#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 20, 2024; 4:16 GMT TreeBASE (cc) 1994-2008 Study reference: Meerow A., & Van der werff H. 2004. Pucara (Amaryllidaceae) reduced to synonomy with Stenomesson on the basis of nuclear and plastid DNA spacer sequences, and a new related species of Stenomesson. Systematic Botany, null. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S1130] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=18; TAXLABELS Chlidanthus_fragrans Clinanthus_humilis Clinanthus_incarnatus Clinanthus_mirabilis Eucharis_castelnaeana Eucharis_formosa Eucrosia_dodsonii Eustephia_darwinii Hymenocallis_chiapasiana Hymenocallis_glauca Hymenocallis_latifolia Hymenocallis_tubiflora Ismene_vargasii Pucara_leucantha Stenomesson_aurantiacum Stenomesson_chloranthum Stenomesson_latifolium Stenomesson_miniatum ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M2400] TITLE 'atpB-rbcL spacer & gap matrix'; LINK TAXA = Taxa1; DIMENSIONS NCHAR=1406; FORMAT DATATYPE=DNA SYMBOLS= "0 1 G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 1390 1400 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Chlidanthus_fragrans ????00TTTG0G1G0TG1G111T0GGTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTT-TTT-G0TTGG00T0GT0-----TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT100---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00-----TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT0G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT10TTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTGG00TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1T-GTT1TTT-0TTTT-1TTT-0TTT1TTTT0TTTT1TTTTT001T001T0T00T0T0T0---------------------------------T0----GTT0GTT0T0--------------------------------------------T000GT0T000G0T00GTT--1T0T0T0T0T0-----G001TT0T--------------------------1-T0----T000T------------------0T0T0----------------------------G0000TTTT-T1T1T0T0T--001T0T0T0G0T0GTT0GT0T001T0T0T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTT0G0TT10000-------T00G000TGG1T100TT0T000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTT----G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGTG0G00TT1TT00TT10TG0G-TTGT0GGG0GGG-01TT0TGT10110100010G0G01T000G11111111111111110010111111111011101111111111100000000000000000000000000000000000000000000000000000000000000000000000000000000000000 Clinanthus_humilis ????????????1G0TG1G111T01GTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTT-T---G0TTGG00T0GT0T0GT0TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT100---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00TGT00TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT10TTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTGG00TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1T-GT-1TTT-0TTTT-1TTTT0TTTT---------1TTT--------1T0T0T0T0T--------0G------------------------TT0----GTT0T0T0T0--------------------------------------------T000GT0T000G0T00GTT--1T0T0T0T0T0-----G001TT0T0T0-----------------------1TT0T0T0T000T-0T000-----------T0T0T0----------------------------T0000TTTT-T1T1T0T0T--001---------------------T001T0T1T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTT0G0TT10000-------T00G000TGG1T100TT0T000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTTTT--G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGTG0G00TT1TT00TT10TG0G-TTGT0GGG0GGG-01TT0TGT10110100010???????????1001101111111110010110000111111101111111001000001100001110111110000000000000000000000000000000000000000000000000000000000000000000 Clinanthus_incarnatus ??????????1111TTG1G111T0-GTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTT-TT--G0TTGG00T0GT0T0GT0TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT100---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00TGT00TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT10TTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TG000T1TGTGG00TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG11G0------------T1T1GTTGG-1TG1T-GTT1TTTT0TTTT-1TTT---------------------------1T0T0T0T0T--------0G------------------------TT0----GTT0T0T0T0--------------------------------------------T000GT0T000G0T00GTT--1T0T0T0T0TG-----G001TT0T0T0-----------------------1TT0T0T0T000T-0T000-----------T0T0T0----------------------------T0000TTTT-T1T1T0T0T--001---------------------T0T0T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111-----TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTT0G0TT10000-------T00G000TGG1T100TT0G000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTTTT--G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGTG0G00TT1TT00TT10TG0GGTTGT0GGG???????????????????????????????????1001101110111010010110000111111101110011001010001100111111100000000000000000000000000000000000000000000000000000000000000000000000 Clinanthus_mirabilis ?????????????????????????GTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTT-TT--G0TTGG00T0GT0T-----GGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT100---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00TGT00TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT10TTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TG000T1TGTGG00TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1T-GTT1TTT-0TTTT-1TTT1-T0T0T0T------------------1T0T0T0T0T--------0G------------------------TT0----GTT0T0T0T0--------------------------------------------T000GT0T000G0T00GTT--1T0T0T0T0-------------------------------------------------------------------------------------------------------------------------------01---------------------T0T0T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTT0G0TT10000-------T000000TGG1T100TT0T000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TG-0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00T00T00T0TT0GTTG00T0TTTTTTTT----G000G0GGTTT-GT1T10GG1TT10TT101G10TGTT1110T0TGG0--GT0G011TTGTTGTTGTG1GT0TT?????????????????????????????????????????????????????????1001101111111110010100000000111001010011001111111111000000000000000000000000000000000000000000000000000000000000000000000000000000 Eucharis_castelnaeana ??????????????????????T0GGTTTTTTT1TT100GTGTGG00011G10GG0110G00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTT-TTTTG0TTGG00T0GT0-----TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00T-------------T000G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00-----TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GT000GTGTGTTT1GTTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTG000TT1T001T11G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1TGGT-1TTT-0TTTT-1TTT-0TTTTG0TTTT---1TTT0T0------TTTG0TTTT1TTT0T01TTT0TTT0T01TTT0T0T0T001T00TT0----GTT0T0T0T0--------------------------------------------T000GT0T000G0T00GTT--1T0T0T0T0T0-----G001TT0T0T0T------------------------------T00-T-0T0T----------------------------------------0T0000T0010TT0T0T1T1T1T0T0T001T0G0T0G0T0GTT0GT0T001T001T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTTGG0TT10000000000-T00G000TGG1T100TT0T000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTT----G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGTG0G00TT1TT00TT10TG0G-TTGT0GGG0GGG-01TT0TGT1011??????????????????1010011011110110010110000000001101111111101100000000000100001001000000000000000000000000000000000000000000000000001000010111100000 Eucharis_formosa ??????????????????????????????????TT100GTGTGG00011G10GG0110G00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTT-TTTTG0TTGG00T0GT0-----TGG1110T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT000TT00TT000T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00-----TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GT000GTGTGTTT1GTTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGGG000TT1T001T1-G001T100TTT0TG0TT110TT0TTG1-G0------------T1T1GTTGG-1TG1TGGT-1TTT-0TTTT-1TTT-0TTTTT0TTTT---11TTT0T----0----------------------------1TTT0T0T0T001T00TT0----GTT0T0T0T0--------------------------------------------T000GT0T000G0T00GTT--1T0T0T0T0T0-----G0G1TT0T0T0T000---------------------------T0--T-0T0T-----------------------------------------T000-T0000TTTT-T1T1T0T0T--001T0G0T0G0T0GTT0GT0T001T001T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTTGG0TT10000000000-T00G000TGG1T100TT0T000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001TGTG0TT1GTTG0T00------T0TT0GTTG00T0T1TTTTTT----G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGTG0G00TT1TT00TT10TG0G-TTGT0GGG0GG1-01TT0TGT1?????????????????????1010111101110110010110000011000101111111101100000000000100001001000001000000000000000000000000000000000000000000000000010000011111 Eucrosia_dodsonii ??????????????????????????TGTTGTTGT0G00GTGTGG00011G10GG0110G00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTT-TTTTG0TTGG00T0GT0-----TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT100---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00-----TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT10TTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTG000TT1T001T1-G001T100TTT0TG0TT1-0TT0TTGG-00------------T1T1GTTGG-1TG1T-G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T0G0T0GTT0GTT--T0-011T0T0T0G000GTT0G1G11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T00TTT1010T1T0GGGTTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTTGG0TT10000000000-T00G000TGG1T100TT0T000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTGGG11TTTTTTGT----G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGT-0G00???????????????????????????????????????????????????????????1011111111111000000000000000001101110011000100000000000000000000000000000000000000000000000000000000000000000000000011111000000000 Eustephia_darwinii ????00TTTG0G1G0TG1G111T0GGTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTTGTTT-G0TTGG00T0GT0-----TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT100---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00-----TG0GT100TTTT100GTT1001100TT10TT1TTTTTTT10000G0T100GT0G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT10TTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTGG00TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1T-GTT11TT-0TTTT-1TTTT---------0TTTT1TTT0T001T0----------------------------------------------T0----GTT0GTT0T0T0T0----------------------------------------T000GT0T000G0T00GTT--1T0T0T0T0T0-----G001TT0T--------------------------1-T0----T000T------------------0T0T0----------------------------G0000TTTT-T0T1T0T0T--001---------------------T0T0T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTT0G0TT10000-------T00G00GTGG1T100TT0T100TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTTTT----00G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGTG0G00TT1TT00TT10TG0G-TTGT0GGG0GGG-01TT0TGT10110100010G0G0???????1111111111111111111111111111111111111100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 