#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 19, 2024; 18:47 GMT TreeBASE (cc) 1994-2008 Study reference: Stoll M., Piepenbring M., Begerow D., & Oberwinkler F. 2003. Molecular phylogeny of Ustilago and Sporisorium species (Basidiomycota, Ustilaginales) based on internal transcribed spacer (ITS) sequences. Canadian Journal of Botany, 81: 976-984. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S1075] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=56; TAXLABELS Cintractia_axicola Farysia_chardoniana Sorosporium_tumefaciens Sporisorium_aegypticum Sporisorium_catharticum Sporisorium_cenchri Sporisorium_chrysopogonis Sporisorium_cruentum Sporisorium_culmiperdum Sporisorium_destruens Sporisorium_destruens_GB 'Sporisorium dimeriae-ornithopodae' Sporisorium_fastigiatum Sporisorium_formosanum Sporisorium_holwayi Sporisorium_lepturi Sporisorium_mishrae Sporisorium_moniliferum Sporisorium_occidentale 'Sporisorium panici-leucophaei' 'Sporisorium paspali-notati' Sporisorium_polliniae Sporisorium_provinciale Sporisorium_pseudechinolaenae Sporisorium_puellare Sporisorium_reilianum_GB Sporisorium_sorghi_GB 'Sporisorium themedae-arguentis' Sporisorium_trachypogonicola Sporisorium_veracruzianum Tolyposporium_junci Ustilago_affinis Ustilago_avenae_F946 Ustilago_avenae_MP2362 Ustilago_bullata Ustilago_bullata_GB Ustilago_crameri Ustilago_cynodontis Ustilago_cynodontis_GB Ustilago_echinata Ustilago_esculenta Ustilago_hordei Ustilago_hordei_GB Ustilago_maydis Ustilago_maydis_GB Ustilago_nuda_GB Ustilago_pamirica Ustilago_schroeteriana Ustilago_scitaminea Ustilago_scitaminea_GB Ustilago_sparsa Ustilago_trichophora Ustilago_tritici_GB Ustilago_turcomanica Ustilago_vetiveriae Ustilago_xerochloae ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M714] TITLE ITS_rDNA; LINK TAXA = Taxa1; DIMENSIONS NCHAR=728; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Cintractia_axicola TCCGCACCTGTTCCAACTAAA--CTGGGCTACCATTTT----CAACACTG-TTGCATGGGTTGG----------CTGTCAAGTA------------------------------------------------------------GCGCAAGCTACGAGGCGCCAACAAATTTAACACACAC-TTATGATAA---CTAGGA-TTTG-------------AATGTCAAC--------TGATGAA-CGGCTGGTAATGCGGTCG--TAAAA-TC--AAAAAATAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAG{CT}GAAACGCGATAGGTAAT{CG}TGAATTGCAGAATGTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCTCCGGGACTTTCATCCGGAGAGCATGCCTGTCTGAGGGCCGCGAATTTCTTCGAAC-GACAGC{CT}{CT}TTTTCATTGCGAA---GATGGCTGGCGG-ATCGGTTCTGAGGGTTTTT-----------GCCATTTGCCTTGGCTCCCTCGAAATGCAT{AT}AGCTGGAATGAATTAACCAGAA----------GTTGGAAGGATATA------CGTCCCT-CTCCCTT----CGGATCTTGATAAT-TATCG-AGGTACGAACGTGAAGGAAACTCCTTATTCACT-GACTTG-----------TGGCAATCAATGC--TGGCTTCT-AAAGTCGCCC Farysia_chardoniana TCCGCACCTTTT-AAGCTAAA--CTGGGCTACCATTTT----ACACACGG-TTGCATCTGGTCAGAGC---------------------------------------------------------------------------------TTCGGCGCTGGCCAAAATCTTTACACACGCTGATCTGTAGTATTTGTATGA-GTTG--------------ACTTTATA------------------------------GTCG--TATAA-CT--AAAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAAACGCGATAGGTAATGTGAATTGCAGAATGTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCTCCTGGACTTACATCCGGAGAGCATGCCTGTCTGAGGGCCGCGAATTTCTTCGAGC--ACCCGTTTTTT----AATTA----GAGCGCGGTGG-ATCGGTACTGAGGGTTT-------------GCCATTTGCACTGGCTCCCTCTAAATACATCAGCTGGACTGCACATGCT--------------AGAGGAAGGATATA------CGTCCCT-CTCCCTC----CGGATTTTGATAAT-TATCAAAAACCCGGACGTGATGGAAACTTCTTGTCTC---GACCA---------TGGTGGC-----------TGGCTTT---AACCCGCCC Sorosporium_tumefaciens CTCGCACCTGT-CTAACTAAA-CTTGAGCTACCTTTTTTT--CAACACGG-TTGCATCGGGTTGAGCGGTGAGCGTTCTC---------------------------------------------GGACGTGAA------GCCCTCAACAC-----------------TTTACACAAACAC-TTTTGATTC--TCTAGGA--TTGGAAGG--------ACAATTTTA----------------CGACTGGTAATTCGGTCGTTTAAA--TTTT-AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCTGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAGCCGACCATTTTTTTTT-AAATTAAA----AGTGGACGG-ATCGGTAATGAGGGGTTTTTTTT-------GCCATTCACCGTGGCTCCCTCGAAATACATTAGCGCAT--CCATTTGAT--AGGCAA-GAACGGACGAAAGCTCACT--TTTTCGCCCTTTTTCTTCCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGCGGAGAAA--GGGTAC-GAGCTGGA-CGCAACGTT----TTTGCTGTTTGGC---GTGCTTCTGAACCCCGCCC Sporisorium_aegypticum CTCGCACCTGT-CTAACTAAA-CTTGAGCTACAACTTTTT--TAACACGG-TTGCATCGG-TTGG---------CTGTCAAAC--AGTG--CGGCGCGTTCCAGAATTTATTTTCTGGAATGCCGCTAAGCTCGGCGG--------CGGTCGACACA-------------CAATTAAACAC-TTTTGATAA--TCTAGGA--TTTGAATGAAAG---TTCATTTT----ATG-ATGGAAC---CGACTGGTAATGCGGTCGTCTAAA--TCT--AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-GACAGCTTTCTTT----GTGAGA---AGGTTGGCGG-ATCGGTATTGAGGGTCTTT-----------GCCATTTACCATGGCTCGCTCGAAATGCATTAGCGCAT--CCATTTGAT--AGGCAA-GA-CGGACGAAAGCTCATT----TTCGCTCT--CTCTTCCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGAGATTGAGAT-GGGTAC-GAGCTGGA-CGCAACGTT-----TTGCTGGTTGGGA--GTGCTTCTGAACCCCGCCC Sporisorium_catharticum CTCGCACCTGT-CTAACTAAA-CTTGAGCTACCTTTTTT---AAACACGG-TTGCATCGG-TGGAGTG-----CCTGTC----------------------AAAAAAACGCGAAAGTGTTCTTTTTTGGTTC--------GGCCTCTACAC-----------------TTTACACAAACAC-TTTGGATCT--TCTAGGA--TTTGAATG--------ACAATTTA-----------------TGACTGGTAATTCGGTCGTTTAAA--TTT--AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCTGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAACCGA--TCTTTTTTTT--AATTAAA----AAGGGTTGG-ATCGGTAGTGAGGGTTTTTT----------GCCATTAACCGTGGCTCCCTCGAAATACATTAGCGCAT--CCATTTGAT--AGGCAA-GAACGGACGAAAGCTCAAT--CTTTCGCCCT--CTCTTCCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGCGAGGAAA--GGGCAA-GAGCTGGA-CGCAACGTT----TTTGCTGTTTGGC---GTGCTTCTGAACCCCGCCC