#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 19, 2024; 14:20 GMT TreeBASE (cc) 1994-2008 Study reference: Ihlen P., & Ekman S. 2002. Outline of phylogeny and character evolution in Rhizocarpon (Rhizocarpaceae, lichenized Ascomycota) based on nuclear ITS and mitochondrial SSU ribosomal DNA sequences. Biological Journal of the Linnean Society, 77(4): 535-546. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S1320] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=17; TAXLABELS Catolechia_wahlenbergii_AF250792 Fuscidea_intercincta Poeltinula_cerebrina Rhizocarpon_amphibium Rhizocarpon_copelandii Rhizocarpon_distinctum Rhizocarpon_geminatum Rhizocarpon_geographicum Rhizocarpon_geographicum_AF250805 Rhizocarpon_hochstetteri Rhizocarpon_lavatum Rhizocarpon_norvegicum Rhizocarpon_oederi Rhizocarpon_petraeum Rhizocarpon_polycarpum Rhizocarpon_reductum Rhizocarpon_suomiense ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M309] TITLE nuITS_&_mtSSU_rDNA; LINK TAXA = Taxa1; DIMENSIONS NCHAR=1507; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=X GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Catolechia_wahlenbergii_AF250792 TTGAGAC-GGG-GACCC--TGTGCCCCGA-ACCTCCCATCTCT-GTCTACC-ACCTT--TTGTTGCTTCGGCGGG-GCCGTGC---CTGGGTCCTCCTGCCCCCCTTGAGCTT--GGGGAGTGTCCGCCGAAAGCCCTC--CA---CAATCCGACCTAT-CAG-TGACGTCTGAGCCAC-CGATTCAA-AAA--CTAAAAACTTTCAACAACGGATCTCTTGG-TCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCAAATCTTTGAACGCACATTGCGCCCTTTGGCACTCCAAAGGGCATGCCTGTCCGAGCGTCATCAAATCCCCCTCAAGCGT------CGCTTGGTGTTGGAC-CTC--CACTCCC---G--GGTG-GG-TCCCAAAAGCAGTGGCCATCACA-GTCCGAATC-CAAGCGCAGTAGTCTT----CCCGCTTTGGAG-GCTTCGGC-CTG--GATGC--GCCAGACAATCAGCTATCCATTTTTCCA--AAGGAATATTGGTCAATAGCCTAACGGCTGAACCAGCAACTTGGAAGAATGAATGGCAATAGCCAGTTACATTA-------GAAC--------------TTTT---T----TTTTGTGAAATCGACTCTGTCGAATAAAGTTCTGGGTGGAGTATTGATAATGACAATCTCTATCTGTGTGTCTTGACCAA-ATTACGTGCCAGCAGTCGCGGTAATAC-GTAAAAGACTAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACTTAGACGGTAAATCAAGCCAAGACAGAAACGGTACTAATTTACTT-GAGTATTATGTGAGGCGC---ATAAGGTT-GTATTCTTGAGAGAAGAGATGAAATTCTATCATCCG---TTGAGGTTACGGGTAAAGGCGAAAGCGACCATCTATGTAAATACTGACGTTGAAGGACGAAGGCCTACGGTCATTAACAGGATTAGATACCCAAGTATTCGTGGCAGACAATGATGAATGTCATAGACTAGAGATA-A--------------------------ATTTTAGTCTATAAATGAAAGTGTAAGCATTCCACCTCAAGAGTAATTTGGCAACATTGGAACTGAAATCATTAGACCGTTTCTGAAACCAGTAGTGAAGTATGTTATTTAATTTGATGATCCGCAAAAAACCTTACCACAATTTGTATATATAGATAATTTT--------TACAAGCGTTGCACGGCTGTCTTCAGTTAATGTCGTGAGATTTTGGTTAGTTCCATTAAATTAACGTAAACCCTTACTTTGTTTTTATATAAAGTAGTTCCCCCACACAATGGAATTGAAAATAGGGACTAAGATAAGTCATCATGGCCTAAATATTGTGGGCTATAGACGTGCCACCAAAGCCTTA-CAAAGGGATGCAAAATTGTGAAATTGAGCTAATCCTCCAAAATAGGTTTAACATGGATTGTAGTCTX Fuscidea_intercincta