#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 19, 2024; 3:34 GMT TreeBASE (cc) 1994-2008 Study reference: Pavlic D., Slippers B., Coutinho T., Gryzenhout M., & Wingfield M.J. 2004. Lasiodiplodia gonubiensis sp. nov., a new Botryosphaeria anamorph from native Syzygium cordatum in South Africa. Studies in Mycology, null. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S1220] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=25; TAXLABELS Botryosphaeria_corticola_CBS_112545 Botryosphaeria_corticola_CBS_112551 Botryosphaeria_dothidea_CMW_8000 Botryosphaeria_dothidea_CMW_9075 Botryosphaeria_eucalyptorum_CMW_10125 Botryosphaeria_eucalyptorum_CMW_10126 Botryosphaeria_lutea_CMW_9076 Botryosphaeria_lutea_CMW_992 Botryosphaeria_obtusa_CMW_7774 Botryosphaeria_obtusa_KJ_93_56 Botryosphaeria_parva_CMW_10124 Botryosphaeria_parva_CMW_9081 Botryosphaeria_rhodina_CMW_10130 Botryosphaeria_rhodina_CMW_9074 Botryosphaeria_rhodina_KJ_93_27 Botryosphaeria_rhodina_ZS_96_112 Botryosphaeria_rhodina_ZS96_172 Botryosphaeria_stevensii_CMW_7060 Botryosphaeria_stevensii_SZ_94_6 Botryosphaeria_tsugae Diplodia_pinea Guignardia_philoprina Lasiodiplodia_gonubiensis_CMW_14077 Lasiodiplodia_gonubiensis_CMW_14078 Mycosphaerella_africana ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M1283] TITLE ITS; LINK TAXA = Taxa1; DIMENSIONS NCHAR=534; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Botryosphaeria_corticola_CBS_112545 GGAAGGATCATTACCGAGT----GCTACGAGCGAGAGCTCGTTACCTCCCACCCTTTGTGAACATACCTCTGTTGCTTTGGCGGCTCTCGCCGCGAGGGGAGGCCCTGAAAAGGGCCCGCCCCCCTCGCGCGCCCTCCGCCAGAGGACCTTCAAACTCCAGTCAGTAAACGTCGACGTCTGATACACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCGCCGTCCTCTCTGCGGACGCGCCTCAAAGACCTCGGCGGTGGCTGTCCAGCCCTCAAGCGTAGTAGAATACAC--CTCGCTTTGGAGCGGCTGGCGTCGCCCGCCGGACGAACCTTCTGAACT-TTTCTCAAGGTTGACCTCGGAT Botryosphaeria_corticola_CBS_112551 GGAAGGATCATTACCGAGT----GCTACGAGCGAGAGCTCGTTACCTCCCACCCTTTGTGAACATACCTCTGTTGCTTTGGCGGCTCTCGCCGCGAGGGGAGGCCCTGAAAAGGGCCCGCCCCCCTCGCGCGCCCTCCGCCAGAGGACCTTCAAACTCCAGTCAGTAAACGTCGACGTCTGATACACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCGCCGTCCTCTCTGCGGACGCGCCTCAAAGACCTCGGCGGTGGCTGTCCAGCCCTCAAGCGTAGTAGAATACAC--CTCGCTTTGGAGCGGCTGGCGTCGCCCGCCGGACGAACCTTCTGAACT-TTTCTCAAGGTTGACCTCGGAT Botryosphaeria_dothidea_CMW_8000 GGAAGGATCATTACCGAGTTGATTCGGGCTCCGG---CCCGATCC-TCCCACCCTTTGTGTACCTACCTCTGTTGCTTTGGCGGGCCGCGGTCCTCCGCGGCCGGCCCCCCTCCCCGGGGGG-TGGCCAGCG---CCCGCCAGAGGACCATCAAACTCCAGTCAGTAAACGATGCAGTCTGAAAAACAT-TTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCACCGTCCT--TTGCGGGCGCGCCTCAAAGACCTCGGCGGTGGC-GT-CTTGCCTCAAGCGTAGTAGAACATACATCTCGCTTCGGAGCGCAGGGCGTCGCCCGCCGGACGAACCTTCTGAACT-TTTCTCAAGGTTGACCTCGGAT Botryosphaeria_dothidea_CMW_9075 ---AGGATCATTACCGAGTTGATTCGGGCTCCGG---CCCGATCC-TCCCACCCTTTGTGTACCTACCTCTGTTGCTTTGGCGGGCCGCGGTCCTCCGCGGCCGCCCCCCTCCCCGGGGGGG-TGGCCAGCG---CCCGCCAGAGGACCATCAAACTCCAGTCAGTAAACGATGCAGTCTGAAAAACAT-TTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCACCGTCCT--TTGCGGGCGCGCCTCAAAGACCTCGGCGGTGGC-GT-CTTGCCTCAAGCGTAGTAGAACATACATCTCGCTTCGGAGCGCAGGGCGTCGCCCGCCGGACGAACCTTCTGAACT-TTTCTCAAGGTTGACCTCGGAT Botryosphaeria_eucalyptorum_CMW_10125 GGAAGGATCATTACCGAGTTGACTCGAGCTCCGG---CTCGACTC-TCCCACCCTATGTGTACCTACCTCTGTTGCTTTGGCGGGCCGCGGTCCTCCGCACCGGCTCCCTTT----GGGGG-CTGGCCAGCG---TCCGCCAGAGGACCACAAAACTCCAGTCAGTAAACGTTGCAGTCTGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTTTGCTTGGTATTGGGCCCCGTCCT--CTGTGGACGCGCCTCAAAGACCTCGGCGGTGGC-GT-CTTGCCTCAAGCGTAGTAGAAATCAC--CTCGCTTTGGAGCGCATGGCGTCGCCCGCCGGACGAACCTT-TGAATT-TTTCTCAAGGTTGACCTCGGAT Botryosphaeria_eucalyptorum_CMW_10126 GGAAGGATCATTACCGAGTTGACTCGAGCTCCGG---CTCGACTC-TCCCACCCTATGTGTACCTACCTCTGTTGCTTTGGCGGGCCGCGGTCCTCCGCACCGGCTCCCTTT----GGGGG-CTGGCCAGCG---TCCGCCAGAGGACCACAAAACTCCAGTCAGTAAACGTTGCAGTCTGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTTTGCTTGGTATTGGGCCCCGTCCT--CTGTGGACGCGCCTCAAAGACCTCGGCGGTGGC-GT-CTTGCCTCAAGCGTAGTAGAAATCAC--CTCGCTTTGGAGCGCATGGCGTCGCCCGCCGGACGAACCTT-TGAATT-TTTCTCAAGGTTGACCTCGGAT Botryosphaeria_lutea_CMW_9076 GGAAGGATCATTACCGAGTTGATTCGAGCTCCGG---CTCGACTC-TCCCACCCCATGTGTACCTACCTCTGTTGCTTTGGCGGGCCGCGGTCCTCCGCACCGACCCCCG--TTC-GGGGGGCCGGCCAGCG---CCCGCCAGAGGACCACAAAACTCCAGTCAGTAAACGTCGCAGTCTGAGAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCT--CTGTGGACGCGCCTCGAAGACCTCGGCGGTGGC-GT-CTTGCCTCAAGCGTAGTAGAAAACAC--CTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGAACCTT-TGAATTATTTCTC?A?GGT?ACCTCGGAT Botryosphaeria_lutea_CMW_992 GGAAGGATCATTACCGAGTTGATTCGAGCTCCGG---CTCGACTC-TCCCACCCCATGTGTACCTACCTCTGTTGCTTTGGCGGGCCGCGGTCCTCCGCACCGACCCCCGTTC---GGGGGGCCGGCCAGCG---CCCGCCAGAGGACCACAAAACTCCAGTCAGTAAACGTCGCAGTCTGAGAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCT--CTGTGGACGCGCCTCGAAGACCTCGGCGGTGGC-GT-CTTGCCTCAAGCGTAGTAGAAAACAC--CTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGAACCTT-TGAATT-TTTCTCAAGGTTGACCTCGGAT Botryosphaeria_obtusa_CMW_7774 GGAAG?ATCATTACCGAGTT--CTCGGGCTTCGG---CTCGAATC-TCCCACCCTTTGTGAACATACCTCTGTTGCTTTGGCGGCTCTTTGCCGCGAGGAGGCCCTCGCGGG-----CCCCCCCGCGCGCTT---TCCGCCAGAGGACCTTCAAACTCCAGTCAGTAAACGTCGACGTCTGATAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCGCCGTCCTCTCTGCGGACGCGCCTTAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAGTAGAATACAC--CTCGCTTTGGAGCGGTTGGCGTCGCCCGCCGGACGAACCTTCTGAACT-TTTCTCAAGGTTGACCTCGGAT Botryosphaeria_obtusa_KJ_93_56 