Hymenocallis_chiapasiana ???????????????????111T0TGTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000T000GTG000T0TGT1G00TTTTTT-TT--G0TTGG00T0GT0-----TGGT010T0GT011G00T1G0000G000TGT11G0T0G100GTTG0TTGGTT00TT100---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00TGT00TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTGGTT0GT00GTG00GTGTGTTT10TTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTGG00TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1TGGTTGGG1TG1T-GTT1TTT-0TTTT--------------------1TTT0T0----T0TTT0T0T0T0T0T0T0T0G-------------------------T0----GTT0T0T0T0T00000----------------------------------T0T0T000GT0T000G0T00GTTTT1T0T0T0T0T0-----G001TT0T0T11TT0TT0T0T1TTTTT0TT0T0T1TT0T0T0T000T-0T0T0-----------0T0T0T0T0T0-----------------------T0000TTTT-T1T1T0T0T--001---------------------T0T0TGG0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTT0G0TT10000-------T00G000TGG1T100TT0T000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T0{0G}1G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTT----GG00G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T-------------------TGTG0T00TT1TT00TT10TG0G---G????????????????????????????????????????0011100111101100010010000011111101100011000110000000000110000000000001000000111111000000000000000000000000000000000000000000000000 Hymenocallis_glauca ????????????????G1G111T0GGTTTTTTT1TT100GTGTGG00011G10GG0110G00GT0GT0GG0TTGGTTTT10T00T000T000GTG000T0TGT1G00TTTTTT-TT--G0TTGG00T0GT0-----TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT100---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00TGT00TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT10TTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTGG00TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1T-GGT1TTT-0TTTT11TTTT0TTTT---------1TTT0T0----0-TTT0T0T0---------0G------------------------GT00---GTT0T0T0T01T0TT0TT000GT0T0T000GT0TGG000G00T000GG00T0T0T0GG0T0T000G-------------------------G0011--------------------------------------------------------------------------------------------------TTTT-T1T1T0T0T--001---------------------T0T0T0G0T0GTT0GTG11T0TTTTTGTTTT0001111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTTTTT0GT0TTT1G0TTTTT0G0TT10000-------T00G000TGGGT100TT0T000TTTG00000110GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTTGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTTTTT-G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGTG0G00TT1TT00TT10TG0G-TTGT0GGG0GGG-011T0TGT10110100010G0G01T000G10011101111111100000000000011111101111111000010000100000000000100000001111111000000000000000000000000000000000000000000000000000000 Hymenocallis_latifolia ???????????????TG1G111T0GGTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000T000GTG000T0TGT1G00TTTTTT-TT--G0TTGG00T0GT0-----TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT100---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00TGT00TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGGGTTT10TTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTGG00TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1T-G{GT}T1TTT-0TTTT-1TTTT0TTTT---------1TTT0T0----T0TTT0T0T----------0G------------------------TT0GTT0GTT0T0T0T0T0000-----------------------------------T0T0T000GT0T000G0T00GTT0T0TT0T0T0T0T0T0TGG001TT0T0T------------------------1TT0T0T0TT0T0-T00T0-----------T0T0TTT0T0T0TTT00TT0TTT00TTTTTT00TTT00-TTTT-T1T1T0T0T--001---------------------T0T0T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTT0G0TT10000-------T00G000TGG1T100TT0T000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTT----G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGTG0G00TT1TT00TT10TG0G-TTGT0GGG0GGG-011T0TGT1?????????????????????0011101111111110000000000011111101111111000110000100000110000100000001000000000000000001000111000000000000000000000000000000000000 Hymenocallis_tubiflora ????????????????G1G1G1T0GGTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000T000GTG000T0TGT1G00TTTTTT-TT--G0TTGG00T0GT0-----TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT100---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00TGT00TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT10TTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTGG00TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1T-GTT1TTT-0TTTT-1TTTT0TTTT---------1TTT0T0----T0TTT0T0T--0-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T0T0000TTTT-T1T1T0T0T--001---------------------T0T0T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTG0G0TT10000-------T00G000TGG1T100TT0T000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTTT---G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGTG0G00TT1TG00TT10TG0G-TTGT0GGG0GGG-011T0TGT1011G?????????????????0011101111111110000000000011111101111111000010000000000000000100000001000000000000000000000000111000000000000000000000000000000000 Ismene_vargasii ????00TTTG0G1G0TG1G111T0GGTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000T000GTG000T0TGT1G00TTTTTT-T---G0TTGG00T0GT0-----TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT100---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00TGT00TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT10TTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0T0000T0TGTGG00TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1T-GTT1TTT-0TTTT-1TTT-------------------0T0----T0TTT0T0----------T0G------------------------TT0----GTT0T0T0T0T000GT0T000G-------0G-------------------T0T0T000GT0T000G0T00GTT--1T0T0T0T0T0T0---G001TT0T0T------------------------1TT0T0T0T000T-0T0T0-----------------------------------------T000G0000TTTT-T1T1T0T0T--001---------------------T0T0T0G0G0GTT0GTG11T0TTTTTGGTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT1-0GGGGG00TTTTT1TT0GT0TTT1G0TTTTT0G0TT11000-------T00G000TGG1T1GTTT00000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T1110T00TG0TGT0TTTGGTG00T1100TG10TGGT1T00T001G001T-T00TT1GTTG0T0T------TTTT0GTTG00T0TTTTTTTTTTTT---0G0TTTTTT1T0000GGTTT10TT101G11T00T1-10T0T11GTGTT00111TTGTTGTTGT????????????????????????????????????????????????????????????????0011101111111110010100000011111100100011000000000100000100010000000001000000000000111111111000000000000000000000000000000000000000 Pucara_leucantha ?????0TTTG0G1G0TG1G111T0GGTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTT-TTTTG0TTGG00T0GT0-----TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT000---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00-----TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT1GTTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTG000TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1T-G1-1TTT-0TTTT-1TTT-0TTTTT0TTTT---1TTT0T0---------------------------------1TTT0T0T0T0T0T00TT0----GTT0T0T0T0--------------------------------------------T00T0T0T00-T-T0-GTT0T0T0T0T000G---------T0T0--0GT0T0T------------------------------0-T0000-----------T0T0T---------------000T0T0T0T0000T0000TTTT-T1T1T0T0T--001T0G0T0G0T0GTT0GT0T001T001T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTTGG0TT0000000000--T00G000TGG1T100TT0T000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTT----G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTG-G0G00TT1TT00TT10TG0G-TTGT0GGG0GG-G01TT0TG-10110100010G0G0???????1011111111111110010000000011001101111011101100000000000110001001100000000000000000000000000000000000101111111111000000000000000000 Stenomesson_aurantiacum 100T00TTTG0G1G0TG1G111T0GGTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTT-TTT-G0TTGG00T0GT0-----TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT000---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00-----TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT1GTTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTG000TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1T-GTT1TTT-0TTTT-1TTT-0TTTTT0TTTT---1TTT0T0---------------------------------1TTT0T0T0T0T0T00TT0----GTT0T0T0T0--------------------------------------------T000GT0T000G0T00GTT--1T0T0T0T0T0-----G001TT0T0T0-------------------------------T000T00T000-----------T0T0T-----------------------0T0000T0000TTTT-T1T1T0T0T--001T0G0T0G0T0GTT0GT0T001T001T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT100GG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTTGG0TT100000000000-00G000TGG1T100TT0T100TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTT----G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGTG0G00TT1TT00TT10TG0G-TTGT0GGG0GG--01TT0TGT101101????????????????1111111111111110010110000011001101111011101100000000000010000001111110000000000000000000000000000000000000000000000000000000000000 Stenomesson_chloranthum ????00TTTG0G1G0TG1G111T0GGTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTT-TTT-G0TTGG00T0GT0-----TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT000---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00-----TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT1GTTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTG000TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1T-GTT1TTT-0TTTT-1TTT-0TTTTT0TTTT---1TTT0T0---------------------------------1TTT0T0T0T0T0T00TT0----GTT0T0T0T0--------------------------------------------T000GT0T00GT0T00GTT--1T0T0T0T0T0-----G001TT0T0-------------------------1TT0T0T0T000T-0T0T0T0000T0000T--------------------000T0T0T0T0000T0000TTTT-T1T1T0T0T--001T0G0T0G0T0GTT0GT0T001T001T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTTGG0TT0000000000--T00G000TGG1T100TT0T000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTT----G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGTG0G00TT1TT00TT10TG0G-TTGT0GGG0GG-G01TT0TG-101101????????????????1111111111111110010110000011001101111011101100000000000100000001100000000000000000000000000000000000000000000111010100000000000000 Stenomesson_latifolium ???????????????????11-T01GTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTT-TTT-G0TTGG00T0GT0-----TGGT010T0GT011G00T1-0000T000TGT11G0T0G100GTTG0TTGGTT00TT000---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00-----TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT1GTTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTG000TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0TTG1G0TTG1G0T1T1GTTGG-1TG1T-GT-1TTT-0TTTT-1TTT-0TTTTT0TTT1---1TTT0T0---------------------------------1TTT0T0T0T0T0T00TT0----GTT0T0T0T0--------------------------------------------T000GT0T000G0T00GTT--1T0T0T0T0T0-----G001TT0T0-------------------------1TT0T0T0T000T-0T0T----------------------------------------0T0000T0000TTTT-T1T1T0T0T--001T0G0T0G0T0GTT0GT0T001T001T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TGT1T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1T0TTTTTGG0TT1000000000--T00G000TGG1T100TT0T000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTT----G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGTG0G00TT1TT00TT10TG0G-TTGT0GT1011G101TT0TG-1011??????????????????1111111111011110010110000011001101111011101100000000000100001001100000000000000000000000000000000100000000000101111000000000000000 Stenomesson_miniatum ??????????????????G11-1TGGTTTTTTT1TT10-GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTT-TTT-G0TTGG00T0GT0-----TGGG010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT000---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00-----TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT1GTTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTG000TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1T-GTT1TTT-0TTTT-1TTT-0TTTTT0TTTT---1TTT0T0---------------------------------1TTT0T0T0T0T0T00TT0----GTT0T0T0T0--------------------------------------------T000GT0T000G0T00GTT--1T0T0T0T0T0-----G001TT0T0-------------------------------------T-0T000-----------T0T0T-----------------------0T0000T0000TTTT-T1T1T0T0T--001T0G0T0G0T0GTT0GT0T001T001T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTTGG0TT100000000000T00G000TGG1T100TT0T100TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTT----G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTG-G0G00TT1TT00TT10-G0G-TTGT0GGG0GGG-01TT0TGT101101????????????????1111111111111110010110000011001101111111101100000000000110000001101000000000000000000000000000000111110000000000000000000000000000 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M2403] TITLE 'atpB-rbcL spacer'; LINK TAXA = Taxa1; DIMENSIONS NCHAR=1276; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Chlidanthus_fragrans ????AATTTGAGCGATGCGCCCTAGGTTTTTTTCTTCAAGTGTGGAAACCGCAGGACCGGAAGTAGTAGGATTGGTTTTCATAATAAA----GTGAAATATGTCGAATTTTTT-TTT-GATTGGAATAGTA-----TGGTACATAGTACCGAATCGAAAATAAATGTCCGATAGCAAGTTGATTGGTTAATTCAA---------TAA-GAAATAAATGGGAATTAGCACTCGATTTAGTTGGTACCACCCAACCGAATCAAATTCAATCGTTTACTCATTTAA-----TGAGTCAATTTTCAAGTTCAACCAATTCATTCTTTTTT-CAAAAGATCAAGTAGATGAATAAGAATTG-TGAGTAAGTGAAGTGTGTTTCATTTCTCTATCATTATAGAAAATACCATCTAGACTAGATTAAATCTGTGGAATTCTAACTC-GAACTCAATTTATGATTC-ATTATTGC-GA------------TCTCGTTGG-CTGCT-GTTCTTT-ATTTT-CTTT-ATTTCTTTTATTTTCTTTTTAACTAACTATAATATATA---------------------------------TA----GTTAGTTATA--------------------------------------------TAAAGTATAAAGATAAGTT--CTATATATATA-----GAACTTAT--------------------------C-TA----TAAAT------------------ATATA----------------------------GAAAATTTT-TCTCTATAT--AACTATATAGATAGTTAGTATAACTATATAGATAGTTAGTGCCTATTTTTGTTTTATACCCCTTCCCTTTCATGGATGAATTATGCCTATTTTCACATCTAGGATTTACATATACAACATATATCACTGTCAAGGGGGAATTTTTCTTAGTATTTCGATTTTTAGATTCAAAA-------TAAGAAATGGCTCAATTATAAATTTGAAAAACGAGGATTGGGTTGCGCCATATATATCAAAGAGTATACAATAATGATGTATTTGGTGAATCAAATGCATGGTCTAATAACGAACT-TAATTCGTTGATAA------TATTAGTTGAATATTTTTTTT----GAAAGATTTTT-GTCAAAGGTTTCATTCACGCCTAATC-CATATCGA--GTAGACCTTGTTGTTGTGAGAATTCTTAATTCATGAG-TTGTAGGGAGGG-ACTTATGTCACCACAAACAGAGACTAAAGC Clinanthus_humilis ????????????CGATGCGCCCTACGTTTTTTTCTTCAAGTGTGGAAACCGCAGGACCGGAAGTAGTAGGATTGGTTTTCATAATAAA----GTGAAATATGTCGAATTTTTT-T---GATTGGAATAGTATAGTATGGTACATAGTACCGAATCGAAAATAAATGTCCGATAGCAAGTTGATTGGTTAATTCAA---------TAA-GAAATAAATGGGAATTAGCACTCGATTTAGTTGGTACCACCCAACCGAATCAAATTCAATCGTTTACTCATTTAATGTAATGAGTCAATTTTCAAGTTCAACCAATTCATTCTTTTTT-CAAAAGATCAAGTCGATGAATAAGAATTG-TGAGTAAGTGAAGTGTGTTTCATTTCTCTATCATTATAGAAAATACCATCTAGACTAGATTAAATCTGTGGAATTCTAACTC-GAACTCAATTTATGATTC-ATTATTGC-GA------------TCTCGTTGG-CTGCT-GT-CTTT-ATTTT-CTTTTATTTT---------CTTT--------CTATATATAT--------AG------------------------TTA----GTTATATATA--------------------------------------------TAAAGTATAAAGATAAGTT--CTATATATATA-----GAACTTATATA-----------------------CTTATATATAAAT-ATAAA-----------TATATA----------------------------TAAAATTTT-TCTCTATAT--AAC---------------------TAACTATCTAGTTAGTGCCTATTTTTGTTTTATACCCCTTCCCTTTCATGGATGAATTATGCCTATTTTCACATCTAGGATTTACATATACAACATATATCACTGTCAAGGGGGAATTTTTCTTAGTATTTCGATTTTTAGATTCAAAA-------TAAGAAATGGCTCAATTATAAATTTGAAAAACGAGGATTGGGTTGCGCCATATATATCAAAGAGTATACAATAATGATGTATTTGGTGAATCAAATGCATGGTCTAATAACGAACT-TAATTCGTTGATAA------TATTAGTTGAATATTTTTTTTTT--GAAAGATTTTT-GTCAAAGGTTTCATTCACGCCTAATC-CATATCGA--GTAGACCTTGTTGTTGTGAGAATTCTTAATTCATGAG-TTGTAGGGAGGG-ACTTATGTCACCACAAACA??????????? Clinanthus_incarnatus ??????????CCCCTTGCGCCCTA-GTTTTTTTCTTCAAGTGTGGAAACCGCAGGACCGGAAGTAGTAGGATTGGTTTTCATAATAAA----GTGAAATATGTCGAATTTTTT-TT--GATTGGAATAGTATAGTATGGTACATAGTACCGAATCGAAAATAAATGTCCGATAGCAAGTTGATTGGTTAATTCAA---------TAA-GAAATAAATGGGAATTAGCACTCGATTTAGTTGGTACCACCCAACCGAATCAAATTCAATCGTTTACTCATTTAATGTAATGAGTCAATTTTCAAGTTCAACCAATTCATTCTTTTTT-CAAAAGATCAAGTCGATGAATAAGAATTG-TGAGTAAGTGAAGTGTGTTTCATTTCTCTATCATTATAGAAAATACCATCTAGACTAGATGAAATCTGTGGAATTCTAACTC-GAACTCAATTTATGATTC-ATTATTGCCGA------------TCTCGTTGG-CTGCT-GTTCTTTTATTTT-CTTT---------------------------CTATATATAT--------AG------------------------TTA----GTTATATATA--------------------------------------------TAAAGTATAAAGATAAGTT--CTATATATATG-----GAACTTATATA-----------------------CTTATATATAAAT-ATAAA-----------TATATA----------------------------TAAAATTTT-TCTCTATAT--AAC---------------------TATATAGATAGTTAGTGCCTATTTTTGTTTTATACCCC-----TTTCATGGATGAATTATGCCTATTTTCACATCTAGGATTTACATATACAACATATATCACTGTCAAGGGGGAATTTTTCTTAGTATTTCGATTTTTAGATTCAAAA-------TAAGAAATGGCTCAATTAGAAATTTGAAAAACGAGGATTGGGTTGCGCCATATATATCAAAGAGTATACAATAATGATGTATTTGGTGAATCAAATGCATGGTCTAATAACGAACT-TAATTCGTTGATAA------TATTAGTTGAATATTTTTTTTTT--GAAAGATTTTT-GTCAAAGGTTTCATTCACGCCTAATC-CATATCGA--GTAGACCTTGTTGTTGTGAGAATTCTTAATTCATGAGGTTGTAGGG??????????????????????????????????? Clinanthus_mirabilis ?????????????????????????GTTTTTTTCTTCAAGTGTGGAAACCGCAGGACCGGAAGTAGTAGGATTGGTTTTCATAATAAA----GTGAAATATGTCGAATTTTTT-TT--GATTGGAATAGTAT-----GGTACATAGTACCGAATCGAAAATAAATGTCCGATAGCAAGTTGATTGGTTAATTCAA---------TAA-GAAATAAATGGGAATTAGCACTCGATTTAGTTGGTACCACCCAACCGAATCAAATTCAATCGTTTACTCATTTAATGTAATGAGTCAATTTTCAAGTTCAACCAATTCATTCTTTTTT-CAAAAGATCAAGTCGATGAATAAGAATTG-TGAGTAAGTGAAGTGTGTTTCATTTCTCTATCATTATAGAAAATACCATCTAGACTAGATGAAATCTGTGGAATTCTAACTC-GAACTCAATTTATGATTC-ATTATTGC-GA------------TCTCGTTGG-CTGCT-GTTCTTT-ATTTT-CTTTC-TATATAT------------------CTATATATAT--------AG------------------------TTA----GTTATATATA--------------------------------------------TAAAGTATAAAGATAAGTT--CTATATATA-------------------------------------------------------------------------------------------------------------------------------AC---------------------TATATAGATAGTTAGTGCCTATTTTTGTTTTATACCCCTTCCCTTTCATGGATGAATTATGCCTATTTTCACATCTAGGATTTACATATACAACATATATCACTGTCAAGGGGGAATTTTTCTTAGTATTTCGATTTTTAGATTCAAAA-------TAAAAAATGGCTCAATTATAAATTTGAAAAACGAGGATTGGGTTGCGCCATATATATCAAAGAGTATACAATAATGATG-ATTTGGTGAATCAAATGCATGGTCTAATAACGAACT-TAATTCGTTGATAATAATAATATTAGTTGAATATTTTTTTT----GAAAGAGGTTT-GTCTCAGGCTTCATTCACGCATGTTCCCATATGGA--GTAGACCTTGTTGTTGTGCGTATT????????????????????????????????????????????????????????? Eucharis_castelnaeana ??????????????????????TAGGTTTTTTTCTTCAAGTGTGGAAACCGCAGGACCAGAAGTAGTAGGATTGGTTTTCATAATAAA----GTGAAATATGTCGAATTTTTT-TTTTGATTGGAATAGTA-----TGGTACATAGTACCGAATCGAAAATAAATGTCCGATAGCAAGTTGATTGGTTAAT-------------TAAAGAAATAAATGGGAATTAGCACTCGATTTAGTTGGTACCACCCAACCGAATCAAATTCAATCGTTTACTCATTTAA-----TGAGTCAATTTTCAAGTTCAACCAATTCATTCTTTTTT-CAAAAGATCAAGTCGATGAATAAGAATTG-TGAGTAAGTAAAGTGTGTTTCGTTTCTCTATCATTATAGAAAATACCATCTAGACTAGATTAAATCTGTGAAATTCTAACTCCGAACTCAATTTATGATTC-ATTATTGC-GA------------TCTCGTTGG-CTGCTGGT-CTTT-ATTTT-CTTT-ATTTTGATTTT---CTTTATA------TTTGATTTTCTTTATACTTTATTTATACTTTATATATAACTAATTA----GTTATATATA--------------------------------------------TAAAGTATAAAGATAAGTT--CTATATATATA-----GAACTTATATAT------------------------------TAA-T-ATAT----------------------------------------ATAAAATAACATTATATCTCTCTATATAACTAGATAGATAGTTAGTATAACTAACTAGATAGTTAGTGCCTATTTTTGTTTTATACCCCTTCCCTTTCATGGATGAATTATGCCTATTTTCACATCTAGGATTTACATATACAACATATATCACTGTCAAGGGGGAATTTTTCTTAGTATTTCGATTTTTGGATTCAAAAAAAAAA-TAAGAAATGGCTCAATTATAAATTTGAAAAACGAGGATTGGGTTGCGCCATATATATCAAAGAGTATACAATAATGATGTATTTGGTGAATCAAATGCATGGTCTAATAACGAACT-TAATTCGTTGATAA------TATTAGTTGAATATTTTTTTT----GAAAGATTTTT-GTCAAAGGTTTCATTCACGCCTAATC-CATATCGA--GTAGACCTTGTTGTTGTGAGAATTCTTAATTCATGAG-TTGTAGGGAGGG-ACTTATGTCACC?????????????????? Eucharis_formosa ??????????????????????????????????TTCAAGTGTGGAAACCGCAGGACCAGAAGTAGTAGGATTGGTTTTCATAATAAA----GTGAAATATGTCGAATTTTTT-TTTTGATTGGAATAGTA-----TGGCCCATAGTACCGAATCGAAAATAAATGTCCGATAGCAAGTTGATTGGTTAATTAAATTAATTAAATAA-GAAATAAATGGGAATTAGCACTCGATTTAGTTGGTACCACCCAACCGAATCAAATTCAATCGTTTACTCATTTAA-----TGAGTCAATTTTCAAGTTCAACCAATTCATTCTTTTTT-CAAAAGATCAAGTCGATGAATAAGAATTG-TGAGTAAGTAAAGTGTGTTTCGTTTCTCTATCATTATAGAAAATACCATCTAGACTAGATTAAATCTGGGAAATTCTAACTC-GAACTCAATTTATGATTCCATTATTGC-GA------------TCTCGTTGG-CTGCTGGT-CTTT-ATTTT-CTTT-ATTTTTATTTT---CCTTTAT----A----------------------------CTTTATATATAACTAATTA----GTTATATATA--------------------------------------------TAAAGTATAAAGATAAGTT--CTATATATATA-----GAGCTTATATATAAA---------------------------TA--T-ATAT-----------------------------------------TAAA-TAAAATTTT-TCTCTATAT--AACTAGATAGATAGTTAGTATAACTAACTAGATAGTTAGTGCCTATTTTTGTTTTATACCCCTTCCCTTTCATGGATGAATTATGCCTATTTTCACATCTAGGATTTACATATACAACATATATCACTGTCAAGGGGGAATTTTTCTTAGTATTTCGATTTTTGGATTCAAAAAAAAAA-TAAGAAATGGCTCAATTATAAATTTGAAAAACGAGGATTGGGTTGCGCCATATATATCAAAGAGTATACAATAATGATGTATTTGGTGAATCAAATGCATGGTCTAATAACGAACTGTGATTCGTTGATAA------TATTAGTTGAATATCTTTTTT----GAAAGATTTTT-GTCAAAGGTTTCATTCACGCCTAATC-CATATCGA--GTAGACCTTGTTGTTGTGAGAATTCTTAATTCATGAG-TTGTAGGGAGGC-ACTTATGTC????????????????????? Eucrosia_dodsonii ??????????????????????????TGTTGTTGTAGAAGTGTGGAAACCGCAGGACCAGAAGTAGTAGGATTGGTTTTCATAATAAA----GTGAAATATGTCGAATTTTTT-TTTTGATTGGAATAGTA-----TGGTACATAGTACCGAATCGAAAATAAATGTCCGATAGCAAGTTGATTGGTTAATTCAA---------TAA-GAAATAAATGGGAATTAGCACTCGATTTAGTTGGTACCACCCAACCGAATCAAATTCAATCGTTTACTCATTTAA-----TGAGTCAATTTTCAAGTTCAACCAATTCATTCTTTTTT-CAAAAGATCAAGTCGATGAATAAGAATTG-TGAGTAAGTGAAGTGTGTTTCATTTCTCTATCATTATAGAAAATACCATCTAGACTAGATTAAATCTGTGAAATTCTAACTC-GAACTCAATTTATGATTC-ATTATTGG-AA------------TCTCGTTGG-CTGCT-G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGATAGTTAGTT--TA-ACCTATATAGAAAGTTAGCGCCTATTTTTGTTTTATACCCCTTCCCTTTCATGGATGAATTATGCCTAATTTCACATCTAGGGTTTACATATACAACATATATCACTGTCAAGGGGGAATTTTTCTTAGTATTTCGATTTTTGGATTCAAAAAAAAAA-TAAGAAATGGCTCAATTATAAATTTGAAAAACGAGGATTGGGTTGCGCCATATATATCAAAGAGTATACAATAATGATGTATTTGGTGAATCAAATGCATGGTCTAATAACGAACT-TAATTCGTTGATAA------TATTAGTTGGGCCTTTTTTGT----GAAAGATTTTT-GTCAAAGGTTTCATTCACGCCTAATC-CATATCGA--GTAGACCTTGTTGTTGT-AGAA??????????????????????????????????????????????????????????? Eustephia_darwinii ????AATTTGAGCGATGCGCCCTAGGTTTTTTTCTTCAAGTGTGGAAACCGCAGGACCGGAAGTAGTAGGATTGGTTTTCATAATAAA----GTGAAATATGTCGAATTTTTTGTTT-GATTGGAATAGTA-----TGGTACATAGTACCGAATCGAAAATAAATGTCCGATAGCAAGTTGATTGGTTAATTCAA---------TAA-GAAATAAATGGGAATTAGCACTCGATTTAGTTGGTACCACCCAACCGAATCAAATTCAATCGTTTACTCATTTAA-----TGAGTCAATTTTCAAGTTCAACCAATTCATTCTTTTTTTCAAAAGATCAAGTAGATGAATAAGAATTG-TGAGTAAGTGAAGTGTGTTTCATTTCTCTATCATTATAGAAAATACCATCTAGACTAGATTAAATCTGTGGAATTCTAACTC-GAACTCAATTTATGATTC-ATTATTGC-GA------------TCTCGTTGG-CTGCT-GTTCCTT-ATTTT-CTTTT---------ATTTTCTTTATAACTA----------------------------------------------TA----GTTAGTTATATATA----------------------------------------TAAAGTATAAAGATAAGTT--CTATATATATA-----GAACTTAT--------------------------C-TA----TAAAT------------------ATATA----------------------------GAAAATTTT-TATCTATAT--AAC---------------------TATATAGATAGTTAGTGCCTATTTTTGTTTTATACCCCTTCCCTTTCATGGATGAATTATGCCTATTTTCACATCTAGGATTTACATATACAACATATATCACTGTCAAGGGGGAATTTTTCTTAGTATTTCGATTTTTAGATTCAAAA-------TAAGAAGTGGCTCAATTATCAATTTGAAAAACGAGGATTGGGTTGCGCCATATATATCAAAGAGTATACAATAATGATGTATTTGGTGAATCAAATGCATGGTCTAATAACGAACT-TAATTCGTTGATAA------TATTAGTTGAATATTTTTTTTTT----AAGATTTTT-GTCAAAGGTTTCATTCACGCCTAATC-CATATCGA--GTAGACCTTGTTGTTGTGAGAATTCTTAATTCATGAG-TTGTAGGGAGGG-ACTTATGTCACCACAAACAGAGA??????? Hymenocallis_chiapasiana ???????????????????CCCTATGTTTTTTTCTTCAAGTGTGGAAACCGCAGGACCGGAAGTAGTAGGATTGGTTTTCATAATAAATAAAGTGAAATATGTCGAATTTTTT-TT--GATTGGAATAGTA-----TGGTACATAGTACCGAATCGAAAAGAAATGTCCGATAGCAAGTTGATTGGTTAATTCAA---------TAA-GAAATAAATGGGAATTAGCACTCGATTTAGTTGGTACCACCCAACCGAATCAAATTCAATCGTTTACTCATTTAATGTAATGAGTCAATTTTCAAGTTCAACCAATTCATTCTTTTTT-CAAAAGATCAAGTCGATGAATAAGAATTGGTTAGTAAGTGAAGTGTGTTTCATTTCTCTATCATTATAGAAAATACCATCTAGACTAGATTAAATCTGTGGAATTCTAACTC-GAACTCAATTTATGATTC-ATTATTGC-GA------------TCTGGTTGGGCTGCT-GTTCTTT-ATTTT--------------------CTTTATA----TATTTATATATATATATATAG-------------------------TA----GTTATATATATAAAAA----------------------------------TATATAAAGTATAAAGATAAGTTTTCTATATATATA-----GAACTTATATCCTTATTATATCTTTTTATTATATCTTATATATAAAT-ATATA-----------ATATATATATA-----------------------TAAAATTTT-TCTCTATAT--AAC---------------------TATATGGATAGTTAGTGCCTATTTTTGTTTTATACCCCTTCCCTTTCATGGATGAATTATGCCTATTTTCACATCTAGGATTTACATATACAACATATATCACTGTCAAGGGGGAATTTTTCTTAGTATTTCGATTTTTAGATTCAAAA-------TAAGAAATGGCTCAATTATAAATTTGAAAAACGAGGATTGGGTTGCGCCATATATATCAAAGAGTATACAATAATGATGTATTTGGTGAATCAAATGCATGGTCTAATA{AG}CGAACT-TAATTCGTTGATAA------TATTAGTTGAATATTTTTTTT----GGAAGATTTTT-GTCAAAGGTTTCATTCACGCCTAATC-CATAT-------------------TGTGATAATTCTTAATTCATGAG---G???????????????????????????????????????? Hymenocallis_glauca ????????????????GCGCCCTAGGTTTTTTTCTTCAAGTGTGGAAACCGCAGGACCAGAAGTAGTAGGATTGGTTTTCATAATAAATAAAGTGAAATATGTCGAATTTTTT-TT--GATTGGAATAGTA-----TGGTACATAGTACCGAATCGAAAATAAATGTCCGATAGCAAGTTGATTGGTTAATTCAA---------TAA-GAAATAAATGGGAATTAGCACTCGATTTAGTTGGTACCACCCAACCGAATCAAATTCAATCGTTTACTCATTTAATGTAATGAGTCAATTTTCAAGTTCAACCAATTCATTCTTTTTT-CAAAAGATCAAGTCGATGAATAAGAATTG-TGAGTAAGTGAAGTGTGTTTCATTTCTCTATCATTATAGAAAATACCATCTAGACTAGATTAAATCTGTGGAATTCTAACTC-GAACTCAATTTATGATTC-ATTATTGC-GA------------TCTCGTTGG-CTGCT-GGTCTTT-ATTTTCCTTTTATTTT---------CTTTATA----A-TTTATATA---------AG------------------------GTAA---GTTATATATACTATTATTAAAGTATATAAAGTATGGAAAGAATAAAGGAATATATAGGATATAAAG-------------------------GAACC--------------------------------------------------------------------------------------------------TTTT-TCTCTATAT--AAC---------------------TATATAGATAGTTAGTGCCTATTTTTGTTTTAAACCCCTTCCCTTTCATGGATGAATTATGCCTATTTTCACATCTAGGATTTACATATACAACATATATCACTGTCAAGGGGGAATTTTTTTTAGTATTTCGATTTTTAGATTCAAAA-------TAAGAAATGGGTCAATTATAAATTTGAAAAACCAGGATTGGGTTGCGCCATATATATCAAAGAGTATACAATAATGATGTATTTTGTGAATCAAATGCATGGTCTAATAACGAACT-TAATTCGTTGATAA------TATTAGTTGAATATTTTTTTTTTT-GAAAGATTTTT-GTCAAAGGTTTCATTCACGCCTAATC-CATATCGA--GTAGACCTTGTTGTTGTGAGAATTCTTAATTCATGAG-TTGTAGGGAGGG-ACCTATGTCACCACAAACAGAGACTAAAGC Hymenocallis_latifolia ???????????????TGCGCCCTAGGTTTTTTTCTTCAAGTGTGGAAACCGCAGGACCGGAAGTAGTAGGATTGGTTTTCATAATAAATAAAGTGAAATATGTCGAATTTTTT-TT--GATTGGAATAGTA-----TGGTACATAGTACCGAATCGAAAATAAATGTCCGATAGCAAGTTGATTGGTTAATTCAA---------TAA-GAAATAAATGGGAATTAGCACTCGATTTAGTTGGTACCACCCAACCGAATCAAATTCAATCGTTTACTCATTTAATGTAATGAGTCAATTTTCAAGTTCAACCAATTCATTCTTTTTT-CAAAAGATCAAGTCGATGAATAAGAATTG-TGAGTAAGTGAAGTGGGTTTCATTTCTCTATCATTATAGAAAATACCATCTAGACTAGATTAAATCTGTGGAATTCTAACTC-GAACTCAATTTATGATTC-ATTATTGC-GA------------TCTCGTTGG-CTGCT-G{GT}TCTTT-ATTTT-CTTTTATTTT---------CTTTATA----TATTTATAT----------AG------------------------TTAGTTAGTTATATATATAAAA-----------------------------------TATATAAAGTATAAAGATAAGTTATATTATATATATATATGGAACTTATAT------------------------CTTATATATTATA-TAATA-----------TATATTTATATATTTAATTATTTAATTTTTTAATTTAA-TTTT-TCTCTATAT--AAC---------------------TATATAGATAGTTAGTGCCTATTTTTGTTTTATACCCCTTCCCTTTCATGGATGAATTATGCCTATTTTCACATCTAGGATTTACATATACAACATATATCACTGTCAAGGGGGAATTTTTCTTAGTATTTCGATTTTTAGATTCAAAA-------TAAGAAATGGCTCAATTATAAATTTGAAAAACGAGGATTGGGTTGCGCCATATATATCAAAGAGTATACAATAATGATGTATTTGGTGAATCAAATGCATGGTCTAATAACGAACT-TAATTCGTTGATAA------TATTAGTTGAATATTTTTTTT----GAAAGATTTTT-GTCAAAGGTTTCATTCACGCCTAATC-CATATCGA--GTAGACCTTGTTGTTGTGAGAATTCTTAATTCATGAG-TTGTAGGGAGGG-ACCTATGTC????????????????????? Hymenocallis_tubiflora ????????????????GCGCGCTAGGTTTTTTTCTTCAAGTGTGGAAACCGCAGGACCGGAAGTAGTAGGATTGGTTTTCATAATAAATAAAGTGAAATATGTCGAATTTTTT-TT--GATTGGAATAGTA-----TGGTACATAGTACCGAATCGAAAATAAATGTCCGATAGCAAGTTGATTGGTTAATTCAA---------TAA-GAAATAAATGGGAATTAGCACTCGATTTAGTTGGTACCACCCAACCGAATCAAATTCAATCGTTTACTCATTTAATGTAATGAGTCAATTTTCAAGTTCAACCAATTCATTCTTTTTT-CAAAAGATCAAGTCGATGAATAAGAATTG-TGAGTAAGTGAAGTGTGTTTCATTTCTCTATCATTATAGAAAATACCATCTAGACTAGATTAAATCTGTGGAATTCTAACTC-GAACTCAATTTATGATTC-ATTATTGC-GA------------TCTCGTTGG-CTGCT-GTTCTTT-ATTTT-CTTTTATTTT---------CTTTATA----TATTTATAT--A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAAAATTTT-TCTCTATAT--AAC---------------------TATATAGATAGTTAGTGCCTATTTTTGTTTTATACCCCTTCCCTTTCATGGATGAATTATGCCTATTTTCACATCTAGGATTTACATATACAACATATATCACTGTCAAGGGGGAATTTTTCTTAGTATTTCGATTTTGAGATTCAAAA-------TAAGAAATGGCTCAATTATAAATTTGAAAAACGAGGATTGGGTTGCGCCATATATATCAAAGAGTATACAATAATGATGTATTTGGTGAATCAAATGCATGGTCTAATAACGAACT-TAATTCGTTGATAA------TATTAGTTGAATATTTTTTTTT---GAAAGATTTTT-GTCAAAGGTTTCATTCACGCCTAATC-CATATCGA--GTAGACCTTGTTGTTGTGAGAATTCTGAATTCATGAG-TTGTAGGGAGGG-ACCTATGTCACCG????????????????? Ismene_vargasii ????AATTTGAGCGATGCGCCCTAGGTTTTTTTCTTCAAGTGTGGAAACCGCAGGACCGGAAGTAGTAGGATTGGTTTTCATAATAAATAAAGTGAAATATGTCGAATTTTTT-T---GATTGGAATAGTA-----TGGTACATAGTACCGAATCGAAAATAAATGTCCGATAGCAAGTTGATTGGTTAATTCAA---------TAA-GAAATAAATGGGAATTAGCACTCGATTTAGTTGGTACCACCCAACCGAATCAAATTCAATCGTTTACTCATTTAATGTAATGAGTCAATTTTCAAGTTCAACCAATTCATTCTTTTTT-CAAAAGATCAAGTCGATGAATAAGAATTG-TGAGTAAGTGAAGTGTGTTTCATTTCTCTATCATTATAGAAAATACCATCTAGACTAGATAAAATATGTGGAATTCTAACTC-GAACTCAATTTATGATTC-ATTATTGC-GA------------TCTCGTTGG-CTGCT-GTTCTTT-ATTTT-CTTT-------------------ATA----TATTTATA----------TAG------------------------TTA----GTTATATATATAAAGTATAAAG-------AG-------------------TATATAAAGTATAAAGATAAGTT--CTATATATATATA---GAACTTATAT------------------------CTTATATATAAAT-ATATA-----------------------------------------TAAAGAAAATTTT-TCTCTATAT--AAC---------------------TATATAGAGAGTTAGTGCCTATTTTTGGTTTATACCCCTTCCCTTTCATGGATGAATTATGCCTATTTTCACATCTAGGATTTACATATACAACATATATCACTGTC-AGGGGGAATTTTTCTTAGTATTTCGATTTTTAGATTCCAAA-------TAAGAAATGGCTCGTTTAAAAATTTGAAAAACGAGGATTGGGTTGCGCCATATATATCAAAGAGTATCCCATAATGATGTATTTGGTGAATCCAATGCATGGTCTAATAACGAACT-TAATTCGTTGATAT------TTTTAGTTGAATATTTTTTTTTTTT---AGATTTTTTCTAAAAGGTTTCATTCACGCCTAATC-CATATCCGTGTTAACCCTTGTTGTTGT???????????????????????????????????????????????????????????????? Pucara_leucantha ?????ATTTGAGCGATGCGCCCTAGGTTTTTTTCTTCAAGTGTGGAAACCGCAGGACCGGAAGTAGTAGGATTGGTTTTCATAATAAA----GTGAAATATGTCGAATTTTTT-TTTTGATTGGAATAGTA-----TGGTACATAGTACCGAATCGAAAATAAATGTCCGATAGCAAGTTGATTGGTTAATTAAA---------TAA-GAAATAAATGGGAATTAGCACTCGATTTAGTTGGTACCACCCAACCGAATCAAATTCAATCGTTTACTCATTTAA-----TGAGTCAATTTTCAAGTTCAACCAATTCATTCTTTTTT-CAAAAGATCAAGTCGATGAATAAGAATTG-TGAGTAAGTGAAGTGTGTTTCGTTTCTCTATCATTATAGAAAATACCATCTAGACTAGATTAAATCTGTGAAATTCTAACTC-GAACTCAATTTATGATTC-ATTATTGC-GA------------TCTCGTTGG-CTGCT-GC-CTTT-ATTTT-CTTT-ATTTTTATTTT---CTTTATA---------------------------------CTTTATATATATATAATTA----GTTATATATA--------------------------------------------TAATATATAA-T-TA-GTTATATATATAAAG---------TATA--AGTATAT------------------------------A-TAAAA-----------TATAT---------------AAATATATATAAAATAAAATTTT-TCTCTATAT--AACTAGATAGATAGTTAGTATAACTAACTAGATAGTTAGTGCCTATTTTTGTTTTATACCCCTTCCCTTTCATGGATGAATTATGCCTATTTTCACATCTAGGATTTACATATACAACATATATCACTGTCAAGGGGGAATTTTTCTTAGTATTTCGATTTTTGGATTAAAAAAAAAA--TAAGAAATGGCTCAATTATAAATTTGAAAAACGAGGATTGGGTTGCGCCATATATATCAAAGAGTATACAATAATGATGTATTTGGTGAATCAAATGCATGGTCTAATAACGAACT-TAATTCGTTGATAA------TATTAGTTGAATATTTTTTTT----GAAAGATTTTT-GTCAAAGGTTTCATTCACGCCTAATC-CATATCGA--GTAGACCTTGTTGTTG-GAGAATTCTTAATTCATGAG-TTGTAGGGAGG-GACTTATG-CACCACAAACAGAGA??????? Stenomesson_aurantiacum