Sporisorium_cenchri CTCGCACCTGT-CTAACTAAA-CTTGAGCTACCTTTTTT---CAACACGG-TTGCATCGG-TTGAG---------TGTC----------------------AAAAGAATGCGAAAGTATTTTTTTT--------------GGCCTCGACAC---------------TTTACACAAAAACAC-TTTTGATTTA-CTTAGGA--TTTGAATG--------ACAATTTA-----------------TGACTGGTAATTCGGTCGTTTAAA--TTT-AAAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCTGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAACCGAC-TCTTTTTTT---AATTAAA---AAAGGGACGG-ATCGGTATTGAGGGTTTTTTT---------GCCATTTACCGTGGCTCCCTCGAAATACATTAGCGCAT--CCATTTGAT--AGGCAA-GAACGGACGAAAGCTCAAT-TTTTTCGCCCT--CTCTTCCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGCGAGGAAA--GGGCAA-GAGCTGGA-CGCAACGTT----TTTGCTGTTTGGC---GTGCTTCTGAACCCCGCCC Sporisorium_chrysopogonis CTGGCGCCTGT-CTAACTAAA-CTTGAGCTACCTTTTT----CAACACGG-TTGCATCGG-TAGAG---------TGGC--------------------------GAACGCGCGTTCTTTGACGTGAGCTC---------GCCCTCTACAC-----------------TTTACACAAACAC-TTTTGATCT--TCTAGGA--TTTGAATG--------ACAATTTA-----------------TGACTGGTAATTCGGTCGTTTAAA--TTT--AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCTGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-CAC-TCTTTTTTTT--AATTAAG----AAGGGTCGG-ATCGGTAGTGAGGGTTTTT-----------GCCATTAACCGTGGCTCCCTCGAAATACATTAGCGCAT--CCATTTGAT--AGGCAA-GAACGGACGAAAGCTCACC---TTTCGCTCT--CTCTTCCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGCGGAGAAA--GGGCAA-GAGCTGGA-CGCGACGATC----TTGCTGTTTGGC---GTGCTTCTGAACCCCGCCC Sporisorium_cruentum CCCGCACCTGT-CCAACTAAA-CTAGGGCTACCTTTTTTT--CAACACGG-TTGCATCGG-TCGGG----------TTC---------------GAAGCAGAGGCATGCGAGAGTGTGTCTTTACGAC------------GACC---------------TGACACC---TTACAAAAACAC-TTTTGATGA--TCTAGGA-TTAAGAAAG--AATTTATTATTTTTA----------------CGGCTGGTAATGCGGTCGTCTAAAAATCTT-AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCTGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAGCG-CCAGCTTTTTT----AATTAA----GAGATGGTAG-CTTGGTAGTGAGGGTTTT------------GCCATTTACCGTGGCTCCCTCGAAATGCATTAGTGCAT--CCATTTAAT--AGGCAAAGA-CGGACGAAAGCTCGAT-TTTTTCGCTCCC-CTCTTCCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGTGAAAGGGGGGAGCAA-GAGCTGGA-CGCAACGTCG----TTGCTGGTTGGA---GTGCTTCTGAACACCACCT Sporisorium_culmiperdum CC-GCACCTGT-CCAACTAAA-CTAGGGCTACCCATTT----CAACACAG-TTGCATCGG-TTGGG-------CCTGTC-----------------------AAGCTGTGCGAGAGTTCAGCGAAGGC------------GGCCT-GACAAAT-------------TATACCAAAACACAC-TTTTGATGA--CCTAGGA-TTTTGAAAG---TATTT-ACTATTTTA---------------CGGCTGGTAATGCGGTCGTCTAAAA-TTTT-AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCTTGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAACG-TATGCTTTTTT----CAGTAAA----AGCAGGCGG-ATCGGTAGTGAGGGTTTTTTTT--------GCCATTAATCGTGGCTCCCTCGAAATGCATTAGTGCAT--CCATTTAAT--AGGCAAAGA-CGGACGAAAGCTCATC--CTTTTGCTCT--CTCTTCCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGCGGAGAAA--GAGCAAAGAGTTGGA-CGCAACGAC---TTTTGCTGGTTGGA---GTGCTTCTGAACCCCGCCC Sporisorium_destruens CTCGCACCTGT-CTAACTAAA-CTTGAGCTACCTTTTTT---CAACACGG-TTGCATCGGTTCGAG---------TGTC--------------------GAAAAAAAACGCGAAAGTGTGGTTTTTTTTCT---------GGCCTCAACACC-----------------TTACACAAACACTTTTTGATTT--ACTAGGA--TTGGAAGG-------AACAATTGA-----------------TGACTGGTAATTCGGTCATTTAAATGTTT-AAAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCTGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAGCCGAC-TCTTTTTTT---AATTGAA---AAAGGGTTGG-ATCGGTATTGAGGGTTTTTT----------GCCATTCACCGTGGCTCCCTCGAAATACATTAGCGCAT--CCATTTGAT--AGGCAA-GAATGGACGAAAGCTCAAT-TTTTTCGCTCT-TTCTTTTCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGCAAAGAATT-GGGTAC-GAGCTGGA-CGCAACGTT----TTTGCTGTTTGGT---GTGCTTCTGAACCCCGCCC Sporisorium_destruens_GB CTCGCACCTGT-CTAACTAAA-CTTGAGCTACCTTTTTT---CAACACGG-TTGCATCGGTTCGAG---------TGTC--------------------GAAAAAAAACGCGAAAGTGTGGTTTTTTTTCT---------GGCCTCAACACC-----------------TTACACAAACACTTTTTGATTT--ACTAGGA--TTGGAAGG-------AACAATTGA-----------------TGACTGGTAATTCGGTCATTTAAATGTTT-AAAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCTGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAGCCGAC-TCTTTTTTT---AATTGAA---AAAGGGTTGG-ATCGGTATTGAGGGTTTTTT----------GCCATTCACCGTGGCTCCCTCGAAATACATTAGCGCAT--CCATTTGAT--AGGCAA-GAATGGACGAAAGCTCAAT-TTTTTCGCTCT-TTCTTTTCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGCAAAGAATT-GGGTAC-GAGCTGGA-CGCAACGTT----TTTGCTGTTTGGT---GTGCTTCTGAACCCCGCCC 'Sporisorium dimeriae-ornithopodae' -CCGCACCTGT-CCAACTAAA-CTAGGGTTACCTTTTT-----AACACGG-TTGCATCGG-TTGGGTTT------TGTC----------------------------GAGCGAGTTTTTACGAACTCGCAA---GGCGG-GGCCT-GACAAC---------------TTTAACACAAACAC-TTTTGATGA--TCTAGGA-TTTTGAAAG-----TTTACCTTTTAA----------------CGGCTGGTAATGCGGTCGTCTAAAA-TTGT-AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATTTTTGAACGCACC-TTGCGCTCCCTGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAACGCAC-GCTTTTTT----CAGTAAA----GGCATGCGG-ATCGGTAGTGAGGGTTTTTTT---------GCCATTAACCGTGGCTCCCTCGAAATGCATTAGTGCAT--CCATTTAAT--AGGCAAAGA-CGGACGAAGGCTCGAC---TTTCGCTCT--CTCTTCCTTGCCGGGTTTTGATAA--TATCAGGACTTCGGAAGCGAAGAAA--GGGCAA-GAGCTGGA-CGCAACGAC---TTTTGCTGGTTGGA---GTGCTTCTGAACCCCGCCT Sporisorium_fastigiatum CCCGCACCTGT-CCAACTAAA-CTAGGGCTACTTTTTT----CAACACGG-TTGCATCGG-TTGGG------TTGGGTC----------------------------------GAGCGAGTTTTCGGACTCGTGAGGCC-GGCCT-AACAAC-----------------TTAACAAAACAC-TTTTGATGA--TCTAGGAATTTTGAAAG-----TCT-ATCTTTTAA---------------CGGCTGGTAATGCGGTCGTCTAAAAATGG--AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCTGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAACCCA-CGCTTTTTC----AAGTAAA----GGCGTGCGGGATCGGTAGTGAGGGTT--------------GCCATTCACCGTGGCTCGCTCGAAATGCATTAGCGCAT--CCATTGAATTGAGGCAAAGA-CGGACGAAGGCTCGCC---TTTCGCTCT--CTCTTTCTTGCCGGGTTTTGATAC--TATCAGGACTTCGGAGGCGGAGAGA--GGGCAT-GAGCTGGA-CGCGACGAC----TTTGTCGGTTGGAA--GTGCTTCTGAACCCCGCCT