AAGAGAT-AGG-GCCGT--AG-TGCCTGA-ACCTCCCACCCTTTGCTGACC-ACCTT--TGCTTGCTTTGGCGGG-CCGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAATCCAT-CAT-CTG-TGAAGTCTGATTXXXXXXXXXXXXXXXXXXTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCACTCCAGGGGGCATGCCTGTTCGAGCGTCATXXXXXXCCCTTCAAGCCCAATC--GGTTTGGTATTGGGCXXXXXXXXXXXXXXXXXXXXXXXXAG-CCCTAAAAGCAATGGCXXXXXXXXGCCCGGCTT-CAAGCGTAGXXXXXXXXXXXXXCGCTTTGGAAXXXXXXXXXXXXXXXAGCTT--GCCGGTCAACA---AAAT---TTTTGCAA-CXXXXXXXXXXXXXXXTAGCCTAACGGCTGAACCAGCAACTTGGAAGAATGTATAGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCGACTATGTCGACTAAAATTCTGGGTGGAGTAATGATAATGACATTCTCTXXXXXXXXGTCTTGACCAA-ATCACGTGCCAGCAGTCGCGGCAAGAC-GTGGAAGACTAGCGTTATTCATCTTTAATAGGTTTAAAGGGTACCTAGACGGTAGATCTAGCCXXXXXXXXXXXGGTACXXXXXXXXXXXGAGTTTGATGGGAGAXXXXXXXXXXXXXTGGTACTXXXXAGAGGAGAGATGAAATTCTTTGATXXXXXXXXXXXGAAACAGGTATAGGCGAAGGCAACCCTTTATGTAAAAACTGACGTTGAAGGACGAAGGCCXXXGGTCACCAAAAGGATTAGATACCCCAGXXXXXXXGGCAGACAATGATGAATGTCATAGATTAGAXXXXX---------------------------ATTT-ATTCTATAAATGAAAGTGTAAGCATTCCACCTCAAGAGTAATTTGGCAACATTGAAACTGAAATCATTAGACCGTTTCTGAAACCAGTAGTGAAGTATGTTGTTTAATTAGATGTTACGCAAAAAACCTTACCACAATTTGAATATXXXXXXXXXXXXXXXXXXXXTACAAGCGTTGCACGGCTGTCTTCAGTTGATGTCGTGAGATTTTGGTTAGTTCCATTAAATTAACGTAAACCCTTACTTTATTTATTTATAAAGTAGTTCACCGATATATTGGACATGATAACAGGGATCAAGACAAGTCACCATGACCTGAATATTGTGGGCTATAGACGTGCCXXXXXXXXXXXXXCAAAAGGATGCAAAATTGCGAAATTTAGCTAATCCCCTAAAATAGGXXXXXXXXXXXXXXXXXXXXX Poeltinula_cerebrina TTGAGACCAGG-GAGCT--TA-TCCCTGA-ACTTCCAACCCGT-GTTTACC-AACTA--CCGTTGCTTTGATGGG-CCTGTGC---CCGGGGCTGTCCCCCGGTACCTCCATGC-GGGGAGTGCCTGTCAAAAGCCTTAACCT---ACATTCATC-TAC-CAG-TGAAGTCTGAATGAGCCGAA-CAA-TAAA-CAAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGCACTCCAAGGGGCATGCCTGTCCGAGCGTTATTAAC--CTCTTCAAGCCTCCA---GGCTTGGTGTTGGGC-CTC--CACCCTT--TG--GGTG-GG-CCCCAAAAGTATTGGCAGTT-CA-GTCCAACTT-TGAGCGTAGTAGTTCT----GCCGCTTTGCAA-GCTTGGGC-GCG--GCCTC--GCCAGATTAAC---TCTCCA-TCTACCAA-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCAACTTGGAAGAATGAAAGGCAATAGCCAGTTACAATA-------GAA---------------TTTT---T----TATTGTGAAATCGCCTCTGGCGAATAAAGTTCAGGGTAGAGTATTGATAATGACATTTTCTATCTGTTTGTCTTGACCAA-ATTACGTGCCAGCAGTCGCGGTAATAC-GTAAAAGACTAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACTTAGACGGTAAATCAAGCAAAAAAAAAAAATGAACTAATTTACTT-GAGTATGATGTGAGATGCGGAAGCTTGTTAGTATTCTTGAGAGAAGAGATGAAATTCTGTCATCCG---TCGAGGAAACGGGTAAAGGCGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX Rhizocarpon_amphibium CCGAGAT-AGG-GGCCCC-CG-GCCCCGA-ACCTCCCACCCGT-GCCAACA-AACCC--TCGTTGCTTTGGCGGG-CCCGTAC---GCAGGCTGGTCCGGTACCCCTGCTCACCCGGGGTGCGCCCGCCGACGGCCCAT--CG---AAATTCTTT-CCG-CGG-TGACGTCTGAGTAGCACGCAGCAA-CAAGTTAAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGCACTCCGAAGGGCATGCCTGTTCGAGCGTCATTAAA--CCCCTCAAGCGC------CGCTTGGTATTGGGC-CTCG-CCCCCGC---G--GGCG-GT-CCCCAAAGTCATTGGCAGCCXXXXACCGGACTC-CAGGCGTAGTAGTTTT----CCCGCCTCGGGA-GCTGCGGT-CGG--GGCCG--GCCAGACAAAA---CACCGC-TTTTTCC--AXXXXXXXXXXXXXXXXXGCCTAACGGCTGAACCAGCAACTTGGATGAATGAATGGCAATAGCCACTTACATAA-------AAAAA-------------ATTT---T----TTATGTGAAATCGACTCTGTCGAATAAAATTCTAGGTGGAATCTTGATAATGACATTTTCTATCTATTTGTCTTGACCAA-ATTACGTGCCAGCAGTCGCGGTAATAC-GTAAAAGACTAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACTTAGACGGTAAGTCAAGCCAAGGCAGAAAAGGTACTAATTTACTT-GAGTATAATGTGAGATGAGGAGGTTTGTTGGTATTCTTGAGAGAAGAGATGAAATTCTGTCATCCG---TTGAGGACACAGGTAAAGGCGAAAGCAACCATCTATGTAAATACTGACGTTGAAGGACGAAGGCCTACGGTAATTAACAGGATTAGATACCCAAGTATTCGTGGCAGACAATGATGAATGTCATAGACTAGAGCTAAA--------------------------ATTT-AGTCTATAAATGAAAGTGTAAGCATTCCACCTCAAGAGTAATTTGGCAACATTGGAACTGAAATCATTAGACCGTTTCTGAAACCAGTAGTGAAGTATGTTATTTAATTTGATGATCCGCAAAAAACCTTACCACAATTTGTATATTTATATAATATT--------TACAAGCGTTGCACGGCTGTCTTCAGTTAATGTCGTGAGATTTTGGTTAGTTCCATTAAATTAACGTAAACCCTTACTTTATTTTTATATAAAGTAGTTCACCGCTATATTGGATTTGACAAAAGGGACTAAGATAAGTCATCATGGCCTAAATATTGTGGGCTATAGACGTGCCACCAGAGCCTCA-CAAAGGGATGCAAAATTGCGAAATTGAGCTAATCCTCCAAAATAGGTTTAACATGGATTGTAGTCTG Rhizocarpon_copelandii CCGAGAC-AGGGGGCTC--CG-GCCCCCG-AGGTCCCACCCGT-GTTTACC-AACCT-TCCGTTGCTTTGGCGGG-CCTGTGC---CTGGGCTGGTCCCGGCGCTTCCGG-TACCGCTGAGTGCCCGCCGAAAGCCCAT--CC---AAACCCGTTTTAC-CGG-TGACGTCTGAGTTAA-CAAC-CAA-TAA--TTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGCACTCCAAGGGGCATGCCTGTTCGAGCGTCATTAAC--CCCTTCAAGCTCCC----GGCTTGGTGTTGGGC-CCT--CACCCCC---G--GGTG-GG-CCCCAAAGTCATTGGCAGTC-CG-GTCCGACTT-CAAGCGCAGTAGTTTT----CCCGCTTTGGAA-GTCTCGGGTCTG--GGCCTCCGCCAGATAACC---ATC----CGCCTTA--CXXXAATATTGGTCAATAGCCTAACGGCTGAACCAGCAACTTGGAAGAATGTATGGCAATAGCCACTTACATTA-------AAACAA------------ATTT---T----TAGTGTAAAATCGACTCTGTTGAATAAAGTTCTGGATGGAATATTGATAATGACATTTTCTGTCTATTTGTCTTGACCAA-ATTACGTGCCAGCAGTCGCGGTAATAC-GTAAAAGACTAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACTTAGACGGTAAATCAAGCCAAGAAAGAAAAGGTACTAATTTACTT-GAGTATTATGTGAGATGT-ATATATAGTT-GTATTCTTGAGAGAAGAGATGAAATTCTGTCATCCG---TTGAGGTTACGGGTAAAAGCGAAAGCGACCATCTATGTAAATACTGACGTTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX Rhizocarpon_distinctum CCGAGAA-AGG-GGGTTGACG-CCCCCGA-ACCTCCAACCCGT-GTTTACC-GACCTCTCTGTTGCTTTGGTGGG-CCTGTGC---CCCGGGCCATTCG-----CTCGC--GCATCAGGAAAACCCACCGAAAGCCCCTC-CA---AAACCCATT-TAC-CGG-TGAAGTCTGAGGAAC-ATAA-CAA-TAA--TCAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAAGGGGCATGCCTGTTCGAGCGTCATCAAA--CCCCTCGAGCCTACTTT-GGCTTGGTCTTGGGC-CCCG-CACCTCT---G--GGTG-GG-CCTCAAAGTCATCGGCAGGA-CA-GTCCGGCTT-CAAGCGTAGTAGTTTT----CCCGCTTTGGAG-GTCCGCGT-CTG--GCTCT--GCGAGTCAACC---ACAAC---CTTCTA--AXXXXXXXXXXXXXXXTAGCCTAACGGCTGAACCAGCAACTTGGAAGAACGAATGGCAATAGCCAATTACATTAAATTTAAAAACAAATCTTTTTTTTTTTTTTAATCGATTTTTGTGAAATCGACTCTGTCGAATAAAGTTCTGGATGGAATAATGATAATGACATTTTCTGTTTATGTGTCTTGACCAA-ATTACGTGCCAGCAGTCGCGGTAATAC-GTAAAAGACTAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACCTAGACGGTAAGTCAAGCCAAGATATAAAAGGTACTAATTTACTT-GAGTATTATGTGAGATGA-ATATATAGTT-GTATTCTTCAGAGAAGAGATGAAATTCTGTCATCCG---TTGAGGTTACGGGTAAAAGCGAAAGCGACCATCTATGTXXXXXXXXXXXXXXXAGGACGAAGGCCTACGGTAATTAACAGGATTAGATACCCAAGTATTCGTGGCAGACAATGATGAATGTCATAGACTAGAGATAAA--------------------------ATTT-AGTCTATAAATGAAAGTGTAAGCATTCCACCTCAAGAGTAATTTGGCAACATTGGAACTGAAATCATTAGACCGTTTCTGAAACCAGTAGTGAAGTATGTTATTTAATTTGATGATCCGCAAAAAACCTTACCACAATTTGTATATTTAGATAATATT--------TACAAGCGTTGCACGGCTGTCTTCAGTTAATGTCGTGAGATTTTGGTTAGCTCCATTAAATTAACGTAAACCCTTACTTTATTTTTATATAAAGTAGTTTCCCGCTATATTGGATATGACAATAGGGACTAAGACAAGTCATCATGGCCTGAATATTGTGGGCTATAGACGTGCCACCATAACCTTA-CAAAGGGATGCAAAATTGCGAAATTGAGCTAATCCTCCAAAATAGGTTTTACATGGATTGTAGTCTX