#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 25, 2024; 13:03 GMT TreeBASE (cc) 1994-2008 Study reference: Brullo S., & Downie S.R. 2012. Siculosciadium, a new monotypic genus of Apiaceae from Sicily. Annals of the Missouri Botanical Garden, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S12922] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=13; TAXLABELS Aethusa_cynapium Dichoropetalum_achaicum Dichoropetalum_aromaticum Dichoropetalum_carvifolia Dichoropetalum_golestanicum Dichoropetalum_paucijugum Dichoropetalum_pschawicum Dichoropetalum_schottii Dichoropetalum_scoparium Dichoropetalum_seseloides Ormosolenia_alpina Ormosolenia_pisidica Peucedanum_nebrodense ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M13486] TITLE Siculosciadium_DNA; LINK TAXA = Taxa1; DIMENSIONS NCHAR=611; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Aethusa_cynapium TCGAATCCTGCAA-TAG-CAGAATGACCCGCTAACACGTAAACAATTTGGGCAAGCGTCGGGGGGCCTTGGTCCCCTGTCTGCGAATCCCTGGTAGGTGGCCACTCCCGGGTGGCCACTGGCCTGCAAAAATCATTCGGGCGCGGAATGCGCCAAGGACCTT-AAAACTGAATTGTACGTCCGTATCCCGTTAGCGGGCAACGGCGTCGTTCCAAAA-CACAACGACTCTCGACAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCACTAGGCCGAGGGCACGTCTGCCTGGGTGTCACGCATCGTCTTGCCC-ACAAACCACTCACTCCTGAGAAGTTGTGCCGGTTTGGGGGCGGAAACTGGCCTCCCGTGCCTTGTCGTGCGGTTGGCGGAAAGGCGAGTCTCCGGCGATGGACGTCGCGACATCGGTGGTTGTAAAAGGCCCTCTTGTCTTGTCGCGCGAATCCGCGTCATCTTAGCGAGCTCCAGGACCCTTAGGCGGCACAC---ACTCTGTGCG--CTTCGA Dichoropetalum_achaicum TCGAATCCTGCAAATAG-CAGAATGACCCGCTAACTCGTAAACAATTTGGGCAAGCGTCGGGGGGCCTTGGTCCCCTGTCTGCGAATCCCTGGTAGGTGGCCACTCCCGGGTGGCCACTGGCCTGCAAAAATCATTCGGGCGCGGAATGCGCCAAGGACCTTAAAAACTGAATTGTACGTCCGTATCCCGTTAGCGGGAAACGGCGTCGTTCCAAAA-CAC??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????ATCGTCTTGCCC-GCAAACCACTCACTCCTGCGAAGTTGTGCCGGTTTGGGGGCGGAAACTGGCCTCCCGTGCCTTGTCGTGCGGTTGGCGGAAAAGCGAGTCTCCGGCGACGGACGTCGCGACATCGGTGGTTGTAAAATGCCCTCCTGTAGTGTCGCGCGAATCCTCGTCATCTTAGCGAGCTCCGGGACCCTAAGGCGGCACAGAGTACTCTGTGCGAGCTTCGA Dichoropetalum_aromaticum TCGAATCCTGCAAATAGGCAGAATGACCCGCTAACTCGTAAACAATTTGGGCAAGCGTCGGGGGGCCTTGGTCCCCTG-CTGCGAATCCCTGGTAGGTGGTCACTCCCGGGTGGCCACTGGCCTGCAAAA-TCATTCGGGCGCGGAATGCGCCAAGGACCTT-AAAACTGAATTGTACGTCCGAATCCCGTTAGCGGGAAACGGCGTCGTTCCAAAA-CACAACGACTCTCGACAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCACTAGGCCGAGGGCACGTCTGCCTGGGTGTCACGCATCGTCTTGCCCCGCAAACCACTCACTCCTGCGAAGTTGTGCCGGTTTGGGGGCGGAAACTGGCCTCCCGTGCCTTGTCGTGCGGTTGGCGGAAAAGCGAGTCTCCGGCGACGGACGTCGCGACATCGGTGGTTGTAAAATGCCCTCTTTTATTGTCGCGCGAATCCTCGTCATCTTAGCGAGCTCCGGGACCCTTAGGCGGCATAGAGTACTCTGTGCGCGCTTCGA