Sporisorium_formosanum CTCGCACCTGT-CTAACTAAAACTTGAGCTACCTTTTTT---CAACACGG-TTGCATCGGCCCGAG---------TGTC---------------------GAAAAGAACGCGAAAGTGTTTTTTTTCT------------GGCCTCGACACTT---------------TACACAAAAACACTTTTTGATTT--ACTAGGA--TTGGAAGG-------AACAATTGA-----------------TGACTGGTAATTCGGTCGTTTAAATGTTT-AAAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCTGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAACCGAC-TCTTTTTTTTT-AATTAAA---AAAGGGTTGG-ATCGGTATTGAGGGTTTTTTTTT-------GCCATTCACCGTGGCTCCCTCGAAATACATTAGCGCAT--CCATTTGAT--AGGCAA-GAACGGACGAAAGCTCAAT-TTTTTCGCTCT-TTCTTTTCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGCAAAGAATT-GGGTAC-GAGCTGGA-CGCAACGTT----TTTGCTGTTTGGT---GTGCTTCTGAACCCCGCCC Sporisorium_holwayi CCCGCACCTGT-CTAACTAAA-ATAGGGCTATCCAAAT----TAACACGG-TTGCATCGG-TTGGGTTTG-------------------------CCAGACAGAGACATGCGAAAGCGTGGCTCTCAAC--------GGCAGCCT-GACACCA----------------ACAAACAAACAC-TTTTGATGA--CATAGGA--TTTGAAAG---TATTTTATTATTTAA---------------CGGCTGGTAATGCGGTCGTCTAAAAA--TTAAAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCTGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAACGCC-AGCTTTTTT----CA-TAAA----TGCTGGCGG-ATCGGTAGTGAGGGTTTTTT----------GCCATTTACCGTGGCTCCCTCTAAATGCATTAGTGCAT--CCATTTGAT--AGGCAAAGA-CGGACGA{AG}AGCTCAAT--TTTTCGCTCT--CTCTTCCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGCGGAGAAA--GAGCAA-GAGCTGGA-CGCGACGGC---TTTTGCTGGTTGGA---GTGCTTCTGAACACCGCCC Sporisorium_lepturi CCCGCACCTGT-CCAACTAAA-CTAGGGCTACCTTTTT----TAACACGG-TTGCATCGG-TTGGGTTT-----TTGTCGAGCG-AGTG-----------------------------------TGAACTCGCAAGGCGGGGCCT-GACAATT----------------TAACACAAACAC-TTTTGATGA--TTTAGGA-TTTTGAAAG-----TTTACCTTTTAA----------------CGGCTGGTAATGCGGTCGTCTAAAA-TTGT-AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCTGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAACGCAC-GCTTTTTT----CAGTAAA----GGCGTGCGG-ATCGGTAGTGAGGGTTTTTTT---------GCCATTAACCGTGGCTCCCTCGAAATGCATTAGTGCAT--CCATTTAAT--AGGCAAAGA-CGGACGAAGGCTCGAC---TTTCGCTCT--CTCTTCCTTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGCGAAGAGA--AGGCAA-GAGCTGGA-CGCAACGAC---TTTTGCTGGTTGGA---GTGCTTCTGAACCCCGCCT Sporisorium_mishrae CTCGCACCTGT-CCAACTAAA--CTGAGCTACCTTTTT----CAACACGG-TTGCATCGG-TTGAGTGT----CCTGTC---------------------C--AAAAACGCGAGAGCGTCGATGGGCCGG----------GGCCTCGACACT-----------------TTACACACACAC-TTTGGATCT--ACTAGGA--TTTGAATG--------ACAATTTA-----------------TGACTGGTAATTCGGTCGTTTAAA--TTT--AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCTGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAACGCAC-GCTTTTTTT---AATTAAT---TGGCAGGCGG-ATCGGTAGTGAGGGTTTTCTT---------GCCATTAACCGTGGCTCCCTCGAAATGCATTAGCGCAT--CCATTTGAT--AGGCAA-GGACGGACGAAAGCTCATC---TTTCGCCCT--CTCTTCCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGCGGAGAAA--GGGTAC-GAGCTGGA-CGCGACGTT----TTTGCTGGTTGGC---GTGCTTCTGAACCCCGCCC Sporisorium_moniliferum CCCGCACCTGT-CCAACTAAA-CTAGGGCTACCTTTTTTT--CAACACGGGTTGCATCGG-TCGGG----------TTC-----------------GAAGCAGAGGCATGCGAGAGTGTGCCTTTACGAC----------GACCT-GACACC-----------------TTACAAAAATAC-TTTTGATGA--TCTAGGA-TTAAGAAAG---AATTT-ATTATTTTTA--------------CGGCTGGTAATGCGGTCGTCTAAAAATCTT-AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCTGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAGC-GCCAGCTTTTTT----AATAAA----GAGATGGTAG-CTTGGTAGTGAGGGTTTT------------GCCATTTACCGTGGCTCCCTCGAAATGCATTAGTGCAT--CCATTTAAT--AGGCAAAGA-CGGACGAAAGCTCGAT-TTTTTCGCTCCCCCTCTTCCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGTGAAAGGGGGGAGCAA-GAGCTGGA-CGCAACGTCG----TTGCTGGTTGGA---GTGCTTCTGAACACCACCT Sporisorium_occidentale CCCGCACCTGT-CCAACTAAA-ATAGGGCTACCCTTTTT---CAACACGG-TTGCATCGG-TTGGG-------CTTGTCAGAC--AGTGCGC-----------------GCGAAAGCGTGTTTTTCTC---GACGGC---AGCC---------------TGACACCAA--CACAAAAACAC-TTTTGATGA--CATAGGA--TTTGAAAG--TATTTAACATTTTA-----------------CGGCTGGTAATGCGGTCGTCTAAAA-TCTTAAAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCTGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC--GTCGGTTTTTTT---AAGTAAA----GGCTGGCGG-ATCGGTAGTGAGGGTTTTTTTTT-------GCCATTTACCGTGGCTCCCTCGAAATGCATTAGTGCAT--CCATTTAAT--AGGCAAAGA-CGGACGAAAGCTCGAC--TTTTCGCTCT--CTCTTCCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGGGGCGGAGAAA--GAGCAA-GAGCTGGA-CGCGACGAC---TTTTGCTGGTTGGA---GTGCTTCTGAACACCGCCC 'Sporisorium panici-leucophaei' CTCGCACCTGT-CTAACTAAA-CTTGAGCTACCTTTTTTT--CAACACGG-TTGCATCGG-TTGAG---------TGTC---------------------A--AAGAACGCAAAAGTGTTTTTCT---------------GGCCTCGACAC----------------TTTACACAAAACACTTTTTGATTT--ACTAGGA--TTTGAATG--------ACAATTTA-----------------TGACTGGTAATTCGGTCATTTAAA--TTT-AAAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCTGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-GAC-TCTTTTTTT---AATTAAA----AAGGGACGG-ATCGGTATTGAGGGTTTTTTT---------GCCATTCACCGTGGCTCCCTCGAAATACATTAGCGCAT--CCATTTGAT--AGGCAA-GAACGGACGAAAGCTCATC-TTTTTCGCTCT--TTCTTCCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGCGAAGAAA--GGGTAC-GAGCTCGA-CGCAACGTT----TTTGCTGTTTGGC---GTGCTTCTGAACCCCGCCC 'Sporisorium