Rhizocarpon_geminatum CCGAGAT-AGG-GGCTC--CG-GCCCCGA-ACCTCCAACCCCT-GTCTACC-CACAT--TTGTTGCTTTGGCGGG-CCCGTGC---CTGGGCTGGTCCCGGCACCTCCGCCCCC-GGGGTGTGCCCGCCGAAGGCCCTTT-CA---AAATTCGTT-TAC-CGG-TGCAGTCTGAGGAA--ATAATCAA-TAA--TTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTACTCCAAGGGGCATGCCTGTCCGAGCGTCATTAAA--CCCCTCAAGCTTCTCCG-GGCTTGGTCTTGGGC-CTTC-CACCCCC--CG--GGTG-GG-CCCCAAAGTCATTGGCAGTC-CT-GTCCGGCTT-CAAGCGTAGTAGTTCT----CCCGCTTTGGAA-GCCCCGGG-CCG--GGCCC--GCCAGATAATC---ACC----CCTTCCA--CXXGAATATTGGTCAATAGCCTAACGGCTGAACCAGCAACTTGGAAGAATGAATGGCAATAGCCAGTTACATTAC------AAAAAA------------AATT---G----TAGTGTGAAATTGACTCTGTCGAATAAAGTTCTGGGTGGAATATTGATAATGACATATTCTGTCTATTTGTCTTGACCAA-ATTACGTGCCAGCAGTCGCGGTAATAC-GTAAAAGACTAGTGTTATTCATCTTTAATTGGTTTAAAGGGTACTTAGACGGTAAATCAAGCCAAGATAGAAAAGGTACTAATTTACTT-GAGTATTATGTGAGATGC-ATATATAGTT-GTATTCTTGAGAGAAGAGATGAAATTCTGTCATCCG---TCGAGGTTACGGGTAAAAGCGAAAGCGACCATCTATGTAAATACTGACGTTGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX Rhizocarpon_geographicum TTGAGAT-AGG-GGCTC--CGGGCCCTGA-ACCTCCCACCCGT-GTTTACC-GATCT-TTTGTTGCTTTGGCGGG-CTTGCGG---CCGGGCTGG-ACC-----CCGGC--CGCCGCTGCGTGCCCGCCGAAAGCCCCC--CC---AAACTCGCG-TAC-CGG-TGACGTCTGAGTAAG-AGAA-CAA-TAA--TCAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGCACTCCAAGGGGCATACCTGTTCGAGCGTCATTAAA--CCCCTCAAGCCTTCCCCTGGCTTGGTCTTGGGCTCTGT-CACCCCC---G--GGTG-AG-CCTTAAACTGATTGGCAGTT-CA-GTCCGACTT-CGAGCGTAGTAGTTTT----CCCGCTCTGGGA-GCATCGGT-CTG--GTCCC--GCCAAACAACC---ATCA---TCTTACA--TXXGAATATTGGTCAATAGCCTAACGGCTGAACCAGCAACTTGGAAGAATGAATGGCAATAGCCAGTTACATTA-------AAACAA------------ATCT---T----TAGTGTGAAATCGACTCTGTCGAATAAAGTTCTGGATGGAATATTGATAATGACATTTTCTGTTTATTTGTCTTGACCAA-ATTACGTGCCAGCAGTCGCGGTAATAC-GTAAAAGACTAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACTTAGACGGTAAATCAAGCCAAGATAGAAAAGGTACTAATTTACTT-GAGTATAATGTGAGGTGA-ATATATGGCA-GTATTCTTGAGAGAAGAGATGAAATTCTGTCATCCG---TTGAGGTTACGGGTAAAAGCGAAAGCGACCATCTATGTAAATACTGACGTTXAAGGACGAAGGCCTACGGTAATTAACAGGATTAGATACCCAAGTATTCGTGGCAGACAATGATGAATGTCATAGACTAGAGGTAAA--------------------------ATTT-AGTCTATAAATGAAAGTGTAAGCATTCCACCTCAAGAGTAATTTGGCAACATTGGAACTGAAATCATTAGACCGTTTCTGAAACCAGTAGTGAAGTATGTTATTTAATTTGATGATCCGCAAAAAACCTTACCACAATTTGTATATTTAGATAATATT--------TACAAGCGTTGCACGGCTGTCTTCAGTTAATGTCGTGAGATTTTGGTTAGTTCCATTAAATTAACGTAAACCCTTACTTTATTTTTATATAAAGTAGTTTCCCGCTATATTGGATATGACAATAGGGACTAAGATAAGTCATCATGGCCTGAATATTGTGGGCTATAGACGTGCCACCAGAGCCTTA-CAAAGGGATGCAAAATTGCGAAATTGAGCTAATCCTCCAAAATAGGTTTGATATGGATTGTAGTCTG Rhizocarpon_geographicum_AF250805 