Dichoropetalum_carvifolia TCGAATCCTGCAAATAG-CAGAATGACCCGCTAACTCGTAAACCATTTGGGCAAGCGTCGGGGGCCCTTGGTCCCCTGTCCGCGAATCCCTGGTAGGTGGCCACTCCCGGGTGGCCACTGGCCTGCAAAA-TCATTTGGGCGCGGAATGCGCCAAGGACCTT-AAAACTGAATTGCACGTCTGTATCCCGTTAGCGGGAAACGACGTCGTTCCAAAA-CAC??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????ATCATCTTGCCC-GCAAACCACTCACTCCTGCGAAGTTGTGCCGGTTTGGGGGCGGAAACTGGCCTCCCGTGCCTTGTCGTGCGGTTGGCGGAAAAGCGAGTCTCCGGCGACGGACGTCGCGACATCGGTGGTTGTAAAATGCCCTCTTGTATTGTCGCGGGGATCCTCGTCATCTTAGCGAGCTCCAGGACCCTTAGGCGGCACAGAGTACTCTGTGCGCGCTTCGA Dichoropetalum_golestanicum TCGAATCCTGCAAATAG-CAGAATGACCCGCTAACTCGTAAACAATTTGGGCAAGCGTCGGGGGCCCTTGGTCCCCTGTCTGCGAATCCCTGGTAGGTGGCCACTCCCGGGTGGCCACTGGCCTGCAAAA-TCATTCGGGCGCGGAATGCGCCAAGGACCTT-AAAACTGAATTGTACGTCCGCATCCCGTTAGCGGGAAACGGCGTCGTTCCAAAA-CACAACGACTCTCGACAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCACTAGGCCGAGGGCACGTCTGCCTGGGTGTCACGCATCGTCTTGCCC-GCAAACCACTCACTCCTGCGAAGTTGTGCCGGTTTGGGGGCGGAAACTGGCCTCCCGTGCCTTGTCGTGCGGTTGGCGGAAAAGCGAGTCTCCGGCGACGGACGTCGCGACATCGGTGGTTGTAAAAGGCCCTCTTGTCTTGTCGCGCGAATCCTCGTCATCTTAGCGAGCTCCAGGACCCTTAGGCGGCACAGAGTACTCTGTGCGAGCTTCGA Dichoropetalum_paucijugum TCGAATCCTGCAAATAGGCAGAATGACCCGCTAACTCGTAAACAATTTGGGCAAGCGTCGGGGGGCCTTGGTCCCCTGTCTGCTAATCCCTGGTAGGTGGTCACTCCCGGGTGGCCACTGGCCTGCAAAA-TCATTCGGGCGCGGAATGCGCCAAGGACCTT-AAAACTGAATTGTACGTCCGTATCCCGTTATCGGGAAACGACGTCGTTCCAAAA-CACAACGACTCTCGACAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCAGAAGCCACTAGGCCGAGGGCACGTCTGCCTGGGTGTCACGCATCGTCTTGCCC-GCAAACCACTCACTCCTGCGAAGTTGTGCCGGTTTGGGGGAGGAAATTGGCCTCCCGTGCCTTGTTGTGCGGTTGGCGGAAAAGCGAGTCTTCGGCGATGGACGCCGCGACATCGGTGGTTGTAAAATGCCCTCTTGTATTGTCGTGCGAATCCTCGTCGTCTTAACGAGCTCCGGGACCCTTAGGCGGCACAGAGTACTCTGTGCGCGCTTTGA Dichoropetalum_pschawicum TCGAATCCTGCAAACAG-CAGAATGACCCGCTAACTCGTAAACCATTTGGGCAAGCGTCGGGGGCCCTTGGTCCCCTGTCCGCGAATCCCTGGTAGGTGGCCACTCCCGGGTGGCCACTGGCCTGCAAAA-TCATTCGGGCGCGGAATGCGCCAAGGACCTT-AAAACTGAATTGCACGTCCGTATCCCGTTAGCGGGAAACGGCGTCGTTCCAAAA-CAC??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????ATCATCTTGCCC-ACAAACCACTCACTCATGCGAAGTTGTGCCGGTTTGGGGGCGGAAACTGGCCTCCCGTGCCTTCTCGTGCGGTTGGCGGAAAAGCGAGTCTCCGGCGACGGACGTCGCGACATCGGTGGTTGTAAAATGCCCTCTTGTATTGTCGCGGGAATCCTCGTCATCTTAGCGAGCTCCAGGATCCTTAGGCGGCACAGAGTACTCTGTGCGCGCTTCGA Dichoropetalum_schottii TCGAATCCTGCAAATAG-CAGAATGACCCGCTAACTCGTAAACAATTTGGGCAAGCGTCGGGGGGCCTTGGTCCCCTGTCTGCGAATCCCTGGTAGGTGGCCACTCCCGGGTGGCCACTGGCCTGCAAAA-TCATTCGGGCGCGGAATGCGCCAAGGACCTTAAAAACTGAATTGTACGTCCGTATCCCGTTAGCGGGAAACGGCGTCGTTCCAAAA-CAC??