paspali-notati' CCCGCACCTGT-CCAACTAAA-ATAGGGCTACCCATT-----CAACACGG-TTGCATCGG-TCGGG-------CTTGTCAGAC--AGT-----------------GCGCACGAAAGCGCGTTCTCGTC-------GGC--AGCCC-GACACCA----------------ACACAAAAACAC-TTTTGATGA--CGTAGGA--TTTGAAAG-----TAAGCATTTTA-----------------CGACTGGTAATGCGGTCGTCTAAAAAAA--AAAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GCGAATCATCGAATCTTTGAACGCACCCTTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCGGTTTGAGGGCCGCGAATCGTTTCGAAC--GTCGCTTTTTT----CAGGAAA----GGCTGGCGG-ATCGGTAGTGAGGGGTTTATT---TTTCTTGCCATTTACCGTGGCTCCCTCGAAAAGCATTAGTGCAT--CCATTCGAT--AGGCAAAGA-CGGACGAAAGCTCGAT--CTTTCGCTCT--TTCCACCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGCGGAGAAA--GAGCAA-GAGCTGGA-CGCAACGAC---TTTTGCTGGTTGGA---GTGCTTCTGAAAACCACCC Sporisorium_polliniae CTCGCACCTGT-CTAACTAAA-CTTGAGCTACCTTTTTT---CAACACGG-TTGCATCGG-TTGGGTGT----CCTGTC--------------------AA--AAAAATGCGAAAGTGTTTTTTGGTTCG----------GGCCTCGACAC-----------------TTTACACAAACAC-TTTTGATTC--TCTAGGA--TTTGAATG--------ACAATTTA-----------------TGACTGGTAATTCGGTCATTTAAA--TTT--AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GCGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCTTGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC--AATCCTTTTTTT---AATTAAA----AAGGGTTGG-ATCGGTAGTGAGGGTTTTTTTTT-------GCCATTAACCGTGGCTCCCTCGAAATACATTAGCGCAT--CCATTTGAT--AGGCAA-GAACGGACGAAAACTCATT--TTTTCGCTCT--TTCTTCCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGGGGAGAAA--GGGTAACGAGTTGGA-CGCAACGTT----TTTGCTATTTGGT---GTGCTTCTGAACCCCGCCC Sporisorium_provinciale CTCGCACCTGT-CCAACTAAA-CTTGAGCTACCCCTTT----TAACACGG-TTGCATCGG-TTGAGTTTG---CCTGTCCAAG-----------------------AACGCGAAAGCGCTTTTTGCGACG-CGGC-----TTCTC-GACAC---------------TTTACACACAAACAC-TCTTGATAA--CCTAGGA--TTTGGATG--------ACAATTTA-----------------TGACTGGTAATTCGGTCGTTTAAA--TTT--AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGGACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCTGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-GACGACTTTTTT-----AACAGA---AAGTTGGCGG-ATCGGTAGTGAGGTTTTTTT----------GCCATTAACCGTGGCTCCCTCGAAATACATTAGCGCAT--CCATTTTAT--AGGCAA-GAACGGACGAAAGCTCATC---TTTCGCCCT--CTCTTCCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGCGGAGAAA--GGGTAC-GAGCTGGA-CGCAACGTT----TTTGCTGTTTGGC---GTGCTTCTGAACCCCGCCC Sporisorium_pseudechinolaenae CCCGCACCTGT-CCAACTAAA-CTAGGGCTACCTTTTT----TAACACGG-TTGCATCGG-TTGGGTTG------GGTC------------------------------GAGCGAGTTTTCACGAACTCGCAAA--GCT-CGCCT-GACAAC------------------TTAACAAACAC-TTTTGATGA--TCTAGGA-TTTTGAAAG-----TCTATCTTTTTAA---------------CGGCTGGTAATGCGGTCGTCTAAAAATTG--AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCTGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAACCCCACGCTTTTTT----CAGTAAA----GGCGTGCGGGATCGGTAGTGAGGGTT--------------GCCATTCACCGTGGCTCGCTCGAAATGCATTAGCGCATATCCATTTAATTGAGGCAAAGA-CGGACGAAGGCTCGCC---TTTCGCTCT--CTCTTCCTTGCCGGGTTTTGATAC--TATCAGGACTTCGGAAGCGGAGAGA--GGGCAT-GAGCTGGA-CGCAACGAC----TTTGTCGGTTGGAAAAGTGCTTCTGAACCCCGCCT Sporisorium_puellare CCCGCACCTGT-CCAACTAAA-ATAGGGCTACCCATT-----CAACACGG-TTGCATCGG-TCGGG-------CTTGTCAGAC--AGTGCGC--------------ACGAAAGCGCGTTCTCGTCGGC------------AGCC---------------CGACACCAA--CACAAAAACAC-TTTTGATGA--CGTAGGA--TTTGAAAG-----TAAGCATTTTA-----------------CGGCTGGTATTGCGGTCGTCTAAAA-----AAAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GCGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCGGTTTGAGGGCCGCGAATCGTTTCGAAC--GTCGCTTTTTTT---CAGGAAA----GGCTGGCGG-ATCGGTAGTGAGGGTTTTTTTTTCTTTCTTGCCATTTACCGTGGCTCCCTCGAAAAGCATTAGTGCAT--CCATTCGAT--AGGCAAAGA-CGGACGAAAGCTCGAC--CTTTCGCTCT--TTCCACCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGCGGAGAAA--GAGCAA-GAGCTGGA-CGCAACGAC---TTTTGCTGGTTGGA---GTGCTTCTGAAAACCGCCC Sporisorium_reilianum_GB CCCGCACCTGT-CCAACTAAA-CTAGGGCTACTTTTTT----CAACACGG-TTGCATCGG-TTGGGTTG------GGTC----------------------------GAGCG--AGTTTTCGGACTCGTGAGG----CC-GGCCT-GACAAC-----------------TTAACAAAACAC-TTTTGATGA--TCTAGGAATTTTGAAAG------TCT----------ATCTTTGAA-----CGGCTGGTAATGCGGTCGTCTAAAAATGG--AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCTGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAACC-CACGCTTTTTT----AAGTAAA----GGCGTGCGGGATCGGTAGTGAGGGTT--------------GCCATTCACCGTGGCTCGCTCGAAATGCATTAGCGCAT--CCATTGAATTGAGGCAAAGA-CGGACGAAGGCTCGCC---TTTCGCTCT--CTCTTCCTTGCCGGGTTTTGATAC--TATCAGGGCTTCGGAGGCGGAGAGA--GGGCAT-GAGCTGGA-CGCGACGAC----TTTGTCGGTTGGAA--GTGCTTCTGAACCCCGCCT Sporisorium_sorghi_GB CCCGCACCTGT-CCAACTAAA-CTAGGGCTACCTTTTTT---CAACACGG-TTGCATCGG-TCGGG----------TTC-----------------GAAGCAGAGGCATGCGAGAGTGTGTCTTTACGAC----------GACCT-GACACC-----------------TTACAAAAACAC-TTTTGATGA--TCTAGGA-TTAAGAAAG---AATTT-ATTATTTTTA--------------CGGCTGGTAATGCGGTCGTCTAAAAATCTT-AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCTGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAGC-GCCAGCTTTTTT----AATTAA----GAGATGGTAG-CTTGGTAGTGAGGGTTTT------------GCCATTTACCGTGGCTCCCTCGAAATGCATTAGTGCAT--CCATTTAAT--AGGCAAAGA-CGGACGAAAGCTCGAT-TTTTTCGCTCCC-CTCTTCCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGTGAAAGGGGGGAGCAA-GAGCTGGA-CGCAACGTCG----TTGCTGGTTGGA---GTGCTTCTGAACACCACCT 'Sporisorium themedae-arguentis' CTCGCACCTGT-CTAACTAAA-CTTGAGCTACCTTTTT----CAACACGG-TTGCATCGG-TAGAGTG-----------------------------------GCGAACGCGC--GTTCTTT----GACG-TGAGCTC--GCCCTCTACACT-----------------TTACACAAACAC-TTTTGATCT--TCTAGGA--TTTGAATG--------ACAATTTA-----------------TGACTGGTAATTCGGTCGTTTAAA--TTT--AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCTGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC--CATCCTTTTTTT-ATATATAGAA--AAAGGGTTGG-ATCGGTAGTGAGGGTTT-------------GCCATTCACCGTGGCTCCCTCGAAATACATTAGCGCAT--CCATTTGAT--AGGCAA-GAACGGACGAAAGCTCATC---TTTCGCTCT--CTCTTCCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGCGGAGAAA--GGGCAA-GAGCTGGA-CGCAACGATC----TTGCTGTTTGGC---GTGCTTCTGAACCCCGCCC Sporisorium_trachypogonicola