GGAAGGATCATTACCGAGTT--CTCGGGCTTCGG---CTCGAATC-TCCCACCCTTTGTGAACATACCTCTGTTGCTTTGGCGGCTCTTTCCCGCGAGGAGGCCCTCGCGGG-----CCCCCCCGCGCGCTT---TCCGCCAGAGGACCTTCAAACTCCAGTCAGTAAACGTCGACGTCTGATAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCGCCGTCCTCTCTGCGGACGCGCCTTAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAGTAGAATACAC--CTCGCTTTGGAGCGGTTGGCGTCGCCCGCCGGACGAACCTTCTGAACT-TTTCTCAAGGTTGACCTCGGAT Botryosphaeria_parva_CMW_10124 GGAAGGATCATTACCGAGTTGATTCGAGCTCCGG---CTCGACTC-TCCCACCCTATGTGTACCTACCTCTGTTGCTTTGGCGGGCCGCGGTCCTCCGCACCGGCGCCC---TTC-GGGGGGCTGGCCAGCG---CCCGCCAGAGGACCATAAAACTCCAGTCAGTGAACTTCGCAGTCTGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCCCCGTCCT--CCACGGACGCGCCTTAAAGACCTCGGCGGTGGC-GT-CTTGCCTCAAGCGTAGTAGAAAACAC--CTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGAAC-TT-TGAATTATTTCTCAAGGTTGACCTCGGAT Botryosphaeria_parva_CMW_9081 GGAAGGATCATTACCGAGTTGATTCGAGCTCCGG---CTCGACTC-TCCCACCCTATGTGTACCTACCTCTGTTGCTTTGGCGGGCCGCGGTCCTCCGCACCGGCGCCC---TTC-GGGGGGCTGGCCAGCG---CCCGCCAGAGGACCATAAAACTCCAGTCAGTGAACTTCGCAGTCTGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCCCCGTCCT--CCACGGACGCGCCTTAAAGACCTCGGCGGTGGC-GT-CTTGCCTCAAGCGTAGTAGAAAACAC--CTCGCTTTGGAGCGCACGGCGTCGCCCGCCGGACGAACCTT-TGAATTATTTCTCAAGGTTGACCTCGGAT Botryosphaeria_rhodina_CMW_10130 GGAAGGATCATTACCGAGTT--TTCGGGCTTCGG---CTCGACTC-TCCCACCCTTTGTGAACGTACCTCTGTTGCTTTGGCGGCT-CC?GCCGCC---------------------------------------------AAAGGACCTTCAAACTCCAGTCAGTAAACGCAGACGTCTGATAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGAATTGGGCACCGTCCTCACTGCGGACGCGCCTCAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAGTAGAATACAC--CTCGCTTTGGAGCGGTTGGCGTCGCCCGCCGGACGAACCTTCTGAACT-TTTCTCAAGGTTGACCTCGGAT Botryosphaeria_rhodina_CMW_9074 GGAAGGATCATTACCGAGTT--TTCGAGCTCCGG---CTCGACTC-TCCCACCCTTTGTGAACGTACCTCTGTTGCTTTGGCGGCT-CCGGCCGCC---------------------------------------------AAAGGACCTTCAAACTCCAGTCAGTAAACGCAGACGTCTGATAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGAATTGGGCACCGTCCTCACTGCGGACGCGCCTCAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAGTAGAATACAC--CTCGCTTTGGAGCGGTTGGCGTCGCCCGCCGGACGAACCTTCTGAACT-TTTCTCAAGGTTGACCTCGGAT Botryosphaeria_rhodina_KJ_93_27 GGAAGGATCATTACCGAGTT--TTCGGGCTTCGG---CTCGAC-C-TCCCACCCTTTGTGAACGTACCTCTGTTGCTTTGGCGGCT-TCGGCCGCC---------------------------------------------AAAGGACCTTCAAACTCCAGTCAGTAAACGCAGACGTCTGATAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGAATTGGGCACCGTCCTCACTGCGGACGCGCCTCAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAGTAGAATACAC--CTCGCTTTGGAGCGGTTGGCGTCGCCCGCCGGACGAACCTTCTGAACT-TTTCTCAAGGTTGACCTCGGAT Botryosphaeria_rhodina_ZS_96_112 