#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 23, 2024; 22:13 GMT TreeBASE (cc) 1994-2008 Study reference: Rodriguez C.S., Marques A., Stampar S.N., Morandini A.C., Christiansen E., & Genzano G.N. 2011. The Taxonomic Position of the Pelagic ‘Staurozoan’ Tessera Gemmaria as a Ceriantharian Larva. Zootaxa, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S11498] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=24; TAXLABELS Acropora_palifera Allopathes_robillardi Aurelia_aurita Carybdea_marsupialis Cassiopea_sp. Ceriantharia_sp._Larvae Ceriantheomorphe_brasiliensis Ceriantheopsis_americana Cerianthus_borealis Edwardsia_timida Gardineria_hawaiiensis Haliclystus_antarcticus Haliclystus_tenuis Hormathia_pectinata Hydrocoryne_iemanja Isarachnanthus_sp._ss.08 Lophogorgia_chilensis Olindias_sambaquiensis Phialella_quadrata Primnoa_pacifica Renilla_muelleri Stichopathes_variabilis Stomphia_selaginella Zoanthus_sociatus ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M8835] TITLE 16S_Ceriantharia; LINK TAXA = Taxa1; DIMENSIONS NCHAR=787; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .] Acropora_palifera -------------------------------------------------------------ATATCTTAAAAGGTTAGTAGGGCTAACTTAATAAAGATAATTAAATGGCC--GCGGTAACACTAACCGTGAAAATGTAGCGTAATCAATAGTCAATTAATTGTTGGCCGGTATGAATGGTGTCACGAGGGTCTCACTGTCTTAAGGAAATCTCCAGTGAAATTGAATTTGTAGTGA-AGATGCTACATCCAAATT--GTTAGACGAGAAGACCCCATGGAACTTTACTGGAAACTTATGTGG----------CTGACTTAAATAGTTTTAAAA------------TGTGGTGCGGATTAATTAGGGTTAAAAAGT--TCACT-TTTTTATTTGAAGAAAGGCAACTCAAAAACTTA--------------------TATCTTTGGGATTTGAT-----AAGTGGGACAGTTTGGTTGGGGCGATCGCCTTTAAAAGAGTAACGAAG----GCGGGCTTAAGATATA----------------------------------------TATTTGGTTAT-----GTCTGACTGC-CAGGGGGAAACCTAGAGCAGACACT-TATCTTTGGATGGTGGGTTTAAGTGACCCGTT--AATTTAGGGTGAAATAGTTAACGATAAACAAATAAAAGTTACCCTGGGGAT---------------------------------------------------------------------------------- Allopathes_robillardi ----------------------------------------------------------------------ATTCCCAGTGAAATTGAAATCGTAGTGAAGATGCTACGTCCAAATTGTTAGACGAAGAGACCCCATTGAGCTTTACTGGAAACTTAT--ACGGCTGAAATATATTTGCTCATAAAAAATAATCTCAACAAGATCTATTAAGAGTGAGGAA----AAAAATAAACTTA--AATAAATAGCTAAAATT--ATGTGGTGAAAGA----TATT----TT-ATCGAAGTTTTGTT-----------TTTCGATCCTTTT-CTCATAGAGAAAAAACAATCTTAACTCAAAGACT----TAGACTAATGGAA-ACCACT-CTTTTATTTTAAGAGAGCTAACTCTTCTTTATG-------AT--------------GAGAGGAATAATGT-----AAGTTGGACAGTTTGGTTGGGGCGACCGCCTTTAAAAAAGTAACGAAG----GTGAGCTTAAGGTGCA----------------------------------------TAATTAATAGCA-GTAGCCTGACTGC-AAGGGGGACGTTCCGAGCAGACACT---AGGAACCG--TCAAGAAACTATTGT---TT--GATCCAGGCTTTTTGGTTCCCATAAAGACTTAGAAAAA------CAAGTTCTTGGAGCGGAGGAAAGTGGG-CTATAATGACCCGTTAATT------------------------------------------ Aurelia_aurita -------------------------------------------CTCTTGTAAGGTGAAGCC----TGCCCAATGACTGCCAATAATCTAATA-AAAATCAGTTCAATGGCC--GCGGTAACTCTGACCGTGATAAAGTAGCATAATCACTTGTCACTTAATTGGTGACTGGAATGAATGGCTAAACGAATCCTCCTCTGTCTCTGAAGAAATCCTGGCAAATTTGAAATAGCAGTGA-AGATGCTGCTAAATAATT--GTAAGACGAAAAGACCCTATCGAGCTTTACTGGAATCT-----------------------TGCAAAGT------AACATAGTTATTAAAGAC-AAAATTATACAAAT--TGCAAGCCCGACAGT----TTGGTTGG--GGCGACCACCCCTAAAAACGTATCAGGGGAACTCTAA-A---------GGCTGT-CATAA-TATGAAAAACCGCCTTACTGG-------------AGACAAACAAGTCAA----TCAGTTATAATTTA----------------------------------T--------AGGACATATTGACCCGTTATTTAGCTTCACAACAAATAACGACTA--TGAAAAAAGTTACCG--TAGGGATAACAGGGTAATAT--TTTCAGAGAGTTCATATCGATGAAAATGTTTGCCA-------------------------------------------------------------------------------------------------- Carybdea_marsupialis ------------------------------------------------GCTAACTGA--TT----TAAATAGTTAGTGTAGCCTGCCCACTG-ACTCTAAGTTGAAGGGCC--GCGGTAACTCTGACCGTGCTAAGGTAGCATAATCACTCGCCGCCTAATTAGCGGATGGAATGAATGGCTGAACGAGCCTCTCTCTGTCTCAGTATCGGATCAAGTGAAATTAAACTAGTTGTCA-AGATGCAACTGATTCTTG--GAAAGACGAGAAGACCCCGT-GAGCTTTACTCTAACCC-----------------------TTC----------------------TAACAGT-GAAACGAGAGAAGT--GAAAGG------AGT----TTGGTTGG--GGCGACCTCCCAAACAGAAGAAACTTGGGAAAAC-AA-A---------GGTATA-GGTAA-T--TGAAAACAACTTAACAGGT------------AGGGTAACACCCCAG----CCTGATAGTATAGAC---------------------------------T--------AGGTTATAGTGATCCACCTTCTAATGAAGGTGTAAATGA----------ATAAAAGTTACCA--CGGGGATAACAGGGTAATCT--TATCCTAGAGTTCCTATCGAAGATAGGGTTTGCCA-------------------------------------------------------------------------------------------------- Cassiopea_sp. -----------------------------------------------------------------------------------------------------TTAAATAGCC--GCGGTAACTCTGACCGTGATAAAGTAGCATAATCACTCGTCATTTAATTGGTGACTAGAATGAATGGTTTTACGAATTTCCAACTGTCTCAGTAATAAAATTAATGAAATTAAACCAATAGTGA-AGATGCTATTTATAAATT--GTAAGACGAAAAGACCCTATCG??CTTTACTAA?CGCT-----------------------TAAATAAA------TAAATACTACAAAATATT-TTAGGACAAAAATA--TTTAAGCTAATTAGT----TTGGTTGG--GGCGACCACCTCTAAAAAAGTATCAGAGGAGATCTAACG---------GTTAAT-ATTAA-TATAAAAAA--GCCTAACTGC-------------ATATAAATACATTAA----TCAGTTACAACAAG----------------------------------T--------AGGATATAATGACCGTTGGGACTATCTAA--ACACCTAACGATTA--CAAAAAAAGTTACCG--TAGGGATAACAGGGTAATAT--TCTCGAAGAGTTCTTATCGATGAGAATGTTTGCCACCTCGATGTTGAATTATGATATCCTAAAGGTGCAAAAGCTTTTAAGGGTTGGTCTGTTC--------------------------------------- Ceriantharia_sp._Larvae --CATAGCCACTTGCTAAAGAAACACTGAGGTATCGGAGGTGAAGCCTGCCCTATGGTTGGACC-TGAAATAAATGAACAATGAGTTATTTATAAAGACAATTAAATGGAT--GCGGTAACCCTAACCGTAATAATGTAGCGTAATTAATCGTCAATTAATTGTTGACAAGTATGAATGGCGTCACGAGTGCTTGACTGTCTGAAGACAAGGCCCAATGAAATTGAATTCGTGGTTC-AGATGCTACGTAATTTTG---TAAGACGAGAAGACCCTATTAAGCTTTACTGGAAACTTATGCTG----------------TCATAATAAATAGTTGTAAGGAGTGGGAAGTG-AGAATTATAAACCAATTATAGATTTGAAAGA----CAAGATCGCAAATGAAAATAAATAGGTATGTTGGACAGTTTGGTTGGGG---------CGACTCCCTAAG-AAATGATAACTAAGGGGCACTA------------AGGTAATAAAGCCTG----ACTGTCAGAGGGCACT-------------------------CAAACAGACACGGAAGTGGGTATAGCGAACCGTTA-ATAAAAGTGAAATAGTTAACGATAAACGAATAAAAGTTACTA--TAGGGATAACAGCGTTATAT--TGTTAGAGAGTACACATCAACAACAGTGTTTGCGACCTCGATGTTGAATTGCGGCATCCTAAGGGTGCAGAAGCTCTAAAGGGTTGGTCTGTTCGACTATTAAAGCCTTACAT-------------------- Ceriantheomorphe_brasiliensis --CATAGCCACTTGCCAAAGGAACGCTGACGTATAGGAGGTGAAGCCTGCCCTATGGTTGTATCTGAAAAAATAACAAAGAAGTTGTTTATA--AAGACAATTTAATGGCC--GCGGTATACCTAACTGTGAAAATGTAGCGCAATCAATCGTCAATTAATTGTTGACAAGTATGAATGGCGTCACGAGTGCTTGACTGTCTTAAGAAAACCCCCAATGAAATTGAATTCGTAGTTA-AGATGCTACGTAGTTTTG---TAAGACGATAAGACCCTATTAAGCTTTACTGGAAACTTATACTGTCTTAA-------TAAATAGTTGTTATAGATGGGAAGTGTTTAATTTC-TCGATTATATAAAGTATAATAGTTATATCTT----TAAGTAAATACTAAACCAATTATATATATGAAAGACTATAAAGCACTCAT--------ATAATGAAATAG-TATGTTAGGCAGTTTGGTTGGGGCGACTCCCTAAAAAATGATAACTGAGGGGCACTAAGGTAATAAAGATAAAGCTTGACTGTTAGAGGGCTCTCAAACAGACACGAAAGTGGGTAAATCGAACCGTTA-ATTAAAGTGTTATTGTTAACGATAAACGAATAAAAGTTACTA--TAGGGATAACAGCGTAATAT--TGTTAGAGAGTTCACATCAACGACAATGTTTGCGACCTCGATGTTGAATTGCGGCCTCCTAAGGGTGCAGAAGCTCTGTAAGGTTAGTCTGTTCGACTATTAAAGCCTTACAT-------------------- Ceriantheopsis_americana ----------------AAAGGAACTCTAAAGTATAGGAGGTGAAGCCTGCCCTATGGTTGTAT--CTGAAAGAATAACGAAGTAGTTATTTATAAAGACAATTTAATGGCC--GCGGTATTCCTGACTGTGAAAATGTAGCGCAATCAATCGTCAATTAATTGTTGACAAGTATGAATGGCGTCACGAGTGCTTGACTGTCTTAAGAAAAACCCCAATGAAATTGAATTCGTAGTTA-AGATGCTACGTAAATTTG---TAAGACGAAAAGACCCTATTAAGCTTTACTGGAAGCTTATATTGT---------------CTTAGTAAAAACTGTAATAGATGGGAGATGTTGTTAATCAATTTAATTTTATTATTCTGTAAGT----TTATACCA-----TACCAATAATATATATGAAAGACTATTTTGCCATCAA--------AGAAAGAATTAG-TATGTTAGACAGTTTGGTTGGGGCGACTCCCTTAAAAATGATAACTGAGGGGCACTAAGGTAATAAAGAAAGAGCTTGACTGTTAGAGGGCCCTCAAACAGACACTAAAGTGGGTAAATTGATCCGTTA-ATACAAGTGGAATTGTTAGCGATAA{AG}CGAATAAAAGTTACTA--TAGGGATAACAGCGTAATAT--TGTTAGAGAGTTCACATTAACAACAATGTTTGCGACCTCGATGTTGAATTGCGGCATCCTAAGGGTGCAGCAGCTCTTTAAGGTTAGTCTGTTCGACTATTAAA----------------------------- Cerianthus_borealis ----------------AAAGGAGCCCTAAAGTATAGGAGGTGAAGCCTGCCCTATGGTTGTACC-TGAAATAATAACAAAGCA-GTTATTTATAAAGACAATTTAATGGCC--GCGGTATACCTGACTGTGAAAATGTAGCGCAATCAATCGTCAATTAATTGTTGACAAGTATGAATGGCGTCACGAGTGCTTGACTGTCTTAAGAAAAAACCCAGTGAAATTGAATTCGTAGTTA-AGATGCTACGTAATTTTG---TAAGACGAAAAGACCCTATTAAGCTTTACTGGATGCTTATGTTGTCTTAATAAATAGATATAATGAATGGTTAATGCATATTAAATAAGATAATTAATATAGTTAATAAAGAAGAAATAGTAATATTCTTATTCAGTATATTTAATCCTTTATATCAATATAAATGAAAGACTATTTCTCCACTTAAGAATGGATTAG-TATGTTAGACAGTTTGGTTGGGGCGACCCCCTTAAAAAGGATAACTGAGGGGCACTAAGGTAATAAAGAAAGAGCTTGACTGTAAGAGGGCCCTCAAACAGACACGAAAGTGGGTAAATTGACCCGTTA-ATAAAAGTGGGATTGTTAACGATAAACAAATAAAAGTTACTA--TAGGGATAACAGCGTAATAT--TGTTAGAGAGTTCACATTAACAACAATGTTTGCGACCTCGATGTTGAATTGCGGCATCCTGAGGGTGCAGAAGCTCTTAAAGGTTAGTCTGTTCGACTATGAAA----------------------------- Edwardsia_timida ---------------------------------------------------------------------------------------------------------------------------------TGATAATGTAGCGTAATCAATAGCCAATTAATTGTTGGCCGGTATGAATGGCGTCACGAAGGCCCCACTGTCTCAAGAAGACCTCCCGTGAAATTGAATTCGTAGTGA-AGATGCTACGTCCAAATT--GTAAGACGAAAAGACCCCATTGAGCTTTACTAAAAACTTGCA--------------TGGCTT-AAGTAACTTAAATAAAGAGTTTAGATAATGTGGGAGCTGT-TAAGGCTTATGAAACACCACT-CTTTTATTTTAAGAGAGCTAACCTT-TA--------------------------------GGGACAATGC-----TAGTTGGATAGTTTGGTTGGGGCGACCACCTTTTAAAAGGTAACGAAG----GTGAGCTTAAGGTCCG----------------------------------------TAATTAATAACAAGTGGCCTGACTGA-GAGGGGGACACTCCGAACAGACACTGGGTTTCA-----GTGGGCTATAATGACCCGTC--GTTTTTAAGTGATATAGGCGACGATTAACGAATAAAAGCTACCATGGGGA----------------------------------------------------------------------------------- Gardineria_hawaiiensis --------------------------------------------------------------------------------------------GAATGGTGTTACGAAGGTCTTACTGTCTTAAGAAAATTCTCAGCGAAATTGAATTTGTAGTGAAG--ATGCTACATCCAAATTGTTAGACGAGAAGTCCCTATGGAACTTTACTGGAGACTTATGTGGCTTTAACTTGTGACTTACAAATAGATAGGTTATACT--CTGTGGCGACAGT----CGTT----TTATCTAAAGACCAGCC-----------CTCTGAT----TGACTCTTTGGGG-----------TGGTCTTTGGGCT-----AGGTTGGTAAAG-CCCACT-CTTCTATTTTAAGAAAGCAGCAACTTTTCTAAA-------AGTT----TGTGCGGTAAGAGTTATGTTGTTTGGTAAGTTAGACAGTTTGGTTGGGGCGACTGCCTTTTAAAGAGTAACGAAG----GCGGGCTTAAGATACA----------------------------------------TA-TCAACAACT-GTTGTCTGACTGCGAAGGGGAAGGCCCTGAGCAGACACT---AGGTAGTG--GTGGGTTATAGTGACACGTT--AATTTAAGGTGAAATAGTTAACGATAAACAGATAAAAGT---------------------------------------------------------------------------------------------- Haliclystus_antarcticus -----------------------------CCTATTAGAGGTGACGCCTGCCCGATGG--TT----TATCCTAAGTTAATCACC--ATTAACG-AACCTGAACTCAATGGCC--GCGGTATTTCTGACCGTGATAATGTAGCGAAATCAATCGTCACTTAATTGCTGACCCGTATCAAAGGTATTACGAATGTTCCCCTGTCTCAAGAAAAACCCCTGTGAAATTGAAGGGGCCGTGC-ATATGCGGCCTAATCTCC-TGTAAGACGAAAAGACCCTATTGAGCTTTACTATAACCT-----------------------TTTCTCAAAACACTAAGGAAACGAGCAACCCT-CTAACCTTAGTCTTA-GGGAAGGCTGGTAGT----TTCGTTGG--GGCGACGACCTTTCAAAAAGTAACAAAGGTTAGCGATGG---------TTTTCTATTTAA-T--GAATCTTAGCCTGACTGTT------------TGGCTTATAAGCCTA----CCAGACACCTTCG-----------------------------------T--------GAGCCATAATTTTCCATTTTAAGGGAAACCTTAAAATGCC----ATAATATAAAAGTTACCA--TAGGGATAACAGCGTAATTT--TGTCGAAGAGCTCTTATCGATGACAAAGATTGCGACCTCGATGTTGAATTATGGTATCCTGGGGGTGTAGCCGC----------------------------------------------------------- Haliclystus_tenuis ------------------GCCCCTAGACCCCTATTAGAGGTGACGCCTGCCCGATGG--TT----TAACCTAAACTAACTAAC--GTTAGTG-AACCTGAATTCAATGGCC--GCGGTATTTCTGACCGTGATAATGTAGCGAAATCAATCGTCACTTAATTGCTGACCTGTATCAAAGGTATTACGAATGTTCCGCTGTCTCAAGAAAAACCCCTGTGAAATTGAAGGGGCCGTGC-ATATGCGGCCCACCATCCCTGTAAGACGAAAAGACCCTATTGAGCTTTACTATACCCT-----------------------TTTCTTAAATTTGCTGGAAAATAAACAACTTT-TAGATCCAGCTGGCA-GGAAAGGGAGGTAGT----TTCGTTGG--GGCGACGACCTTTTAAAAAGTAACAAAGGTTAGCAATGG---------TGAACT-CCCAA-T--GA-TAAAAGCCTGACTGTT------------TGGTCTATCAACCTA----ACAGACACTATTG-----------------------------------T--------GTGCCATAGTTTTCCATCTTAGGCAAACACCTAAGATGCC----ATAATATAAAAGTTACCA--TAGGGATAACAGCGTAATTT--TGTCGAAGAGCTCTTATCGATGACAAAGATTGCGACCTCGATGTTGAATTGTGGTATCCTGGGGGTGTAGCCGCTCCCAAGGGTTGGTCTGTTCGACCATTAAAAC--------------------------- Hormathia_pectinata -----------------------------------------------------------------------------------------------------------------------TCACTGACCGTGATAATGTAGCGTAATCAATAGCCAATTAATTGTTGGCCGGTATGAATGGCATCACGAAGGCCCCACTGTCTTAAGAGGACTCTCCATGAAATTGAATTCGTAGTGA-AGATGCTACGTCCATATT--GTAAGACGAAAAGACCCCATTGAGCTTTACTAAAGACTTGTA--------------TGGCTCGAAATAACTTAAATAAAAAGTTTAGATAATGTGGGATCCGTTTTTGGTTAATGAAACACCACT-CTTTTATTTTAAGAGAGCTAACCTTGTA--------------------------------GGGAGAATGC-----AAGTTGGATAGTTTGGTTGGGGCGACCACCTTTTAAAAGGTAACGAAG----GTGAGCTTAAGGTCCG----------------------------------------TAATTAATAGCTGGTGGCCTGACTGC-AAGGGGGACATCCCGAGCAGACAC--GTCCTTAGGGATGTGGGTTATAGTGACCCGTCATTTTTTAGAGTGGAATAATTGACGATCAACGAATAAAAGCTACCATGGGG------------------------------------------------------------------------------------ Hydrocoryne_iemanja GACTGTTTACCAAAAACATAGCCCTTATAAATATTGAAGGTGAAACCTGCCCAATGGTTTA----TGAT-TAAAATTTTAATATAATTA-AA-AAT--AAACTTAAAGGAC--GCGGTA-TCTTGACCGTGATAATGTAGCATAATCATTCGCCACTTAATTAGTGGATAGTATGAATGGTGAAACGAATATAACACTGTCTCAAATAAAAACCTTATAAAATTGAAATAATAGTTA-AGATACTATTTAAAA-CT--GTAAGACGAGAAGACCCTATAGAGCTTAACTACAACTT-----------------------TT-------------------------------ATAATTAAAA------GCTTGGT-----AGT----TTAGTTGG--GGCGACTACCTTC-TAAAATAAACGAAGGTAAAC----A---------AA-----ATTAA-T--AAAAAT-AATTTA-TTGTA------------TAACCAATAAGTTTA----ACAATTACTATAG-----------------------------------T--------AGGTTATAATGACCCGTTATATATTCATAGAAAATATAGCGATTAATAAATAAAAGCTACCT--TAGGGATAACAGGATAATCC--TGTTCTAGAGATCTTATCGAATACAGGGTTTGTCACCTCTATGTTGAATTGAGATATCCTAAAAATGCAGCAGTTTTTAAGGGTGGGTCTGTTCGACCCATAAAATCTTACATGATTTGAGTTCATTCCGTA- Isarachnanthus_sp._ss.08 --CATAGCCACTTGCTAAAGAAACACTGAGGTATCGGAGGTGAAGCCTGCCCTATGGTTGGACC-TGAAATAAATGAACAATGAGTTATTTATAAAGACAATTAAATGGAT--GCGGTAACCCTAACCGTAATAATGTAGCGTAATTAATCGTCAATTAATTGTTGACAAGTATGAATGGCGTCACGAGTGCTTGACTGTCTGAAGACAAGGCCCAATGAAATTGAATTCGTGGTTC-AGATGCTACGTAATTTTG---TAAGACGAGAAGACCCTATTAAGCTTTACTGGAAACTTATGCTG----------------TCATAATAAATAGTTGTAAGGAGTGGGAAGTG-AGAATTATAAACCAATTATAGATTTGAAAGA----CAAGATCGCAAATGAAAATAAATAGGTATGTTGGACAGTTTGGTTGGGG---------CGACTCCCTAAG-AAATGATAACTAAGGGGCACTA------------AGGTAATAAAGCCTG----ACTGTCAGAGGGCACT-------------------------CAAACAGACACGGAAGTGGGTATAGCGAACCGTTA-ATAAAAGTGAAATAGTTAACGATAAACGAATAAAAGTTACTA--TAGGGATAACAGCGTTATAT--TGTTAGAGAGTACACATCAACAACAGTGTTTGCGACCTCGATGTTGAATTGCGGCATCCTAAGGGTGCAGAAGCTCTAAAGGGTTGGTCTGTTCGACTATTAAAGCCTTACAT-------------------- Lophogorgia_chilensis ----------------TAAAGGTTGCTGAAGTATAGAGGGTGAATTCTGCCCAATGGTTGTACAGTGAAACTAAGGACTAACGTCTAAAGCG-AAACCCAACTGAATGGCC--GCGGTAACTCTGACCGTGATAATGTAGCACAATAAATAGCCAATTAATTGTTGGCGGGTATGAATGGAACCACGAGGGTCTTACTGTCTCAAGAGGAAAGCCGATGAAATTATAGTTGTAGTGA-AGATACTACATAAACATT--GTAAGACGAAAAGACCCTATCGAGCTTTACTGGATACCGATAGCGT------------TAACCTAAAATGATCGATACTAAGTATCCTAATTT-TGAGTTAATAATTTT-TGTTGGTAGGACAGT----TTAGTTGG--GGCGACTACCTTTGAATAAGAAACGAAGGCGAGCTTATG---------GTATAC-AAAGC-TAATCTCATTAGCCTGACAGTG------------AGGGGGACACCCCTA----GCTGGCACAAGGACT-----------------------ACGT--------CCTATGTGGGCGATAATGACCCGATATGATAGTCCAAAATAAATATCGA-AAGCGGATAAAAGCTACCG--TAGGGATAACAGCGTAATAT--TGTCGGAGAGTTCTTATCGAGGACAGTGTTTGCGACCTCGATGTTGAATTGCGGTGCCCTGGTGCTGTAGAAGGTACCTTAGGTTGGTCTGTTCGACCATGAA------------------------------ Olindias_sambaquiensis ---------------------CCTTAGGATAGATTAAAGGTGCAACCTGCCCTATGGTTTT----TAAA-TAAGTTAATAAATTAATAA-TA-AACTAAAACTAAATGGCC--GCGGTAACTCTGACCGTGATAATGTAGCGAAATCAATCGTCGTTTAATTGACGACCAGTATGAATGGTTAAACGAATTTTCCACTGTCTCAAATATAAAGTCACTTAAATTCAAATAATAGTGA-AGATGCTATTTAAAAACT--ATAAGACGAGAAGACCCTATAGAGCTTAACTATAATCT-----------------------ACTTAAAT------TACTCGATTAA--ATATC-GAAACAAAGGTA----GGCTGGT-----AGT----TTGGTTGG--GGCGACCGTTTTC-TAAAAGTAACGAAAACAAGC----A---------ATGGTG-AATAA-T--GAAAGTTGACTTAATTGTT------------TAATACATAAATTTA----ACAAATACTAAAG-----------------------------------T--------AGGACATAATGACCCGTTGATTTTTAAAAATAAAAACAACGATAAATAAATAAAAGCTACCT--TAGGGATAACAGCGTAATCT--TGTTTTAGAGTTCCTATCGACGACAAGGTTTGCGACCTCGATGTTGAATTGCGATAACCTGAGGGTGTAGAAGTTCTCAAGGGTTGGTCTGTTCGACCATTAAAATCTTACATGATTTGGTCATTTTCCCGAA Phialella_quadrata -------------------AGCCCCAGATAAAATCTGAGGTGTAACCTGCCCAATGGTTTC----TAATATAAAGATATAAAAGTTCTT-TA-ATG--AAATTAAAAGGAC--GCGGTAACCTTGACCGTGATAATGTAGCATAATCACTCGCCATTTAATTGGTGGATAGTATGAATGGTTGAACGAATATTTCGCTGTCTTAAGAAGAAACATAA-AAAATTGAAATAATAGTTA-AGATGCTATTTTTTA-CT--GTAAGACGAAAAGACCCTATAGAGCTTAACTATAATCT-----------------------TTTTATAA------TAAAAGAAAAACAATTCT-ATAATTAAAAA-----GATTGGT-----AGT----TTAGTTGG--GGCGACTATCTTC-TATAAATAACGAAGATAAGC----A---------AT-----GTTAA-T--AGAAA---ACTTA-TTGTA------------TAACAAAAATGTTTA----ACAATTATAAAAA-----------------------------------T--------AGGCTATAATGACCCGTTAATTCTTCATAATTAGATTAACGATTAATTAATAAAAGCTACCT--TAGGGATAACAGGATAATTT--CATTTTAGAGTTCCTATCGAAAATGAAGTTTGTCACCTCTATGTTGAATTAAGATATCCTGATAATGCAGCAGTTATCAAAGGTAGGTCTGTTCGACCTTTAAAATCTTA----------------------- Primnoa_pacifica -----------------AAGGTTTACTGAAGTATAGAGGGTGAATTCTGCCCAATGGTTGTATAGTGAAACTGAGGACTAACGTCTAAAGCG-AAACCCAACTGAATGGCC--GCGGTAACTCTGACCGTGATAATGTAGCACAATAAATAGCCAATTAATTGTTGGCGGGTATGAATGGAACCACGAGGGTCTTACTGTCTCAAGAGGAAAGCCGATGAAATTATAATTGTAGTGA-AGATACTACATAAACATT--GTAAGACGAAAAGACCCTATCGAGCTTTACTGGATACCGATAGCGT------------TAATTTAGAATGATCGATACTAAGTATCCTAATTC-TAAGTTAATAATTTT-TGTTGGTAGGACAGT----TTAGTTGG--GGCGACTACCTTTGAATAAGAAACGAAGGCGAGCTTATG---------GTATTA-TTGA---AATCTCATTAGCCTCACAGTG------------AGGGGGACACCCCTA----GCTGGCACAAGGACTTACCCACATAGTATATAGTATATACGTAATGGGTTCCTATGTGGGCGATAGTGACCCGATATGATTATCCAAAATAAATATCGA-AAGCGGATAAAAGCTACCG--TAGGGATAACAGCGT-------------------------------------------------------------------------------------------------------------------------------------------- Renilla_muelleri -----------------------------------------------------------------------------------------------------CTGAATGGCC--GCGGTAACTCTGACCGTGATAATGTAGCACAATAAATAGCCAATTAATTGTTGGCGG-TATGAATGGAACCACGAGGGTCTTACTGTCTCAAGAGAAAAGCCAATGAAATTATAATTGTAGTGA-AGATACTACATAAACATT--GTAAGACGAAAAGACCCTATCGAGCTTTACTGGATACCGATAACGT------------TAACTTAGAATGATCGATACTAAGTACCCTAATTC-TAAGTTAATAAATTT-TGTTGGTAAGACAGT----TTAGTTGG--GGCGACTACCTTTGAATAAGAAACGAAGGCGAGCTTATG---------GTATTA-ATAA---AATCTCATTAGCCTCACAGTG------------AGGA--ACACCCCTA----GCTGACACAAGGACCT-----------------------CGCTA-GGGTTCCTATGTGGGCGATAGTGACCCGATATTATTATCCAAAAGAAATATCGA-AAGCGGATAAAAGCTACCG--TAGGGATAACA-CGTAATAT--TGTCGGAGAGTTCTTATCGAGGACAGTGTTTGCGACCTCGATGTTGAATTGCGGTGTCCTGGTGCTGTAGAAGGT---------------------------------------------------------- Stichopathes_variabilis -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGA----AAATTAAAACTTA--AATAAATAGCTAAAATT--ATGTGGTGAAAAA----TATT----TTTATCGAAGTTTTGTT-----------TTTCGGTTCTTTTTCTCTTAGAGAAAAAA---TCTTAATTCAAATACTCC-GTAGACTAATGGAA-ACCACT-CTTTTATTTTAAGAGAGCTAACTCTTTTTCATG-------ATTTATATCTAATGATGGGAGGAATAATGT-----AAGTTGGACAGTTTGGTTGGGGCGACCGCCTTTTAAAAAGTAACGAAG----GTGAGCTTAAGGTGCA----------------------------------------TAAATAATATCA-GCAGCCTGACTGC-AAGGGAGACGTTCCGAGCAGACACT---TGTTCCCG--TCAAGAAGCCATTGT---TT--GATCCAAGCTTTGGGGTTCCCATAAAGACTTAGAAAAAAAAAAACAAGTTTCTGGGACCGGAAAAAGTGGGGCTATAATGACCCGT----------------------------------------------- Stomphia_selaginella ------------------------------------------------------------------------------------------------------------------GGGGATCACTGACCGTGATAATGTAGCGTAATCAATAGCCAATTAATTGTTGGCCGGTATGAATGGCGTCACGAAGGCCCCACTGTCTTAAGAGGACTCTCCATGAAATTGAATTCGTAGTGA-AGATGCTACGTCCATATT--GTAAGACGAAAAGACCCCATTGAGCTTTACTAAAGACTTACA--------------TGGCTCAAAATAACTTAAATAAAAAGTTTAGATAATGTGGGATCCGTCTCCGGCTAATGAAACACCACT-CTTATATTTTAAGAGAGCTAACCTCACA--------------------------------GGGATAGTGT-----AAGTTGGATAGTTTGGTTGGGGCGACCGCCTTTTAAAAGGTAACGAAG----GTGAGCTTAAGGTCCG----------------------------------------TAGTTAATAGCCGGTGGCCTGACTGC-AAGGGGGACATCCCGAGCAGACACTGGTAATTATCCA-GTGGGCTATAGTGACCCGTC--TTCTTAGAGTGGAATAGTTGACGATCAACGAATAAAAGCTACCATGGGGATCA-------------------------------------------------------------------------------- Zoanthus_sociatus -----------------------------------GAGGGTGATGCCTGCCCAATGGTTGTATCTAAAAGCGGTTGATAAAAGTTGACCTCGTAAGGACAATTGAATGGCC--GCGGTAACACTGACCGTGATAATGTAGCGTAATCAATAGCCAATTAATTGTTGGCCAGTATGAATGGCGCCACGAAGGCCCCACTGTCTTAAGGAAATTCCCAGTGAAATTGAATTCGTAGTGA-AGATGCTACGTCCAATTT--GTTAGACGAAAAGACCCCGTTGAGCTTTACTGGAGCACTTACATGG-------CCCCGGCCTTCCCATGCCTGGGAACCGGCCGAATTTAAATGGGCGGCT----TAGATTATGTGGC-AGCCCC-CCGCTGGGGCAAATGAAACACCACTCCCCCATGTCAAAGGGGCTAACCCCCCCCCTTGGGGGGACAGTGT-----AAGTAGGACAGTTTGGTTGGGGCGACCACCTTTTAAAAAGTAACGAAG----GTGCGCTTAAGGTGCG----------------------------------------CAATTAATGACT-GAAGCCTGACTGC-GAGGGGGACACCCCGAGCAGACACCCCAAAGCCCGC--CCGAAAGGCGGCGGTGGGGT--GG----------------------------------------------------------------------------------------------------------------------------------- ; END; BEGIN TREES; TITLE 16S_Ceriantharia; LINK TAXA = Taxa1; TRANSLATE 1 Cerianthus_borealis, 2 Ceriantharia_sp._Larvae, 3 Isarachnanthus_sp._ss.08, 4 Ceriantheopsis_americana, 5 Ceriantheomorphe_brasiliensis, 6 Hormathia_pectinata, 7 Edwardsia_timida, 8 Stomphia_selaginella, 9 Primnoa_pacifica, 10 Lophogorgia_chilensis, 11 Phialella_quadrata, 12 Haliclystus_tenuis, 13 Haliclystus_antarcticus, 14 Hydrocoryne_iemanja, 15 Aurelia_aurita, 16 Cassiopea_sp., 17 Acropora_palifera, 18 Zoanthus_sociatus, 19 Renilla_muelleri, 20 Carybdea_marsupialis, 21 Allopathes_robillardi, 22 Stichopathes_variabilis, 23 Olindias_sambaquiensis, 24 Gardineria_hawaiiensis; TREE tree_1 = [&R] ((18:0.2248045391,(17:0.236170019,((7:0.054727932,(6:0.0199487288,8:0.0426134762):0.0456069666):0.0795988495,(24:0.44156323,(21:0.0704173807,22:0.0293123108):0.5416850367):0.3877853617):0.0186489912):0.1089689185):0.4565396617,(((2:1.0E-10,3:1.0E-10):0.0841481639,(5:0.0483036359,(1:0.0731607491,4:0.0539887486):0.0620436706):0.0510357843):0.1160147676,((19:1.0754E-6,(9:0.0083252345,10:0.0293756417):0.0276097199):0.2715947284,((12:0.0655312656,13:0.0885643105):0.2968646787,((23:0.1258890636,(11:0.1351132178,14:0.1145515472):0.1318865837):0.0990258106,(16:0.1653210394,(15:0.2085713019,20:0.4255707077):0.0648287227):0.136231873):0.0326502006):0.0981387802):0.2603583315):0.4565396617); END;