#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on March 28, 2024; 21:15 GMT TreeBASE (cc) 1994-2008 Study reference: Lin C. 2012. Development of molecular detection and field investigation for two citrus viroids in Taiwan. European Journal of Plant Pathology, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S13718] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=214; TAXLABELS 'Citrus Exocortis Viroid CEVdg-M' 'Citrus Exocortis Viroid CEVdg-S' Citrus_exocortis_viroid Citrus_exocortis_viroid_1 Citrus_exocortis_viroid_2 Citrus_exocortis_viroid_2b Citrus_exocortis_viroid_4 'Citrus exocortis viroid AD1_CEVd plus strand' 'Citrus exocortis viroid CEV-A' 'Citrus exocortis viroid CEV-DE30' 'Citrus exocortis viroid CEV-JA' 'Citrus exocortis viroid CEV-JB' 'Citrus exocortis viroid CEV-g' 'Citrus exocortis viroid CEVd-225' Citrus_exocortis_viroid_De25 Citrus_exocortis_viroid_E117_V1 Citrus_exocortis_viroid_E117_V2 Citrus_exocortis_viroid_E117_V3 Citrus_exocortis_viroid_E117_V4 Citrus_exocortis_viroid_E117_V5 Citrus_exocortis_viroid_E117_V6 Citrus_exocortis_viroid_E117_V7 Citrus_exocortis_viroid_E117_V8 Citrus_exocortis_viroid_E117_V9 Citrus_exocortis_viroid_L Citrus_exocortis_viroid_RNA_sequence Citrus_exocortis_viroid_Sj_1 Citrus_exocortis_viroid_Sj_2 'Citrus exocortis viroid Sj-LS' 'Citrus exocortis viroid clone A2-C-1' 'Citrus exocortis viroid clone A2-C-2' 'Citrus exocortis viroid clone A2-C-3' 'Citrus exocortis viroid clone A2-C-4' 'Citrus exocortis viroid clone A2-C-5' 'Citrus exocortis viroid clone A2-C-7' 'Citrus exocortis viroid clone A35-C-1' 'Citrus exocortis viroid clone A35-C-2' 'Citrus exocortis viroid clone A35-C-3' Citrus_exocortis_viroid_clone_CEVd2 Citrus_exocortis_viroid_clone_CEVd22 Citrus_exocortis_viroid_clone_GV4 Citrus_exocortis_viroid_from_Colombia 'Citrus exocortis viroid isolate 043-8uy' 'Citrus exocortis viroid isolate 054-10uy' 'Citrus exocortis viroid isolate 054-13uy' Citrus_exocortis_viroid_isolate_1 'Citrus exocortis viroid isolate 150-10uy' 'Citrus exocortis viroid isolate 150-4uy' 'Citrus exocortis viroid isolate 1863019-4' 'Citrus exocortis viroid isolate 205-E-1 Uy' 'Citrus exocortis viroid isolate 205-E-2 Uy' 'Citrus exocortis viroid isolate 205-E-5 Uy' 'Citrus exocortis viroid isolate 205-E-7 Uy' 'Citrus exocortis viroid isolate 206-2' 'Citrus exocortis viroid isolate 206-3uy' 'Citrus exocortis viroid isolate 206-4uy' Citrus_exocortis_viroid_isolate_3123575 Citrus_exocortis_viroid_isolate_3823889 'Citrus exocortis viroid isolate 454-FI-I' 'Citrus exocortis viroid isolate 54-E-1 Uy' 'Citrus exocortis viroid isolate 54-E-18 Uy' 'Citrus exocortis viroid isolate 54-E-3 Uy' Citrus_exocortis_viroid_isolate_89002594 Citrus_exocortis_viroid_isolate_89002600 Citrus_exocortis_viroid_isolate_8900808 'Citrus exocortis viroid isolate 9669-FI-I' 'Citrus exocortis viroid isolate 9670-FI-I' 'Citrus exocortis viroid isolate 9675-FI-I' Citrus_exocortis_viroid_isolate_AI1 Citrus_exocortis_viroid_isolate_AI3 Citrus_exocortis_viroid_isolate_BSE Citrus_exocortis_viroid_isolate_CEVd 'Citrus exocortis viroid isolate CEVd E-117' 'Citrus exocortis viroid isolate CEVd-Croatia' 'Citrus exocortis viroid isolate CEVd-DI 129' 'Citrus exocortis viroid isolate CEVd-DI 56' 'Citrus exocortis viroid isolate CEVd-HB' 'Citrus exocortis viroid isolate CEVd-Italy-BL China' 'Citrus exocortis viroid isolate CEVd-TV' 'Citrus exocortis viroid isolate CEVd-XNM-HJ Guangdong-YC' 'Citrus exocortis viroid isolate CEVd-XNM-XY Guangdong-YC' 'Citrus exocortis viroid isolate CEVd-XNM-YZ Guangdong-YC' 'Citrus exocortis viroid isolate CEVd-XNM-ZK Guangdong-YC' 'Citrus exocortis viroid isolate CEVd-ZGS-ZK China' 'Citrus exocortis viroid isolate CEVd-f-1' 'Citrus exocortis viroid isolate CEVd-f-2' 'Citrus exocortis viroid isolate CEVd-f-3' 'Citrus exocortis viroid isolate CEVd-f-4' 'Citrus exocortis viroid isolate CEVd-f-5' 'Citrus exocortis viroid isolate CEVd-f-6' 'Citrus exocortis viroid isolate CEVd-gb4' 'Citrus exocortis viroid isolate CEVd-i-1' 'Citrus exocortis viroid isolate CEVd-i-10' 'Citrus exocortis viroid isolate CEVd-i-11' 'Citrus exocortis viroid isolate CEVd-i-12' 'Citrus exocortis viroid isolate CEVd-i-13' 'Citrus exocortis viroid isolate CEVd-i-14' 'Citrus exocortis viroid isolate CEVd-i-15' 'Citrus exocortis viroid isolate CEVd-i-16' 'Citrus exocortis viroid isolate CEVd-i-17' 'Citrus exocortis viroid isolate CEVd-i-18' 'Citrus exocortis viroid isolate CEVd-i-19' 'Citrus exocortis viroid isolate CEVd-i-2' 'Citrus exocortis viroid isolate CEVd-i-20' 'Citrus exocortis viroid isolate CEVd-i-3' 'Citrus exocortis viroid isolate CEVd-i-4' 'Citrus exocortis viroid isolate CEVd-i-5' 'Citrus exocortis viroid isolate CEVd-i-6' 'Citrus exocortis viroid isolate CEVd-i-7' 'Citrus exocortis viroid isolate CEVd-i-8' 'Citrus exocortis viroid isolate CEVd-i-9' 'Citrus exocortis viroid isolate CEVd-t-1' 'Citrus exocortis viroid isolate CEVd-t-10' 'Citrus exocortis viroid isolate CEVd-t-11' 'Citrus exocortis viroid isolate CEVd-t-12' 'Citrus exocortis viroid isolate CEVd-t-13' 'Citrus exocortis viroid isolate CEVd-t-15' 'Citrus exocortis viroid isolate CEVd-t-2' 'Citrus exocortis viroid isolate CEVd-t-4' 'Citrus exocortis viroid isolate CEVd-t-5' 'Citrus exocortis viroid isolate CEVd-t-6' 'Citrus exocortis viroid isolate CEVd-t-7' 'Citrus exocortis viroid isolate CEVd-t-8' 'Citrus exocortis viroid isolate CEVd-t-9' 'Citrus exocortis viroid isolate CEVd-tun-cl1' 'Citrus exocortis viroid isolate CEVd-tun-cl2' 'Citrus exocortis viroid isolate CEVd-tun-cl3' 'Citrus exocortis viroid isolate CEVd-tun-cl4' Citrus_exocortis_viroid_isolate_CEVd10 Citrus_exocortis_viroid_isolate_CEVd11 Citrus_exocortis_viroid_isolate_CEVd12 Citrus_exocortis_viroid_isolate_CEVd13 Citrus_exocortis_viroid_isolate_CEVd14 Citrus_exocortis_viroid_isolate_CEVd15 Citrus_exocortis_viroid_isolate_CEVd16 Citrus_exocortis_viroid_isolate_CEVd17 Citrus_exocortis_viroid_isolate_CEVd18 Citrus_exocortis_viroid_isolate_CEVd19 Citrus_exocortis_viroid_isolate_CEVd2 Citrus_exocortis_viroid_isolate_CEVd20 Citrus_exocortis_viroid_isolate_CEVd3 Citrus_exocortis_viroid_isolate_CEVd4 Citrus_exocortis_viroid_isolate_CEVd5 Citrus_exocortis_viroid_isolate_CEVd6 Citrus_exocortis_viroid_isolate_CEVd7 Citrus_exocortis_viroid_isolate_CEVd8 Citrus_exocortis_viroid_isolate_CEVd9 Citrus_exocortis_viroid_isolate_CSC07 Citrus_exocortis_viroid_isolate_CSC10 Citrus_exocortis_viroid_isolate_CSC11 Citrus_exocortis_viroid_isolate_CSC9 'Citrus exocortis viroid isolate Ci-1' 'Citrus exocortis viroid isolate Ci-2' 'Citrus exocortis viroid isolate Ci-5' 'Citrus exocortis viroid isolate Ci-8' Citrus_exocortis_viroid_isolate_GBI2 Citrus_exocortis_viroid_isolate_GBI4 'Citrus exocortis viroid isolate Hn-G1' 'Citrus exocortis viroid isolate ISA 1-CT-I' 'Citrus exocortis viroid isolate ISA 2-SR-I' 'Citrus exocortis viroid isolate ISA 3-RC-I' 'Citrus exocortis viroid isolate ISA 8-NA-I' Citrus_exocortis_viroid_isolate_LMPE3 Citrus_exocortis_viroid_isolate_LMPE4 Citrus_exocortis_viroid_isolate_LMPE7 Citrus_exocortis_viroid_isolate_LMPEm Citrus_exocortis_viroid_isolate_NiagD11 Citrus_exocortis_viroid_isolate_S1 Citrus_exocortis_viroid_isolate_S2 Citrus_exocortis_viroid_isolate_S3 Citrus_exocortis_viroid_isolate_Severe_clone_1 Citrus_exocortis_viroid_isolate_Severe_clone_2 Citrus_exocortis_viroid_isolate_Severe_clone_3 Citrus_exocortis_viroid_isolate_Sj_3 'Citrus exocortis viroid isolate Sj-Slo' 'Citrus exocortis viroid isolate T1-1' 'Citrus exocortis viroid isolate T2-1' Citrus_exocortis_viroid_isolate_TL1 Citrus_exocortis_viroid_isolate_TL11 Citrus_exocortis_viroid_isolate_TL3 Citrus_exocortis_viroid_isolate_TL5 Citrus_exocortis_viroid_isolate_TL7 Citrus_exocortis_viroid_isolate_TL8 Citrus_exocortis_viroid_isolate_a Citrus_exocortis_viroid_isolate_b Citrus_exocortis_viroid_isolate_c Citrus_exocortis_viroid_isolate_ca6 Citrus_exocortis_viroid_isolate_d Citrus_exocortis_viroid_isolate_imp1 Citrus_exocortis_viroid_isolate_imp2 Citrus_exocortis_viroid_isolate_imp3 Citrus_exocortis_viroid_isolate_soR2 Citrus_exocortis_viroid_isolate_soV1 Citrus_exocortis_viroid_isolate_soWn3 Citrus_exocortis_viroid_isolate_ver1 Citrus_exocortis_viroid_isolate_ver2 'Citrus exocortis viroid strain severe CEVd-HN' 'Citrus exocortis viroid strain severe CEVd-YN' Citrus_exocortis_viroid_variant_AD Citrus_exocortis_viroid_variant_ADG Citrus_exocortis_viroid_variant_BF Citrus_exocortis_viroid_variant_E127 Citrus_exocortis_viroid_variant_E55K Citrus_exocortis_viroid_variant_FO Citrus_exocortis_viroid_variant_KA Citrus_exocortis_viroid_variant_MA 'Citrus exocortis viroid, host=Vicia faba' 'Citrus exocortis viroid, strain de26' 'Citrus exocortis viroid, strain yellow corky vein' 'citrus exocortis viroid Gynura, CEVg' 'citrus exocortis viroid citron, CEVc' 'citrus exocortis viroid tomato hybrid callus, CEVcls 370 ' 'citrus exocortis viroid tomato hybrid, CEVt' 'citrus exocortis viroid tomato, CEVt' ; END; BEGIN TAXA; TITLE Taxa2; DIMENSIONS NTAX=419; TAXLABELS Citrus_cachexia_viroid 'Citrus cachexia viroid isolate ISA 4-CT-I' 'Citrus cachexia viroid isolate X-701-1' 'Citrus cachexia viroid isolate X-701-2' 'Citrus cachexia viroid isolate X-701-3' 'Citrus cachexia viroid isolate X-701-M' 'Citrus cachexia viroid isolate X-704-1' 'Citrus cachexia viroid isolate X-704-2' 'Citrus cachexia viroid isolate X-704-3' 'Citrus cachexia viroid isolate X-704-M' 'Citrus cachexia viroid isolate X-707-1' 'Citrus cachexia viroid isolate X-707-2' 'Citrus cachexia viroid isolate X-707-3' 'Citrus cachexia viroid isolate X-707-4' 'Citrus cachexia viroid isolate X-707-M' 'Citrus cachexia viroid isolate X-712-1' 'Citrus cachexia viroid isolate X-712-2' 'Citrus cachexia viroid isolate X-712-3' 'Citrus cachexia viroid isolate X-712-M' 'Citrus cachexia viroid isolate X-715-1' 'Citrus cachexia viroid isolate X-715-2' 'Citrus cachexia viroid isolate X-715-M' Citrus_gummy_bark_viroid_strain_cachexia Citrus_viroid_II 'Citrus viroid II isolate CVd II HN-01' 'Citrus viroid II isolate CVd II HN-02' 'Citrus viroid II isolate CVd II HN-03' Citrus_viroid_IIa_sequence Citrus_viroid_IIb_Cachexia_sequence_302 Cucumber_pale_fruit_viroid_CPFV_301 Cucumber_pale_fruit_viroid_CPFV_303 Dapple_peach_fruit_disease_viroid_from_peach_dapple_fruit Dapple_plum_and_peach_fruit_disease_viroid_from_plum_and_peach_dapple_fruits Dapple_plum_and_peach_fruit_disease_viroid_isolate_FP1 Dapple_plum_and_peach_fruit_disease_viroid_isolate_FP2 Dapple_plum_and_peach_fruit_disease_viroid_isolate_FP3 'Genomic RNA of hop stunt viroid type HSV-c 303' 'Genomic RNA of hop stunt viroid type HSV-g 297' Genomic_of_hop_stunt_viroid Grapevine_viroid_Hop_stunt_viroid_297 'Grapevine viroid grapevine isolate SHV-gGV complete genome 296' Hop_Stunt_Viroid_HSV_297 Hop_Stunt_Viroid_HSVd_298 Hop_stunt_viroid 'Hop stunt viroid - citrus complete sequence 303' 'Hop stunt viroid - citrus strain CC-A isolate 1' 'Hop stunt viroid - citrus strain CC-A isolate 2' 'Hop stunt viroid - citrus strain CC-A isolate 3' 'Hop stunt viroid - citrus strain CC-A isolate 4' 'Hop stunt viroid - citrus strain CC-A isolate 5' 'Hop stunt viroid - citrus strain CC-A isolate 6' 'Hop stunt viroid - citrus strain CC-B isolate 1' 'Hop stunt viroid - citrus strain CC-B isolate 2' 'Hop stunt viroid - citrus strain CC-B isolate 3' 'Hop stunt viroid - citrus strain CC-B isolate 4' 'Hop stunt viroid - citrus strain CC-B isolate 5' 'Hop stunt viroid - citrus strain CC-B isolate 6' 'Hop stunt viroid - citrus strain CC-C isolate 1' 'Hop stunt viroid - citrus strain CC-C isolate 2' 'Hop stunt viroid - citrus strain CC-C isolate 3' 'Hop stunt viroid - citrus strain CC-C isolate 4' 'Hop stunt viroid - citrus strain CC-C isolate 5' 'Hop stunt viroid - citrus strain CC-C isolate 6' 'Hop stunt viroid - citrus strain CC-D isolate 1' 'Hop stunt viroid - citrus strain CC-D isolate 2' 'Hop stunt viroid - citrus strain CC-D isolate 3' 'Hop stunt viroid - citrus strain CC-D isolate 4' 'Hop stunt viroid - citrus strain CC-D isolate 5' 'Hop stunt viroid - citrus strain CC-D isolate 6' 'Hop stunt viroid - citrus strain CC-E isolate 1' 'Hop stunt viroid - citrus strain CC-E isolate 2' 'Hop stunt viroid - citrus strain CC-E isolate 3' 'Hop stunt viroid - citrus strain CC-E isolate 4' 'Hop stunt viroid - citrus strain CC-E isolate 5' 'Hop stunt viroid - citrus strain CC-E isolate 6' 'Hop stunt viroid - citrus strain CC-F isolate 1' 'Hop stunt viroid - citrus strain CC-F isolate 2' 'Hop stunt viroid - citrus strain CC-F isolate 3' 'Hop stunt viroid - citrus strain CC-F isolate 4' 'Hop stunt viroid - citrus strain CC-F isolate 5' 'Hop stunt viroid - citrus strain CC-F isolate 6' 'Hop stunt viroid - citrus strain CC-G isolate 1' 'Hop stunt viroid - citrus strain CC-G isolate 2' 'Hop stunt viroid - citrus strain CC-G isolate 3' 'Hop stunt viroid - citrus strain CC-G isolate 4' 'Hop stunt viroid - citrus strain CC-G isolate 5' 'Hop stunt viroid - citrus strain CC-G isolate 6' 'Hop stunt viroid - citrus strain CC-H isolate 1' 'Hop stunt viroid - citrus strain CC-H isolate 2' 'Hop stunt viroid - citrus strain CC-H isolate 3' 'Hop stunt viroid - citrus strain CC-H isolate 4' 'Hop stunt viroid - citrus strain CC-H isolate 5' Hop_stunt_viroid_German_grapevine_cultivar_Riesling_genome_298 Hop_stunt_viroid_HSV_Korean_strain_mRNA_for_viroid_297 Hop_stunt_viroid_HSVd Hop_stunt_viroid_HSVd_isolate_genome_from_grapefruit_299 'Hop stunt viroid RNA complete genome isolate hAIw36-5 296' 'Hop stunt viroid RNA complete genome isolate hKF82-4 297' 'Hop stunt viroid citrus isolate HSV-cit variant 1 302' 'Hop stunt viroid citrus isolate HSV-cit variant 2 302' 'Hop stunt viroid clone 10HSVd2-6' 'Hop stunt viroid clone 11HSVd2-5' 'Hop stunt viroid clone 11HSVd2-7' 'Hop stunt viroid clone 11R-HSVd' 'Hop stunt viroid clone 15R-HSV' 'Hop stunt viroid clone 16F-HSV' 'Hop stunt viroid clone 17F-HSVd' 'Hop stunt viroid clone 1R-HSVd' 'Hop stunt viroid clone 1aHSVd11-1' 'Hop stunt viroid clone 1aHSVd11-2' 'Hop stunt viroid clone 1aHSVd11-3' 'Hop stunt viroid clone 2hsvdh2-1' 'Hop stunt viroid clone 2hsvdh2-2' 'Hop stunt viroid clone 2hsvdh2-3' 'Hop stunt viroid clone 2hsvdh2-4' 'Hop stunt viroid clone 2hsvdh2-6' 'Hop stunt viroid clone 2hsvdh2-7' 'Hop stunt viroid clone 31HSVd2-1' 'Hop stunt viroid clone 31HSVd2-2' 'Hop stunt viroid clone 3HSVd2-11' 'Hop stunt viroid clone 3HSVd2-14' 'Hop stunt viroid clone 3HSVd2-3' 'Hop stunt viroid clone 3R-HSV' 'Hop stunt viroid clone 3hsvdh3-4' 'Hop stunt viroid clone 3hsvdh3-5' 'Hop stunt viroid clone 48HSVd2-12' 'Hop stunt viroid clone 4F-HSV' 'Hop stunt viroid clone 4HSVd2-2' 'Hop stunt viroid clone 4aHSVd11-2' 'Hop stunt viroid clone 4aHSVd11-5' 'Hop stunt viroid clone 4aHSVd11-6' 'Hop stunt viroid clone 5 hsvdp11-1' 'Hop stunt viroid clone 5 hsvdp11-2' 'Hop stunt viroid clone 5F-HSV' 'Hop stunt viroid clone 5HSVd2-9' 'Hop stunt viroid clone 5aHSVd11-1' 'Hop stunt viroid clone 5aHSVd11-2' 'Hop stunt viroid clone 5hsvdh5-1' 'Hop stunt viroid clone 