GGAAGGATCATTACCGAGTT--CTCGGGCTTCGG---CTCGACTC-TCCCACCCTTTGTGAACGTACCTCTGTTGCTTTGGCGGCT-CCGGCCGCC---------------------------------------------AAAGG-CCTTCAAACTCCAGTCAGTAAACGCAGACGTCTGATAA-CAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGAATTGGGCACCGTCCTCACTGCGGACGCGCCTCAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAGTAGAATACAC--CTCGCTTTGGAGCGGTTGGCGTCGCCCGCCGGACGAACCTTCTGAACT-TTTCTCAAGGTTGACCTCGGAT Botryosphaeria_rhodina_ZS96_172 GGAAGGATCATTACCGAGTT--TTCGAGTTTCGGG--CTCGACTC-TCCCACCCTTTGTGAACGTACCTCTGTTGCTTTGGCGGGCTCCGGCCGCC---------------------------------------------AAAGGACCTTCAAACTCCAGTCAGTAAACGCAGACGTCTGATAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGAATTGGGCACCGTCCTCACTGCGGACGCGCCTCAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAGTAGAATACAC--CTCGCTTTGGAGCGGTTGGCGTCGCCCGCCGGACGAACCTTCTGAACT-TTTCTCAAGGTTGACCTCGGAT Botryosphaeria_stevensii_CMW_7060 GGAAGGATCATTACCGAGTT--CTCGAGCTTCGG---CTCGAATC-TCCCACCCTTTGTGAACATACCTCTGTTGCTTTGGCGGCTCTTG-CCGCGTGGAGGCCCTCAAAAA----GCCCCCCCGTGCGCT----TCCGCCAGAGGACCTTCAAACTCCAGTCAGTAAACGTCGACGTCTGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCGACGTCCTCTCTGCGGACGCGCCTCAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAATAGAATACAC--CTCGCTTTGGAGCGGTTGGCGTCGCCCGCCGGACGAACCTTCTGAACT-TTTCTCAAGGTTGACCTCGGAT Botryosphaeria_stevensii_SZ_94_6 CGAAGGATCATTACCGAGTT--CTCGGGCTTCGG---CCCGAATC-TCCCACCCTTTGTGAACATACCTCTGTTGCTTTGGCGGCTCTTG-CCGCGTGGAGGCCCTCAAAA-----GCCCCCCCGCGCGCT----TCCGCCAGAGGACCTTCAAACTCCAGTCAGTAAACGTCGACGTCTGAAAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCGCCGTCCTCTCTGCGGACGCGCCTCAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAGTAGAATACAC--CTCGCTTTGGAGTGGTTGGCGTCGCCCGCCGGACGAACCTTCTGAACT-TTTCTCAAGGTTGACCTCGGAT Botryosphaeria_tsugae GGAAGGATCATTACCGAGTT--TC-GGG-TTCGG---CC-GAATC-TCCCACCCTTTGTGAACACACCTCTGTTGCTTTG-CGGCTCTTGCCGCGCGGGGGGCCCCCCTGAA-GGCCGCCCCGCGCGCGCT----TCCGCCAGAGGACCTTCAAACTCCAGTCAGTAAACGTCGACGTCTGATAAACAAGTCAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCGCCGTCCTCTCTGCGGACGCGCCTCAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAGTAGAATACAC--CTCGCTTTGGAGCGGCTGGCGTCGCCCGCCGGACGAACCTTCTGAACT-TTTCTCAAGGTTGACCTCGGAT Diplodia_pinea GGAAGGATCATTACCGAGTT--CTCGGGCTTCGG---CTCGAATC-TCCCACCCTTTGTGAACATACCTCTGTTGCTTTGGCGGCTCTTTGCCGCGAGGAGGCCCTCGCGGG-----CCCCCCCGCGCGCTT---TCCGCCAGAGGACCTTCAAACTCCAGTCAGTAAACGTCGACGTCTGATAAACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCGCCGTCCTCTCTGCGGACGCGCCTTAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAGTAGAATACAC--CTCGCTTTGGAGCGGTTGGCGTCGCCCGCCGGACGAACCTTCTGAACT-TTTCTCAAGGTTGACCTCGGAT Guignardia_philoprina GGAAGGATCATTACCGAGTTTACAACTCCCAAACCCATGTGAACATACCTA--------TTGTTGCTTCGGCGG-GATTGCCCCGGGCGCCTCGTGTGCCCCGGATCAGGCGCCCGCCTAGG-AAACTTAACTCTTGTTTTATTTTGGAATCTTCT------------------GAGTAGTTTTTAC----AAATAAATAAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCTGAGCGTCATTTCAACCCTCATGCCCC--------TAGGGCGTGGTGTT----GGGGATCGGCC--AAAGCCCGCGAGGGACGGCCGGCCCCTAAATCTAGTGGCGGACCCGTCGTGGCCTCCTCTGCGAAGTAGTGATATTCCGCATCGGAGAGCGACGAGCCCCT---GCCGTTAAACCCCCAAC