CCGAGACGAGG-GGCTCC-CG-GCCCCGA-ACCTCCCACCCGT-ACTTACC-GACCT-TTTGTTGCTTTGGCGGG-CTTGCGT---CCGGGCTGGAAGC-----CCGGC--CGCCGCTGCGTGCCCGCCGAAAGCCCCC--CC---AAACTCATT-TAC-CGGTTAACGTCTGAGTGAC-CAAT-CAA-TAA--TCAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGCACTCCAAGGGGCATGCCTGTTCGAGCGTCATTAAA--CCCCTCAGGCCTATTTG-GGCTTGGTCTTGGGTCTTTT-CACCCCC---G--GGTG-GG-CCTCAAAGTTATTGGCAGCG-CA-GTCCGACTT-CGAGCGTAGTAGTTTT----CCCGCTCTGGGA-GCATCGGC-CTG--GCCTC--GCCAGACAACC---GCCA---TCTTGCC--TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX Rhizocarpon_hochstetteri ACGAGATAAGG-GGCTG--CG-GCCCCGA-ACCTCCAACCCGT-GTGTACC-TACCA--ATGTTGCTTTGACGCG-CCCG-GT---CTCGGACCGCCCGGG-GGCTCCCCTTC--GGGACGCGCGCGTCAATAGCCCAGC-CC---AGAATCGTT-TGC-CGG-TGAAGTCTGAGTGGT-CGAT-CAAATCA--GTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATATTGCGCCCCTTGGCACTCCAAGGGGCATGCCTGTCCGAGCGTCATTAAA--CCCCTCAAGCCCC-----GGCTTGGTGTTGGGC-CTTC-GCCTTCC--CC--GGTG-TG-CCCCAAAGACATTGGCAGTC-CA-GTCAGACCC-CAGGCGTAGTAGTTTT----CCGGCCTTCGAA-GCTCTGAC-CCG-AGACCC--GCCAGACAACC----CC-C--TCCACCCC-AAGGAATATTGGTCAATAGCCTGACGGCTGAACCAGCAACTTGGAAGAATGAATGGCAATAGCCAGTTACATTA-------GAA---------------TTTT---T----TTTTGTGAAATCGCCTCTGGCGAATAAAGTTCTGGGTGGAGTATTGATAATGACATTCTCTATCTGTTTGTCTTGACCAA-ATTACGTGCCAGCAGTCGCGGTAATACAGTAAAAGACTAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACTTAGACGGTAAATAAAGCCAATAAACAAAAGGAACTAATTTACTT-GAGTATGATGTGAGATGCGGAGGCTTGTTAGTATTCTTGAGAGTAGAGATGAAATTCTGTCATCCG---TTGAGGACACGGGTAAAGGCGAAAGCGACCATTTATGTAAATACTGACGTTGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX Rhizocarpon_lavatum CCGAGAT-AGG-GGCTC--CG-GCCCCGA-ACCTCCCACCCGT-GTTTACC-GACCC--TTGTTGCTTTGGCGGG-TCCGTGCCGACCGGGACCGATCGGT-ACCCCCTT-AACCGGGGAGCGCCCGCCGAAAGCCTGTCCGGTACAAATTCTTCXXXXXCGG-TGGAGTCTGAGTGAA-CATAGCAA-TAA--TCAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTACTCCAAGGGGCATGCCTGTCCGAGCGTCATTACA--CCC-TCAAGCCCT-----TGCTTGGTATTGGGC-CGA--CACTCCC-TTGGGGGTG-GG-TCCGAAAGTCATTGGCCGTC-CGCATCGGACTT-CAGGCGTAGTGGCTTT----CCCGCCTTGGAA-GCGCCGGC-CCG--GGCCT--GCCAGACAACA---TCCACA-TTCTTTC--GAGGAATATTGGTCAATAGCCTAACGGCTGAACCAGCAACTTGGAGGAATGTATGGCAATAGCCACTTACATAA-------AAAAA-------------ATTT---T----TTATGTGAAATCGACTCTGTCGAATAAAATTCTGGGTGGAATTTTGATAATGACATTTTCTATCTATTTGTCTTGACCAA-ATTACGTGCCAGCAGTCGCGGTAATAC-GTAAAAGACTAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACTTAGACGGTAAGTCAAGCCAAGGCAGAAAAGGTACTAATTTACTT-GAGTATAATGTGAGATGAGGAGGTTTGTTGGTATTCTTGAGAGAAGAGATGAAATTCTGTCATCCG---TTGAGGACACAGGTAAAGGCGAAAGCGACCATCTATGTAAATACTGACGTTGAAGGACGAAGGCCTACGGTAATTAACAGGATTAGATACCCAAGTATTCGTGGCAGACAATGATGAATGTCATAGACTAGAGCTAAA--------------------------ATTT-AGTCTATAAATGAAAGTGTAAGCATTCCACCTCAAGAGTAATTTGGCAACATTGGAACTGAAATCATTAGACCGTTTCTGAAACCAGTAGTGAAGTATGTTATTTAATTTGATGATCCGCAAAAAACCTTACCACAATTTGTATATTTATATAATATT--------TACAAGCGTTGCACGGCTGTCTTCAGTTAATGTCGTGAGATTTTGGTTAGTTCCATTAAATTAACGTAAACCCTTACTTTATTTTTATATAAAGTAGTTCACCGCTATATTGGATTTGACAATAGGGACTAAGATAAGTCATCATGGCCTAAATATTGTGGGCTATAGACGTGCCACCAAAGCCTTA-CAAAGGGATGCAAAATTGTGAAATTAAGCTAATCCCCCAAAATTGGTTTAACATGGATTGTAGTCTX