5hsvdh5-2' 'Hop stunt viroid clone 5hsvdh5-3' 'Hop stunt viroid clone 62HSVd2-4' 'Hop stunt viroid clone 67HSVd 2-8' 'Hop stunt viroid clone 67HSVd2-1' 'Hop stunt viroid clone 67HSVd2-3' 'Hop stunt viroid clone 67HSVd2-6' 'Hop stunt viroid clone 6aHSVd11-1' 'Hop stunt viroid clone 6aHSVd11-2' 'Hop stunt viroid clone 6aHSVd11-4' 'Hop stunt viroid clone 6aHSVd11-5' 'Hop stunt viroid clone 7HSVd2-2' 'Hop stunt viroid clone 7HSVd2-4' Hop_stunt_viroid_clone_8153 Hop_stunt_viroid_clone_8164 'Hop stunt viroid clone A2-2-1' 'Hop stunt viroid clone A2-2-5' 'Hop stunt viroid clone A35-2-1' 'Hop stunt viroid clone A35-2-3' 'Hop stunt viroid clone A35-2-4' 'Hop stunt viroid clone A35-2-5' Hop_stunt_viroid_clone_B1B Hop_stunt_viroid_clone_B6B Hop_stunt_viroid_clone_BA1B Hop_stunt_viroid_clone_BA4A_and_BA7B Hop_stunt_viroid_clone_Demetra Hop_stunt_viroid_clone_HSVd Hop_stunt_viroid_clone_HSVd_2 Hop_stunt_viroid_clone_HSVd1 Hop_stunt_viroid_clone_HSVd12 Hop_stunt_viroid_clone_HSVd2 Hop_stunt_viroid_clone_HSVd22 Hop_stunt_viroid_clone_HSVd3 'Hop stunt viroid clone He HSVd2-1' 'Hop stunt viroid clone He HSVd2-2' 'Hop stunt viroid clone He HSVd2-6' Hop_stunt_viroid_clone_JC1_and_JC5 Hop_stunt_viroid_clone_JJ1_and_JJ4 Hop_stunt_viroid_clone_JJ3 Hop_stunt_viroid_clone_Jena 'Hop stunt viroid clone Jx-C1-1' Hop_stunt_viroid_clone_Konstantinos 'Hop stunt viroid clone L5HSVdP11-1' 'Hop stunt viroid clone L5HSVdP11-10' Hop_stunt_viroid_clone_PR1A Hop_stunt_viroid_clone_PR1B Hop_stunt_viroid_clone_PR2A Hop_stunt_viroid_clone_Paiko Hop_stunt_viroid_clone_Pinovo 'Hop stunt viroid clone Tu HSVd 1-13' 'Hop stunt viroid clone Tu HSVd 1-16' 'Hop stunt viroid clone Tu HSVd 2-7' Hop_stunt_viroid_clone_Voras 'Hop stunt viroid clone X5HSVd11-1' 'Hop stunt viroid clone X5HSVd11-2' 'Hop stunt viroid clone X5HSVd11-4' Hop_stunt_viroid_clone_alm1261 Hop_stunt_viroid_clone_alm426 Hop_stunt_viroid_clone_cl2 Hop_stunt_viroid_clone_cl3 Hop_stunt_viroid_clone_cl4 Hop_stunt_viroid_clone_hsvd_J1 Hop_stunt_viroid_clone_hsvd_J10 Hop_stunt_viroid_clone_hsvd_J11 Hop_stunt_viroid_clone_hsvd_J12 Hop_stunt_viroid_clone_hsvd_J13 Hop_stunt_viroid_clone_hsvd_J2 Hop_stunt_viroid_clone_hsvd_J3 Hop_stunt_viroid_clone_hsvd_J4 Hop_stunt_viroid_clone_hsvd_J5 Hop_stunt_viroid_clone_hsvd_J6 Hop_stunt_viroid_clone_hsvd_J7 Hop_stunt_viroid_clone_hsvd_J8 Hop_stunt_viroid_clone_hsvd_J9 'Hop stunt viroid clone lz16 hsvdp11-1' 'Hop stunt viroid clone lz16 hsvdp11-6' 'Hop stunt viroid clone lz16 hsvdp11-7' 'Hop stunt viroid clone lz16 hsvdp11-8' 'Hop stunt viroid clone lz16 hsvdp11-9' 'Hop stunt viroid clone lz21 hsvdp11-14' 'Hop stunt viroid clone lz21 hsvdp11-24' 'Hop stunt viroid clone lz21 hsvdp11-6' 'Hop stunt viroid clone lz21 hsvdp11-7' 'Hop stunt viroid clone lz21 hsvdp11-9' 'Hop stunt viroid clone lz6 hsvdp11-5' 'Hop stunt viroid clone lz6 hsvdp11-6' 'Hop stunt viroid clone lz6 hsvdp11-8' 'Hop stunt viroid clone lz6 hsvdp11-9' 'Hop stunt viroid clone t19HSVd11-5' 'Hop stunt viroid clone t19HSVd11-6' 'Hop stunt viroid clone t42HSVd11-5' 'Hop stunt viroid clone t48HSVd11-1' 'Hop stunt viroid clone t48HSVd11-2' 'Hop stunt viroid clone t48HSVd11-4' 'Hop stunt viroid clone tz18HSVd11-1' 'Hop stunt viroid clone tz18HSVd11-3' 'Hop stunt viroid clone tz6HSVd11-4' 'Hop stunt viroid clone tz6HSVd11-5' 'Hop stunt viroid clone xz17 hsvdp11-2' 'Hop stunt viroid clone xz17 hsvdp11-3' 'Hop stunt viroid clonechi100Y-02-4-2 296' 'Hop stunt viroid clonechi100Y-02-4-4 296' 'Hop stunt viroid clonechi100Y-02-4-5 297' 'Hop stunt viroid clonechi100Y-03-2-6 296' 'Hop stunt viroid clonechi100Y-03-2-7 300' 'Hop stunt viroid clonechi100Y-03-2-8 296' Hop_stunt_viroid_grapevine_variant_IIa_sequence Hop_stunt_viroid_grapevine_variant_Ia_sequence Hop_stunt_viroid_grapevine_variant_Ib_sequence Hop_stunt_viroid_grapevine_variant_Ic_sequence Hop_stunt_viroid_grapevine_variant_Id_sequence Hop_stunt_viroid_grapevine_variant_Ie_sequence 'Hop stunt viroid isolate 09-2009-2140hs' 'Hop stunt viroid isolate 09-2009-854' 'Hop stunt viroid isolate 26X-l11m' 'Hop stunt viroid isolate 26X-l12' 'Hop stunt viroid isolate 26X-l33' 'Hop stunt viroid isolate 26x-c11' 'Hop stunt viroid isolate 26x-c33' 'Hop stunt viroid isolate 26x-l22m' 'Hop stunt viroid isolate 26x-l28' 'Hop stunt viroid isolate 26x-l4' Hop_stunt_viroid_isolate_391a Hop_stunt_viroid_isolate_570 Hop_stunt_viroid_isolate_580 Hop_stunt_viroid_isolate_676 'Hop stunt viroid isolate Aridaia-570' Hop_stunt_viroid_isolate_CA909 Hop_stunt_viroid_isolate_CQ_clone_1 Hop_stunt_viroid_isolate_CQ_clone_2 Hop_stunt_viroid_isolate_CQ_clone_3 'Hop stunt viroid isolate CVd-IIa 117' 'Hop stunt viroid isolate CVd-IIa or E819' 'Hop stunt viroid isolate CVd-IIb or Ca902' 'Hop stunt viroid isolate CVd-IIc or Ca905' Hop_stunt_viroid_isolate_CVdIIA_10uy Hop_stunt_viroid_isolate_CVdIIA_11uy Hop_stunt_viroid_isolate_CVdIIa_17uy 'Hop stunt viroid isolate CVdIIa 205-2-1' 'Hop stunt viroid isolate CVdIIa 205-2-4' 'Hop stunt viroid isolate CVdIIa 54-2-1' 'Hop stunt viroid isolate CVdIIa 54-2-2' Hop_stunt_viroid_isolate_Ca903 'Hop stunt viroid isolate GZ-1' Hop_stunt_viroid_isolate_H1 Hop_stunt_viroid_isolate_HCSC01 Hop_stunt_viroid_isolate_HCSC08 Hop_stunt_viroid_isolate_HCSC10 Hop_stunt_viroid_isolate_HNiagD08 Hop_stunt_viroid_isolate_HSVd 'Hop stunt viroid isolate HSVd-IIa 815-11' 'Hop stunt viroid isolate HSVd-IIa 815-3an' 'Hop stunt viroid isolate HSVd-IIa 816-8' 'Hop stunt viroid isolate HSVd-IIa 817' 'Hop stunt viroid isolate HSVd-IIb 814-1' 'Hop stunt viroid isolate HSVd-IIc 816-7' 'Hop stunt viroid isolate HSVd-gb' Hop_stunt_viroid_isolate_HSVd10 Hop_stunt_viroid_isolate_HSVd11 Hop_stunt_viroid_isolate_HSVd12 Hop_stunt_viroid_isolate_HSVd13 Hop_stunt_viroid_isolate_HSVd14 Hop_stunt_viroid_isolate_HSVd15 Hop_stunt_viroid_isolate_HSVd16 Hop_stunt_viroid_isolate_HSVd17 Hop_stunt_viroid_isolate_HSVd2 Hop_stunt_viroid_isolate_HSVd22 Hop_stunt_viroid_isolate_HSVd3 Hop_stunt_viroid_isolate_HSVd32 Hop_stunt_viroid_isolate_HSVd4 Hop_stunt_viroid_isolate_HSVd42 Hop_stunt_viroid_isolate_HSVd5 Hop_stunt_viroid_isolate_HSVd52 Hop_stunt_viroid_isolate_HSVd6 Hop_stunt_viroid_isolate_HSVd62 Hop_stunt_viroid_isolate_HSVd7 Hop_stunt_viroid_isolate_HSVd72 Hop_stunt_viroid_isolate_HSVd8 Hop_stunt_viroid_isolate_HSVd9 Hop_stunt_viroid_isolate_HSVdE117 Hop_stunt_viroid_isolate_IIaI14 Hop_stunt_viroid_isolate_IIaI22 Hop_stunt_viroid_isolate_IIaI3 Hop_stunt_viroid_isolate_IIaI4 Hop_stunt_viroid_isolate_IIaS1S3 Hop_stunt_viroid_isolate_IIaS1S3_HSVd Hop_stunt_viroid_isolate_IIaS4 Hop_stunt_viroid_isolate_IIbI1 Hop_stunt_viroid_isolate_IIbI13 Hop_stunt_viroid_isolate_IIbI2_ Hop_stunt_viroid_isolate_IIbS2 Hop_stunt_viroid_isolate_IIcI4 Hop_stunt_viroid_isolate_IIcI914 Hop_stunt_viroid_isolate_IIcS1 'Hop stunt viroid isolate ISA 5-CT-I' 'Hop stunt viroid isolate ISA 6-SR-I' 'Hop stunt viroid isolate ISA 7-RC-I' Hop_stunt_viroid_isolate_Jabong 'Hop stunt viroid isolate Kernitsa-327' Hop_stunt_viroid_isolate_LMSX2 Hop_stunt_viroid_isolate_Mor17 Hop_stunt_viroid_isolate_Mor24 Hop_stunt_viroid_isolate_Mor4 Hop_stunt_viroid_isolate_Mor61 Hop_stunt_viroid_isolate_Mor9 'Hop stunt viroid isolate PM-26X clone 26x-p26' 'Hop stunt viroid isolate PM-26X clone 26x-p3' 'Hop stunt viroid isolate PM-26X clone 26x-p35' 'Hop stunt viroid isolate PM-26X clone 26x-p44' 'Hop stunt viroid isolate PM-26x clone 26x-c13' 'Hop stunt viroid isolate PM-26x clone 26x-c18' 'Hop stunt viroid isolate PM-26x clone 26x-c19' 'Hop stunt viroid isolate PM-26x clone 26x-c2' 'Hop stunt viroid isolate PM-26x clone 26x-c22' 'Hop stunt viroid isolate PM-26x clone 26x-c23' 'Hop stunt viroid isolate PM-26x clone 26x-c26' 'Hop stunt viroid isolate PM-26x clone 26x-c29' 'Hop stunt viroid isolate PM-26x clone 26x-c45' Hop_stunt_viroid_isolate_Roma1 Hop_stunt_viroid_isolate_Rouge_de_Rousillon_D08 Hop_stunt_viroid_isolate_SC_clone_1 Hop_stunt_viroid_isolate_SC_clone_2 Hop_stunt_viroid_isolate_SC_clone_3 Hop_stunt_viroid_isolate_Tahiti_lime_1 Hop_stunt_viroid_isolate_Tahiti_lime_11 Hop_stunt_viroid_isolate_Tahiti_lime_2 Hop_stunt_viroid_isolate_Tahiti_lime_3 Hop_stunt_viroid_isolate_Tahiti_lime_4 Hop_stunt_viroid_isolate_Tahiti_lime_5 Hop_stunt_viroid_isolate_Tahiti_lime_6 Hop_stunt_viroid_isolate_Tahiti_lime_7 Hop_stunt_viroid_isolate_Tahiti_lime_8 Hop_stunt_viroid_isolate_Thailand Hop_stunt_viroid_isolate_UMCX1 Hop_stunt_viroid_isolate_Whang Hop_stunt_viroid_isolate_apricot_Ring_Pox 'Hop stunt viroid isolate cl-c19' 'Hop stunt viroid isolate cl-c25' 'Hop stunt viroid isolate cl-c3' 'Hop stunt viroid isolate cl-c37' 'Hop stunt viroid isolate cl-c51' Hop_stunt_viroid_isolate_dapple_plum_fruit Hop_stunt_viroid_isolate_e Hop_stunt_viroid_isolate_f Hop_stunt_viroid_isolate_hAIw36 Hop_stunt_viroid_isolate_hAIw5 Hop_stunt_viroid_isolate_hFK82 Hop_stunt_viroid_isolate_hKFKi Hop_stunt_viroid_isolate_hKIw Hop_stunt_viroid_isolate_hSIw 'Hop stunt viroid isolate sh-ay-01' Hop_stunt_viroid_isolate_soR2 Hop_stunt_viroid_isolate_soV1 Hop_stunt_viroid_isolate_soWn3 Hop_stunt_viroid_sequence_almond_isolate_HSVd Hop_stunt_viroid_sequence_almond_isolate_HSVd2 Hop_stunt_viroid_strain_citrus_yellow_corky_vein_viroid_A Hop_stunt_viroid_strain_split_bark Hop_stunt_viroid_strain_yellow_corky_vein Hop_stunt_viroid_strain_yellow_corky_vein2 'Hop stunt viroid variant 10SA1-IW1 302' 'Hop stunt viroid variant 10SA1-IW2 301' Hop_stunt_viroid_variant_AB2 Hop_stunt_viroid_variant_AD1 Hop_stunt_viroid_variant_AD2 Hop_stunt_viroid_variant_BF Hop_stunt_viroid_variant_E120P8 Hop_stunt_viroid_variant_E127 Hop_stunt_viroid_variant_E180 Hop_stunt_viroid_variant_EX1 Hop_stunt_viroid_variant_FA Hop_stunt_viroid_variant_FO Hop_stunt_viroid_variant_KS14 Hop_stunt_viroid_variant_MA Hop_stunt_viroid_variant_MK Hop_stunt_viroid_variant_WP Hop_stunt_viroid_variant_WS1 Hop_stunt_viroid_variant_WS2 Hop_stunt_viroid2 Hop_stunt_viroidHSV_sequence_297 hop_stunt_viroid_isolate_IIsc2 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M15540] TITLE CEVd; LINK TAXA = Taxa1; DIMENSIONS NCHAR=416; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] 'Citrus Exocortis Viroid CEVdg-M' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGACGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGAT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGAACCGCTTTTCTT---ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus Exocortis Viroid CEVdg-S' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATAGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGAT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTTCTT--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGG--TCCCCG--G-GGAAACCTGGAGGAGGTCGAGGTCGG-GGGGGCTCAAC-AGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCTTCGCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAA-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_1 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGGACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCTCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGAT-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_2 CGGGAATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG---AA-AAAAGACGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAAAAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTGCGTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTGGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTGT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_2b CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTGACCCTGCAGGGTACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAAACCCCCAA-ACCGCTTTTCTTAC-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_4 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGGACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCTCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGAT-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid AD1_CEVd plus strand' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAGCAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid CEV-A' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGGACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCTCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTGT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid CEV-DE30' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGGAAGCTTCTCTCTGGAT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAG-TACGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid CEV-JA' CGGG-ATCTTTCTTGAGGTT--CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGGACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCTCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTGT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid CEV-JB' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CACCTCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGAT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCTC 'Citrus exocortis viroid CEV-g' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGG-AGAAAGAG--AAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGGACTAC-TGCTTGGGCGGCCGCGGATCACTGGTCTGCAGCGG-AGAAACAGG-ACCTGG--TGTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGTTGCGC-CCCCTCGCCGGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAC-ACTACTGAAGCTTTAA--CCCCAA-GCCGCTTTTCTTAT-ATCTTCACTGTTCTCCGGGCCAGGGTG-AAAGCCCCCCGAACCCTAGATTGGGACCCT- 'Citrus exocortis viroid CEVd-225' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGTAAAAG-AAAA-AAGAGGCGGGGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCAAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG--AGC-CTGAGCGCCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCGT-ACCGCTTTTCTTGA-TTCTCAGCTGCTCTCCGGGCGAGGGTGTAAAGCCCTCGGAACCCTAGAGTGGTCCC--- Citrus_exocortis_viroid_De25 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGGACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGAT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-GCCGCTTTTCTTGT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_E117_V1 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_E117_V2 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_E117_V3 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAA-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_E117_V4 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGACCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_E117_V5 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAGAAAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_E117_V6 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTATTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_E117_V7 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCCGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_E117_V8 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-GAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_E117_V9 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAGAAAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAA-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_L