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????ATCGTCTTGCCC-GCAAACCACTCACTCCTGCGAAGTTGTGCCGGTTTGGGGGCGGAAACTGGCCTCCCGTGCCTTGTCGTGCGGTTGGCGGAAAAGCGAGTCTCCGGCGACGGACGTCGCGACATCGGTGGTTGTAAAATGCCCTCTGGTATTGTCGCGCGAATCCTCGTCATCTTAGCGAGCTCCGGGACCCTTAGGCGGCACAGAGTACTCTGTGCGCGCTTCGA Dichoropetalum_scoparium TCGAATCCTGCAA-TAG-CAGAATGACCCGCTAACTCGTAAACAATTTGGGCAAGCGTCGGGGGGCCTTGGTCCCCTGTCTGCAAGTCCCTGGTAGGTGGTCACTCCCGGGTGGCCACTGGCCTGCAAAA-TCATTCGGGCGCGGAATGCGCCAAGGACCTT-AAAACTGAATTGTACGTCCGTATCCCGTTAGCGGGAAACGGCGTCGTTCCAAAAACAC??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????ATCGTCTTGCCC-GCAAACCACTCACTCCTGCGAAGTTGTGCCGGTTTGGGGGCGGAAACTGGCCTCCCGTGCCTTGTCGTGCGGTTGGCGGAAAAGCGAGTCTCCGGCGACGGACGTCGCGACATCGGTGGTTGTAAAATGCCTTCTTGTATTGTCGCGCGAATCCTCGTCATCTTAACGAGCTCCGGGACCCTTAGGCGGG-CGCAAAATACTCTGTGCGCCTC-A Dichoropetalum_seseloides TCGAATCCTGCAAATAGGCAGAATGACCCGCTAACTCGTAAACAATTTGGGCAAGCGTCGGGGGGCCTTGGTCCCCTGTCTGCGAATCCCTGGTAGGTGGTCACTCCCGGGTGGCCACTGGCCTGCAAAA-TCATTCGGGCGCGGAATGCGCCAAGGACCTT-AAAACTGAATTGTACGTCCGTATCCCGTTAGCGGGAAACGGCGTCGTTCCAAAA-CACAACGACTCTCGACAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCACTAGGCCGAGGGCACGTCTGCCTGGGTGTCACGCATCGTCTTGCCA-GCAAACCACTCACTCCTGCGAAGTTGTGCCGGTTTGGGGGCGGAAACTGGCCTCCCGTGCCTTGTCGTGCGGTTGGCGGAAAAGCGAGTCTACGGCGACGGACGTCGCGACATCGGTGGTTGTAAAATGCCCTCTTGTATTGTCGCGCGAATCCTCGTCATCCTAGCGAGCTCCGGGACCCTTAGGCGGCACAGAGTACTCTGTGCGCGCTTCGA Ormosolenia_alpina TCGAATCCTGCAAATAG-CAGAATGACCCGCTAACTCGTAAACAATTTGGGCAAGCGTCGGGGGCCCTTGGTCCCCTGTCTGCGAATCCCTGGTAGGTGGCCACTCCCGGGTGGCCACCGGCCTGCAAAA-TCATTCGGGCGCGGAATGCGCCAAGGACCTT-AAAACTGAATTGTACGTCCGTATCCCGTTAGCGGGAAACGGCGTCGTTCCAAAA-CACAACGACTCTCGACAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCACTAGGCCGAGGGCACGTCTGCCTGGGTGTCGCGCATCGTCTTGCCC-GCAAACCACTCACTCCTGCGAAGTTGTGCTGGTTTGGGGGCGGAAACTGGCCTCCCGTGCCTTGTCGTGCGGTTGGCGGAAAAGCGAGTCTCCGGCGACGGGCGTCGCGACATCGGTGGTTGTAAAAGGCCCTCTTGTCTTGTCGCGCGAATCCCCGTCGTCTTAGCGAGCTCCAGGACCCTTAGGCGGCACAG---ACTCTGTGCGCGCTTTGA Ormosolenia_pisidica