CCCGCACCTGT-CCAACTAAA-ATAGGGCTACCCATT-----CAACACGG-TTGCATCGG-TCGGG-------CTTGTCAGAC--AGTGCGC-----------------ACAAAAGCGTGTTCTCGTCGGC---------AGCC---------------CGACACCAACGC--AAAGACAC-TTTTGATGA--CGTAGGA--TTTGAAAG-----TAAGCATTTTA-----------------CGGCTGGTAATGCGGTCGTCT---------AAAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GCGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCGGTTTGAGGGCCGCGAATCGTTTCGAAC--GTCGCTTTTTT----CAGGAAA----AGCTGGCGGG-TCGGTAGTGAGGGTTTTTT----------GCCATTTACCGTGGCTCCCTCGAAAAGCATTAGTGCAT--CCATTCGAT--AGGCAAAGA-CGGACGAAAGCTCGAC---CTTCGCTCT--TTCCACCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGCGAAGAAA--GAGCAA-GAGCTGGA-CGCAACGAC---TTTTGCTGGTTGGA---GTGCTTCTGAAAACCGCCC Sporisorium_veracruzianum CTCGCACCTGT-CTAACTAAA-CTTGAGCTACCAATTT----TAACACGG-TTGCATCGG-TTGG--------CCTGTCAAAC--AGTGCGCGAATGCGCATTGGGCGGCGGTCGACACT-----------------------------------------------TACAACACAAACAC-TTTTGATGA--TTTAGGA--TTTGAATGAAG----TTCATTTTT---ACG-ATGGAAC---CGACTGGTAATGCGGTCGTCTAAA--TCT-AAAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGGAC-GACAGCTTTTTTCTT--GCAAGA---AAGTTGGCGG-ATCGGTATTGAGGATTTT------------GCCATTTACCATGGCTTCCTCGAAAAGCATTAGCGCAT--CCATTTGAT--AGGCAA-GA-CGGACGAAAGCTTGTA---TTTCGCCTT-GTTCTTCCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGCGGAGACG--AGGTTC-GAGCTCGA-CGCAACGTT-----TTGCTGGTTGGA---GTGCTTCT-AACCCCGCCC Tolyposporium_junci TCCGCACCTGT-CCAACTAAA-CC-GGGCTACCACACAC---ACACACGG-TTGCATCGG-TCGG---------CTGTCAATT--AGTGC--------------------------------------------GAGGTCCCCTCGCGCTGAGAGGCGCCCGACGACAATTTAACAAACAC----TGATGACATTTAGGA-TTTGG-------------ACGTCTTT--------GATTGAAACGGCTGGTAATGCGGTCG--TATAA-TC--TAGAAATAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAAACGCGATAGGTAATGTGAATTGCAGAATGTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCTCCTGGACTTTCATCCGGAGAGCATGCCTGTCTGAGGGCCGCGAATTTCTTCGAGC-GACAGCTTTTTTCACAAA--------GGGCTGGCGG-ATCGGTTTTGAGGGGTT-------------GCCATTTGCACTGGCTCCCTCTAAATGCATTAGCTGGATTGCAGATCG-------------AGGATGGAAGGATATA------CGTCCCT-CTCCCTT----CGGATTTTGATAAT-TATCAAGAGA-CGAGGGTGATGGAAACTCCCCCGACCTCGGACTGTA--------TCGGTC-----------{AT}GGCTTCTCAAACCCGCCC Ustilago_affinis CTCGCACCTGT-CTAACTAAA--C{GT}GGGCTACCATTT{CT}----CAACACGG-TTGCACGGG-TAGG--------CCTGTCCATT--AGCG-------------------CGCAAGCGGTAAGAAGAC{AG}GGTTTTT----------------------------ACCACTTCAACACAAACAC-TTTTGATGA--TCTAGGA--TTTGAAGGAAG----TTCATTTT----ACG-ATGGAAC---CGACTGGTAATGCGGTCGTCTAAA--TCTAAAAAAATAACTTTGGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-GACCGCTTTTTTCTTT-GCAAAG---AAGTGGACGG-ATCGGTATTGAGGACTTT------------GCCATTCACAGTGGCTTCCTCGAAAAGCATTAGCGCAT--CCATTTGAT--AGGCGA-GA-CGGACGA{AG}AGCTTGTA--TTTTCGCTCT-GTTCGAACCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGCACAGACA--GAGTTC-GAGCTGGA-CGCAACGAC-----TTGCTGGTTGGA---GTGCTTCTTAACCTCGCCC Ustilago_avenae_F946 CTCGCACCTGT-CCAACTAAA-CTTGAGCTACCTTTTT----CAACACGG-TTGCATCGG-TCGG--------CCTGTCAAAC--AGTG----------------CGACGCAAGGAGAAAA-----TCCTCGCGTCTGCTGG---GCGACG--GACAGACAA------TTTTATTGAACACTTTTTGATGA--TCTAGGAA--TTGAAGGAGAAAA-GTC{AT}TTTT----ACAAATGAAAT---CGACTGGTAATGCGGTCGTCTAA---TTTT-AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCGGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-GACAGCTTTTTTCTTT-TGGAAA---AGGTTGACGG-ATCGGTATTGAGGGTTTTT-----------GCCATTAACCGTGGTTCCCT{GT}GAAATAGATTAGCGCAT--CCATTT-AT--AG-CAA-GA-CGGACGAAAGCTCGAT----TTTGCTCT--CTCTTCCCTGCCGGGTTTTGATAC--TATCAGGACTTCGGAGAGGTTGAGAT-GGGTAG-GAGCTTGA-CGCAACGGC-----TTGCTGTTTGGA---GTGCTTTTGAAACCCGCCC Ustilago_avenae_MP2362 CTCGCACCTGT-CCAACTAAA-CTTGAGCTACCTTTTT----CAACACGG-TTGCATCGG-TCGG--------CCTGTCAAAC--AGTG----------------CGACGCAAGGAGAAAA-----TCCTCGCGTCTGCTGG---GCGACG--GACAGACAA------TTTTATTGAACACTTTTTGATGA--TCTAGGA--TTTGAAGGAGAAAAAGTCATTTTT---ACAAATGAAAT---CGACTGGTAATGCGGTCGTCTAA---TTTT-AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-GACAGCTTTTTTCTTT-TGGAAA---AGGTTGACGG-ATCGGTATTGAGGGTTTTT-----------GCCATTTACCGTGGCTCCCTTGAAATAGATTAGCGCAT--CCATTTTAT--AGGCAA-GA-CGGACGAAAGCTCGAT---TTTTGCTCT--CTCTTCCCTGCCGGGTTTTGATAC--TATCAGGACTTCGGAGAGGTTGAGAT-GGGTAG-GAGCTCGA-CGCAACGGC-----TTGCTGTTTGGA---GTGCTTCTGAAACCCGCCC Ustilago_bullata CTCGCACCTGT-CCAACTAAA-CTTGAGCTACCTTTTTT---CAACACGG-TTGCATCGG-TCGG--------CCTGTCAAAC--AGTG----------------CGACGC-AAGGAGAAAATCCTTGTGTCTGCTGG-------GCGACGGACGGACAA--------TTTTATTTAACACTTTTGGATGA--TCTAGGA--TTTGAAGGAGAAAAAGTCATTTTT---ACGAATGAAAT---CGACTGGTAATGCGGTCGTCTAA---TTTT-AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATAGTTTCGAAC-GACAGCTTTTTTCTTT-TGGAAA---AGGTTGACGG-ATCGGTATTGAGGGTTTTT-----------GCCATTTACCGTGGCTCCCTCGAAATAGATTAGCGCAT--CCATTTTAT--AGGCAA-GA-CGGACGAAAGCTCGAT---TTTTGCTCT--CTCTTCCCTGCCGGGTTTTGATAC--TATCAGGACTTCGGAGAGGTTGAGAT-GGGTAG-GAGCTGGA-CGCAACGGC-----TTGCTGTTTGGA---GTGCTTCTGAAACCCGCCC Ustilago_bullata_GB CTCGCACCTGT-CCAACTAAA-CTTGAGCTACCTTTTTT---CAACACGG-TTGCATCGG-TCGG--------CCTGTCAAAC--AGTG----------------CGACGCAAGGAGAAAA-----TCCTTGCGTCTGCTGG---GCGACG--GACGGACAA------TTTTATTTAACACTTTTGGATGA--TCTAGGA--TTTGAAGGAGAAAAAGTCATTTTT---ACGAATGAAAT---CGACTGGTAATGCGGTCGTCTAA---TTTT-AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-GACAGCTTTTTTCTTT-TGGAAAA--AGGTTGACGG-ATCGGTATTGAGGGGTTTT-----------GCCATTTACCGTGGCTCCCTCGAAATAGATTAGCGCAT--CCATTTTAT--AGGCAA-GA-CGGACGAAAGCTCGAT---TTTTGCTCT--CTCTTCCCTGCCGGGTTTTGATAC--TATCAGGACTTCGGAGAGGTTGAGAT-GGGTAG-GAGCTGGA-CGCAACGGC-----TTGCTGTTTGGA---GTGCTTCTGAAACCCGCCC Ustilago_crameri