#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on April 23, 2024; 14:15 GMT

TreeBASE (cc) 1994-2008

Study reference:
Loconte H., & Estes J. 1989. Phylogenetic systematics of Berberidaceae and Ranunculales
(Magnoliidae). Systematic Botany, 14: 565-579.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S104]

BEGIN TAXA;
        TITLE  Taxa1;
        DIMENSIONS NTAX=35;
        TAXLABELS
            Achlys
            Akebia
            Berberis
            Bongardia
            Boquila
            Caltha
            Caulophyllum
            Circaeaster
            Decaisnea
            Diphylleia
            Dysosma
            Epimedium
            Eranthis
            Gymnospermium
            Helleborus
            Holboellia
            Hydrastis
            Jeffersonia
            Kingdonia
            Lardizabala
            Leontice
            Mahonia
            Nandina
            Outgroup_to_Ranunculales
            Penianthus
            Plagiorhegma
            Podophyllum
            Ranzania
            Sargentodoxa
            Sinofranchetia
            Sinopodophyllum
            Sphenocentrum
            Stauntonia
            Trollius
            Vancouveria
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M1551]

	TITLE Table_1;
	LINK TAXA = Taxa1;
	DIMENSIONS NCHAR=40;
	FORMAT DATATYPE=Standard SYMBOLS= "0 1 2 3 4" MISSING=? GAP= -;

MATRIX
[                                    10        20        30        40]
[                                     .         .         .         .]
Achlys                       100112000?0000?0??100021002202000000?003
Akebia                       2001020000120000210000010001111100001000
Berberis                     000101100000000301110100102002?000001012
Bongardia                    1101120000000014111000210123021000001003
Boquila                      200102000122000111001001001001010000?00?
Caltha                       1001010000000100200000310001001001000001
Caulophyllum                 1001020000000002011000111023020000101001
Circaeaster                  10010101000001002?00002100?403031?00?000
Decaisnea                    0000020001120000110010010011001000001000
Diphylleia                   1011010001000010111000?10020001000001003
Dysosma                      101101000100001011000021002000120000?003
Epimedium                    1001021001000104011000210122001000011003
Eranthis                     110102000001010120000031000100100100?001
Gymnospermium                1101020000021002111000111023020000111001
Helleborus                   1001020000000101200000?10001001001000001
Holboellia                   200102000012000111000001001011110000?000
Hydrastis                    1000010001010000200000210001000000000000
Jeffersonia                  1001120010010110111000210022001000011003
Kingdonia                    10011101000101012?000021000403031?00?00?
Lardizabala                  200102000022000111001001001011110000?000
Leontice                     1101020000021002111000111023020000101001
Mahonia                      000102100000000301110100102002?000001012
Nandina                      000102000000000001000001102000000000?000
Outgroup_to_Ranunculales     ?0?0??000???0?0?00?0???0?0??0???000?0???
Penianthus                   000100000120000100000001001000000000?110
Plagiorhegma                 1001110010010010111000210022001000011003
Podophyllum                  10110100010100101?0000210020001200001003
Ranzania                     100102000000000301110?00102000120000?002
Sargentodoxa                 200102000022000111000001000003020000?00?
Sinofranchetia               200102000012000111000001001000110000?00?
Sinopodophyllum              1011010001010010110000?10020001200001003
Sphenocentrum                000100000120000000000001000000000000?110
Stauntonia                   200102000012000111001001001011110000?000
Trollius                     100101000000010120000021000100100100?001
Vancouveria                  1001120001000004011000210122001000011003
;
END;

BEGIN TREES;
      TITLE Tb4823;
      LINK TAXA = Taxa1;
         TRANSLATE
            1    Outgroup_to_Ranunculales,
            2    Sphenocentrum,
            3    Penianthus,
            4    Hydrastis,
            5    Circaeaster,
            6    Kingdonia,
            7    Trollius,
            8    Caltha,
            9    Eranthis,
            10   Helleborus,
            11   Decaisnea,
            12   Sinofranchetia,
            13   Boquila,
            14   Sargentodoxa,
            15   Akebia,
            16   Holboellia,
            17   Stauntonia,
            18   Lardizabala,
            19   Nandina,
            20   Caulophyllum,
            21   Gymnospermium,
            22   Leontice,
            23   Ranzania,
            24   Berberis,
            25   Mahonia,
            26   Epimedium,
            27   Vancouveria,
            28   Jeffersonia,
            29   Plagiorhegma,
            30   Achlys,
            31   Bongardia,
            32   Diphylleia,
            33   Dysosma,
            34   Podophyllum,
            35   Sinopodophyllum;
      TREE Fig._5 = [&R] (19,((20,(21,22)),((23,(24,25)),((32,(33,(34,35))):1.0,((30,31),((26,27),(28,29)))))))Berberidaceae;
      TREE Fig._4 = [&R] (11,(12,((13,14),(15,16,(17,18)))))18ceae;
      TREE Fig._3 = [&R] (4,((5,6),(7,8,(9,10))))Ranunculaceae;



END;