Lasiodiplodia_gonubiensis_CMW_14077 GGAAGGATCATTACCGAGTT--TTCGAGCTTCGG---CTCGACTC-TCCCACCCTTTGTGAACATACCTCTGTTGCTTTGGCGGCT-CCGGCCGCC---------------------------------------------AAAGGACCTTCAAACTCCAGTCAGTAAACGCAGACGTCTGAAATACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCTCCCTGGGGACGCGCCTCAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAGTAGAATACAC--CTCGCTTTGGAGCGGTTGGCGTCGCCCGCCGGACGAACCTTCTGAACT-TTTCTCAAGGTTGACCTCGGAT Lasiodiplodia_gonubiensis_CMW_14078 GGAAGGATCATTACCGAGTT--TTCGAGCTTCGG---CTCGACTC-TCCCACCCTTTGTGAACATACCTCTGTTGCTTTGGCGGCT-CCGGCCGCC---------------------------------------------AAAGGACCTTCAAACTCCAGTCAGTAAACGCAGACGTCTGAAATACAAGTTAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCTCCCTGGGGACGCGCCTCAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAGTAGAATACAC--CTCGCTTTGGAGCGGTTGGCGTCGCCCGCCGGACGAACCTTCTGAACT-TTTCTCAAGGTTGACCTCGGAT Mycosphaerella_africana ----GGATCATTACTGAGTGAGGGCTCACGCCCGACCTCCAACCCTTTGTGAACCAACTCTGTTGCTTCGGGGGCGACCCCGCCGTTTCGGCGACGGCGGCCCCCGGAGGTCATC--------AAACACTGCATC-----------------------------------TTTGCGTCGGAGTCTTAAAGTAAATTAAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTAGCTTGGTATTGGGCGTCGCGGTTCCGCGCGCCTT-----AAAGTCTCCGGCTGAGCAGTTCGTCTCTAAGCGTTGTGGC-----------------------------ATATATTTCGCTGAAAGAGTTCGGGACGGCTTTTGGCCGTTAAATCTTTCTT ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = ITS) = N: 1-534; CODONPOSSET CodonPositions (CHARACTERS = ITS) = N: 1-534; END; BEGIN TREES; TITLE Tb6983; LINK TAXA = Taxa1; TRANSLATE 1 Mycosphaerella_africana, 2 Lasiodiplodia_gonubiensis_CMW_14078, 3 Lasiodiplodia_gonubiensis_CMW_14077, 4 Guignardia_philoprina, 5 Diplodia_pinea, 6 Botryosphaeria_tsugae, 7 Botryosphaeria_stevensii_SZ_94_6, 8 Botryosphaeria_stevensii_CMW_7060, 9 Botryosphaeria_rhodina_ZS96_172, 10 Botryosphaeria_rhodina_ZS_96_112, 11 Botryosphaeria_rhodina_KJ_93_27, 12 Botryosphaeria_rhodina_CMW_9074, 13 Botryosphaeria_rhodina_CMW_10130, 14 Botryosphaeria_parva_CMW_9081, 15 Botryosphaeria_parva_CMW_10124, 16 Botryosphaeria_obtusa_KJ_93_56, 17 Botryosphaeria_obtusa_CMW_7774, 18 Botryosphaeria_lutea_CMW_992, 19 Botryosphaeria_lutea_CMW_9076, 20 Botryosphaeria_eucalyptorum_CMW_10126, 21 Botryosphaeria_eucalyptorum_CMW_10125, 22 Botryosphaeria_dothidea_CMW_9075, 23 Botryosphaeria_dothidea_CMW_8000, 24 Botryosphaeria_corticola_CBS_112551, 25 Botryosphaeria_corticola_CBS_112545; TREE ITS = [&R] (((((14,15),((19,18),(21,20))),(23,22)),((((((17,16),5),(8,7)),6),(25,24)),((12,((13,11,10),9)),(2,3)))),(4,1)); END;