#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 26, 2024; 20:46 GMT TreeBASE (cc) 1994-2008 Study reference: Bremer B., & Jansen R.K. 1991. Comparative restriction site mapping of chloroplast DNA implies new phylogenetic relationships within Rubiaceae. American Journal of Botany, 78(2): 198-213. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S11305] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=33; TAXLABELS Antirhea_lucida Bouvardia_glaberrima Calycophyllum_candidissimum Catesbaea_spinosa Cephalanthus_occidentalis Chiococca_alba Cinchona_succirubra Coccocypselum_hirsutum Coffea_arabica Coprosma_pumila Coutarea_latiflora Enterospermum_coriaceum Erithalis_fruticosa Exostema_caribaeum Galium_odoratum Gardenia_thunbergia Guettarda_uruguensis Haldina_cordifolia Hamelia_cuprea Hoffmannia_refulgens_x_ghiesbre Hydnophytum_formicarum Ixora_parviflora Luculia_grandifolia Mitriostigma_axillare Mussaenda_erythrophylla Myrmecodia_platyrea Nertera_granadensis Pentas_lanceolata Pinckneya_pubens Pogonopus_speciosus Psychotria_bacteriophila Rogiera_suffrutescens Vangueria_madagascariensis ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M8179] TITLE Table_5; LINK TAXA = Taxa1; DIMENSIONS NCHAR=161; FORMAT DATATYPE=Standard SYMBOLS= "0 1" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 ] [ . . . . . . . . . . . . . . . . ] Antirhea_lucida 001111011001010101111111001000000100101011010010000101001010001111000010010111000010001110111000010000110100010111110000100100101000110?10000000000101011100111?0 Bouvardia_glaberrima 0??10000010100001000000001000000011100???001110000010010000101000100001011010110101100000000100000000111000100011110100000010100011010110100000001100?0000?011001 Calycophyllum_candidissimum 00111101000101011111110010001000110010101001000000010100100000110010010101011001001010011011100010000111110001011111011000000010101011011000100010010101011010110 Catesbaea_spinosa 00111101100101010110110?01000000010010011001000000110100101000111000001001011100001001110111100000010011010001011111001000010010001011010000000000010101100011110 Cephalanthus_occidentalis 00110011100101000110111010100000010010001001000000000100101000111110001001011100001000111011100001000010010001011111000000010010001011011000000000011101110011110 Chiococca_alba 00111101000100010100000001000000010011001001000000100000101000111110001001011100001001010001101001001011010001010111000000010010001011011000010000010101110011110 Cinchona_succirubra 00110101100101010111111010101000010010001001000000010100101000111110001001011101001000111011100001000011010001011111000000010000001011011000000000011101010111110 Coccocypselum_hirsutum 000??101010001001011110?000001010111001000010100000100100100010000000010110110100010000100011000000001110100100111100000000100000?10110101000000010000000?0011010 Coffea_arabica 10111101000011011110110010000000010010010000000011010100100000111011100101001100001000111011100000010111100000111111001000010010001011000000100100010101000011110 Coprosma_pumila 010??10101010001101011000010000101110010001100000001001000010100000000001001011010110001000?0100000001111001100110001000000100100110101100110000010000000?0011001 Coutarea_latiflora 00110101100001010111111000000000010011001001000001110100101000001100001001011100001000110011101001001011010001011110011000000010001011011000000000010101110011110 Enterospermum_coriaceum 10111101000011011110110010000000010010011000000111010100100000000011100101011100000000111011100000000111110000111111001000100010001011000000100000010101001011110 Erithalis_fruticosa 00111101000100010111101000000000010011001001000000100000101000111110001001011100001001010001101001001011010001010111000000010010001011011000010000010101110011110 Exostema_caribaeum 00111101100101010111111001000000010011001001000000110100101000111110001001011100001001110011101001001011010001011111000000010010001011000000000000010101110011110 Galium_odoratum 00010001001100001010110000100001011100100011110000010010000101000000001010010110100100010001100000010111000100011110100000010100010010110100000001000000000011001 Gardenia_thunbergia 10111001000001011110110?01000000010010000000000111010100100010110011100101011100001000011011100000010111110000111111001000010010001011010000100100010101001011101 Guettarda_uruguensis 00111101100101010111111100100000010010101101001000010100101000?111000010010111000010001110101000010000110100010111110000100100101000110?1000000000010101100011110 