CTCGCACCTGT-CTAACTAAA--CTGAGCTACCATTTT----CAACACGG-TTGCACGGG-TAGG--------CCTGTCGATT--AGTG---------------CGAACGCGC---TAGGAGACGGGTTTACCACT---------------------------------CAACACAAACAC-TTTTGATGA--TCTAGGA--TTTGAAGGAAA----TTCATTTT----ACG-ATGGAAC---CGACTGGTAATGCGGTCGTCTAAA--TCT-AAAAAATAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-GACCGCTTTTTTCTT--GTAAGA---AGGTGGACGG-ATCGGTATTGAGGACTTT------------GCCATTCACCGTGGCTTCCTCGAAAAGCATGAGCGCAT--CCATTTGAT--AGGCGA-GA-CGGACGAAAGCTTGTA--TTTTCGCTCT-GTTCTTACCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGCCAAGACA--GAGTTC-GAGCTGGA-CGCAACGAC-----TTGCTGGTTGGA---GTGCTTCT-AACCCCGCCC Ustilago_cynodontis CTCGCACCTGT-CTAACTAAA-CTTGAGCTACCATTTTTT--CAACACGG-TTGCATCGG-TTGG--------CCTGTCAATT--AGTG------------CGGCGG-CGCGAATTTACTTTG---CACCTGCCAAGCTAGGCGACG----GA-CCGACGC------CTTACTTTAAACAC-TTTTGATGA--TCTAGGA--TTTGAAGGATAAAAGTTCATTTTT---ACA-ATGAAAT---CGACTGGTAATGCGGTCGTCTAA---TTTT-AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-GACAACTTTTTTC-----ACAAA---GAGTTGGCGG-ATCGGTATTGAGGGTTTT------------GCCATTCACCGTGGCTCTCTCGAAATGCATTAGCGCAT--CCATTTGAT--AGGCAA-GA-CGGACGAAAGCTCCTC---TTTCGCTCT--CTCTTCCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGAGGTTGAGAT-GGGTACGGAGCTGGA-CGCAACGGC-----TTGCTGTTTGGA---GTGCTTCTGAAACCCGCCC Ustilago_cynodontis_GB CTCGCACCTGT-CTAACTAAA-CTTGAGCTACCATTTTTT--CAACACGG-TTGCATCGG-TTGG--------CCTGTCAATT--AGTG------------CGGCGG-CGCGAATTTACTTTG---CACCTGCCAAGCTAGGCGACG----GA-CCGACGC------CTTACTTTAAACAC-TTTTGATGA--TCTAGGA--TTTGAAGGATAAAAGTTCATTTTT---ACA-ATGAAAT---CGACTGGTAATGCGGTTGTCTAA---TTTT-AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-GACAACTTTTTTC-----ACAAA---GAGTTGGCGG-ATCGGTATTGAGGGTTTT------------GCCATTCACCGTGGCTCTCTCGAAATGCATTAGCGCAT--CCATTTGAT--AGGCAA-GA-CGGACGAAAGCTCCTC---TTTCGCTCT--CTCTTCCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGAGGTTGAGAT-GGGTACGGAGCTGGA-CGCAACGGC-----TTGCTGTTTGGA---GTGCTTCTGAAACCCGCCC Ustilago_echinata CTCGCACCTGT-CCAACTAAA-CTTGAGCTACCCAATTTTT-CAACACGG-TTGCATCGG-TTGG---------CTGTCCAAC--AGTGCGCGGTGGGCACGCAAACGAATTTTTTCGAAATTGGTTTTGCATTGCTCGCTTTGTGCTGGGAAGGCGGTCGACACCAA-TTTACAAAACAC-TTTTGATGA--TCTAGGA-TTTTGAATGAAAG---TTCATTTTT---ATG-ATGGAAC---CGACTGGTAATGCGGTCGTCTAAA--TCT-AAAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-GACGGCTTTCTTCCAT-GTGAAGA--GAGTTGGCGG-ATCGGTATTGAGGGTTCTT-----------GCCATTCACCGTGGCTCCCTCGAAATGCATTAGCGCAT--CCATTCAAT--AGGCAA-GA-CGGACGAAAGCTTGAT---TTTCGCCCCTCGTCTTCCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGGGGTGGAGAGGTTGGGTTGGGAGCTGGA-CGCGACGTT-----TTGCTGGTTGGA---GTGCTTCTGAACCCCACCC Ustilago_esculenta CTCGCACCTGT-CTAAATAAA-CTTGAGCTACCCAATTT---CAACACGG-TTGCATCGG-TTAG---------CTGTCAGAC--AGCGCGGACAGAGATTTTTTTTTTTTCTCTGCTCGCTGCTGGGAAGGCGGTCGA--------------------------CACAATACACAAACAC-TTTTGATGA--TCTAGGA--TTTGAATGAAAG---TTCATTTTT---ATG-ATGGAAC---CGACTGGTAATGCGGTCGTCTAAA--TCT-AAAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-GACAGCTTTCTTCTT--TGCAAGA--GAGTTGGCGG-ATCGGTAATGAGGGTTTTT-----------GCCATTTACCGTGGCTCCCTCGAAATGCATTAGCGCAT--CCATTCAAT--AGGCAA-GA-CGGACGAAAGCTTGAA---TTTCGCCCT--CTCTTTCCTGCCGGGTTTTGATAA--TATCAGGGCTTCGGAGGCAGAGAGAT-GGGTTA-GAGCTGGA-CGCAACGTT-----TTGCTGGTTGGA---GTGCTTCTGAAACCCGCCC Ustilago_hordei CTCGCACCTGT-CCAACTAAA-CTTGAGCTACCTTTTT----CAACACGG-TTGCATCGG-TCGG--------CCTGTCAAAC--AGTG----------------CGACGCAAGGAGAAAA-----TCCTCGCGTCTGCTGG---GCGACG--GACAGACAA------TTTTATTGAACACTTTTTGATGA--TCTAGGA--TTTGAAGGAGAAAAAGTCATTTTT---ACGAATGAAAT---CGACTGGTAATGCGGTCGTCTAA---TTTT-AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-GACAGCTTTTTTCTTT-TGGAAA---AGGTTGACGG-ATCGGTATTGAGGGTTTTT-----------GCCATTTACCGTGGCTCCCTTGAAATAGATTAGCGCAT--CCATTTTAT--AGGCAA-GA-CGGACGAAAGCTCGAT---TTTTGCTCT--CTCTTCCCTGCCGGGTTTTGATAC--TATCAGGACTTCGGAGAGGTTGAGAT-GGGTAG-GAGCTCGA-CGCAACGGC-----TTGCTGTTTGGA---GTGCTTCTGAAACCCGCCC Ustilago_hordei_GB CTCGCACCTGT-CCAACTAAA-CTTGAGCTACCTTTTT----CAACACGG-TTGCATCGG-TCGG--------CCTGTCAAAC--AGTG----------------CGACGCAAGGAGAAAA-----TCCTCGCGTCTGCTGG---GCGACG--GACAGACAA------TTTTATTGAACACTTTTTGATGA--TCTAGGA--TTTGAAGGAGAAAAAGTCATTTTT---ACGAATGAAAT---CGACTGGTAATGCGGTCGTCTAA---TTTT-AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-GACAGCTTTTTTCTTT-TGGAAA---AGGTTGACGG-ATCGGTATTGAGGGTTTTT-----------GCCATTTACCGTGGCTCCCTTGAAATAGATTAGCGCAT--CCATTTTAT--AGGCAA-GA-CGGACGAAAGCTCGAT---TTTTGCTCT--CTCTTCCCTGCCGGGTTTTGATAC--TATCAGGACTTCGGAGAGGTTGAGAT-GGGTAG-GAGCTCGA-CGCAACGGC-----TTGCTGTTTGGA---GTGCTTCTGAAACCCGCCC Ustilago_maydis CTCGCACCTGT-CCAACTAAA-CCTGAGCTACCTTTTTTATATAACACGG-TTGCATCGG-TCGGT--------CTGTCGAAACCAGTA------GCGCTCATA-GCGAGCAGCGTCTGGGGAAAGACGGGTCGGCGCT-----------------------------TCTTACC-AACAC-TTTTGAACA---CTAGGA--TTGGAAGGACAAAAA-TCATTTTTTTGATG-ATGGAAG---CGACTGGTAATGCGGTCGTCTAAA--TTG-AAAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATTTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-GACAGCTTTTTTTTCTTGTTGAGAAAGAGCTGGCGG-ATCGGTAGTGAGGGTCTCT-----------GCCATTTACCGTGGCTCCCTCGAAATGCATTAGCGCAT--CCATTGGAA-GGCGGAAAGA-CGGACGAAAGCTCGAGTTTTTTTGCCCT--CGCTTCCCTGCCGGGTTTTGATAA--TGTCAGGACTTCGGAGGCGAAGAGA--GGGCGG-GAGCTGGA-CGCAACGAC-TTTTCTGCTGTTTGGC---GTGCTTCTGAACCCCGCCC Ustilago_maydis_GB CTCGCACCTGT-CCAACTAAA-CCTGAGCTACCTTTTTTATATAACACGG-TTGCATCGG-TCGGT--------CTGTCGAAACCAGTA------GCGCTCATA-GCGAGCAGCGTCTGGGGAAAGACGGGTCGGCGCT-----------------------------TCTTACC-AACAC-TTTTGAACA---CTAGGA--TTGGAAGGACAAAAA-TCATTTTTTTGATG-ATGGAAG---CGACTGGTAATGCGGTCGTCTAAA--TTG-AAAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATTTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-GACAGCTTTTTTTTCTTGTTGAGAAAGAGCTGGCGG-ATCGGTAGTGAGGGTCTCT-----------GCCATTTACCGTGGCTCCCTCGAAATGCATTAGCGCAT--CCATTGGAA-GGCGGAA-GA-CGGACGAAAGCTCGAG-TTTTTTGCCCT--CGCTTCCCTGCCGGGTTTTGATAA--TGTCAGGACTTCGGAG-CGAAGAGA--GGGCGG-GAGCTGGAACGC-ACGAACTTTTCTGCTGTTTGGGC--GTGCTTCTGAACCCCGCCC