CAATAATTTGAGCGATGCGCCCTAGGTTTTTTTCTTCAAGTGTGGAAACCGCAGGACCGGAAGTAGTAGGATTGGTTTTCATAATAAA----GTGAAATATGTCGAATTTTTT-TTT-GATTGGAATAGTA-----TGGTACATAGTACCGAATCGAAAATAAATGTCCGATAGCAAGTTGATTGGTTAATTAAA---------TAA-GAAATAAATGGGAATTAGCACTCGATTTAGTTGGTACCACCCAACCGAATCAAATTCAATCGTTTACTCATTTAA-----TGAGTCAATTTTCAAGTTCAACCAATTCATTCTTTTTT-CAAAAGATCAAGTCGATGAATAAGAATTG-TGAGTAAGTGAAGTGTGTTTCGTTTCTCTATCATTATAGAAAATACCATCTAGACTAGATTAAATCTGTGAAATTCTAACTC-GAACTCAATTTATGATTC-ATTATTGC-GA------------TCTCGTTGG-CTGCT-GTTCTTT-ATTTT-CTTT-ATTTTTATTTT---CTTTATA---------------------------------CTTTATATATATATAATTA----GTTATATATA--------------------------------------------TAAAGTATAAAGATAAGTT--CTATATATATA-----GAACTTATATA-------------------------------TAAATAATAAA-----------TATAT-----------------------ATAAAATAAAATTTT-TCTCTATAT--AACTAGATAGATAGTTAGTATAACTAACTAGATAGTTAGTGCCTATTTTTGTTTTATACCCCTTCCCTTTCAAGGATGAATTATGCCTATTTTCACATCTAGGATTTACATATACAACATATATCACTGTCAAGGGGGAATTTTTCTTAGTATTTCGATTTTTGGATTCAAAAAAAAAAA-AAGAAATGGCTCAATTATCAATTTGAAAAACGAGGATTGGGTTGCGCCATATATATCAAAGAGTATACAATAATGATGTATTTGGTGAATCAAATGCATGGTCTAATAACGAACT-TAATTCGTTGATAA------TATTAGTTGAATATTTTTTTT----GAAAGATTTTT-GTCAAAGGTTTCATTCACGCCTAATC-CATATCGA--GTAGACCTTGTTGTTGTGAGAATTCTTAATTCATGAG-TTGTAGGGAGG--ACTTATGTCACCAC???????????????? Stenomesson_chloranthum ????AATTTGAGCGATGCGCCCTAGGTTTTTTTCTTCAAGTGTGGAAACCGCAGGACCGGAAGTAGTAGGATTGGTTTTCATAATAAA----GTGAAATATGTCGAATTTTTT-TTT-GATTGGAATAGTA-----TGGTACATAGTACCGAATCGAAAATAAATGTCCGATAGCAAGTTGATTGGTTAATTAAA---------TAA-GAAATAAATGGGAATTAGCACTCGATTTAGTTGGTACCACCCAACCGAATCAAATTCAATCGTTTACTCATTTAA-----TGAGTCAATTTTCAAGTTCAACCAATTCATTCTTTTTT-CAAAAGATCAAGTCGATGAATAAGAATTG-TGAGTAAGTGAAGTGTGTTTCGTTTCTCTATCATTATAGAAAATACCATCTAGACTAGATTAAATCTGTGAAATTCTAACTC-GAACTCAATTTATGATTC-ATTATTGC-GA------------TCTCGTTGG-CTGCT-GTTCTTT-ATTTT-CTTT-ATTTTTATTTT---CTTTATA---------------------------------CTTTATATATATATAATTA----GTTATATATA--------------------------------------------TAAAGTATAAGTATAAGTT--CTATATATATA-----GAACTTATA-------------------------CTTATATATAAAT-ATATATAAAATAAAAT--------------------AAATATATATAAAATAAAATTTT-TCTCTATAT--AACTAGATAGATAGTTAGTATAACTAACTAGATAGTTAGTGCCTATTTTTGTTTTATACCCCTTCCCTTTCATGGATGAATTATGCCTATTTTCACATCTAGGATTTACATATACAACATATATCACTGTCAAGGGGGAATTTTTCTTAGTATTTCGATTTTTGGATTAAAAAAAAAA--TAAGAAATGGCTCAATTATAAATTTGAAAAACGAGGATTGGGTTGCGCCATATATATCAAAGAGTATACAATAATGATGTATTTGGTGAATCAAATGCATGGTCTAATAACGAACT-TAATTCGTTGATAA------TATTAGTTGAATATTTTTTTT----GAAAGATTTTT-GTCAAAGGTTTCATTCACGCCTAATC-CATATCGA--GTAGACCTTGTTGTTGTGAGAATTCTTAATTCATGAG-TTGTAGGGAGG-GACTTATG-CACCAC???????????????? Stenomesson_latifolium ???????????????????CC-TACGTTTTTTTCTTCAAGTGTGGAAACCGCAGGACCGGAAGTAGTAGGATTGGTTTTCATAATAAA----GTGAAATATGTCGAATTTTTT-TTT-GATTGGAATAGTA-----TGGTACATAGTACCGAATC-AAAATAAATGTCCGATAGCAAGTTGATTGGTTAATTAAA---------TAA-GAAATAAATGGGAATTAGCACTCGATTTAGTTGGTACCACCCAACCGAATCAAATTCAATCGTTTACTCATTTAA-----TGAGTCAATTTTCAAGTTCAACCAATTCATTCTTTTTT-CAAAAGATCAAGTCGATGAATAAGAATTG-TGAGTAAGTGAAGTGTGTTTCGTTTCTCTATCATTATAGAAAATACCATCTAGACTAGATTAAATCTGTGAAATTCTAACTC-GAACTCAATTTATGATTC-ATTATTGC-GATTGCGATTGCGATCTCGTTGG-CTGCT-GT-CTTT-ATTTT-CTTT-ATTTTTATTTC---CTTTATA---------------------------------CTTTATATATATATAATTA----GTTATATATA--------------------------------------------TAAAGTATAAAGATAAGTT--CTATATATATA-----GAACTTATA-------------------------CTTATATATAAAT-ATAT----------------------------------------ATAAAATAAAATTTT-TCTCTATAT--AACTAGATAGATAGTTAGTATAACTAACTAGATAGTTAGTGCCTATTTTTGTTTTATACCCCTTCCCTTTCATGGATGAATTATGTCTATTTTCACATCTAGGATTTACATATACAACATATATCACTGTCAAGGGGGAATTTTTCTTAGTATTTCTATTTTTGGATTCAAAAAAAAA--TAAGAAATGGCTCAATTATAAATTTGAAAAACGAGGATTGGGTTGCGCCATATATATCAAAGAGTATACAATAATGATGTATTTGGTGAATCAAATGCATGGTCTAATAACGAACT-TAATTCGTTGATAA------TATTAGTTGAATATTTTTTTT----GAAAGATTTTT-GTCAAAGGTTTCATTCACGCCTAATC-CATATCGA--GTAGACCTTGTTGTTGTGAGAATTCTTAATTCATGAG-TTGTAGTCACCGCACTTATG-CACC?????????????????? Stenomesson_miniatum ??????????????????GCC-CTGGTTTTTTTCTTCA-GTGTGGAAACCGCAGGACCGGAAGTAGTAGGATTGGTTTTCATAATAAA----GTGAAATATGTCGAATTTTTT-TTT-GATTGGAATAGTA-----TGGGACATAGTACCGAATCGAAAATAAATGTCCGATAGCAAGTTGATTGGTTAATTAAA---------TAA-GAAATAAATGGGAATTAGCACTCGATTTAGTTGGTACCACCCAACCGAATCAAATTCAATCGTTTACTCATTTAA-----TGAGTCAATTTTCAAGTTCAACCAATTCATTCTTTTTT-CAAAAGATCAAGTCGATGAATAAGAATTG-TGAGTAAGTGAAGTGTGTTTCGTTTCTCTATCATTATAGAAAATACCATCTAGACTAGATTAAATCTGTGAAATTCTAACTC-GAACTCAATTTATGATTC-ATTATTGC-GA------------TCTCGTTGG-CTGCT-GTTCTTT-ATTTT-CTTT-ATTTTTATTTT---CTTTATA---------------------------------CTTTATATATATATAATTA----GTTATATATA--------------------------------------------TAAAGTATAAAGATAAGTT--CTATATATATA-----GAACTTATA-------------------------------------T-ATAAA-----------TATAT-----------------------ATAAAATAAAATTTT-TCTCTATAT--AACTAGATAGATAGTTAGTATAACTAACTAGATAGTTAGTGCCTATTTTTGTTTTATACCCCTTCCCTTTCATGGATGAATTATGCCTATTTTCACATCTAGGATTTACATATACAACATATATCACTGTCAAGGGGGAATTTTTCTTAGTATTTCGATTTTTGGATTCAAAAAAAAAAATAAGAAATGGCTCAATTATCAATTTGAAAAACGAGGATTGGGTTGCGCCATATATATCAAAGAGTATACAATAATGATGTATTTGGTGAATCAAATGCATGGTCTAATAACGAACT-TAATTCGTTGATAA------TATTAGTTGAATATTTTTTTT----GAAAGATTTTT-GTCAAAGGTTTCATTCACGCCTAATC-CATATCGA--GTAGACCTTGTTGTTG-GAGAATTCTTAATTCA-GAG-TTGTAGGGAGGG-ACTTATGTCACCAC???????????????? ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M2402] TITLE ITS; LINK TAXA = Taxa1; DIMENSIONS NCHAR=646; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Chlidanthus_fragrans TCGAGCCCCGAACGGAAGGATCGCGAACTCGTTGAGCACCCTAGGGGG--CATCAGTTGCCGTTCGCCTTGGGTGCATCAGCCACCGTCGACCTGCACGT-CGTGCGGGATGAAGGGTGGGAACAATTTTCGGCGTGTTGCGCGCCAAGGAACAACCCCGTTTGGAGAGCGGAGCGTGCGGCA-AGCTTT---GCGCAGCAGCACGCGGCGCTATCCCGGTAC-GTCTAACCTGCATGA-CTCTCGGCAACGGATATCTTGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGAGGCTATCTGGTCAAGGGCACGCCTGCCTGGGCGTCACGCCTATC-GACGCTCCCTGCCTCTTACCCCTCCCCCCGCCATGTGCGGTTCGACGGTAGGCACGGATGCGGAGATTTGGCCTCCCACGCTTCGTCGCGTGGTGGGTCGAAGTGCGGGCCGTCGGTCGGGTCGGA-CGCGGCGAGTGGTGGATTGACACGC-ACGT-CGTCGCCGAAGCGACATGGATCGAGCGGTGCACTGGAGGAA--CCCATGCCGACGGG-AGCCACG----------CCCTTGGAAC Clinanthus_humilis TCGAGGCCCGAACGGACG-ACCGTGAACTCGTAGAGCACCTGTGGGGGG-CGGCAATCGCCGTTCTCCATGG-TGCCCCAGCCGCCGCCGGCTTGCACGT-CTTGCGGGACGAGCGGAGGGAACAATTTTCGGCGCGTCGTGCGCCAAGGAGCAGTCCCGCTTGGAGAGGGCATCGTGCTGGA-AGCTTA---GTGCTGCAGCGTGCCAGGCGATCATGGTAAAGTCTAACCTGCACGA-CTCTCGGCAACGGATATCTTGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCTCGAGGCTATCTGGCCAAGGGCACGCCTGCCTGGGCGTCTCGCCT-ACCGACGCTCCGTGCCT------CCTGCCCCCGCCTCGTGCGGTTCGACGGTAGGCACGGATGCGGAGATT-GGCCCCCCACGCATCGTTGCGCGGCGGGTTGAAGTGCGGGCCGTCGGCTGGGCCAGA-CGCGGTGAGTGGTGGATTGACATGC-ACGA-CGCCGTCGAAGCGGCTTGGGCCGGGCGGTGCACCGGAGGAA--CCCACGTCGACGGG-CGCCACG-TGAGCGCT-CCCTTGGAAC Clinanthus_incarnatus TCGAGGCCCGAAAGGACG-ACCGTGAACTCGTAGAGCACCTGTGGGGGG-CGGCAATCGCCGTTCTCCATGG-TGCCCCAGCCGCCGCCGGCTTGCACGT-CGTGCGGGACGAGCGGAGGGAACAATTTTCGGCGCGTCGTGCGCCAAGGAGTAGTCCCGCTTGGAGAGGGCATCGTGCTGGA-AGCTTA---GTGCTGCAGCGTGCCAGGCGATCATGGTAAAGTCTAACCTGCACGA-CTCTCGGCAACGGATATCTTGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCTCGAGGCTATCTGGCCAAGGGCACGCCTGCCTGGGCGTCTCGCCT-ACCGACGCTCCGTGCCT------CCTGCCCCCGCCTCGTGCGGTTCGACGGTAGGCACGGATGCGGAGATT-GGCCCCCCACGCATCGTTGCGCGGCGGGCTGAAGTGCGGGCCGTCGGCTGGGCCAGA-CGCGGTGAGTGGTGGATTGACATGC-ACGA-CGCAGTCGAAGCGGCTTGGGCCGGGCGGTGCACCGGAGGAA--CCCACGTCGACGGG-CGCCACG-TGAGCGCT-CCCTTGGAAC Clinanthus_mirabilis TCGAGGCCCGAACGGAC--ATCGAGAACTCATATAGCACC-GTGGGGGG-CG-CAGTCCTCGTTCGTCATGGGAGCCTCACCCGCCGCCGGCTTGCACCT-CTTGCGGGACGAGAGGAGGGAACAATTTCCGGCACTTCTTGCGCCAAGGAACAGTCCCGGTTGGACACCCCATCGTGCTGTA-GGCTTA---TCGCCGCAGGGGTAAAGGCAATCTTCTTATT-TCTAACCTGCACTAACTCTCGGCAACGGATATCTTGGCTCTCGCATCGATGAAGTACGTAGCGAGATGCGATACTTGGTGTGAATTGAAGAATCCCGTGAACCATCGAGTCTTGGAACTCAAGTTGCGCTCAAGGCTATCTGGCCAAGGGCACGCCTGCCTGGGCGTCTTGCGC-ACGGACGTTACGTGCCT------CGTGCCCCCGTCCCATGCGGTTCTGCGGTAGGCACGGAGGCGGAGATT-GCCCCCCCACGGCTCGGTGCGCGGCGCGGGCAAGTATGGGCGTTCAGGTGGACCAGA-CTCGGGGAGTGGTGGATTGACAAGT-GCAA-TGTCTTCGAAGCGGCCTGGGTCAGCCGTGGCGGCGTGAGGA--ACCCACGTAGACGG-GCGCCACGTGAGCGCT-CCCTTGGAAC Eucharis_castelnaeana TCGAG-CCCGAACGGACG-ATCGCGAACTCGTAGAGCACCCGTGGGGG--CAGCAATCGCCGTCCGCCTTGGGTGCCCCTTCCGCCGCCGTCTTGCACGT-CGTGCGGGGCGAGCGGGGGGAACAATTTCCGGCGCGTT-CGCGCCAAGGAGCAGCCCCGTCTGGAGAGCGGAGCGCGCGGCA-AGCTTTTTTGCGGCGCTGCGCGCGAGGCGATCAAGGTAC-GCCTAACCTGCACGA-CTCTCGGCAACGGATATCTTGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCTATCCGGCCAAGGGCACGCCTGCCTGGGCGTCTCGCCTTGCCGACGCTCCATGCCT------CCCGCCCCCGCCCCGTGCGGTTCGGCGGCCGGCACGGATGCGGAGATT-GGCCCCCCACGCGTCGCTGCGCGGCGGGCCGAAGAGCGGGCCGTCGGCCGGGCCGGA-CGCGGCGAGTGGTGGATTGACACGC-ACGA-CGTCGTCGAAGCGGCCTGGGTCGGGCGGTGCACCGGAGGAA--CCCACGCCGACGGG-CGCCACG-CGG-CGA--CCCTTTGAAC Eucharis_formosa TCGAGACCCGAACGGACG-ATCGCGAACTCGTAGAGCACCCGTGGGGGG-CAGCAATCGCCGTCCGCCTTGGGTGCCCCTTCCGCCGCCGTCTTGCACTT-CTTGCGGGGCGAGCGGGGGGAACAATTTCCGGCGCGTTGCGCGCCAAGGAGCAGCCCCGTCTGGAGAGCGGAGCGCGCGGCA-AGCTTTTTTGCGCCGCTGCGCGCGAGGCGATCAAGGTAC-GTCTAACCTGCACGA-CTCTCGGCAACGGATATCTTGGCTCTCGCATCGATGAAGAACGTAGCGAAACGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCTATCTGGCCAAGGGCACGCCTGCCTGGGCGTCTAGCCTTGCCGACGCTCCATGCCT------CCCGCCCCCGCCCCGTGCGGTTCGGCGGCCGGCACGGATGCGGAGATT-GGCCCCCCACGCGTCGCTGCGCGGCGGGCCGAAGAGCGGGCCGTCGGCCGGGCCGGA-CGCTGCGAGTGGTGGATTGACACGC-ACGA-CGCCGTCGAAGCGGCCTGGGTCGGGCGGTGCACCGGAGGAA--CCCACGCCGACGGG-CGCCACG-CGGGCGC--CCCTTGGAAC Eucrosia_dodsonii TCGAGGCC-GAACGGACG-ATCGCGAACTCGTAGAGCACCCGTGGCGGG-CAGCAATCGCCGTCCGCCTTGGGTTCCCCTTCCGCCGCCGTCTTGCACGT-CGTGCGGGGCGAGCGGGGGGAACAATTTCCGGCGCGTTGCGCGCCAAGGAGCAGCCCCGTCTGGAGAGCGGAGGGTGCGGCT-AGCTTTTTTGCAGCGCTGCGCCCGAGGCGATCAAGGTAC-GTCTAACCTCCACGA-CTCTCGGCAACGGATATCTTGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCTATCTGGCCAAGGGCACGCCTGCCTGGGCGTCTCGCCCTTCCTACGCTCCATGCCT------CACGCCCCCGCCCCGTGCGGTTCGGCGGCCGGCACGGATGCGGAGATT-GGCCCCCCACGCGTCGCTGCGCGGCGGGCCGAAGAGCGGGCCGTCGGTCGGGCCGGA-CGCGGCGAGTGGTGGATTGACACGC-ACGA-CGCCGTCGAGGCGGCCTGGGTCGGGCGGTGCACCGGAGGAA--CCCACGCCGACGGGGCACCACG-TGGGCGCC-CCCTTGGAAC Eustephia_darwinii TCGAGGCCCGAACGATCG-ATCTTGAACTTGTAGAGCACCCATAGGAGGGTAGCAGTCGTCGTCTGCCTTGGGTGCCCCAGCCGTCGTCGTCCTGCACGT-CGTGCGGGATGAGGGACGGGAACAATTTTCGGCGTGTTGCACGCCAAGGAGCAGCCCCGTTTGGAGAGCGGAGCGTGCGGCA-AGCTTA---GTGCAGCAGCACGCGACGCCATCCTGGTAA-GTCTAACCTGCATGA-CTCTCGGCAACGGATATCTTGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCTATCTGGTCAAGGGCACGTCTGCCTGGGCGTCAC-ACGACC-GACGCTCCGTGCCTCCTGCCCACCCCTCTCAC-TGTGCGGTTCGGCGGCAGGCACGGATGCGGAGATTTGACCCCCCACGCTTTGTTGCGTGGCGGGTAGAAGTGCGGGCCATCGGTCGGGTCAGA-AGCGGCGAGTGGTGGATTGACACGC-ACGT-CGCCGTCTAAGCGACATGGCTTGGGCGGTGCACTAAAGGAG--CCCATGTCGA-GGG-CGCCACG-TGAGCGCA-CCCTTG-AAC Hymenocallis_chiapasiana