-- |
| Hypoxylon duranii | (none) | AACATGCGTGAGATTGTAAGT----CTTA- |
| Hypoxylon dieckmannii 89041203 | (none) | AACATGCGTGAGATTGTAAGT--GATAT-- |
| Hypoxylon dieckmannii 45 | (none) | AACATGCGTGAGATTGTAAGT--GATAT-- |
| Hypoxylon crocopeplum 7 | (none) | AACATGCGTGAGATTGTAAGT--AATAT-- |
| Hypoxylon crocopeplum 11 | (none) | AACATGCGTGAGATTGTAAGT--AATAT-- |
| Hypoxylon cinnabarinum 8 | (none) | AACATGCGTGAGATTGTAAGT-TGATAT-- |
| Hypoxylon cinnabarinum 43 | (none) | AACATGCGTGAGATTGTAAGT-TGATAT-- |
| Hypoxylon cercidicolum | (none) | AACATGCGTGAGATTGTAAGT----CTG-- |
| Hypoxylon carneum | (none) | AACATGCGTGAGATTGTAAGT----CTTT- |
| Hypoxylon brevisporum | (none) | AACATGCGTGAGATTGTAAGT--GATAA-- |
| Hypoxylon begae | (none) | AACATGCGTGAGATTGTAAGTTATCTAT-- |
| Hypoxylon anthochroum | (none) | AACATGCGTGAGATTGTAAGT-TGAT---- |
| Hadrotricum pyrenaicum | (none) | AACATGCGTGAGATTGTAAGT----CTG-- |
| Daldinia sp from Russian Far East 103 | (none) | AACATGCGTGAGATTGTAAGT--CATAT-- |
| Daldinia singularis | (none) | AACATGCGTGAGATTGTAAGT--CATAT-- |
| Daldinia petriniae | (none) | AACATGCGTGAGATTGTAAGT--CGTAT-- |
| Daldinia loculata | (none) | AACATGCGTGAGATTGTAAGT--CATAT-- |
| Daldinia fissa | (none) | AACATGCGTGAGATTGTAAGT--CATAT-- |
| Daldinia eschscholzii 264 | (none) | AACATGCGTGAGATTGTAAGT--GATATT- |
| Daldinia eschscholzii 101 | (none) | AACATGCGTGAGATTGTAAGT--GATATT- |
| Daldinia decipiens | (none) | AACATGCGTGAGATTGTAAGT--CATAT-- |
| Daldinia clavata | (none) | AACATGCGTGAGATTGTAAGT--CATAT-- |
| Daldinia childiae 91010202 | (none) | AACATGCGTGAGATTGTAAGT--TATAT-- |
| Daldinia childiae 252 | (none) | AACATGCGTGAGATTGTAAGT--TATAT-- |
| Daldinia caldariorum 263 | (none) | AACATGCGTGAGATTGTAAGT--CAT--C- |
| Daldinia caldariorum 104 | (none) | AACATGCGTGAGATTGTAAGT--CATATC- |
| Daldinia bambusicola | (none) | AACATGCGTGAGATTGTAAGT--CATATC- |
| Biscogniauxia uniapiculata | (none) | AACATGCGTGAGATTGTAAGT---GCAAC- |
| Biscogniauxia simplicior | (none) | AACATGCGTGAGATTGTAAGT---GCACC- |
| Biscogniauxia philippinensis var microspora | (none) | AACATGCGTGAGATTGTAAGT---GCAACA |
| Biscogniauxia mediterranea | (none) | AACATGCGTGAGATTGTAAGT---CCAAT- |
| Biscogniauxia latirima 90080703 | (none) | AACATGCGTGAGATTGTAAGT---GCAACA |
| Biscogniauxia latirima 89101101 | (none) | AACATGCGTGAGATTGTAAGT---GCAACA |
| Biscogniauxia granmo | (none) | AACATGCGTGAGATTGTAAGT---GATAC- |
| Biscogniauxia formosana | (none) | AACATGCGTGAGATTGTAAGT---GCAAC- |
| Biscogniauxia cylindrispora | (none) | AACATGCGTGAGATTGTAAGT---GCAAC- |
| Biscogniauxia citriformis 88113012 | (none) | AACATGCGTGAGATTGTAAGT---GCACTT |
| Biscogniauxia citriformis 129 | (none) | AACATGCGTGAGATTGTAAGT---GCACTT |
| Biscogniauxia capnodes var rumpens 144 | (none) | AACATGCGTGAGATTGTAAGT---CCAAC- |
| Biscogniauxia capnodes 142 | (none) | AACATGCGTGAGATTGTAAGT---CCAAT- |
| Biscogniauxia capnodes 138 | (none) | AACATGCGTGAGATTGTAAGT--CCAAAC- |
| Biscogniauxia atropunctata | (none) | AACATGCGTGAGATTGTAAGT---CCTGC- |
| Biscogniauxia arima | (none) | AACATGCGTGAGATTGTAAGT---GCACC- |
| Biscogniauxia anceps | (none) | AACATGCGTGAGATTGTAAGT---CCAGC- |
| Annulohypoxylon urceolatum | (none) | AACATGCGTGAGATTGTAAGT-----ATTA |
| Annulohypoxylon stygium var annulatum 91042205 | (none) | AACATGCGTGAGATTGTAAGT-----ATT- |
| Annulohypoxylon stygium var annulatum 3 | (none) | AACATGCGTGAGATTGTAAGT-----ATT- |
| Annulohypoxylon stygium 90081906 | (none) | AACATGCGTGAGATTGTAAGT-----ATT- |
| Annulohypoxylon stygium 90041409 | (none) | AACATGCGTGAGATTGTAAGT-----ATT- |
| Annulohypoxylon squamulosum | (none) | AACATGCGTGAGATTGTAAGT-----ATT- |
| Annulohypoxylon nitens 91022108 | (none) | AACATGCGTGAGATTGTAAGT-----ATT- |
| Annulohypoxylon nitens 293 | (none) | AACATGCGTGAGATTGTAAGT-----ATT- |
| Annulohypoxylon multiforme var alaskense | (none) | AACATGCGTGAGATTGTAAGT-----ATT- |
| Annulohypoxylon multiforme | (none) | AACATGCGTGAGATTGTAAGT-----ATT- |
| Annulohypoxylon moriforme var microdiscus | (none) | AACATGCGTGAGATTGTAAGT-----ATT- |
| Annulohypoxylon minutellum | (none) | AACATGCGTGAGATTGTAAGT-----ATT- |
| Annulohypoxylon elevatidiscus | (none) | AACATGCGTGAGATTGTAAGT-----ATT- |
| Annulohypoxylon cohaerens | (none) | AACATGCGTGAGATTGTAAGTT----ATT- |
| Annulohypoxylon bovei var microspora | (none) | AACATGCGTGAGATTGTAAGT-----ATT- |
Columns
None of the columns has a description.