Rhizocarpon_norvegicum TCGAGAA-AGGGGGCTC--CG-GCCCCCAGACCTCCCACCCGT-GTCTACT-GACCC-TCTGTTGCTTTGGCGGG-CCCGCGT---CCGGGCTGGT-C------CCGGC--GCCTTTTGACAGCCCGTCATAAGCCCAC--CT---GAACTCGTT-TAC-CGG-TAATGTCTGAGTAAC-AAAA-CAA-CAAA-CTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTACTCCAAGGGGCATGCCTGTTCGAGCGTCATTAAA--CCCCTCAAGCCCCTCCTTGGCTTGGTTTTGGGCCCTTT-CACCCCC---G--GGTG-GG-CCCCAAAGTCATTGGCAGAG-CA-GCCCGACTT-CAAGCGTAGTGGTTTT----CCCGCTTTGGAA-GCGTCGGC-CTGTGGTCCT--GCCAGATAACC---ACCCCC-TTATACA--TAGGAATATTGGTCAATAGCCTAACGGCTGAACCAGCAACTTGGAAGAATGAATGGCAATAGCCAGTTACATTA-------AAACAA------------ATCT---T----TAGTGTGAAATCGACTCTGTCGAATAAAGTTCTGGATGGAATATTGATAATGACATTTTCTGTTTATTTGTCTTGACCAA-ATTACGTGCCAGCAGTCGCGGTAATAC-GTAAAAGACTAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACTTAGACGGTAAATCAAGCCAAGATAGAAAAGGTACTAATTTACTT-GAGTATTATGTGAGATGT-ATATATAGTT-GTATTCTTGAGAGAAGAGATGAAATTCTGTCATCCG---TTGAGGTTACGGGTAAAAGCGAAAGCGACCATCTATGTAAATACTGACGTTGAAGGACGAAGGCCTACGGTAATTAACAGGATTAGATACCCAAGTATTCGTGGCAGACAATGATGAATGTCATAGACTAGAGGTAAA--------------------------ATTT-AGTCTATAAATGAAAGTGTAAGCATTCCACCTCAAGAGTAATTTGGCAACATTGGAACTGAAATCATTAGACCGTTTCTGAAACCAGTAGTGAAGTATGTTATTTAATTTGATGATCCGCAAAAAACCTTACCACAATTTGTATATTTAGATAATATT--------TACAAGCGTTGCACGGCTGTCTTCAGTTAATGTCGTGAGATTTTGGTTAGTTCCATTAAATTAACGTAAACCCTTACTTTATTTTTATATAAAGTAGTTCCCCGCTATATTGGATATGACAACAGGGACTAAGATAAGTCATCATGGCCTGAATATTGTGGGCTATAGACGTGCCACCAGAGCCTCA-CAAAGGGATGCAAAATTGCGAAATTGAGCTAATCCTCCAAAATAGGTTTGACATGGATTGTAGTCTX Rhizocarpon_oederi CCGAGCA-AGG-GGCTT--CA-GCCCCG--ACCTCCCACCCGT-GTTTACCTGACC---GCGTTGCTTTGGCGGGXXXXXXXX---CCCGGACC-ATC-----------------CAGG--GACCTGCCAAGGGCCCAC--AC---AAACTCGTT-CAT-CGG-CGACGTCTGAGTGAG-ATA--CAA-TCG--TGAAAA-CTTTCAACAACGGATCTCTTGGCTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCCGGCACCCCGGAGGGCATGCCTGTCCGAGCGTCATTAAA--CCCCTCGAGCTC------CGCTCGGTGCTGGGT-CGTC-CACCCCC---G--GGTG-GGACCCCAAAGTCAGCGGCGGTC-GG-GTCCGACTT-CAAGCGTAGTGGCACC----GCCGCTTTGGAA-GCCTCGGG-CCC--GATCT--GCCGGA--ACC---ATCTA-----ACCC---AGGAATATTGGTCAATAGCCTAACGGCTGAACCAGCAACTTGGAAGAATGAATGGCAATAACCAATCACATTA-------AAAAGA------------TTTT---T----TAGTGTGAAATCGACTCTGTCGAATAAAATTCTGGGTGGAATATTGATAATGACATTTTCTATCTATTTGTCTTGACCAA-ATTACGTGCCAGCAGTCGCGGTAATAC-GTAAAAGACTAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACTTAGACGGTAAATCAAGCCAATATATAAAAGGTACTAGTTTACTTAGAGTTTTATGTGAGATGT-AAATACGGTT-GAATTCTTGAGAGAAGAGATGAAATTCAGTCATCCG---TCGAGGTTACGGGTAAAGGCGAAAGCGACCATCTATGTAAAAACTGACGTTGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX Rhizocarpon_petraeum