TCGAATCCTGCAAATAG-CAGAATGACCCGCTAACTCGTAAACAATTTGGGCAAGCGTCGGGGGCCCTTGGTCCCCTGTCTGCGAATCCCTGGTAGGTGGCCACTCCCGGGTGGCCACTGGCCTGCAAAA-TCATTCGGGCGCGGAATGCGCCAAGGACCTT-AAAACTGAATTGTACGTCCGTATCCCGTTAGCGGGAAACGGCGTCGTTCCAAAA-CACAACGACTCTCGACAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCACTAGGCCGAGGGCACGTCTGCCTGGGTGTCGCGCATCGTCTTGCCC-GCAAACCACTCACTCCTGCGAAGTTGTGCTGGTTTGGGGGCGGAAACTGGCCTCCCGTGCCTTGTCGTGCGGTTGGCGGAAAAGCGAGTCTTCGGCGACGGGCGTCGCGACATCGGTGGTTGTAAAAGGCCCTCTTGTCTTGTCGCGCGAATCCCCGTCGTCTTAGCGAGCTCCAGGACCCTTAGGCGGCACAG---ACTCTGTGCGCGCTTCGA Peucedanum_nebrodense TCGAATCCTGCAAATAG-CAGAATGACCCGCTAACTCGTAAACAATTTGGGCAAGCGTTGGGGGGCCTCGGTCCCCTGTCTGCGAATCCCTGGTAGGTGGCCACTCCCGGGTGGCCACTGGCCTGCAAAA-TCATTCGGGCGCGGAATGCGCCAAGGACCTTAAAAACTGAATTGTACGTCCGTATCCCGTTAGCGGGAAACGGCGTCGTTCCAAAA-CACAACGACTCTCGACAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCACTAGGCCGAGGGCACGTCTGCCTGGGTGTCACGCATCGTCTTGCCC-GCAAACCACTCGCTCCTGCGAAGTTGTGCCGGTTTGGGGGCGGAAACTGGCCTCCCGTGCCTTGTCGTGCGGTTGGTGGAAAAGCGAGTCTCCGGCGACGGACGTCGCGACATCGGTGGTTGTAAAATGCCCTCTGGTATTGTCGCGCGAATCCTCGTCATCTTAGCGAGCTCCGGGACCCTTAGGCGGCACAGAGTACTCTGTGCGCGCTTCGA ; END; BEGIN SETS; CHARSET ITS (CHARACTERS = Siculosciadium_DNA) = 1-611; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M13485] TITLE Siculosciadium_Morph; LINK TAXA = Taxa1; DIMENSIONS NCHAR=17; FORMAT DATATYPE=Standard SYMBOLS= "0 1 2 3 A C G T" MISSING=? GAP= -; MATRIX Aethusa_cynapium 01213102001301110 Dichoropetalum_achaicum 10003102012111120 Dichoropetalum_aromaticum 00110111011300001 Dichoropetalum_carvifolia 10103100001111120 Dichoropetalum_golestanicum 00100111012110100 Dichoropetalum_paucijugum 00010101010300001 Dichoropetalum_pschawicum 10103100001111120 Dichoropetalum_schottii 10103100001111120 Dichoropetalum_scoparium 10200110012111100 Dichoropetalum_seseloides 00100100012111111 Ormosolenia_alpina 11011002101011120 Ormosolenia_pisidica 11011002111111120 Peucedanum_nebrodense 11012002001211110 ; END; BEGIN SETS; CHARSET Morph (CHARACTERS = Siculosciadium_Morph) = 1-17; END; BEGIN TREES; TITLE Siculosciadium_result; LINK TAXA = Taxa1; TRANSLATE 1 Aethusa_cynapium, 2 Dichoropetalum_carvifolia, 3 Dichoropetalum_pschawicum, 4 Dichoropetalum_schottii, 5 Dichoropetalum_aromaticum, 6 Dichoropetalum_golestanicum, 7 Dichoropetalum_paucijugum, 8 Dichoropetalum_scoparium, 9 Dichoropetalum_seseloides, 10 Dichoropetalum_achaicum, 11 Peucedanum_nebrodense, 12 Ormosolenia_alpina, 13 Ormosolenia_pisidica; TREE Strict = [&R] (1,((((2,3),4,(((5,7),6),8,9),10),11),(12,13))); END;