TCGAGCCCCGAACGGACG-ATCGCGAACTCGTAGAGCACCTATGGGGGG-CAGCAACTGCCGTTCGCCATGGGTGCCCCAGCCGCCGTCGGCCTGCACGT-CGTGCGGGACGAGCGGAGGGAACCACTTTCGGCGCGTTGCGCGCCAAGGAGCAGCCCCATTTGGATAGCGGAACGTGCGGCA-AGCTTA---GCGCCGCA--GTGCGACGCGATCGTGGTAC-GTCCAACTTGCACGA-CTCTCGGCAACGGATATCTTGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCTATCTGGTCAAGGGCACGCCTGCCTGGGCGTCTCGCC-TGCCGACGCTTCGTGCCT------CCTGGCCCCGCCCCGTGCGGTTCGGCGGTGGGCACGGAAGCGGAGATT-GGCCCCCCATGCATCGTTGCGCGGTGGGTTAAAGTGTGGGCCGCCGGTCGGGCCGGA-CGCGGCGAGTGGTGGATTGGCATG-TACGA-CGTCGTCGAAGCGGCCTGGGTTGGGCGGTGCACCGGAGGGA--CCCACGTCGACGGT-CGCGACG-CGAGCGCT-CCTTTAGAAG Hymenocallis_glauca TCGAGCCCCGAACGGACG-ATCGCGAACTCGTAGAGCACCTGCGGGGGG-GGGCAACCGCCG-------TGGCTGCCCCAGCCGCCGTCGGCTTGCACGTACGTGCGGGACGAGCGGAGGGAACCACTTTCGGCGCGTTGCGCGCCAAGGAGCAGCCCCATTTGGAGAGCGGAGCGTGCGGCT-TGCTTA---GCGCCGCAGTGCG--ACGCGATCATGGTAC-GTCTAACTTGCATGA-CTCTCGGCAACGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAGCCATCGAGCCTTTGAACGCAAGTTGCGCCCGAGGCTGTCTGGTCAAGGGCACGCCTGCCTGGGCGTCTCGCCT-GCCGACGCTCCATGCCT------CCTGGGCCCGCCCCGTGCGGTTCGGCGGTGGGCACGGATGCGGAGATT-GGCCCCCCGTGCATCGTTGCGCGGTGGGTTAAAGTGTGGGCCGTCGGTCGGGCCGTA-GGCGGCGAGCGGTGGATTGACGTGT-ACGA-CGTCGTCGAAGCGGCCTGGGTTGGGCGGTGCACCGGAGGAA--CCCACGTCGACGGG-CGCCGCG-CGAGCGCT-CCTTTAGAAG Hymenocallis_latifolia TCGAGCCCCGAACGGACG-ATCGCGAACTCGTAGAGCACCTATGGGGGG-CAGCAACTGCCGTTCGCCATGGGTGCCCCAGCCGCCGTCGGCCTGCACGT-CGTGCGGGACGAGCGGAGGGAACCACTTTCGGCGCGTTGCGCGCCAAGGAGCAGCCCCATTTGGATAGCGGAACGTGCGGCA-AGCTTA---GCGCCGCAGTGCG--ACGCGATCGTGGTAC-GTCCAACTTGCACGA-CTCTCGGCAACGGATATCTTGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCTATCTGGTCAAGGGCACGCCTGCCTGGGCGTCTCGCCT-GCCGACGCTTCGTGCCT------CCTGGCCCCGCCCCGTGCGGTTCGGCGGTGGGCACGGAAGCGGAGATT-GGCCCCCCCTGCATCGTTGCGCGGTGGGTTAAAGTGTGGGCCGCCGGTCGGGCCGGA-CGCGGCGAGTGGTGGATTGGCATGT-ACGA-CGTCGTCGAAGCGGCCTGGGTTGGGCGGTGCACCGGAGGGA--CCCACGTCGACGGT-CGCGACG-CGAGCGCT-CCTTTAGAAG Hymenocallis_tubiflora TCGAGCCCCGAACGGACG-ATCGCGAACTCGTAGAGCACCTGTGGGGGG-CAGCAACCGCCGTTCGCCATGGGTGCCCCGGCCGCCGTCGGCTTGCACGT-CGTGCGGGACGAGCGGAGGGAACCACTTTCGGCGCGTTGCGCGCCAAGGAGCAGCCCCATAAGGAGAGCGGAGCGTGCGGCA-AGCTTA---GCGCCGCAGTGCG--ACGCGATCACGGTAC-GTCTAACCTGCACGA-CTCTCGGCAACGGATATCTTGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCCATCTGGTCAAGGGCACGCCTGCCTGGGCGTCTCGCCT-GCCGACGCTCCGTGCCT------CCTGGCCCCGCCCCGTGCGGTTCGGCGGTGGGCACGGAAGCGGAGATT-GGCCCCCCGTGCATCGTTGCGCGGTGGGTTAAAGTGTGGGCCGCCGGTCGGGCCGGA-CGCGGCGAGTGGTGGATTGGCACGT-ACGA-CGTCGTCGAAGCGGCCTGGGTTCGGCGGTGCACCGGTCGGGGACCCACGTCGACGGT-CGCGACG-CGAGCGCT-CCTTTAGAAG Ismene_vargasii TCGAGC-CCGAACGGACG-ATCGCGAACTCGTAGAGCACCTGTGGGGGG-CAGCAACCGCCGTTCTCCATGGGTGCCCCAGTCGTCGTCGGCTTGCACGT-CGTGCGGGACGAGCGGAGGGAACAACTTTCGGCGCGTTGCGCGCCAAGGAGCAGCCCCATTTGGAGAGCGGAGCGTGCGGCA-AGCTTA---GCGCCGTAG--CGCGACGCGATCATGGTAC-GTCTAACCTTCACGA-CTCTCGGCAACGGATATCTTGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCTATCTGGTCAAGGGCACGCCTGCCTGGGCGTCTCGCTT-GCCGACGCTCCATGCCT------CCTGCTCCCGCCCCGTGCGGTTCGGCGGTTGGCACGGATGCGGAGATT-GGCCCCCCATGCATCGCTGCGCGGTGGGTTAAAGTGTGGGCTGTCGGTCGGGCCGGA-CGCGGCGAGTGGTGGATTAACATGC-ACGA-CGTCGTCGAAGCGGCCTGGGTCGGGCGGTGCACCGGAGGAA--CCCACGTCGACGGG-CGCCACG-CGAGCGCT-CCCTTAGAAC Pucara_leucantha TCGAGGCCCGAACGGACG-ACCGCGAACTCGTAGAGCACCCGTGGGGGG-CAGCAATCGCCGTCCGCCTTGGGTGCCCCTTCCGCCGCCGTCTTGCACGT-CGTGCGGGGCGAGCGGGGGGAACAATTTCCGGCGCGTTGCGCGCCAAGGAGCAACCTCGTCTGCAGAGCTTAGCGCGCGGCA-AGCTTTTTCGCTGCGCTGCGCGCGAGGCGATCAAGGTAC-GTCTAACCTGCACGA-CTCTCGGCAACGGATATCTTGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCTATCTGGCCAAGGGCACGCCTGCCTGGGCGTCTCGCCTTGCCGACGCTCCATGCCT------CTCGCCCCCGCCCCGTGCGGTTCGGCGGCCGGCACGGATGCGGAGATT-GGCCCCCCACGCGTCGATGCGCGGCGGGCTGAACAGCGGGCCGTCGGCCGGGCCGGA-CGCGGCCAGTGGTGGATTGACACGC-ACGA-CGCCGTCGAAGCGGCCTGGGTCGGGCGGTGCACCGGAGGAA--CCCACGCCGACGGGGCGCCACG-TGGGTGCC-CCCTTGGAAC Stenomesson_aurantiacum TCGAGGCCCGAACGGACG-ATCGCGAACTCGTAGAGCACCCGTGGGGGG-CAGCAATCGCCGTCCGCCTTGGGTGCCCCTTCCGCCGCCGTCTTGCACGT-CGTGCGGGGCGAGCGGGGGGAACAATTTCCGGCGCGTTGCGCGCCAAGGAGCAGCCCCGTCTGGAGAGCTTAGCGCGCGGCA-AGCTTTTTTGCGGCGCTGCGCGCGAGGCGATCAAGGTAC-GTCTAACCTGCACGA-CTCTCGGCAACGGATATCTTGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCTATCTGGCCAAGGGCACGCCTGCCTGGGCGTCTCGCCTTGCCGACGCTCCATGCCT------CCCGCCCCCGCCCCGTGCGGTTCGGCGGCCGGCACGGATGCGGAGATT-GGCCCCCCACGCGTCGCTGCGCGGCGGGCAGAAGTGCGGGCCGTCGGCCGGGCCGGA-CGCGGCGAGTGGTGGATTGACACGC-ACGA-CGCCGTCGAAGCGGCCTGGGTCGGGCGGTGCACCGGAGGAA--CCCACGCCGACGGGGCGCCACG-TGGGCGA-CCCCTTGGAAC Stenomesson_chloranthum TCGAGGCCCGAACGGACG-ACCGCGAACTCGTAGAGCACCCGTGGGGGG-CAGCAATCGCCGTCCGCCTTGGGTGCCCCTTCCGCCGCCGTCTTGCACGT-CGTGCGGGGCGAGCGGGGGGAACAATTTCCGGCGCGTTGCGCGCCAAGGAGCAACCTCGTCTGGAGAGCTTAGCGCGCGGCA-AGCTTTTTCGCTGCGCTGCGCGCGAGGCGATCAAGGTAC-GTCTAACCTGCACGA-CTCTCGGCAACGGATATCTTGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCTATCTGGCCAAGGGCACGCCTGCCTGGGCGTCTTGCCTTGCCTACGCTCCATGCCT------CTCGCCCCCGCCCCGTGCGGTTCGGCGGCCGGCACGGATCCGGAGATT-GGCCCCCCACGCGTCGATGCGCGGCGGGCTGAACAACGGGCCGTCGGCCGGGCCGGA-CGCGGCCAGTGGTGGATTGACACGCTACGGACGCCGTCGAAGCGGCCTGGGTCGGGCGGTGCACCGGAGGAA--CCCACGCCGACGGGGCGCCACG-TGGGTGCC-CCCTTGGAAC Stenomesson_latifolium TCGAGGCCCGAACGGACG-ACCGCGAACTCGTAGAGCACCCGTGGGGGG-CAGCAATCGCCGTCCGCCTTGGGTGCCCCTTCCGCCGCCGTCTTGCACGT-CGTGCGGGGCGAGCGGGGGGAACAATTTCCGGCGCGTTGCGCGCCAAGGAGCAGCCTCGTCTGGAGAGCTTAGCGCGCGGCG-AGCTTTTTCGCTGCGCTGCGCGCGAGGCGATCAAGGTAC-GTCTAACCTGCACGA-CTCTCGGCAACGGATATCTTGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCTATCTGGCCAAGGGCACGCCTGCCTGGGCGTCTCGCCTTGCCGACGCTCCATGCCT------CTCGCCCCCGCCCCGTGCGGTTCGGCGGCCGGCACGGATGCGGAGATT-GGCCCCCCACGCGTCGATGCGCGGCGGGCTGAAGAGCGGGCCGTCGGCCGGGCCGGA-CGCGGCCAGTGGTGGATTGACACGC-ACGA-CGCCGTCGAAGCGGCCTGGGTCGGGCGGTGCACCGGAGGAA--CCCACGCCGACGGGGCGCCACG-TGGGTGC--CCCTTGGAAC Stenomesson_miniatum TCGAGGCCCGAACGGACG-ACCGCGAACTCGTAGAGCACCCGTGGGGGG-CAGCAATCGCCGTCCGCCTTGGGTGCCCCTTCCGCCGCCGTTTTGCACGT-CGTGCGGGGCGAGCGGGGGGAACAATTTCCGGCGCGTTGCGCGCCAAGGAGCAGCCTTGTCTGGAGAGCTTAGCGCGCGGC-GAGCTTTTTCGC{AT}GCGCTGCGCGCGAGGCGATCAAGGTAC-GTCTAACCTGCACGA-CTCTCGGC-ACGGATATCTTGG-TCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M2401] TITLE GeneCombo; LINK TAXA = Taxa1; DIMENSIONS NCHAR=1406; FORMAT DATATYPE=DNA SYMBOLS= "0 1 G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 1390 1400 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Chlidanthus_fragrans ????00TTTG0G1G0TG1G111T0GGTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTT-TTT-G0TTGG00T0GT0-----TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT100---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00-----TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT0G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT10TTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTGG00TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1T-GTT1TTT-0TTTT-1TTT-0TTT1TTTT0TTTT1TTTTT001T001T0T00T0T0T0---------------------------------T0----GTT0GTT0T0--------------------------------------------T000GT0T000G0T00GTT--1T0T0T0T0T0-----G001TT0T--------------------------1-T0----T000T------------------0T0T0----------------------------G0000TTTT-T1T1T0T0T--001T0T0T0G0T0GTT0GT0T001T0T0T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTT0G0TT10000-------T00G000TGG1T100TT0T000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTT----G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGTG0G00TT1TT00TT10TG0G-TTGT0GGG0GGG-01TT0TGT10110100010G0G01T000G11111111111111110010111111111011101111111111100000000000000000000000000000000000000000000000000000000000000000000000000000000000000 Clinanthus_humilis ????????????1G0TG1G111T01GTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTT-T---G0TTGG00T0GT0T0GT0TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT100---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00TGT00TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT10TTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTGG00TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1T-GT-1TTT-0TTTT-1TTTT0TTTT---------1TTT--------1T0T0T0T0T--------0G------------------------TT0----GTT0T0T0T0--------------------------------------------T000GT0T000G0T00GTT--1T0T0T0T0T0-----G001TT0T0T0-----------------------1TT0T0T0T000T-0T000-----------T0T0T0----------------------------T0000TTTT-T1T1T0T0T--001---------------------T001T0T1T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTT0G0TT10000-------T00G000TGG1T100TT0T000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTTTT--G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGTG0G00TT1TT00TT10TG0G-TTGT0GGG0GGG-01TT0TGT10110100010???????????1001101111111110010110000111111101111111001000001100001110111110000000000000000000000000000000000000000000000000000000000000000000 Clinanthus_incarnatus ??????????1111TTG1G111T0-GTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTT-TT--G0TTGG00T0GT0T0GT0TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT100---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00TGT00TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT10TTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TG000T1TGTGG00TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG11G0------------T1T1GTTGG-1TG1T-GTT1TTTT0TTTT-1TTT---------------------------1T0T0T0T0T--------0G------------------------TT0----GTT0T0T0T0--------------------------------------------T000GT0T000G0T00GTT--1T0T0T0T0TG-----G001TT0T0T0-----------------------1TT0T0T0T000T-0T000-----------T0T0T0----------------------------T0000TTTT-T1T1T0T0T--001---------------------T0T0T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111-----TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTT0G0TT10000-------T00G000TGG1T100TT0G000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTTTT--G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGTG0G00TT1TT00TT10TG0GGTTGT0GGG???????????????????????????????????1001101110111010010110000111111101110011001010001100111111100000000000000000000000000000000000000000000000000000000000000000000000 Clinanthus_mirabilis ?????????????????????????GTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTT-TT--G0TTGG00T0GT0T-----GGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT100---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00TGT00TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT10TTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TG000T1TGTGG00TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1T-GTT1TTT-0TTTT-1TTT1-T0T0T0T------------------1T0T0T0T0T--------0G------------------------TT0----GTT0T0T0T0--------------------------------------------T000GT0T000G0T00GTT--1T0T0T0T0-------------------------------------------------------------------------------------------------------------------------------01---------------------T0T0T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTT0G0TT10000-------T000000TGG1T100TT0T000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TG-0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00T00T00T0TT0GTTG00T0TTTTTTTT----G000G0GGTTT-GT1T10GG1TT10TT101G10TGTT1110T0TGG0--GT0G011TTGTTGTTGTG1GT0TT?????????????????????????????????????????????????????????1001101111111110010100000000111001010011001111111111000000000000000000000000000000000000000000000000000000000000000000000000000000 Eucharis_castelnaeana ??????????????????????T0GGTTTTTTT1TT100GTGTGG00011G10GG0110G00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTT-TTTTG0TTGG00T0GT0-----TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00T-------------T000G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00-----TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GT000GTGTGTTT1GTTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTG000TT1T001T11G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1TGGT-1TTT-0TTTT-1TTT-0TTTTG0TTTT---1TTT0T0------TTTG0TTTT1TTT0T01TTT0TTT0T01TTT0T0T0T001T00TT0----GTT0T0T0T0--------------------------------------------T000GT0T000G0T00GTT--1T0T0T0T0T0-----G001TT0T0T0T------------------------------T00-T-0T0T----------------------------------------0T0000T0010TT0T0T1T1T1T0T0T001T0G0T0G0T0GTT0GT0T001T001T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTTGG0TT10000000000-T00G000TGG1T100TT0T000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTT----G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGTG0G00TT1TT00TT10TG0G-TTGT0GGG0GGG-01TT0TGT1011??????????????????1010011011110110010110000000001101111111101100000000000100001001000000000000000000000000000000000000000000000000001000010111100000 Eucharis_formosa ??????????????????????????????????TT100GTGTGG00011G10GG0110G00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTT-TTTTG0TTGG00T0GT0-----TGG1110T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT000TT00TT000T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00-----TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GT000GTGTGTTT1GTTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGGG000TT1T001T1-G001T100TTT0TG0TT110TT0TTG1-G0------------T1T1GTTGG-1TG1TGGT-1TTT-0TTTT-1TTT-0TTTTT0TTTT---11TTT0T----0----------------------------1TTT0T0T0T001T00TT0----GTT0T0T0T0--------------------------------------------T000GT0T000G0T00GTT--1T0T0T0T0T0-----G0G1TT0T0T0T000---------------------------T0--T-0T0T-----------------------------------------T000-T0000TTTT-T1T1T0T0T--001T0G0T0G0T0GTT0GT0T001T001T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTTGG0TT10000000000-T00G000TGG1T100TT0T000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001TGTG0TT1GTTG0T00------T0TT0GTTG00T0T1TTTTTT----G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGTG0G00TT1TT00TT10TG0G-TTGT0GGG0GG1-01TT0TGT1?????????????????????1010111101110110010110000011000101111111101100000000000100001001000001000000000000000000000000000000000000000000000000010000011111 Eucrosia_dodsonii ??????????????????????????TGTTGTTGT0G00GTGTGG00011G10GG0110G00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTT-TTTTG0TTGG00T0GT0-----TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT100---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00-----TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT10TTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTG000TT1T001T1-G001T100TTT0TG0TT1-0TT0TTGG-00------------T1T1GTTGG-1TG1T-G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T0G0T0GTT0GTT--T0-011T0T0T0G000GTT0G1G11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T00TTT1010T1T0GGGTTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTTGG0TT10000000000-T00G000TGG1T100TT0T000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTGGG11TTTTTTGT----G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGT-0G00???????????????????????????????????????????????????????????1011111111111000000000000000001101110011000100000000000000000000000000000000000000000000000000000000000000000000000011111000000000 Eustephia_darwinii ????00TTTG0G1G0TG1G111T0GGTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTTGTTT-G0TTGG00T0GT0-----TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT100---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00-----TG0GT100TTTT100GTT1001100TT10TT1TTTTTTT10000G0T100GT0G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT10TTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTGG00TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1T-GTT11TT-0TTTT-1TTTT---------0TTTT1TTT0T001T0----------------------------------------------T0----GTT0GTT0T0T0T0----------------------------------------T000GT0T000G0T00GTT--1T0T0T0T0T0-----G001TT0T--------------------------1-T0----T000T------------------0T0T0----------------------------G0000TTTT-T0T1T0T0T--001---------------------T0T0T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTT0G0TT10000-------T00G00GTGG1T100TT0T100TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTTTT----00G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGTG0G00TT1TT00TT10TG0G-TTGT0GGG0GGG-01TT0TGT10110100010G0G0???????1111111111111111111111111111111111111100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 Hymenocallis_chiapasiana ???????????????????111T0TGTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000T000GTG000T0TGT1G00TTTTTT-TT--G0TTGG00T0GT0-----TGGT010T0GT011G00T1G0000G000TGT11G0T0G100GTTG0TTGGTT00TT100---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00TGT00TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTGGTT0GT00GTG00GTGTGTTT10TTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTGG00TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1TGGTTGGG1TG1T-GTT1TTT-0TTTT--------------------1TTT0T0----T0TTT0T0T0T0T0T0T0T0G-------------------------T0----GTT0T0T0T0T00000----------------------------------T0T0T000GT0T000G0T00GTTTT1T0T0T0T0T0-----G001TT0T0T11TT0TT0T0T1TTTTT0TT0T0T1TT0T0T0T000T-0T0T0-----------0T0T0T0T0T0-----------------------T0000TTTT-T1T1T0T0T--001---------------------T0T0TGG0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTT0G0TT10000-------T00G000TGG1T100TT0T000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T0{0G}1G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTT----GG00G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T-------------------TGTG0T00TT1TT00TT10TG0G---G????????????????????????????????????????0011100111101100010010000011111101100011000110000000000110000000000001000000111111000000000000000000000000000000000000000000000000 Hymenocallis_glauca ????????????????G1G111T0GGTTTTTTT1TT100GTGTGG00011G10GG0110G00GT0GT0GG0TTGGTTTT10T00T000T000GTG000T0TGT1G00TTTTTT-TT--G0TTGG00T0GT0-----TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT100---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00TGT00TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT10TTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTGG00TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1T-GGT1TTT-0TTTT11TTTT0TTTT---------1TTT0T0----0-TTT0T0T0---------0G------------------------GT00---GTT0T0T0T01T0TT0TT000GT0T0T000GT0TGG000G00T000GG00T0T0T0GG0T0T000G-------------------------G0011--------------------------------------------------------------------------------------------------TTTT-T1T1T0T0T--001---------------------T0T0T0G0T0GTT0GTG11T0TTTTTGTTTT0001111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTTTTT0GT0TTT1G0TTTTT0G0TT10000-------T00G000TGGGT100TT0T000TTTG00000110GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTTGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTTTTT-G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGTG0G00TT1TT00TT10TG0G-TTGT0GGG0GGG-011T0TGT10110100010G0G01T000G10011101111111100000000000011111101111111000010000100000000000100000001111111000000000000000000000000000000000000000000000000000000 Hymenocallis_latifolia ???????????????TG1G111T0GGTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000T000GTG000T0TGT1G00TTTTTT-TT--G0TTGG00T0GT0-----TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT100---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00TGT00TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGGGTTT10TTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTGG00TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1T-G{GT}T1TTT-0TTTT-1TTTT0TTTT---------1TTT0T0----T0TTT0T0T----------0G------------------------TT0GTT0GTT0T0T0T0T0000-----------------------------------T0T0T000GT0T000G0T00GTT0T0TT0T0T0T0T0T0TGG001TT0T0T------------------------1TT0T0T0TT0T0-T00T0-----------T0T0TTT0T0T0TTT00TT0TTT00TTTTTT00TTT00-TTTT-T1T1T0T0T--001---------------------T0T0T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTT0G0TT10000-------T00G000TGG1T100TT0T000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTT----G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGTG0G00TT1TT00TT10TG0G-TTGT0GGG0GGG-011T0TGT1?????????????????????0011101111111110000000000011111101111111000110000100000110000100000001000000000000000001000111000000000000000000000000000000000000 Hymenocallis_tubiflora ????????????????G1G1G1T0GGTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000T000GTG000T0TGT1G00TTTTTT-TT--G0TTGG00T0GT0-----TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT100---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00TGT00TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT10TTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTGG00TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1T-GTT1TTT-0TTTT-1TTTT0TTTT---------1TTT0T0----T0TTT0T0T--0-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T0T0000TTTT-T1T1T0T0T--001---------------------T0T0T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTG0G0TT10000-------T00G000TGG1T100TT0T000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTTT---G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGTG0G00TT1TG00TT10TG0G-TTGT0GGG0GGG-011T0TGT1011G?????????????????0011101111111110000000000011111101111111000010000000000000000100000001000000000000000000000000111000000000000000000000000000000000 