Ustilago_nuda_GB CTCGCACCTGT-CCAACTAAA-CTTGAGCTACCTTTTT----CAACACGG-TTGCATCGG-TCGG--------CCTGTCAAAC--AGCG----------------CGACGCAAGGAGAAAA-----TCCTCGCGTCTGCTGG---GCGACG--GACAGACAA------TTTTATTGAACACTTTTTGATGA--TCTAGGA--TTTGAAGGAGAAAAAGTCATTTTT---ACGAATGAAAT---CGACTGGTAATGCGGTCGTCTAA---TTTT-AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-GACAGCTTTTTTCTTT-TGGAAA---AGGTTGACGG-ATCGGTATTGAGGGTTTTT-----------GCCATTTATCGTGGCTCCCTTGAAATAGATTAGCGCAT--CCATTTTAT--AGGCAA-GA-CGGACGAAAGCTCGAT---TTTTGCTCT--CTCTTCCCTGCCGGGTTTTGATAC--TATCAGGACTTCGGAGAGGTTGAGAT-GGGTAG-GAGCTCGA-CGCAACGGC-----TTGCTGTTTGGA---GTGCTTCTGAAACCCGCCC Ustilago_pamirica CTCGCACCTGT-CCAACTAAA-CTTGAGCTACCTTTTTT---CAACACGG-TTGCATCGG-TCGG--------CCTGTCAAAC--AGTG----------------CGACGCAAGGAGAAAA-----TCCTCGCGTCTGCTGG---GCGATG--GACGGACAA------TTTTATTTAACACTTTTGGATGA--TCTAGGA--TTTGAAGGAGAAAAAGTCATTTTT---ACGAATGAAAT---CGACTGGTAATGCGGTCGTCTAA---TTTT-AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-GACAGCTTTTTTCTTT-TGGAAA---AGGTTGACGG-ATCGGTATTGAGGGTTTTT-----------GCCATTTACCGTGGCTCCCTCGAAATAGATTAGCGCAT--CCATTTTAT--AGGCAA-GA-CGGACGAAAGCTCGAT---TTTTGCTCT--CTCTTCCCTGCCGGGTTTTGATAC--TATCAGGACTTCGGAGAGGTTGAGAT-GGGTAG-GAGCTGGA-CGCAACGGC-----TTGCTGTTTGGA---GTGCTTCTGAAACCCGCCC Ustilago_schroeteriana CTCGCACCTGT-CTAACTAAA-CTTGAGCTACTCACTTTT--CAACACGG-TTGCATCGG-TTGG---------CTGTCAAAC--AGTG------CGCGGCACGCATCTTGCGTTGCTGTCCAAAGCTGGGAAGGCGGTCGACACA---------------------CACAACACAAACCC-TTTTGATGA--TCTAGGA-TTTTGAATGAAG----TTCATTTTTTTTACG-ATGGAAC---CGACTGGTAATGCGGTCGTCTAAA--TCT-AAAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-GGCAGCTTTTTTCTTTTGCGAAA---AAGTTGGCGG-ATCGGTATTGAGGGTCTTT-----------GCCATGTACCATGGCTCCCTCGAAATGCATTAGCGCAT--CCATTTGAT--AGGCAA-GA-CGGACGAAAGCTCGAA---TTTCGCCCT--CTCTTCCCTGCCGGGTTTTGATACACTATCAGGACTTCGGAGGCGGAGAAA--GGGGTA-GAGCCGGA-CGCAACGTT-----TTGCTGTTTGGA---GTGCTTCTGAAACCCGCCC Ustilago_scitaminea CTCGCACCTGT-CTAACTAAA--CTGGGCTACCTATTT----CAACACGG-TTGCATCGG-TTGGGT-------CTGCCAAAC--AGTG-------------------CACGAAAGTACCTGTGGAGGCAGCCCG-----------------------------ATAATCTACCAAAACAC-TTTTGATGG--TCTAGGA--TTTGAAAG--TATTTAACATTTTA-----------------CGACTGGTAATGCGGTCGTCTAAAA-TCT-AAAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCTTGCAGATCTAATCTGGGGAGCATGCCTATTTGAGGGCCGCGAATTGTTTCGAACGCAC-GCTTTTTT-----ATTACGAAAGAGCTGGCGG-ATCGGTAGTGAGGGTTTT------------GCCATTTACCGTGGCTCCCTCGAAATGCATTAGTGCAT--CCATTTGAC--AGGCAAAGA-CGGACGAAGGCTCGAC--TTTTGGCCC---ATCTTCCCTGCCAGGTTTTGATAA--TATCAGGACTTTGGTGGTGAGGAT---GAGCAAGAAGCTGGA-CGCGACGGCC---TTTGCTGATTGGA---GTGCTTCTGAACACCGCCC Ustilago_scitaminea_GB CTCGCACCTGT-CTAACTAAA--CTGGGCTACCTATTT----CAACACGG-TTGCATCGG-TTGGGT-------CTGCCAAAC--AGTG-------------------CACGAAAGTACCTGTGGAGGCAGCCCG-----------------------------ATAATCTACCAAAACAC-TTTTGATGG--TCTAGGA--TTTGAAAG--TATTTAACATTTTA-----------------CGACTGGTAATGCGGTCGTCTAAAA-TCT-AAAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCTTGCAGATCTAATCTGGGGAGCATGCCTATTTGAGGGCCGCGAATTGTTTCGAACGCAC-GCTTTTTT-----ATTACGAAAGAGCTGGCGG-ATCGGTAGTGAGGGTTTT------------GCCATTTACCGTGGCTCCCTCGAAATGCATTAGTGCAT--CCATTTGAC--AGGCAAAGA-CGGACGAAGGCTCGAC--TTTTGGCCC---ATCTTCCCTGCCAGGTTTTGATAA--TATCAGGACTTTGGTGGTGAGGAT---GAGCAAGAAGCTGGA-CGCGACGGCC---TTTGCTGATTGGA---GTGCTTCTGAACACCGCCC Ustilago_sparsa CTCGCACCTGT-CTAACTAAA-CTTGAGCTACCTTTTTT---CAACACGG-TTGCATCGG-TTGG--------CCTGTCAAAC--AGTG------------CGGCGGTCGCGAAATTGATTTTTCGCAGCTGCCCAACTCGGCGACG------GACCGACAC-----TTTTTACCAAACAC-TTTTGATGA--TCTAGGA--TTTGAATGAGAAAAGTTCATTTTT---ACAAATGAAAT---CGACTGGTAATGCGGTCGTCTAA---TTTTTAAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-GACAACTTTTTTC-----ACAAA---GAGTTGGCGG-ATCGGTATTGAGAGTTTTTTT---------GCCATTCACCGTGGCTCTCTCGAAATGCATTAGCGCAT--CCATTTGAT--AGGCAA-GA-CGGACGAAAGCTCATC--TTTTCGCTCT--CTCTTCCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGAGGTTGAGAT-GGGTAC-GAGCTGGA-CGCAACGAC-----TTGCTGTTTGGA---GTGCTTCTGAAACCCGCCC Ustilago_trichophora CTCGCACCTGT-CCAACTAAA-CTTGAGCTACCCAATTT---CAACACGG-TTGCATCGG-TTGG---------CTGTCAAAC--AGTG--------------CCTCGGCGCTGGGAGGCGGTCGA---------------------------------------CACACAACACAAACAC-TTTTGATGA--TCTAGGA-TTTTGAATGAAG----TTCATTTTT---ATG-ATGGAAC---CGACTGGTAATGCGGTCGTCTAAA--TCT-AAAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-GACAGCTTTTTTCTTT-GCGAAA---AAGTTGGCGG-ATCGGTATTGAGGGTTTTT-----------GCCATTTACCATGGCTCCCTCGAAATGCATTAGCGCAT--CCATTTGAT--AGGCAA-GA-CGGACGAAAGCTCGAT---TTTCGCCCT--CTCTTCCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGCGGAGAAA--GGGTTA-GAGCTGGA-CGCGACGTT-----TTGCTGTTTGGA---GTGCTTCTGAAACCCGCCC Ustilago_tritici_GB CTCGCACCTGT-CCAACTAAA-CTTGAGCTACCTTTTTT---CAACACGG-TTGCATCGG-TCGG--------CCTGTCAAAC--AGTG----------------CGACGCAAGGAGAAAA-----TCCTCGCGTCTGCTGG---GCGACG--GACGGACAA------TTTTATTTAACACTTTTGGATGA--TCTAGGA--TTTGAAGGAGAAAAAGTCATTTTT---ACGAATGAAAT---CGACTGGTAATGCGGTCGTCTAA---TTTT-AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-GACAGCTTTTTTCTTT-TGGAAA---AGGTTGACGG-ATCGGTATTGAGGGTTTTT-----------GCCATTTACCGTGGCTCCCTCGAAATAGATTAGCGCAT--CCATTTTAT--AGGCAA-GA-CGGACGAAAGCTCGAT---TTTTGCTCT--CTCTTCCCTGCCGGGTTTTGATAC--TATCAGGACTTCGGAGAGGTTGAGAT-GGGTAG-GAGCTGGA-CGCAACGGC-----TTGCTGTTTGGA---GTGCTTCTGAAACCCGCCC Ustilago_turcomanica