Haldina_cordifolia 00111011100100000110111010?00000010010001001000000010100101000111110001001011100001000111011100001000010010001011111000000010011001011011000000000011101110011110 Hamelia_cuprea 01011101100101010100011100100010010010101001010000010100101000001100001001011100010010111001100000??0011010001011111000101010010001011011000000000010101110011010 Hoffmannia_refulgens_x_ghiesbre 01011101100100010100111100100000010010101001000000010100101000110100001001011100010010111010100000??0011010001011111000101010010001011011000000000010101100011010 Hydnophytum_formicarum 0001010100110111101111000?000111101100100001100000001011000001000000001010101110000000010011100100100101111000001110000000101100011101000100001001000010000001010 Ixora_parviflora 10111101000000011111110010000000010010001001000111000100100000110010000101101100001000111001100000010111110001011111001000100010001011000000100000010001001011110 Luculia_grandifolia 0011110110010001111111101010100001001000100100000000010010000000111000100101110000100011111110000000011101000???1111000000010010001011011000000000010100010011110 Mitriostigma_axillare 10101101000011001110110010000000010010010000000101010100100010110011100101011100001000111011100000010111110000111111001000010010001011000000100100010101001011110 Mussaenda_erythrophylla 00110101000101011111110010001000010010011001000000010100100000000010010101011101001010011111100000000111110001011111000010010011001011011000100000010100001011110 Myrmecodia_platyrea 00010101001101111011110000010111101100100001100000001011000001000000001010101110000000010011100100100101111000001110000000101100011101000100001001000010000001010 Nertera_granadensis 010??10101010001101011000000100101110010001101000001001000010100000000101001011010110001000?0100000001111001100110001000001001000110101100110000010000000?0011001 Pentas_lanceolata 00000101010100011011000000000101011100100001010000000010010101010000001001010110101100000001100000000111100101011110100000010110011010110011000001100?00000011001 Pinckneya_pubens 10110101000101011111110010011000110010101001000001010100100000110010010101011001001010011111100010000111110001011111011000000010001011011000100010010101011010110 Pogonopus_speciosus 10111100000101011111110010011000110010101001000001010100100000010010010101011001001010011111100010000111110001011111011000000010001011011000100010010101011010110 Psychotria_bacteriophila 00010101001101010011110000110111101100100001100000001011001001000000001010101110000010010001100100100101111000001110000000100000011101000100001001000000000001010 Rogiera_suffrutescens 00111101100101010111111010101000010010001001000000010100101000111110001001011100001001111011100001000011010001011111000000010010001011011000000000010101010111100 Vangueria_madagascariensis 1011110100000101111111001100000001001001000100011101010010000011001000010101110000100011101110000001011101000101111100100001001000101100000010010001000100?011110 ; END; BEGIN TREES; TITLE S11x5x95c20c33c35; LINK TAXA = Taxa1; TRANSLATE 1 Antirhea_lucida, 2 Bouvardia_glaberrima, 3 Calycophyllum_candidissimum, 4 Catesbaea_spinosa, 5 Cephalanthus_occidentalis, 6 Chiococca_alba, 7 Cinchona_succirubra, 8 Coccocypselum_hirsutum, 9 Coffea_arabica, 10 Coprosma_pumila, 11 Coutarea_latiflora, 12 Enterospermum_coriaceum, 13 Erithalis_fruticosa, 14 Exostema_caribaeum, 15 Galium_odoratum, 16 Gardenia_thunbergia, 17 Guettarda_uruguensis, 18 Haldina_cordifolia, 19 Hamelia_cuprea, 20 Hoffmannia_refulgens_x_ghiesbre, 21 Hydnophytum_formicarum, 22 Ixora_parviflora, 23 Luculia_grandifolia, 24 Mitriostigma_axillare, 25 Mussaenda_erythrophylla, 26 Myrmecodia_platyrea, 27 Nertera_granadensis, 28 Pentas_lanceolata, 29 Pinckneya_pubens, 30 Pogonopus_speciosus, 31 Psychotria_bacteriophila, 32 Rogiera_suffrutescens, 33 Vangueria_madagascariensis; TREE Fig._2 = [&R] (23,((7,32),((5,18),(((((13,6),14),11),((((((30,29),3),25),((33,22),(12,(9,(24,16))))),((((28,(27,10)),(2,15)),8),(31,(21,26)))),4)),((17,1),(19,20)))))); TREE Fig._3 = [&R] (23,((7,32),((5,18),(((((13,6),14),11),((((((30,29),3),25),(33,22,(12,9,24,16))),((((28,(27,10)),(2,15)),8),(31,(21,26)))),4)),((17,1),(19,20)))))); TREE Fig._4 = [&R] (23,(((7,32),(5,18)),(((((13,6),14),11),4),(((((30,29),3),25),((33,22),((12,(9,24)),16))),(((17,1),(19,20)),((((28,(27,10)),(2,15)),8),(31,(21,26)))))))); END;