#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on March 29, 2024; 12:00 GMT TreeBASE (cc) 1994-2008 Study reference: Hernández-ledesma P., Flores olvera H., & Ochoterena H. 2010. Cladistic analysis and taxonomic synopsis of Anulocaulis (Nyctaginaceae) based on morphological data. Systematic Botany, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S10350] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=25; TAXLABELS A.annulatus A.eriosolenus A.hintoniorum A.leiosolenus_var._gypsogenus A.leiosolenus_var._howardii A.leiosolenus_var._lasianthus A.leiosolenus_var._leiosolenus A.reflexus B.alata B.anisophylla B.coccinea B.diffusa B.erecta B.gracillima B.spicata B.xantii Co.arabicus Co.brandegeei Co.plumbagineus Co.scandens Cy.crassifolia Cy.gypsophiloides M.glabrifolia N.capitata O.hypogaea ; END; BEGIN TAXA; TITLE Taxa2; DIMENSIONS NTAX=25; TAXLABELS Anulocaulis_annulatus Anulocaulis_eriosolenus Anulocaulis_hintoniorum Anulocaulis_leiosolenus_gypsogenus Anulocaulis_leiosolenus_howardii Anulocaulis_leiosolenus_lasianthus Anulocaulis_leiosolenus_leiosolenus Anulocaulis_reflexus Boerhavia_alata Boerhavia_anisophylla Boerhavia_coccinea Boerhavia_diffusa Boerhavia_erecta Boerhavia_gracillima Boerhavia_spicata Boerhavia_xantii Commicarpus_arabicus Commicarpus_brandegeei Commicarpus_plumbagineus Commicarpus_scandens Cyphomeris_crassifolia Cyphomeris_gypsophiloides Mirabilis_glabrifolia Nyctaginia_capitata Okenia_hypogaea ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M5179] TITLE 'Hernandez-Ledesma et al- Character Matrix'; LINK TAXA = Taxa2; DIMENSIONS NCHAR=41; FORMAT DATATYPE=Standard SYMBOLS= "0 1 2 3 4 5 6 7" MISSING=? GAP= -; CHARSTATELABELS 1 Duration / annual perennial, 2 Mucilaginous_rings_on_stems / absent present, 3 Leaf_arrangement / evenly_distributed_along_the_stem concentrated_on_the_lower_half, 4 Leaf_consistency / herbaceous succulent 'leathery-succulent', 5 Leaf_margin / entire sinuate_to_undulate crenulate, 6 Leaf_apex_angle / acute obtuse, 7 Pustules_on_leaves / absent present, 8 Inflorescence_ramification / absent present, 9 Ramification_pattern / monopodial sympodial, 10 Minimum_flowering_unit_arrangement / umbelliform racemiform monochasium, 11 Pedicel_subtending_the_flowers / absent present, 12 Number_of_bracts_subtending_a_single_flower / 1. 2. 3. 4. 5., 13 Floral_bract_texture / herbaceous chartaceous scarious, 14 Floral_bract_shape / lanceolate ovate widely_ovate, 15 Pustules_on_floral_bracts / absent present, 16 Bracts_persistence_in_mature_fruits / deciduous persistent_not_accrescent persistent_accrescent, 17 Perianth_limb_color / white_to_pink violet_to_magenta 'reddish-orange' 'yellow-green', 18 Perianth_shape / campanulate 'funnel-shaped', 19 'Chasmogamous flower length (mm)' / '0.1-6.2' '6.2-12.5' '12.5-20.0' '20.0-26.8' '26.8-31.8' '31.8-38.0', 20 Perianth_indumentum / absent present, 21 Perianth_pubescence / puberulent villous, 22 Stigma_surface / smooth papillate, 23 'Anther width (mm)' / '0.2-1.1' '1.3-2.3', 24 'Exerted portion of the filaments (mm)' / '0.2-9.5' '12.0-40.0_', 25 Fruit_shape / turbinate biturbinate fusiform obovoid_to_obpyramidal claviform ellipsoid, 26 'Fruit length (mm)' / '2.3-4.4' '4.4-7.0' '7.0-9.6', 27 'Fruit width (mm)' / '0.4-2.0' '2.0-3.4' '3.4-4.9' '4.9-7.4', 28 Fruit_symmetry_in_the_transverse_plane / bilateral asymmetric, 29 Fruit_symmetry_in_the_longitudinal_plane / symmetric asymmetric, 30 Fruit_rib_number / '4-5' 10, 31 Ribs_profile_in_polar_view / triangular 'round-obtuse' linear, 32 Equatorial_crest_on_the_fruit / absent present, 33 Hyaline_glands_on_fruits / absent present, 34 Verrucose_glands__on_fruits / absent present, 35 Mucilage_on_wet_fruits / absent present, 36 Tubercles_on_wet_fruit / absent present, 37 Raphides_on_fruit / absent present, 38 Stalk_in_fruit / absent present, 39 Fruit_orientation_with_pespect_to_the_stalk / straight inclined, 40 Raphides_in_cotyledons / absent present, 41 'chromosomal Number (N)' / 12. 