#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 26, 2024; 14:15 GMT TreeBASE (cc) 1994-2008 Study reference: Vaillancourt R., & Weeden N. 1993. Chloroplast DNA phylogeny of Old World Vigna (Leguminosae). Systematic Botany, 18: 642-651. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S136] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=38; TAXLABELS Dipogon_lignosus Macroptilium_erythroloma Phaseolus_vulgaris Vigna_aconitifolia Vigna_adenantha Vigna_ambacensis Vigna_angularis Vigna_caracalla Vigna_friesiorum Vigna_frutescens Vigna_gazensis Vigna_glabrescens Vigna_kirkii Vigna_lobatifolia Vigna_longifolia Vigna_luteola_PI_292866 Vigna_luteola_PI_415634 Vigna_membranacea Vigna_monophylla Vigna_mungo Vigna_nangensis Vigna_nigrita Vigna_oblongifolia_RFM_001 Vigna_oblongifolia_RFM_601 Vigna_peduncularis Vigna_radiata Vigna_reticulata Vigna_schimperi Vigna_subterranea Vigna_trilobata Vigna_ung_dekindtiana_RFM_320 Vigna_ung_ung_PI_246131 Vigna_unguicalata__dek._RFM_218 Vigna_unguicalata_dek._RFM_025 Vigna_unguiculata_RFM_055 Vigna_unguiculata_dek._RFM_014 Vigna_unguiculata_dek._RFM_026 Vigna_vexillata ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M2189] TITLE Appendix_1; LINK TAXA = Taxa1; DIMENSIONS NCHAR=72; FORMAT DATATYPE=Standard SYMBOLS= "0 1" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 ] [ . . . . . . . ] Dipogon_lignosus 010111100001000010011010100111001111001011001000000010100100000000010010 Macroptilium_erythroloma 0?0?110?0001000010011011010111001111101000001100000010100100011000011000 Phaseolus_vulgaris 0011000?00010010100110110101110011?1?01001001100000010100100010100011010 Vigna_aconitifolia ???00???11101110101001101011100110000?????10????0100???01110??00000011?? Vigna_adenantha 000111000001000010011011010101001111101001101100000011000100010100011000 Vigna_ambacensis 110100010101000110010011100101111010010110000000000111111111110000001110 Vigna_angularis ??00001010??110010??00101011110110100?010010????1110???011100?000000?1?0 Vigna_caracalla 000111000001000010011011010111001011101001011100000011000100010100010000 Vigna_friesiorum 0100001001??0010000000011101110110100?01111?????00001110011111101000?1?1 Vigna_frutescens 000110000?0100001010?011010111111101101?000011000000111001??010001011000 Vigna_gazensis 110100000101000010010011100111010010010110000000000111100111111000001110 Vigna_glabrescens 010000101?10110010100110101111011000010110100000010011101110010000011110 Vigna_kirkii 010000100000000010010011100111011010010110000000000011100110011010001110 Vigna_lobatifolia 01000010000000101000001110011001001001010101001100001110111001100010110? Vigna_longifolia ????10??0???00??1010001101??1?1?1111100?0???11000000???0?????????1011?10 Vigna_luteola_PI_292866 110100010101000110010011100111011010000110100000000111111111010000001110 Vigna_luteola_PI_415634 11010001010100011000001110011101101000011010????000111111111110000001110 Vigna_membranacea 0100001001?00000000100011001110110100?011100????00001110011111100000?1?1 Vigna_monophylla 010000100001000010010011100011011010010100000000000011100110011010001110 Vigna_mungo ??00001011101010101001101011110110000?01?010????0100???0111001000000?1?0 