CGGG-ATCTTTCCTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGCCAGAATAAGAAAAAAGAATGGCGGAAGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGTCGGAC-TGCTGCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCATCA--TCCGATCGTCGCTGCAGGCTCTTCG--CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCAAA-GCCGCTTTTTCTCT-ATCTTAGCTGGTCTCCGGGCGAGGGTG-AAAGCCCGTGGAACCCTGG--TAGGTCCCT- Citrus_exocortis_viroid_RNA_sequence CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGGACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCTCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTGT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_Sj_1 CGGG-AACTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGTCAAAGAAAAAAGAACGGCGGCGAGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCGGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCTCG--CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--ACCCAA-GCCGCTTTTTCTAA-TTCTTCTCTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_Sj_2 CGGG-AACTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGTAAAGAAAAAAGAACGGCGGCAAGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAGCGGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCTCGA-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--ACCCAA-GCCGCTTTTTCTGA-TTCTTCTCTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid Sj-LS' CGGG-AACTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGTAAAGAAAAAA-GAACGGCGGCGAGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAGCGGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCTCGA-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--ACCCAA-GCCGCTTTTTCTTA-ATCTTCTCTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid clone A2-C-1' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAGAAAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGAAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid clone A2-C-2' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAGAAAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid clone A2-C-3' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAGAAAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGAAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGAAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid clone A2-C-4' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAGAAAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTAGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid clone A2-C-5' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAGAAAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAA-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid clone A2-C-7' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAGAAAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGACCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTTGCTGCCGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTATAACCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid clone A35-C-1' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid clone A35-C-2' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAGAAAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid clone A35-C-3' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAA-GCAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_clone_CEVd2 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGGGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--GGGGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCAAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGC-CTGCGCGCCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCGT-ACCGCTTTTCTTGA-TTCTACACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_clone_CEVd22 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGGGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCAAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGC-CTGCGCGCCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCGT-ACCGCTTTTCTTGA-TTCTACACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_clone_GV4 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_from_Colombia CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAGAAAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGCTCAAC-AGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCTTCGCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate 043-8uy' CGGG-ATCTTTCTTGAGGTTC-CTGT---AAAGCTCCCCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAAA-AACGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGGACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACGACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate 054-10uy' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-GCCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate 054-13uy' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGC--GG-AAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCTCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTGT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_1 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAGAAAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCTCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTGA-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate 150-10uy' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-GCCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate 150-4uy' CGGG-AGCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAAGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACA-C-TGCTTCGGTCGCCGCGGATCGCTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCTCGC-CCCCTCGCCCGA-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAG--CCCCAA-ACCGCTTTTCTTGT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGACTGGGTCCCT- 'Citrus exocortis viroid isolate 1863019-4' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAGAAAAAGAATCGGCGGCAGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAC-ACCGCTTTTCTTCT-ATCTTTGCTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate 205-E-1 Uy' CGGG-AACTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCGGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG----GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGACTGGGTCCCT- 'Citrus exocortis viroid isolate 205-E-2 Uy' CGGG-AACTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGACTGGGTCCCT- 'Citrus exocortis viroid isolate 205-E-5 Uy' CGGG-AACTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG----GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGACTGGGTCCCT- 'Citrus exocortis viroid isolate 205-E-7 Uy' CGGG-AACTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCCCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGACTGGGTCCCT- 'Citrus exocortis viroid isolate 206-2' CGGG-AACTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTGT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGACTGGGTCCCT- 'Citrus exocortis viroid isolate 206-3uy' CGGG-AACTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG----GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGACTGGGTCCCT- 'Citrus exocortis viroid isolate 206-4uy' CGGG-AACTTTCTTGAGGTTC-CTGT---GGAGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCTGGGGGGGTACAGC-TGCTTCGGACGCCGCGGATCACTGGCGCACAGCGG-AGAAACACG-ACCTCG--CCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGAACGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATTTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTATACTGGGTCCCT- Citrus_exocortis_viroid_isolate_3123575 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAGAAAAA-AAGAGGCGGCAGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAT-ACCGCTTTTCTTCT-ATCTTTGCTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_3823889 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAGAAAAAGAAACGGCGGCAGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGGTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTTTCCT-ATCTTTGCTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate 454-FI-I' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAGGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate 54-E-1 Uy' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate 54-E-18 Uy' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate 54-E-3 Uy' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGGGGGGGGTACAGC-CGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-TCCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_89002594 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAATCCTTCAGGGATTCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGGTAGAAACAGGTAGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_89002600 CGGG-ATCTTTCTTGAGGTTC-CTGCTGGGGGGCTCACCCG------------AACCTGTGCGCGCGGAAAA-GAAA-AAAAGGGGGGGGGG-GGAAAAACCGTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_8900808 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGCG---GGGAAACCTGGAGGAAGTC--------GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate 9669-FI-I' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-CAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAGGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate 9670-FI-I' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAAAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAGGTCGAGGTCGGGGGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCTCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate 9675-FI-I' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGG--TACCCG--G-GGAAACCTGGAGGAGGTCGAGGTCGG-GGGGGCTCAAC-AGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCTTCGCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_AI1 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTGT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_AI3 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_BSE CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGTAAAAG-AAAA-AAGAGGCGGGGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCAAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGC-CTGCGCGCCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCGT-ACCGCTTTTCTTGA-TTCTCAGCTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_CEVd CGGG-ATCCTTCTTGAGATTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATTTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd E-117' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAAAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTGT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-Croatia' CGGG-AACTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTCCAAC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGTCGCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-GCCGCTTTTCTTGT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGACTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-DI 129' CGGG-AACTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG--AAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCGTATCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAC-TCCGCTTTTCTTGA-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGACTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-DI 56' CGGG-AACTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG--AAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCGTTTCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-GCCGCATATCTTGA-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGACTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-HB' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-Italy-BL China' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTTCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGCCTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGGACGAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCTTCGCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAA-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-TV' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAGAAAAA-AAGAGGCGGCTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCGTTTCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTCT-ATCTTTGCTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-XNM-HJ Guangdong-YC' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGT-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACCGC-TGCTTCACCCACAGCGCATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-XNM-XY Guangdong-YC' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGT-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCG{AC}CCACCGCGCATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-XNM-YZ Guangdong-YC' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCCTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTGA-ATCTTCACTGCTCTCCGGACGAGGGTG-AAAGCCCTCGGAGCCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-XNM-ZK Guangdong-YC' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCA--A-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTGA-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAGGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-ZGS-ZK China' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCTTCGCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAA-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-f-1' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-f-2' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCCCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-f-3' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCTCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-f-4' CGGG-ATCTTTCTTGAGGTTCTCTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCTTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-f-5' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCTTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-f-6' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGAT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-gb4' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGTAAAAG-AAAA-AAGAGGCGGGGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCAAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGC-CTGCGCGCCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCGT-ACCGCTTTTCTTGA-TTCTCAGCTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-i-1' CGGG-AACTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAATCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG---GGGGACAGC-TGCTTCGGTCGCCGCGGATCACTGACGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCCGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCTCGC-CCCCTCGCCCGG-AGCTCCTCTCTGGAG-ACTATCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-GCCGCTTTTCTTGT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-i-10' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTCCGGTCGCCGCGGATCACTGGCGTCCGGCGG-AGAAACGGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-i-11' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAATCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCGGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-i-12' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAGAAG-AAAA-AAGAGGCGGCGGGG--AAGAAATCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-i-13' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAATCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCCTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-i-14' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAGCTGAAGCCTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-i-15' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCCTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGGGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-i-16' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------GCCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCCTCAG--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-i-17' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCCTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-i-18' CGGG-AACTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTTGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGAT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGAACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGACTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-i-19' CGGG-AACTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTTGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGAACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGACTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-i-2' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAGAG--AAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGGACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTCCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCTCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-GCCGCTTTTCTTAT-GTCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-i-20' CGGG-AACTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAGAAG-AAAA-AGATGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTTGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGAACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGACTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-i-3' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAGAAAAA-AGATGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-i-4' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGGTAGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-i-5' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-i-6' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCCCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-i-7' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCGGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-i-8' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-i-9' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTTCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCCTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-t-1' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-GCCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-t-10' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG--AAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-GCCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-t-11' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG--AAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-t-12' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-t-13' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAGGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-t-15' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCGA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-t-2' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTTCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAA-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-t-4' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-t-5' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-GCCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-t-6' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-t-7' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-t-8' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGAGTCCCT- 'Citrus exocortis viroid isolate CEVd-t-9' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-GCCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-tun-cl1' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGTAAAAG-AAAA-AAGAGGCGGGGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCAAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGC-CTGCGCGCCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCGT-ACCGCTTTTCTTGA-TTCTCAGCTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-tun-cl2' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCAAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGC-CTGCGCGCCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAT-ACCGCTTTTCTTGT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-tun-cl3' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGTAAAAG-AAAA-AAGAGGCGGGGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGGACGAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCTTCGCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCGT-ACCGCTTTTCTTGA-TTCTCAGCTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate CEVd-tun-cl4' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGTAAAAG-AAAA-AAGAGGCGGGGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCACTGCGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGC-CTGCGCGCCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCGT-ACCGCTTTTCTTGA-TTCTCAGCTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_CEVd10 CGGG-ATTTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_CEVd11 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATTGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_CEVd12 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAATCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_CEVd13 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCCTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_CEVd14 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_CEVd15 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_CEVd16 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_CEVd17 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGA-GTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_CEVd18 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGA-GTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_CEVd19 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTGCCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_CEVd2 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGCGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATGGCGGGAGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACGGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_CEVd20 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_CEVd3 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAGA-AGATGGCGGGAGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_CEVd4 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATGGCGGGAGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_CEVd5 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATGGCGGGAGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_CEVd6 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGCG-AGAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_CEVd7 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG--AAA-AAGAGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTTGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_CEVd8 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTCG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_CEVd9 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-GGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_CSC07 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCCCCTG------------ACCCTGCAGGCAGAAAAAG--AAG-AAGAGGCGGGTGGG-GAAGAAGTTCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGCGTTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCTCTGCCGTCCAGCGG-ACAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGGTCGTCGCTG-AGGCGTCCCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-AGTACCCGGGGGAT-ACAACTGAAGCTTCAA--CCCCAGTATCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCCAGGGTG-AAAGCCCTCGGAACCCTACAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_CSC10 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG--AAA-AAGAGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGGTCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_CSC11 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG--AAA-AAGAGGCGGGTGGGCGAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_CSC9 CGGG-ATCGTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG--AAA-AAGAGGTGGGCGGG-GAAGAAGTCCTTCTGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTATCTCTGCTGCCTCCA-CA--TCCGGTCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTGTGCTT-AATAGCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAAAAGCAGGTTCTTG---ATCTCCGAGGCTCTCCGGCCGAGGGTG-AAAGCCCTCGGAACCCTCGAAAGGGTCCCT- 'Citrus exocortis viroid isolate Ci-1' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate Ci-2' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate Ci-5' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAGAAAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAA-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate Ci-8' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAGAAAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_GBI2 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGTAAAAG-AAAA-AAGAGGCGGGGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCAAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGC-CTGCGCGCCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCGT-ACCGCTTTTCTTGA-TTCTCAGCTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_GBI4 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGTAAAAG-AAAA-AAGAGGCGGGGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCAAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGC-CTGCGCGCCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCGT-ACCGCTTTTCTTGA-TTCTCAGCTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- 'Citrus exocortis viroid isolate Hn-G1' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTCG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- 'Citrus exocortis viroid isolate ISA 1-CT-I' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAC-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate ISA 2-SR-I' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACTAC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGTTGCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate ISA 3-RC-I' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--GAGGAAACCTGGAGGAAGTCGAGGTCGG--GGGGGACGAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCTTCGCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate ISA 8-NA-I' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--GAAGGAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCAAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AACTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGC-CTGCGCGCCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAT-ACCGCTTTTCTTGT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_LMPE3 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGTAAAAG-AAAA-AAGAGGCGGGGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCAAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGC-CTGCGCGCCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCGT-ACCGCTTTTCTTGA-TTCTCAGCTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_LMPE4 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGCACACC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGGCAACG-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_LMPE7 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGTAAAAG-AAAA-AAGAGGCGGGGGGG-AAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCAAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGC-CTGCGCGCCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCGT-ACCGCTTTTCTTGA-TTCTCAGCTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_LMPEm CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGTAAAAG-AAAA-AAGAGGCGGGGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCAAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGC-CTGCGCGCCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCGT-ACCGCTTTTCTTGA-TTCTCAGCTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_NiagD11 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG--AAA-AAGAGGCGGGTGGG-GAAGATGTTCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGCGGTCGG--GGGGAGCTTC-TGCCTCGGGCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCACTG-AGGCGTCACCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_S1 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAAAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGGACGAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCTTCGCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTGT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_S2 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAAAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_S3 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGGACGAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCTTCGCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCTA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_Severe_clone_1 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGGACGAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCTTCGCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_Severe_clone_2 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGGACGAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCTTCGCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_Severe_clone_3 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGGACGAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCTTCGCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_Sj_3 CGGG-AACTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGTAAAGAAAAAAGAACGGCGGCAGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGCAGCGGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCTCGA-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--ACCCAA-GCCGCTTTTTCTTA-ATCTTCTCTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate Sj-Slo' CGGG-A{AT}CTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGTAAAGAAAAAA-GAACGGCGGCGAGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAGCGGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCTCG{AC}-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--ACCCAA-GCCGCTTTTTCTTA-{AT}TCTTCTCTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate T1-1' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGGTCAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid isolate T2-1' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTGT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_TL1 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCCGGCTCCA-CA--TCCGATGGTCGTTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_TL11 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_TL3 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_TL5 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_TL7 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_TL8 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_a CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGGGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCAAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGC-CTGCGCGCCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCGT-ACCGCTTTTCTTGA-TTCTACACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_b CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCGGGCAGGAAAAG-AAAA-AAGAGGCGGGGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCAAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGC-CTGCGCGCCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCGT-ACCGCTTTTCTTGA-TTCTACACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_c CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGGGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCAAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGC-CTGCGCGCCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCGT-ACCGCTTTTCTTGA-TTCTACACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_ca6 CGGG-AACTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGTCAAAGAAAAAAGAACGGCGGCGAGG-GAAGAAGTCCTTCAGGGA-CCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAGCGGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCTGATCGTCGCTG-AAGCGCCTCGA-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--ACCCAA-GCCGCTTTTTCTAA-TTCTTCTCTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_d CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGGGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCAAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGC-CTGCGCGCCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCGT-ACCGCTTTTCTTGA-TTCTATACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_isolate_imp1 CGGG-AACTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG--AAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGGAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-GCCGCTTTTCTTGA-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGACTGGGTCCCT- Citrus_exocortis_viroid_isolate_imp2 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCCG------------ACCCTGCAGGCAGGAAAAGAAAAA-AAGAGGCGGCTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCGA-ACCGCTTTTCTTCT-ATCTTATCTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_imp3 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCCG------------ACCCTGCAGGCAGGAAAAGAAAAA-AAGAGGCGGCTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCGA-ACCGCTTTTCTTCT-ATCTTATCTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_soR2 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGCTCAAC-AGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCTTCGCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACCGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_soV1 CGGG-ATCTTTCTTGAGGTTCCCTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAAAAATCCTTCAGGGGATCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTGGG---GGGGACAGC-TGCTTCGGTCGCCGCGGATCACTTGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_soWn3 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_ver1 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCTGGG-GAAGAAGTCCTTCAGGGA-TCCCCGGTG-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTGT-ATCTTTGCTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_isolate_ver2 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAGA-AAAA-AAGAGGCGGCTGGG-GAAGAAGTCCTTCAGGGA-TCCCCGGAT-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGGACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTCT-ATCTTAGCTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid strain severe CEVd-HN' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- 'Citrus exocortis viroid strain severe CEVd-YN' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTAGAGGAAGTCGAGGTCGG-GGGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGAGTGGGTCCCT- Citrus_exocortis_viroid_variant_AD CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGCTCAAC-AGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCTTCGCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_variant_ADG CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGCTCAAC-AGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCTTCGCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_variant_BF CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAGAAAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_variant_E127 CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_variant_E55K CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_variant_FO CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAGAAAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGGACGAC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCGCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_variant_KA CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAGAAAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCAAC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGC-CTGCGCGCCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- Citrus_exocortis_viroid_variant_MA CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAGAAAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGTACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid, host=Vicia faba' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGGACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGACCAGCGG-AGAAACAGG-TGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGTCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCTGACTACCCGGTGGATAACAACTGATGGTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid, strain de26' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAAAG-AAAA-AGATGGCGGGTGGG-GAAGAAGTCCTTCAGGGA-TCGCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGAGCTTC-TGCCTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AGGCGTCGCCA-CCCCTCGCCCGG-AGCTTCTCTCTGGAT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCCCAGTACCGCTTTTCTTG--ATCTCTACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'Citrus exocortis viroid, strain yellow corky vein' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG----GGGAAACTGGAGGAAGTCGAGGTCGG--GGGGAACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCTCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCG-ACTACCCAATCCGAAACAACTGAAGCTTCAA--CCCCAA-ACCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'citrus exocortis viroid Gynura, CEVg' CGGG-AACTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAGAG--AAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG---GGGGACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGTTGCTGGCTTCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ATTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-GCCGCTTTTCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTCCCT- 'citrus exocortis viroid citron, CEVc' CGGG-ATCTTTCTTGAGGTTC-CTGT---GGTGCTCGCCTG------------ACCCTGCAGGCAGGAAAAG-AAAA-AAGAGGCGGCGGGG--AAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGATCAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--ACTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCACGC-CCCCTCGCCCGG-AGCTTCTCTCTGGCT-ACTACCCGGTGGAT-ACAACTGAAGCTTCAA--CCTCAA-ACCGCTTTTCTTGA-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTCGGAACCCTAGATTGGGTTCCT- 'citrus exocortis viroid tomato hybrid callus, CEVcls 370 ' CGGG-AACTTTCTTGAGGTTC-CTGT---GGTGCTCACCTG------------ACCCTGCAGGCAGAAAGAG--AAA-AAGAGGCGGCGGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG--GGGGGACAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATCGTCGCTG-AAGCGCCTCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAA-ACAACTGAAGCTTCAA--CCCCAA-GCCGCTTTTCTTAT-ATCTTCACTGCTCCCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- 'citrus exocortis viroid tomato hybrid, CEVt' CGGG-AACTTTCTTGAGGTCC-CTGT---GGTGCTCACCTG------------ACCCCGCAGGCAGAAAGAG-AAAG-AAGAGGCGGCTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGATCAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATTGTCGCTG-AAGCGCCTCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAA-ACAACTGAAGCTTCGA--CCCCAA-ACCGTTTTCCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- 'citrus exocortis viroid tomato, CEVt' CGGG-AACTTTCTTGAGGTCC-CTGT---GGTGCTCACCTG------------ACCCCGCAGGCAGAAAGAG-AAAG-AAGAGGCGGCTGGG-GAAGAAGTCCTTCAGGGA-TCCCCG--G-GGAAACCTGGAGGAAGTCGAGGTCGG-GGGGGATCAGC-TGCTTCGGTCGCCGCGGATCACTGGCGTCCAGCGG-AGAAACAGG-AGCTCG--TCTCCTTCCTTTCGCTGCTGGCTCCA-CA--TCCGATTGTCGCTG-AAGCGCCTCGC-CCCCTCGCCCGG-AGCTTCTCTCTGGAG-ACTACCCGGTGGAA-ACAACTGAAGCTTCGA--CCCCAA-ACCGTTTTCCTTAT-ATCTTCACTGCTCTCCGGGCGAGGGTG-AAAGCCCTTGGAACCCTAGATTGGGTCCCT- ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M15541] TITLE HSVd; LINK TAXA = Taxa2; DIMENSIONS NCHAR=346; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Citrus_cachexia_viroid CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG-AAAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGCAATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Citrus cachexia viroid isolate ISA 4-CT-I' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG--CCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GGGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Citrus cachexia viroid isolate X-701-1' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Citrus cachexia viroid isolate X-701-2' CTGGGGAATTCTCG-AGTTGCCGCAC-AGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Citrus cachexia viroid isolate X-701-3' CTGGGGAATTCTCG-AGTCGCCGCAC-AGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Citrus cachexia viroid isolate X-701-M' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GC-GTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTC----TTTACCTC-CT-TCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA--TTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Citrus cachexia viroid isolate X-704-1' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Citrus cachexia viroid isolate X-704-2' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCATGCAAAG--AAAAAACGAG-GCA-GGAAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCGTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Citrus cachexia viroid isolate X-704-3' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GAACCTCTCTTGAGCCCCT 'Citrus cachexia viroid isolate X-704-M' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCATGCAAAG--AAAAAACAAG-GCA-GGAAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCGTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Citrus cachexia viroid isolate X-707-1' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTG-CCTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Citrus cachexia viroid isolate X-707-2' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCCCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Citrus cachexia viroid isolate X-707-3' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAGGGCA--GGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCAACGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTCTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Citrus cachexia viroid isolate X-707-4' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCCCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Citrus cachexia viroid isolate X-707-M' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Citrus cachexia viroid isolate X-712-1' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Citrus cachexia viroid isolate X-712-2' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-AA-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GGGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Citrus cachexia viroid isolate X-712-3' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GGGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Citrus cachexia viroid isolate X-712-M' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Citrus cachexia viroid isolate X-715-1' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Citrus cachexia viroid isolate X-715-2' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCTAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Citrus cachexia viroid isolate X-715-M' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Citrus_gummy_bark_viroid_strain_cachexia CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCGTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Citrus_viroid_II CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG--CCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Citrus viroid II isolate CVd II HN-01' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCACG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAG--AAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Citrus viroid II isolate CVd II HN-02' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAAAAAAGAG-CCACG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTGG--AAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Citrus viroid II isolate CVd II HN-03' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCACG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTGG--AAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Citrus_viroid_IIa_sequence CTGGGGAATTCTCG-AGTTGCCGGAT-AGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGTAGGAGAG--GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTC-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCGACCTG-CTTTTTGTCTA-TCTAAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Citrus_viroid_IIb_Cachexia_sequence_302 CTGGGGAATTCTCG-AGTTGCCGGAT-AGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCGACCTG-CTTTTTGTCTA-TCTAAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Cucumber_pale_fruit_viroid_CPFV_301 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTAAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Cucumber_pale_fruit_viroid_CPFV_303 CTGGGGAATTCTCG-AGTTGCCGCACAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTAAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Dapple_peach_fruit_disease_viroid_from_peach_dapple_fruit CTGGGGAATTCTCG-AGTTGCCGGATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCCTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Dapple_plum_and_peach_fruit_disease_viroid_from_plum_and_peach_dapple_fruits CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Dapple_plum_and_peach_fruit_disease_viroid_isolate_FP1 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-AA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Dapple_plum_and_peach_fruit_disease_viroid_isolate_FP2 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCGTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Dapple_plum_and_peach_fruit_disease_viroid_isolate_FP3 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Genomic RNA of hop stunt viroid type HSV-c 303' CTGGGGAATTCTCG-AGTTGCCGCACAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTAAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Genomic RNA of hop stunt viroid type HSV-g 297' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Genomic_of_hop_stunt_viroid CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Grapevine_viroid_Hop_stunt_viroid_297 CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTG-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Grapevine viroid grapevine isolate SHV-gGV complete genome 296' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CT-GCTTCA-GAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_Stunt_Viroid_HSV_297 CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_Stunt_Viroid_HSVd_298 CTGGGGAATTCTCG-AGTTGCCGCATCAGGCATGCAAAG-AAAAAAACTTC-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTGTTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus complete sequence 303' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCGTGATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-A isolate 1' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG---------GAGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-A isolate 2' CTGGGGAATTCTTG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-A isolate 3' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG-----------GGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-A isolate 4' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCATGCAAAG-AAAAAAACAAG-GCA-GGAAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCGTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-A isolate 5' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-A isolate 6' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GGGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-B isolate 1' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAGCCCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-B isolate 2' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG------------GCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-B isolate 3' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCATGCAAAG--AAAAAACAAG-GCA-GGAAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG-----------GGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCGTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-B isolate 4' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-B isolate 5' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-B isolate 6' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAGCCCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-C isolate 1' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-C isolate 2' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCC-----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-C isolate 3' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGAGT-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-C isolate 4' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGAGT-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-C isolate 5' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-C isolate 6' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-D isolate 1' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-D isolate 2' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTTG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-D isolate 3' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG-----------GGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGGGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-D isolate 4' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-D isolate 5' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-D isolate 6' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGAGT-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-E isolate 1' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-E isolate 2' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-E isolate 3' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-E isolate 4' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-E isolate 5' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-E isolate 6' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGG-A--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-F isolate 1' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-F isolate 2' CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-F isolate 3' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-F isolate 4' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-F isolate 5' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCACCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-F isolate 6' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-G isolate 1' CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-G isolate 2' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-G isolate 3' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTGCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-G isolate 4' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG------------GCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTGCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-G isolate 5' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGACTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-G isolate 6' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-H isolate 1' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG--CCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTAAGCCCCT 'Hop stunt viroid - citrus strain CC-H isolate 2' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-H isolate 3' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCACCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-H isolate 4' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid - citrus strain CC-H isolate 5' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_German_grapevine_cultivar_Riesling_genome_298 CTGGGGAATTCTCG-AGTTGCCGCATAAGGCATGCAAAG-AAAAAAACTTG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTGTTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_HSV_Korean_strain_mRNA_for_viroid_297 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GAACCTCTCTTGAGCCCCT Hop_stunt_viroid_HSVd CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_HSVd_isolate_genome_from_grapefruit_299 CTGGGGAATTCTCG-AGTTGCCGCAC-AGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid RNA complete genome isolate hAIw36-5 296' CTGGGGAATTCTCG-AGTTGCCGCAC-AGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GTAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid RNA complete genome isolate hKF82-4 297' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCCTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCGCCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid citrus isolate HSV-cit variant 1 302' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTAAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid citrus isolate HSV-cit variant 2 302' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTAAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 10HSVd2-6' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 11HSVd2-5' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TC-TCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCCCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 11HSVd2-7' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 11R-HSVd' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAG-AAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGG----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCT-- 'Hop stunt viroid clone 15R-HSV' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAG-AAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGACGGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 16F-HSV' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAG-AAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCT-- 'Hop stunt viroid clone 17F-HSVd' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAG-AAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCT-- 'Hop stunt viroid clone 1R-HSVd' CTGGGGAATTCTCGTAGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAG-AAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-CCTGGCTCTTGC---T-GAGA-CGCCGACCGGTGGC-ATCACCTCTCGG---TTGCTCTTCCAACCTGCTTGTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 1aHSVd11-1' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 1aHSVd11-2' CTGGGGAATTCTCG-AGTTGCCGCAGAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 1aHSVd11-3' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 2hsvdh2-1' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTC-GAATCC-AGC---ACGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 2hsvdh2-2' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGA-TCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGACCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 2hsvdh2-3' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GAACCTCTCTTGAGCCCCT 'Hop stunt viroid clone 2hsvdh2-4' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 2hsvdh2-6' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCA-AATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 2hsvdh2-7' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCAAGCAAAG--AAGAAACAAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GAACCTCTCTTGAGCCCCT 'Hop stunt viroid clone 31HSVd2-1' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 31HSVd2-2' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GGGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 3HSVd2-11' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-TGGAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG--CTCCCAACCTG-CTTTTGTTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 3HSVd2-14' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GGGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 3HSVd2-3' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCCGAGCCTCTGCCGCG-GAACCTCTCTTGAGCCCCT 'Hop stunt viroid clone 3R-HSV' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAG-AAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 3hsvdh3-4' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GAACCTCTCTTGAGCCCCT 'Hop stunt viroid clone 3hsvdh3-5' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTC-GAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GAGCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 48HSVd2-12' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 4F-HSV' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAG-AAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-CCTGGCTCTTCGAG-T-GAGACCG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCT-- 'Hop stunt viroid clone 4HSVd2-2' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 4aHSVd11-2' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCGAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTTCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 4aHSVd11-5' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATAC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 4aHSVd11-6' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT--TTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 5 hsvdp11-1' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 5 hsvdp11-2' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 5F-HSV' CTGGGGAATTCTCG-AGTTGCCGCT--AGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAG-AAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTCCGTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCT-- 'Hop stunt viroid clone 5HSVd2-9' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 5aHSVd11-1' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 5aHSVd11-2' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 5hsvdh5-1' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAGAGCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTGCTTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 5hsvdh5-2' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCGAGCAAAG--AAAAAACAAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 5hsvdh5-3' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TTTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTCC---TTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 62HSVd2-4' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAAG-GT-GCTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGT-CCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-TGGAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG--CTCCCAACCTG-CTTTTGTTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 67HSVd 2-8' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAACCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 67HSVd2-1' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 67HSVd2-3' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--TTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 67HSVd2-6' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CAACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 6aHSVd11-1' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 6aHSVd11-2' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AGGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 6aHSVd11-4' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATTGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 6aHSVd11-5' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCCTCTTC---TTTACCTT-CT--TTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 7HSVd2-2' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone 7HSVd2-4' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCCGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_8153 CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTATTCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_8164 CTGGGGAATTCTCG-AGTTGCCGCATAAGGCATGCAAAG--AAAAAACAAG-GCA-GGAAGG-AG-ACTTACCTGAG-AAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTGCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCGTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone A2-2-1' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone A2-2-5' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-AGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACGCCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone A35-2-1' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone A35-2-3' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCGTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGACCCCCT 'Hop stunt viroid clone A35-2-4' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CAACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone A35-2-5' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_B1B CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_B6B CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_BA1B CTGGGGAATTCTCG-AGTTGCCGCAACAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-AA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTGGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-TCTGGCTCTTCTCG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_BA4A_and_BA7B CTGGGGAATTCTCG-AGTTGCCGCAACAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-AA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-TCTGGCTCTTCTCG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_Demetra CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCGGGGCAACCCGGGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTTCCT-TCTGGCTCTTCGTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_HSVd CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAAG-GT-GCTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-TGGAGA-CG-CGACCGGTGGT-ATCACCTCTCGG--TTCG-CTACCCAACCTG-CTTTTGTTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_HSVd_2 CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_HSVd1 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GGGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_HSVd12 CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAGGGCA--GGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_HSVd2 CTGGGGAATTCTCG-AGTTGCCGCATAAGGCATGCAAAG-AAAAAAACTTG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTGTTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_HSVd22 CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_HSVd3 CTGGGGAATTCTCG-AGTTGCCGCATAAGGCATGCAAAG-AAAAAAACTTG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTGTTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone He HSVd2-1' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone He HSVd2-2' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone He HSVd2-6' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCACG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_JC1_and_JC5 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_JJ1_and_JJ4 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_JJ3 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_Jena CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCGGGGCAACCCGGGGCA--AC-TCTTCTTAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTCCCC-TCTGGCTCTTCGTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone Jx-C1-1' CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_Konstantinos CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCGGGGCAACCCGGGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTTCCT-TCTGGCTCTTCGTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTTTCTTGAGCCCCT 'Hop stunt viroid clone L5HSVdP11-1' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone L5HSVdP11-10' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_PR1A TTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_PR1B CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCCCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_PR2A CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAGAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGTGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_Paiko CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG--AAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCGGGGCAACCCGGGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGATA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTTCCT-TCTGGCTCTTCGTG---GAGA-CG-CGTCCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_Pinovo CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCGGGGCAACCCGGGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTTCCT-TCTGGCTCTTCGTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone Tu HSVd 1-13' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone Tu HSVd 1-16' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAGAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone Tu HSVd 2-7' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_Voras CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCGGGGCAAG---GGGCA--A--TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTTCCT-TCTGGCTCTTCGTG---GAGA-CG-CGACCGGTGGC-ACCCTTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone X5HSVd11-1' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTCG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone X5HSVd11-2' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone X5HSVd11-4' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_alm1261 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_alm426 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_cl2 CTGGGGAATTCTCGTAGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAG-AAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-CCTGGCTCTTGC---T-GAGA-CGCCGACCGGTGGC-ATCACCTCTCGG---TTGCTCTTCCAACCTGCTTGTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_cl3 CTGGGGAATTCTCG-AGTTGCCGCT--AGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAG-AAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTCCGTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCT-- Hop_stunt_viroid_clone_cl4 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAG-AAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-CCTGGCTCTTCGAG-T-GAGACCG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCT-- Hop_stunt_viroid_clone_hsvd_J1 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_hsvd_J10 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTCGAGCCCCT Hop_stunt_viroid_clone_hsvd_J11 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CCTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_hsvd_J12 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGGGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_hsvd_J13 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_hsvd_J2 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_hsvd_J3 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_hsvd_J4 CTGGGGAATTCTCG-AGTTGCCGCAAAGGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_hsvd_J5 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGGGCCCCT Hop_stunt_viroid_clone_hsvd_J6 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAGCTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_hsvd_J7 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CC-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_hsvd_J8 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-GAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_clone_hsvd_J9 CTGGGGAATTCTCG-AGTTGCTGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone lz16 hsvdp11-1' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAGAAAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCCCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone lz16 hsvdp11-6' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone lz16 hsvdp11-7' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone lz16 hsvdp11-8' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATTCCAGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone lz16 hsvdp11-9' CTGGGGAATTCTCG-AGTCGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AGACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone lz21 hsvdp11-14' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone lz21 hsvdp11-24' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--CTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone lz21 hsvdp11-6' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone lz21 hsvdp11-7' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGCGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GGGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone lz21 hsvdp11-9' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGACCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone lz6 hsvdp11-5' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGATGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone lz6 hsvdp11-6' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCAT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone lz6 hsvdp11-8' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone lz6 hsvdp11-9' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAA-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TCCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone t19HSVd11-5' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG--AAAAAATTAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCACG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone t19HSVd11-6' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone t42HSVd11-5' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTGG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTTGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone t48HSVd11-1' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone t48HSVd11-2' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCTCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCTCCT 'Hop stunt viroid clone t48HSVd11-4' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTCGAGCCCCT 'Hop stunt viroid clone tz18HSVd11-1' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCCCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone tz18HSVd11-3' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCCCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone tz6HSVd11-4' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone tz6HSVd11-5' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CCCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone xz17 hsvdp11-2' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCCA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clone xz17 hsvdp11-3' CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---AAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clonechi100Y-02-4-2 296' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGT---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clonechi100Y-02-4-4 296' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clonechi100Y-02-4-5 297' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clonechi100Y-03-2-6 296' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGGTA---CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGT---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clonechi100Y-03-2-7 300' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid clonechi100Y-03-2-8 296' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGT---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_grapevine_variant_IIa_sequence CTGGGGAATTCTCG-AGTTGCCGCATAAGGCATGCAAAG-AAAAAAACTTG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCAT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTGTTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_grapevine_variant_Ia_sequence CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGACGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_grapevine_variant_Ib_sequence CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG---AAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG---CTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_grapevine_variant_Ic_sequence CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGACGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGAC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_grapevine_variant_Id_sequence CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCGAAAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_grapevine_variant_Ie_sequence CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTTTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate 09-2009-2140hs' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate 09-2009-854' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCATGCAAAG-AAAAAAACTTG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTGTTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate 26X-l11m' CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTAGCTCCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate 26X-l12' CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTAGCTCCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate 26X-l33' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate 26x-c11' CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAGGGCA--GGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGGGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate 26x-c33' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGTGGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TCTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate 26x-l22m' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate 26x-l28' CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAGGGCA--GGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GCAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCCCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate 26x-l4' CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGC---AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_391a CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCGGGGCAACCCGGGGCA--AC-TCTTCTCAGAATCC-AGC----CGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_570 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCGGGGCAACCCGGGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTTCCT-TCTGGCTCTTCGTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_580 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCGGGGCAAC---GGGGA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-TCTGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTTCCT-TCTGGCTCTTCGTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_676 CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG--T-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCACGAC-TCTTCTCAGAATCCATACCTAGAGAGGTGC-GCA-----CGGCG-GAGGTGCTCTGGA-TACAAGCT-CTGCCTTCG-AAACACCATCGATCGTGCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate Aridaia-570' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG-GGGCACCCGGGGCA--AC-TCTTCTCAGAATCC-AGC----CGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_CA909 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_CQ_clone_1 CTGGGGGATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_CQ_clone_2 CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCGTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGACCCCCT Hop_stunt_viroid_isolate_CQ_clone_3 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate CVd-IIa 117' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate CVd-IIa or E819' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate CVd-IIb or Ca902' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCGTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate CVd-IIc or Ca905' CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_CVdIIA_10uy CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_CVdIIA_11uy CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGAC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_CVdIIa_17uy CTGGGGAATTCTCG-AGTTGCCGGGT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate CVdIIa 205-2-1' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate CVdIIa 205-2-4' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG---AAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate CVdIIa 54-2-1' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate CVdIIa 54-2-2' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGTGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCCCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_Ca903 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate GZ-1' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_H1 CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HCSC01 CTGGGGAATTCTCA-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGATAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTGTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HCSC08 CTGGGGAATTCTCG-AGTTGCCGCATAAGGCATGCAAAG--AAAAAACAAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HCSC10 CTGGGGAATTCTCA-AGTTGCCGCATCGGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-AT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HNiagD08 