TCGAGAT-AGG-GGCCA--AC-GCCCCGA-ACCTCCCACCCGT-GTCAACCTAACTC--TTGTTGCTTTGGCGGG-CC-GTG----GCCGGCTGGCCCAGCGC-CCCCG--ACGTGAGGTGCGCCCGCCGAAGGCCTCC--CC---ACACCTTTT-TAC-CGG-TGACGTCTGAGCGAA-AACA-CAA-AAAA-TTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGCATTCCAAGGGGCATGCCTGTTCGAGCGTCATTAAC--CCCCTCAAGCAC------CGCTTGGTGTTGGGC-TTC--CACCTCC--CGA-GGTGCGG-CCCCAAACGCATCGGCGGCC-CG-GTTCGACTT-CAGGCGTAGTAGTTTG----TCCGCCTCCGGA-GTGCTGCG-CCG--GGCCC--GCCCGACAACC---ACT-G--TCTTCCA--TAGGAATATTGGTCAATAGCCTAACGGCTGAACCAGCAACTTGGATGAATGAATGGCAATTGCCACTTACAAAA-------AAAAA-------------TTTT---T----TTTTGTGAAATCGACTCGGTCGAGTAAAGTTCTGGATGGAATATTGATAATGACATATTCTATCTATTTGTCTTGACAAAGATTTCGTGCCAGCAGTCGCGGTAATAC-GGAAAAGACTAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACTTAGACGGTAAGTCAAGCCAAGGTAGAAAAGGTACTAATTTACTT-GAGTATTATGTAAGATGTGGAAGATTGTTGGTATTCTTGAGAGAAGAGATGAAATTCTGTCATCCG---TTGAGGACACAGGTAAAGGCGAAAGCAACCATCTATGTAAATACTGACGTTGAAGGACGAAGGCCTACGGGAATTAACAGGATTAGATACCCAAGTATTCGTGGCAGACAACGATGAATGTCATAGGTTAGAGCTA-A---------------------------TTT-AGACTATAAATGAAAGTGTAAGCATTCCACCTCAAGAGTAATTTGGCAACATTGGAACTGAAATCATTAGACCGTTTCTGAAACCAGTAGTGAAGTATGTTATTTAATTTGATGATCCGCAAAAAACCTTACCACAATTTGTATATTTAGATATTATT--------TACAAGAGTTGCACGGCTGTCTTCAGTTAATGTCGTGAGATTTTGGTTAGTTCCATTAAATTAACGTAAACCCTTACTTTATTTTTATATAAAGTAGTACACCGCTATATTGGATTTGACAATAGGGACTAAGATAAGTCATCATGGCCTGAATATTGTGGGCTATAGACGTGCCACCAAAGCCTTA-CAAAGGGATGCGAAATTGAGAAATTAAGCTAATCCTCCAAAATTGGTTTAACTTGGATTGXXXXXXX Rhizocarpon_polycarpum CCGAGAT-GGG-GGGCCCATG-CCCCCGA-ACCTCCCACCCGT-GTCTACC-GACCTTTCTGTTGCTTTGGCGGG-CCTGCGT---CCGGG---------GCGCTTGCCTCGTCC------AGCCCGCCGAAAGCCCCT--CT---CAACTCGTT-TAC-CCG-TGACGTCTGAGGACC-AAAA-CAA-TAA--TCAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGCACTCCAAGGGGCATGCCTGTTCGAGCGTCATTAAA--CCCCTCAAGTCTTGCCT-GGCTTGGTCTTGGGC-CTCG-CACCTCC---G--GGTG-GG-CCTCAAAATCATTGGCAGCG-CA-GGCGGACTT-CAAGCGTAGTAGATTT----CCCGCTTTGGAA-GTTGCCGC-CTG--GGCCT--GCCAGTTAACC---ACCTA--TTTTGCATGTAGGAATATTGGTCAATAGCCTAACGGCTGAACCAGCAACTTGGAAGAATGAATGGCAATAGCCACTTACATTA-------AAAAAAGA----TTTTTTTTTTAAATCTA-TAGTGTGAAATCGACTTTGTCGAATAAAGTTCTGGATAGAATATTGATAATGACATTTTCTGTTTATTTGTCTTGACCAA-ATTACGTGCCAGCAGTCGCGGTAATAC-GTAAAAGACTAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACTTAGACGGTAAATCAAGCCAAGATAGAAAAGGTACTAATTTACTT-GAGTATTATGTGAGATGA-AAATATGGCA-GTATTCTTGAGAGAAGAGATGAAATTCTGTCATCCG---TTGAGGTTACGGGTAAAAGCGAAAGCGACCATCTATGTAAATACTGACGTTGAAGGACGAAGGCCTACGGTAATTAACAGGATTAGATACCCAAGTATTCGTGGCAGACAATGATGAATGTCATAGACTAGAGGTAAAATTAAGTTTATAAATATAGACTGAAAATTT-AGTCTATAAATGAAAGTGTAAGCATTCCACCTCAAGAGTAATTTGGCAACATTGGAACTGAAATCATTAGACCGTTTCTGAAACCAGTAGTGAAGTATGTTATTTAATTTGATGATCCGCAAAAAACCTTACCACAATTTGTATATTTAGATAATATT--------TACAAGCGTTGCACGGCTGTCTTCAGTTAATGTCGTGAGATTTTGGTTAGTTCCATTAAATTAACGTAAACCCTTACTTTATTTTTATATAAAGTAGTTTCCCGCTATATTGGATATGACAATAGGGACTAAGATAAGTCATCATGGCCTGAATATTGTGGGCTATAGACGTGCCACCAGAACCTCA-CAAAGGGATGCAAAATTGCGAAATTGAGCTAATCCTCCAAAATAGGTTTTACATGGATTGTAGTCTX Rhizocarpon_reductum