CTCGCACCTGT-CCAACTAAA-CTTGAGCTACCTTTTTT---CAACACGG-TTGCATCGG-TCGG--------CCTGTC-ACC--AGTG----------------CGACGCAAGGAGAAAA-----TCCTTGCGTCTGCTGG---GCGACG--GACGGACAA------TTTTATTTAACACTTTTGGATGA--TCTAGGA--TTTGAAGGAGAAAAAGTCATTTTT---ACGAATGAAAT---CGACTGGTAATGCGGTCGTCTAA---TTTT-AAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-GACAGCTTTTTTCTTT-TGGAAA---AGGTTGACGG-ATCGGTATTGAGGGTTTTT-----------GCCATTTACTGTGGCTCCCTCGAAATAGATTAGCGCAT--CCATTTTAT--AGGCAA-GA-CGGACGAAAGCTCGAT---TTTTGCTCT--CTCTTCCCTGCCGGGTTTTGATAC--TATCAGGACTTCGGAGAGGTTGAGAT-GGGTAG-GAGCTGGA-CGCAACGGC-----TTGCTGTTTGGA---GTGCTTCTGAAACCCGCCC Ustilago_vetiveriae CTCGCACCTGT-CCAACTAAA-CTTGAGCTACCTTTTTT----AACACGG-TTGCATCGG-TCGG--------CCTGTCAAAC--AGCG--------------CGAAAAGAGAAAAATCTTCCCTTTCGCGGTTGGGCGACGAGTCGGCACT-----------------TTACACAAACAC-TTTTGATAA--TCTAGGA--TTTGAATGAAAG---TTCATTTTT---ATG-ATGGATC---CGACTGGTAATGCGGTCGTCTAAA--TCT-AAAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-GACAGCTTTTTTCTTTCATGGGAAA-AGGTTGGCGG-ATCGGTATTGAGGGTT--------------GCCATTTACCATGGCTCCCTCGAAATGCATTAGCGCAT--CCATTTGAT--AGGCAAAGA-CGGACGAAAGCTCGAT---TTTCGCCCT--TTCTTCCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGGCTGGAGGAA-GGGTTA-GAGCTGGA-CGCGACGAC----TTTGCTGTTTGGA---GTGCTTCTGAACCCCGCCC Ustilago_xerochloae TTCGCACCTGT-CCAACTAAA-CTTGAGCTACCTTTTTT---CAACACGG-TTGCATCGG-TTGG--------CCTGTCAAAC--AGTG----CGGCGG---------CGCGAATGG----ATTTATTTATTTTCGCGTCCGCTTGCTGGG--CGACGGACCGACACTTTTTACCAAACAC-TTTTGATGA--TCTAGGA--TTTGAATGAGAAAAGTTCATTTTT---ACAAATGAAAT---CGACTGGTAATGCGGTCGTCTAA---TTTTTAAAAACAACTTTTGGCAACGGATCTCTTGGTTCTCCCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAA-GTGAATCATCGAATCTTTGAACGCACC-TTGCGCTCCCGGCAGATCTAATCTGGGGAGCATGCCTGTTTGAGGGCCGCGAATTGTTTCGAAC-GACGACTTTTTTCTT--GCAAAA---GAGTTGGCGG-ATCGGTATTGAGGGTTTT------------GCCATTCACCGTGGCTCTCTCGAAATGCATTAGCGCAT--CCATTTGAT--AGGCAA-GA-CGGACGAAAGCTCATC---TTTCGCTCT--CTCTTCCCTGCCGGGTTTTGATAA--TATCAGGACTTCGGAGAGGTTGAGAT-GGGTAC-GAGCTGGA-CGCAACGGC-----TTGCTGTTTGGA---GTGCTTCTGAAACCCGCCC ; END; BEGIN TREES; TITLE Tb6669; LINK TAXA = Taxa1; TRANSLATE 1 Cintractia_axicola, 2 Farysia_chardoniana, 3 Sorosporium_tumefaciens, 4 Sporisorium_aegypticum, 5 Sporisorium_catharticum, 6 Sporisorium_cenchri, 7 Sporisorium_chrysopogonis, 8 Sporisorium_cruentum, 9 Sporisorium_culmiperdum, 10 Sporisorium_destruens, 11 Sporisorium_destruens_GB, 12 'Sporisorium dimeriae-ornithopodae', 13 Sporisorium_fastigiatum, 14 Sporisorium_formosanum, 15 Sporisorium_holwayi, 16 Sporisorium_lepturi, 17 Sporisorium_mishrae, 18 Sporisorium_moniliferum, 19 Sporisorium_occidentale, 20 'Sporisorium panici-leucophaei', 21 'Sporisorium paspali-notati', 22 Sporisorium_polliniae, 23 Sporisorium_provinciale, 24 Sporisorium_pseudechinolaenae, 25 Sporisorium_puellare, 26 Sporisorium_reilianum_GB, 27 Sporisorium_sorghi_GB, 28 'Sporisorium themedae-arguentis', 29 Sporisorium_trachypogonicola, 30 Sporisorium_veracruzianum, 31 Tolyposporium_junci, 32 Ustilago_affinis, 33 Ustilago_avenae_F946, 34 Ustilago_avenae_MP2362, 35 Ustilago_bullata, 36 Ustilago_bullata_GB, 37 Ustilago_crameri, 38 Ustilago_cynodontis, 39 Ustilago_cynodontis_GB, 40 Ustilago_echinata, 41 Ustilago_esculenta, 42 Ustilago_hordei, 43 Ustilago_hordei_GB, 44 Ustilago_maydis, 45 Ustilago_maydis_GB, 46 Ustilago_nuda_GB, 47 Ustilago_pamirica, 48 Ustilago_schroeteriana, 49 Ustilago_scitaminea, 50 Ustilago_scitaminea_GB, 51 Ustilago_sparsa, 52 Ustilago_trichophora, 53 Ustilago_tritici_GB, 54 Ustilago_turcomanica, 55 Ustilago_vetiveriae, 56 Ustilago_xerochloae; TREE Fig._1 = [&R] (1,(2,31),((((((((9,15),(((13,26),24),12,16),((21,29,25),19)),((18,27),8)),(50,49)),((((3,(((11,10),14),20)),6),5,(7,(22,28))),17,23)),(45,44)),(4,(((35,36,47,53,54),((33,34),43,42,46)),(56,((38,39),51))))),((37,32),30),(40,41),(48,52),55)); END; BEGIN TREES; TITLE Tb6670; LINK TAXA = Taxa1; TRANSLATE 1 Cintractia_axicola, 2 Farysia_chardoniana, 3 Sorosporium_tumefaciens, 4 Sporisorium_aegypticum, 5 Sporisorium_catharticum, 6 Sporisorium_cenchri, 7 Sporisorium_chrysopogonis, 8 Sporisorium_cruentum, 9 Sporisorium_culmiperdum, 10 Sporisorium_destruens, 11 Sporisorium_destruens_GB, 12 'Sporisorium dimeriae-ornithopodae', 13 Sporisorium_fastigiatum, 14 Sporisorium_formosanum, 15 Sporisorium_holwayi, 16 Sporisorium_lepturi, 17 Sporisorium_mishrae, 18 Sporisorium_moniliferum, 19 Sporisorium_occidentale, 20 'Sporisorium panici-leucophaei', 21 'Sporisorium paspali-notati', 22 Sporisorium_polliniae, 23 Sporisorium_provinciale, 24 Sporisorium_pseudechinolaenae, 25 Sporisorium_puellare, 26 Sporisorium_reilianum_GB, 27 Sporisorium_sorghi_GB, 28 'Sporisorium themedae-arguentis', 29 Sporisorium_trachypogonicola, 30 Sporisorium_veracruzianum, 31 Tolyposporium_junci, 32 Ustilago_affinis, 33 Ustilago_avenae_F946, 34 Ustilago_avenae_MP2362, 35 Ustilago_bullata, 36 Ustilago_bullata_GB, 37 Ustilago_crameri, 38 Ustilago_cynodontis, 39 Ustilago_cynodontis_GB, 40 Ustilago_echinata, 41 Ustilago_esculenta, 42 Ustilago_hordei, 43 Ustilago_hordei_GB, 44 Ustilago_maydis, 45 Ustilago_maydis_GB, 46 Ustilago_nuda_GB, 47 Ustilago_pamirica, 48 Ustilago_schroeteriana, 49 Ustilago_scitaminea, 50 Ustilago_scitaminea_GB, 51 Ustilago_sparsa, 52 Ustilago_trichophora, 53 Ustilago_tritici_GB, 54 Ustilago_turcomanica, 55 Ustilago_vetiveriae, 56 Ustilago_xerochloae; TREE Fig._2 = [&R] (1,((2,31),(((((9,15),(((21,25),29),19)),((26,24),(12,16))),(((18,27),8),(50,49))),((((4,((((((35,36),54),53),47),((33,34),((43,46),42))),(56,((38,39),51)))),(45,44)),((((37,32),30),((40,41),(48,52))),55)),((3,(((5,(7,28)),((((11,10),14),20),22)),6)),(17,23)))))); END;