Ismene_vargasii ????00TTTG0G1G0TG1G111T0GGTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000T000GTG000T0TGT1G00TTTTTT-T---G0TTGG00T0GT0-----TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT100---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00TGT00TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT10TTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0T0000T0TGTGG00TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1T-GTT1TTT-0TTTT-1TTT-------------------0T0----T0TTT0T0----------T0G------------------------TT0----GTT0T0T0T0T000GT0T000G-------0G-------------------T0T0T000GT0T000G0T00GTT--1T0T0T0T0T0T0---G001TT0T0T------------------------1TT0T0T0T000T-0T0T0-----------------------------------------T000G0000TTTT-T1T1T0T0T--001---------------------T0T0T0G0G0GTT0GTG11T0TTTTTGGTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT1-0GGGGG00TTTTT1TT0GT0TTT1G0TTTTT0G0TT11000-------T00G000TGG1T1GTTT00000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T1110T00TG0TGT0TTTGGTG00T1100TG10TGGT1T00T001G001T-T00TT1GTTG0T0T------TTTT0GTTG00T0TTTTTTTTTTTT---0G0TTTTTT1T0000GGTTT10TT101G11T00T1-10T0T11GTGTT00111TTGTTGTTGT????????????????????????????????????????????????????????????????0011101111111110010100000011111100100011000000000100000100010000000001000000000000111111111000000000000000000000000000000000000000 Pucara_leucantha ?????0TTTG0G1G0TG1G111T0GGTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTT-TTTTG0TTGG00T0GT0-----TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT000---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00-----TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT1GTTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTG000TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1T-G1-1TTT-0TTTT-1TTT-0TTTTT0TTTT---1TTT0T0---------------------------------1TTT0T0T0T0T0T00TT0----GTT0T0T0T0--------------------------------------------T00T0T0T00-T-T0-GTT0T0T0T0T000G---------T0T0--0GT0T0T------------------------------0-T0000-----------T0T0T---------------000T0T0T0T0000T0000TTTT-T1T1T0T0T--001T0G0T0G0T0GTT0GT0T001T001T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTTGG0TT0000000000--T00G000TGG1T100TT0T000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTT----G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTG-G0G00TT1TT00TT10TG0G-TTGT0GGG0GG-G01TT0TG-10110100010G0G0???????1011111111111110010000000011001101111011101100000000000110001001100000000000000000000000000000000000101111111111000000000000000000 Stenomesson_aurantiacum 100T00TTTG0G1G0TG1G111T0GGTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTT-TTT-G0TTGG00T0GT0-----TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT000---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00-----TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT1GTTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTG000TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1T-GTT1TTT-0TTTT-1TTT-0TTTTT0TTTT---1TTT0T0---------------------------------1TTT0T0T0T0T0T00TT0----GTT0T0T0T0--------------------------------------------T000GT0T000G0T00GTT--1T0T0T0T0T0-----G001TT0T0T0-------------------------------T000T00T000-----------T0T0T-----------------------0T0000T0000TTTT-T1T1T0T0T--001T0G0T0G0T0GTT0GT0T001T001T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT100GG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTTGG0TT100000000000-00G000TGG1T100TT0T100TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTT----G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGTG0G00TT1TT00TT10TG0G-TTGT0GGG0GG--01TT0TGT101101????????????????1111111111111110010110000011001101111011101100000000000010000001111110000000000000000000000000000000000000000000000000000000000000 Stenomesson_chloranthum ????00TTTG0G1G0TG1G111T0GGTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTT-TTT-G0TTGG00T0GT0-----TGGT010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT000---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00-----TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT1GTTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTG000TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1T-GTT1TTT-0TTTT-1TTT-0TTTTT0TTTT---1TTT0T0---------------------------------1TTT0T0T0T0T0T00TT0----GTT0T0T0T0--------------------------------------------T000GT0T00GT0T00GTT--1T0T0T0T0T0-----G001TT0T0-------------------------1TT0T0T0T000T-0T0T0T0000T0000T--------------------000T0T0T0T0000T0000TTTT-T1T1T0T0T--001T0G0T0G0T0GTT0GT0T001T001T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTTGG0TT0000000000--T00G000TGG1T100TT0T000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTT----G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGTG0G00TT1TT00TT10TG0G-TTGT0GGG0GG-G01TT0TG-101101????????????????1111111111111110010110000011001101111011101100000000000100000001100000000000000000000000000000000000000000000111010100000000000000 Stenomesson_latifolium ???????????????????11-T01GTTTTTTT1TT100GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTT-TTT-G0TTGG00T0GT0-----TGGT010T0GT011G00T1-0000T000TGT11G0T0G100GTTG0TTGGTT00TT000---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00-----TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT1GTTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTG000TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0TTG1G0TTG1G0T1T1GTTGG-1TG1T-GT-1TTT-0TTTT-1TTT-0TTTTT0TTT1---1TTT0T0---------------------------------1TTT0T0T0T0T0T00TT0----GTT0T0T0T0--------------------------------------------T000GT0T000G0T00GTT--1T0T0T0T0T0-----G001TT0T0-------------------------1TT0T0T0T000T-0T0T----------------------------------------0T0000T0000TTTT-T1T1T0T0T--001T0G0T0G0T0GTT0GT0T001T001T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TGT1T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1T0TTTTTGG0TT1000000000--T00G000TGG1T100TT0T000TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTT----G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTGTG0G00TT1TT00TT10TG0G-TTGT0GT1011G101TT0TG-1011??????????????????1111111111011110010110000011001101111011101100000000000100001001100000000000000000000000000000000100000000000101111000000000000000 Stenomesson_miniatum ??????????????????G11-1TGGTTTTTTT1TT10-GTGTGG00011G10GG011GG00GT0GT0GG0TTGGTTTT10T00T000----GTG000T0TGT1G00TTTTTT-TTT-G0TTGG00T0GT0-----TGGG010T0GT011G00T1G0000T000TGT11G0T0G100GTTG0TTGGTT00TT000---------T00-G000T000TGGG00TT0G101T1G0TTT0GTTGGT01101110011G00T1000TT100T1GTTT01T10TTT00-----TG0GT100TTTT100GTT1001100TT10TT1TTTTTT-10000G0T100GT1G0TG00T00G00TTG-TG0GT00GTG00GTGTGTTT1GTTT1T1T0T10TT0T0G0000T0110T1T0G01T0G0TT000T1TGTG000TT1T001T1-G001T100TTT0TG0TT1-0TT0TTG1-G0------------T1T1GTTGG-1TG1T-GTT1TTT-0TTTT-1TTT-0TTTTT0TTTT---1TTT0T0---------------------------------1TTT0T0T0T0T0T00TT0----GTT0T0T0T0--------------------------------------------T000GT0T000G0T00GTT--1T0T0T0T0T0-----G001TT0T0-------------------------------------T-0T000-----------T0T0T-----------------------0T0000T0000TTTT-T1T1T0T0T--001T0G0T0G0T0GTT0GT0T001T001T0G0T0GTT0GTG11T0TTTTTGTTTT0T01111TT111TTT10TGG0TG00TT0TG11T0TTTT1010T1T0GG0TTT010T0T010010T0T0T101TGT100GGGGG00TTTTT1TT0GT0TTT1G0TTTTTGG0TT100000000000T00G000TGG1T100TT0T100TTTG000001G0GG0TTGGGTTG1G110T0T0T0T1000G0GT0T0100T00TG0TGT0TTTGGTG00T1000TG10TGGT1T00T001G001T-T00TT1GTTG0T00------T0TT0GTTG00T0TTTTTTTT----G000G0TTTTT-GT1000GGTTT10TT101G11T00T1-10T0T1G0--GT0G011TTGTTGTTG-G0G00TT1TT00TT10-G0G-TTGT0GGG0GGG-01TT0TGT101101????????????????1111111111111110010110000011001101111111101100000000000110000001101000000000000000000000000000000111110000000000000000000000000000 ; END; BEGIN TREES; TITLE Tb6812; LINK TAXA = Taxa1; TRANSLATE 1 Eucharis_formosa, 2 Eucharis_castelnaeana, 3 Eucrosia_dodsonii, 4 Stenomesson_chloranthum, 5 Stenomesson_latifolium, 6 Pucara_leucantha, 7 Stenomesson_miniatum, 8 Hymenocallis_tubiflora, 9 Hymenocallis_latifolia, 10 Ismene_vargasii, 11 Hymenocallis_chiapasiana, 12 Hymenocallis_glauca, 13 Stenomesson_aurantiacum, 14 Clinanthus_humilis, 15 Clinanthus_incarnatus, 16 Clinanthus_mirabilis, 17 Chlidanthus_fragrans, 18 Eustephia_darwinii; TREE Fig._2 = [&R] (18,(17,(((16,(15,14))Clinantheae,((((12,8),9),11),10)Hymenocallideae),((((13,7),((6,4),5)),(2,1)),3)Stenomesseae))); END; BEGIN TREES; TITLE Tb6813; LINK TAXA = Taxa1; TRANSLATE 1 Eucharis_formosa, 2 Eucharis_castelnaeana, 3 Eucrosia_dodsonii, 4 Stenomesson_chloranthum, 5 Stenomesson_latifolium, 6 Pucara_leucantha, 7 Stenomesson_miniatum, 8 Hymenocallis_tubiflora, 9 Hymenocallis_latifolia, 10 Ismene_vargasii, 11 Hymenocallis_chiapasiana, 12 Hymenocallis_glauca, 13 Stenomesson_aurantiacum, 14 Clinanthus_humilis, 15 Clinanthus_incarnatus, 16 Clinanthus_mirabilis, 17 Chlidanthus_fragrans, 18 Eustephia_darwinii; TREE Fig._3 = [&R] (18,(17,(((16,(15,14))Clinantheae,((12,((11,9),8)),10)Hymenocallideae),(((13,(7,(6,4),5)),(2,1)),3)Stenomesseae))); END; BEGIN TREES; TITLE Tb6814; LINK TAXA = Taxa1; TRANSLATE 1 Eucharis_formosa, 2 Eucharis_castelnaeana, 3 Eucrosia_dodsonii, 4 Stenomesson_chloranthum, 5 Stenomesson_latifolium, 6 Pucara_leucantha, 7 Stenomesson_miniatum, 8 Hymenocallis_tubiflora, 9 Hymenocallis_latifolia, 10 Ismene_vargasii, 11 Hymenocallis_chiapasiana, 12 Hymenocallis_glauca, 13 Stenomesson_aurantiacum, 14 Clinanthus_humilis, 15 Clinanthus_incarnatus, 16 Clinanthus_mirabilis, 17 Chlidanthus_fragrans, 18 Eustephia_darwinii; TREE Fig._4 = [&R] (18,(17,(((16,(15,14))Clinantheae,((((12,8),9),11),10)Hymenocallideae),((((13,7),((6,4),5)),(2,1)),3)Stenomesseae))); END; BEGIN TREES; TITLE Tb6811; LINK TAXA = Taxa1; TRANSLATE 1 Eucharis_formosa, 2 Eucharis_castelnaeana, 3 Eucrosia_dodsonii, 4 Stenomesson_chloranthum, 5 Stenomesson_latifolium, 6 Pucara_leucantha, 7 Stenomesson_miniatum, 8 Hymenocallis_tubiflora, 9 Hymenocallis_latifolia, 10 Ismene_vargasii, 11 Hymenocallis_chiapasiana, 12 Hymenocallis_glauca, 13 Stenomesson_aurantiacum, 14 Clinanthus_humilis, 15 Clinanthus_incarnatus, 16 Clinanthus_mirabilis, 17 Chlidanthus_fragrans, 18 Eustephia_darwinii; TREE Fig.1 = [&R] (18,(17,((((16,15),14)Clinantheae,(12,(11,10,9,8))Hymenocallideae),(((13,7),(6,4),5,(2,1)),3)Stenomesseae))); END;