13. 20. 22. 24. 26. 27. 58., ; MATRIX [ 10 20 30 40 50 60] [ . . . . . .] Anulocaulis_annulatus 11{01}22{01}11000{12}2{02}110111100020100120000000-04 Anulocaulis_eriosolenus {01}1122111020{34}2211011110000011012000{01}101004 Anulocaulis_hintoniorum 11122{01}11120322111121000021100120000100-0? Anulocaulis_leiosolenus_gypsogenus 11122111020022110150-0111130011100100100? Anulocaulis_leiosolenus_howardii 11122111020022111140-0111120011100100100? Anulocaulis_leiosolenus_lasianthus 1112211102002211014100111120011100100100? Anulocaulis_leiosolenus_leiosolenus 11122111020021110150-01111200111001001004 Anulocaulis_reflexus 11122111020022110120-01{01}1120011100100100? Boerhavia_alata 000110{01}1100{01}2{01}100000-0003001000000100100? Boerhavia_anisophylla 10{01}2101112{01}{12}2201101100003001001000100100? Boerhavia_coccinea 10000001100{01}2{02}0010010000{34}001001010101100{05} Boerhavia_diffusa 1010{01}{01}0110002200100100003001001010101100{1567} Boerhavia_erecta 0{01}0000{01}1100{012}20100000-00030010000001011005 Boerhavia_gracillima 10101001120220101001000040010010101011{01}0? Boerhavia_spicata 0{01}0010{01}1110020100000-00030010010001011005 Boerhavia_xantii 0{01}011011110{01}2{01}100000-{01}003001000000101100? Commicarpus_arabicus 10001001101{123}0000011100004101011011{01}011112 Commicarpus_brandegeei 10001001101000000111000041010110{01}1001111? Commicarpus_plumbagineus 10001001101{12}00000111000042010110110011112 Commicarpus_scandens 10001001101{12}00003100-0004201011001001111? Cyphomeris_crassifolia 11011{01}00-1102000111101004201111000111110{13} Cyphomeris_gypsophiloides 11010000-11020001110-10042011110001111103 Mirabilis_glabrifolia 101{01}0001120412021011010030010010101110-0? Nyctaginia_capitata 1001{12}0{01}0-00-0{012}12213110{01}{01}01{13}1011000101100? Okenia_hypogaea 000{01}{01}{01}{01}0--0221{01}01131{01}00052300--000000110? ; END; BEGIN TREES; TITLE 'Hernandez-Ledesma-et al SB 09-25'; LINK TAXA = Taxa2; TRANSLATE 1 Mirabilis_glabrifolia, 2 Nyctaginia_capitata, 3 Okenia_hypogaea, 4 Boerhavia_alata, 5 Boerhavia_anisophylla, 6 Boerhavia_coccinea, 7 Boerhavia_diffusa, 8 Boerhavia_erecta, 9 Boerhavia_gracillima, 10 Boerhavia_spicata, 11 Boerhavia_xantii, 12 Commicarpus_arabicus, 13 Commicarpus_brandegeei, 14 Commicarpus_plumbagineus, 15 Commicarpus_scandens, 16 Cyphomeris_crassifolia, 17 Cyphomeris_gypsophiloides, 18 Anulocaulis_annulatus, 19 Anulocaulis_eriosolenus, 20 Anulocaulis_hintoniorum, 21 Anulocaulis_leiosolenus_gypsogenus, 22 Anulocaulis_leiosolenus_howardii, 23 Anulocaulis_leiosolenus_lasianthus, 24 Anulocaulis_leiosolenus_leiosolenus, 25 Anulocaulis_reflexus; TREE tree_04 = [&R] (1,((5,((20,((25,(22,23,(21,24))),(18,19))),(2,3))),(9,(7,(6,(((16,17),(13,(15,(12,14)))),(10,(8,(4,11))))))))); TREE tree_02 = [&R] (1,((5,(((25,(22,23,(21,24))),(20,(18,19))),(2,3))),(9,(7,(6,(((16,17),(15,(14,(12,13)))),(10,(8,(4,11))))))))); TREE tree_08 = [&R] (1,((9,(7,(6,((16,17),(13,(12,(14,15)))),(10,(8,(4,11)))))),(5,((20,((25,(22,23,(21,24))),(18,19))),(2,3))))); TREE tree_07 = [&R] (1,((5,((19,(18,(20,(25,(22,23,(21,24)))))),(2,3))),(9,(7,(6,(((16,17),(15,(14,(12,13)))),(10,(8,(4,11))))))))); TREE tree_06 = [&R] (1,((5,((20,((25,(22,23,(21,24))),(18,19))),(2,3))),(9,(7,(6,(((16,17),(15,(14,(12,13)))),(10,(8,(4,11))))))))); TREE tree_03 = [&R] (1,((9,(7,(6,((16,17),(13,(12,(14,15)))),(10,(8,(4,11)))))),(5,(((25,(22,23,(21,24))),(20,(18,19))),(2,3))))); TREE tree_05 = [&R] (1,((5,((19,(18,(20,(25,(22,23,(21,24)))))),(2,3))),(9,(7,(6,(((16,17),(13,(15,(12,14)))),(10,(8,(4,11))))))))); TREE tree_10 = [&R] (1,((5,((18,19,20,(25,(22,23,(21,24)))),(2,3))),(9,(7,(6,((16,17),(12,13,14,15)),(10,(8,(4,11)))))))); TREE tree_09 = [&R] (1,((9,(7,(6,((16,17),(13,(12,(14,15)))),(10,(8,(4,11)))))),(5,((19,(18,(20,(25,(22,23,(21,24)))))),(2,3))))); TREE tree_01 = [&R] (1,((5,(((25,(22,23,(21,24))),(20,(18,19))),(2,3))),(9,(7,(6,(((16,17),(13,(15,(12,14)))),(10,(8,(4,11))))))))); END;