Vigna_nangensis 010000100001001010010011100011011101110111000101100011100110011010011000 Vigna_nigrita 01?1001000010000110100111100110110?0?101000011000000111001??011010001010 Vigna_oblongifolia_RFM_001 110100010101000110000011100111011010000110100000000111111111110000001110 Vigna_oblongifolia_RFM_601 110100010101000110000011100111011010000110100000000111111111110000001110 Vigna_peduncularis 001111000001001010011011010111011011101000001100000011000100010??0011000 Vigna_radiata ??00001011101010101001101011110110000101?010????0100111011100100000011?0 Vigna_reticulata 01000010010000001100001110011000001001011000?????000111011110110000011?0 Vigna_schimperi 010000100001000010110011110111011010010100000000000011100110011010001110 Vigna_subterranea 110100110101000010010011100111011010010110000000000111111111110000001110 Vigna_trilobata 01??????1110111010100110101111011000010???10????0110111011100100000011?0 Vigna_ung_dekindtiana_RFM_320 010000000100001010000010100100010010010111000001100011101011001001001110 Vigna_ung_ung_PI_246131 010000000100001010000010100100010010010111000001100011101011101001001110 Vigna_unguicalata__dek._RFM_218 010000000100001010100010100100010010010111000001100001101011001001001110 Vigna_unguicalata_dek._RFM_025 010000000100001010000010100100010010010111000001????11101011001001001110 Vigna_unguiculata_RFM_055 010000000100001010000010100100010010010111000001100011101011001001001110 Vigna_unguiculata_dek._RFM_014 010000000100001010000010100100010010010111000001100011101011001001001110 Vigna_unguiculata_dek._RFM_026 010000000100001010000010100100010010010111000001100001101011001001001110 Vigna_vexillata 010000100000001010000011100110010010010101000011000011101111001000101100 ; END; BEGIN TREES; TITLE Tb4858; LINK TAXA = Taxa1; TRANSLATE 1 Dipogon_lignosus, 2 Macroptilium_erythroloma, 3 Phaseolus_vulgaris, 4 Vigna_monophylla, 5 Vigna_nangensis, 6 Vigna_schimperi, 7 Vigna_nigrita, 8 Vigna_longifolia, 9 Vigna_adenantha, 10 Vigna_caracalla, 11 Vigna_peduncularis, 12 Vigna_vexillata, 13 Vigna_kirkii, 14 Vigna_lobatifolia, 15 Vigna_angularis, 16 Vigna_glabrescens, 17 Vigna_mungo, 18 Vigna_radiata, 19 Vigna_trilobata, 20 Vigna_aconitifolia, 21 Vigna_ung_ung_PI_246131, 22 Vigna_ung_dekindtiana_RFM_320, 23 Vigna_unguiculata_RFM_055, 24 Vigna_unguiculata_dek._RFM_026, 25 Vigna_unguicalata_dek._RFM_025, 26 Vigna_unguicalata__dek._RFM_218, 27 Vigna_unguiculata_dek._RFM_014, 28 Vigna_luteola_PI_415634, 29 Vigna_luteola_PI_292866, 30 Vigna_oblongifolia_RFM_001, 31 Vigna_oblongifolia_RFM_601, 32 Vigna_subterranea, 33 Vigna_ambacensis, 34 Vigna_gazensis, 35 Vigna_membranacea, 36 Vigna_friesiorum, 37 Vigna_reticulata, 38 Vigna_frutescens; TREE Fig._3 = [&R] (2,3,1,(((13,(((((12,14),(21,22,(24,26))),37),(15,(16,((17,18),19,20)))),((((((28,30,31),29),33),32),34),(35,36)))),6,4),5,7),(8,38),9,10,11); TREE Fig._2 = [&R] (((2,38),((3,11),9,10)),1,(((4,(6,((((((12,14),(21,22,(24,26))),37),(15,(16,((17,18),19,20)))),((((((28,30,31),29),33),32),34),(35,36))),13))),7),5)); TREE Fig._1 = [&R] ((2,3,9,10,11,38),1,(((((13,(((((12,14),(21,22,(24,26))),37),(15,(16,((17,18),19,20)))),((((((28,30,31),29),33),32),34),(35,36)))),6),4),7),5)); END;