TTGAGAT-AGG-GGCTC--CG-GCCCCGA-ACCTTC-ACCCGT-GCTTACC-CACCT--CTGTTGCTTTGGCGGG-CCTGTGC---GCAGGCTGTCCCGGCACCCCCCT--GAGCGGGGCGCGCCCGTCGAGAGCCCCATCAA---AAACCTTTT-TAT-CGG-TGACGTCTGAGCGAC-AACA-CAA-AAAA-CTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAAGGGGCATGCCTGTTCGAGCGTCATTAAC--CCCCTCAAGCAT------CGCTTGGTATTGGGC-ATC--CACCCTC-CCGT-GGTGGGG-CCCCAAACCCATCGGCGGCC-CA-GGTCGGCTC-CAGGCGTAGTAGTTTT----TCCGCCCCCGGA-GCGCGGCG-CTG--AGCTC--GCCCGACAACC---GCCAC---CTCTGA--AAGGAATATTGGTCAATAGCCTAACGGCTGAACCAGCAACTTGGATGAATGAATGGCATTAGCCACTTACAAAA-------AAAC--------------TTTT---T----TTTTGTGATATCGACTCTGTCGAGTAAAGTTCTGGGTGGAATATTGATAATGACATATTCTATCTATTTGTCTTGACCAA-ATTTCGTGCCAGCAGTCGCGGTAATAC-GTAAAAGACTAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACTTAGACGGTAAGTCAAGCCAAGGTAGAAAAGGTACTAATTTACTT-GAGTATTATGTGAGATGTGGAAGATTGTTGGTATTCTTGAGAGAAGAGATGAAATTCTGTCATCCG---TTGAGGACACAGGTAAAGGCGAAAGCAACCATCTATGTAAATACTGACGTTGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX Rhizocarpon_suomiense CCGAGAG-AGG-GGCTC--TG-GCCCCGA-ACCTCCAACCCGT-GTCTACC-AACCT--AAGTTGCTTTGGCGGG-CCGGT-C---CCGGG---------CACCTCCGG--TACTGCTGAGTGCCCGCCACAAGCCCATC-ACC--AAAACCGTT-TGC-CG--TGGTGTCTGAGTACC-AAC--CAA-TAA--CTAAAA-CTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCACTCCAAGGGGCATGCCTGTTCGAGCGTCATTAAA--CCCCTCAAGCTCCAGTC-GGCTTGGTCTTGGGC-TTT--CACCCCCCCCG--GATG-GG-CCCCAAAGTCATCGGCGGTC-CA-GTCTGACTTTCAAGCGTAGTAGTTTT----GCCGCTTTGGAAAGTATTGAT-CTG--GACCC--GCCGGATAACC---ACC----CGCCTTCTAGAGGAATATTGGTCAATAGCCTAACGGCTGAACCAGCAACTTGGAAGAATGAATGGCAATAGCCAGTTACATTA-------AAAAAA------------AATT---T----TAGTGTGAAATCGACTCTGTCGAATAAAGTTCTGGATGGAATATTGATAATGACATTTTCTGTCTATTTGTCTTGACCAA-ATTACGTGCCAGCAGTCGCGGTAATAC-GTAAAAGGCTAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACTTAGACGGTAAATCAAGCCAAGAAAGAAAAGGTACTAATTTACTT-GAGTATTATGTGAGATGA-ATATATAGTT-GTATTCTTGAGAGAAGAGATGAAATTCTGTGATCCG---TTGAGGTTACGGGTAAAAGCGAAAGCGACCATCTATGTAAATACTGACGTTGAXGGACGAAGGCCTACGGTAATTAACAGGATTAGATACCCAAGTATTCGTGGCAGACAATGATGAATGTCATAGACTAGAGATATA--------------------------TTTT-AGTCTATAAATGAAAGTGTAAGCATTCCACCTCAAGAGTAATTTGGCAACATTGGAACTGAAATCATTAGACCGTTTCTGAAACCAGTAGTGAAGTATGTTATTTAATTTGATGATCCGCAAAAAACCTTACCACAATTTGTATATTTAGATAATATT--------TACAAGCGTTGCACGGCTGTCTTCAGTTAATGTCGTGAGATTTTGGTTAGTTCCATTAAATTAACGTAAACCCTTACTTTATTTTTATATAAAGTAGTTCTCCGCTATATTGGATATGACAACAGGGACTAAGATAAGTCATCATGGCCTGAATATTGTGGGCTATAGACGTGCCACCAGAGCCTTA-CAAAGGGATGCAAAATTGTGAAATTGAGCTAATCCTCCAAAATAGGTTTAACATGGATTGTAGTCTX ; END; BEGIN TREES; TITLE Tb7239; LINK TAXA = Taxa1; TRANSLATE 1 Fuscidea_intercincta, 2 Poeltinula_cerebrina, 3 Rhizocarpon_hochstetteri, 4 Catolechia_wahlenbergii_AF250792, 5 Rhizocarpon_reductum, 6 Rhizocarpon_petraeum, 7 Rhizocarpon_lavatum, 8 Rhizocarpon_amphibium, 9 Rhizocarpon_oederi, 10 Rhizocarpon_suomiense, 11 Rhizocarpon_geminatum, 12 Rhizocarpon_distinctum, 13 Rhizocarpon_polycarpum, 14 Rhizocarpon_copelandii, 15 Rhizocarpon_norvegicum, 16 Rhizocarpon_geographicum, 17 Rhizocarpon_geographicum_AF250805; TREE Fig._1B = [&R] (1,(((2,3),(((5,6),(7,8)),(9,(((10,14),(((12,13),(16,17)),15)),11)))),4)Rhizocarpaceae); END;