CTGGGGAATTCTCG-AGTTGCCGCATCCGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCG-GCGGTGGTGCGGACTAGAGGCT-CTGCAGTGC-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGATCTTCCGA-C-GAGA-CG-TGACCGGTGGA-GTGAAGTTTCGG--TTCA---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCATGTGCAGCG-GATCCTGTCTTGAGCCCCT Hop_stunt_viroid_isolate_HSVd CTGGGGAATTCTCG-AGTTGCCGCACTAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCCCGGC-----GAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCCTGGTG---GAGA-CG-CGACCGGTGGC-ACCCC--CTCGG--TTCG---TCCCAACCTG-CTTTTGTTCTA-TCTAAGCCTCTGCCGCG-GACCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate HSVd-IIa 815-11' CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-TCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTATTCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate HSVd-IIa 815-3an' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-TCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCGTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate HSVd-IIa 816-8' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCATGCAAAG--AAAAAACAAG-GCA-GGAAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTGCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCGTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate HSVd-IIa 817' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCATGCAAAG--AAAAAACAAG-GCA-GGAAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTGCTTC--TTTTACCTT-CT-TCCGGCTCTTCTGT-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCGTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate HSVd-IIb 814-1' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GGGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate HSVd-IIc 816-7' CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG-AAAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTATTCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate HSVd-gb' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AA-ACTTACCTGAAAAAGGAG-CCCCG------------GAA--AC-TTTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTGCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HSVd10 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----CGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTTCA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HSVd11 CTGGGGAATTCTCG-AGTTGCCGCACCAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----CGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTGTTCTA-TCTAAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HSVd12 CTGGGGAATTCTCG-AGTTGCCGCACCAGGCATGCAAAG-AAAAAAACTAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----CGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGT-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTGTTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HSVd13 CTGGGGAATTCTCG-AGTTGCCGCACCAGGCATGCAAAG-AAAAAAACTAG-ACA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----CGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTGTTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HSVd14 CTGGGGAATTCTCG-AGTCGCCGCACCAGGCATGCAAAG-AAAAAAACTAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----CGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTGTTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HSVd15 CTGGGGAATTCTCG-AGTTGCCGCACCAGGCATGCAAAG-AAAAAAACTAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----CGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTGTTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HSVd16 CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC-----GAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HSVd17 CTGGGGAATTCTCG-AGTTGCCGCAACAGGCATGCAAAG-AAAAAAACTAG-CCA-GGGAGG-AA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCA-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-TCTGGCTCTTCTCG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HSVd2 CTGGGGAATTCTCG-AGTTGCCGCAGAAGGCAAGCAAAG-AAAAAAACAAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----CGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTTAA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HSVd22 CTGGGGAATTCTCG-AGTTGCCGCAACAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-AA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-TCTGGCTCTTCTCG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TCCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HSVd3 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG--AAAAAACAAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTTCA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HSVd32 CTGGGGAATTCTCG-AGTTGCCGCAACAGGCATGCAAAG-AAAAAAACTAT-GCA-GGGAGG-AA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-TCTGGCTCTTCTCG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HSVd4 CTGGGGAATTCTCG-AGTTGCCGCAGAAGGCAAGCAAAG-AAAAAAACTAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCCAGGC-----GAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HSVd42 CTGGGGAATTCTCG-AGTTGCCGCAACAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-AA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGTC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-TCTGGCTCTTCTCG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HSVd5 CTGGGGAATTCTCG-AGTTGCCGCACCAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC-----GAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTGTTCTA-TCTAAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HSVd52 CTGGGGAATTCTCG-AGTTGCCGCAACAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-AA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCCAAGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-TCTGGCTCTTCTCG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HSVd6 CTGGGGAATTCTCG-AGTTGCCGCACCAGGCATGCAAAG-AAAAAAACTAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----CGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAGCCTG-CTTTTGTTCTA-TCTTAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HSVd62 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CT--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTTCCT-TCTGGCTCTTCGTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TGTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HSVd7 CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----CGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HSVd72 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTTCCT-TCTGGCTCTTCGTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TGTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HSVd8 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTTCCT-TCTGGCTCTTCGGG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HSVd9 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-CG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTTCCT-TCTGGCTCTTCGTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_HSVdE117 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG--ATTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_IIaI14 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_IIaI22 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCCA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_IIaI3 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_IIaI4 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_IIaS1S3 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_IIaS1S3_HSVd CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_IIaS4 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTGCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_IIbI1 CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAGGGCA--GGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGGGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCCTAGGTTTCG----TCAAACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_IIbI13 CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---TGGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TCTACCTC-CTGCCTGGCTCTTCGAG-C-AAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCGTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_IIbI2_ CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG--CTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_IIbS2 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GGGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_IIcI4 CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_IIcI914 CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_IIcS1 CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTAAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate ISA 5-CT-I' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG--CCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate ISA 6-SR-I' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG--CCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate ISA 7-RC-I' CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG--CCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_Jabong CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate Kernitsa-327' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAAAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCCAGCGGTGCTCTGGAATACAGGCT-CT-GCTTTG-GACCACAATCTTTCGTCCCTTCTTC---TTTACCTT-CT-ACTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_LMSX2 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_Mor17 CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGGGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_Mor24 CCGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCCGT-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_Mor4 CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGGGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_Mor61 CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGGGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_Mor9 CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGGGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate PM-26X clone 26x-p26' CTGGGGAATTCTCG-AGTTGCCGCAT-CGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate PM-26X clone 26x-p3' CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAGGGCA--GGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GAAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAAA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate PM-26X clone 26x-p35' CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate PM-26X clone 26x-p44' CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCT--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate PM-26x clone 26x-c13' CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTAGCTTCG-AAACACCATCGATCGTCCCTTCTCC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate PM-26x clone 26x-c18' CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAGGGCA--GGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCACAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTACAGGCT-CTAGCTTCA-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTG-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate PM-26x clone 26x-c19' CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG---TCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate PM-26x clone 26x-c2' CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate PM-26x clone 26x-c22' CTGGGGAATCCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate PM-26x clone 26x-c23' CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGGCCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate PM-26x clone 26x-c26' CTGGGGAATACTCG-AGTTGCCGCAT-ATGCAAGCAAAG--AAAAAACAAGGGCA--GGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGCGCTCTGGAGTAGGGGCT-CTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TGTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--ATCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate PM-26x clone 26x-c29' CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGCCC-GCGGTGCTCTGGAGTAGAGGCT-CTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate PM-26x clone 26x-c45' CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAGGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_Roma1 CTGGGGAATTCTCG-AGTTGCCGCAACAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-AA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTCTTTTACCTT---CT-TCTGGCTCTTCTCG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_Rouge_de_Rousillon_D08 CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAG-AAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----CGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_SC_clone_1 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGACCCCCT Hop_stunt_viroid_isolate_SC_clone_2 CTGGGGAATCCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_SC_clone_3 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAGAAAAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TC-TCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_Tahiti_lime_1 CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCGTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_Tahiti_lime_11 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_Tahiti_lime_2 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_Tahiti_lime_3 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_Tahiti_lime_4 CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCT-TTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_Tahiti_lime_5 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_Tahiti_lime_6 CTGGGGAATTCTCG-AGTTGCCGCATAAGGCATGCAAAG--AAAAAACAAG-GCA-GGAAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCGTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_Tahiti_lime_7 CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_Tahiti_lime_8 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_Thailand CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--ACTTCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_UMCX1 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_Whang CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCGTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_apricot_Ring_Pox CTGGGGAATTCTCG-AGTTGCCGCACCAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----CGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTGGTCTA-TCTTAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate cl-c19' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGAAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCCCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate cl-c25' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG---AAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAACCCCT 'Hop stunt viroid isolate cl-c3' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate cl-c37' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG---AAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid isolate cl-c51' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_dapple_plum_fruit CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG-AAAAAAACTAG-GCA-GGGAGG-AA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-TCTGGCTCTTCTCG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_e CTGGGGAATTCTCG-AGTTGCCGCAC-AGGCAAGCAAAG--AAAAAAAAAG-GGA-GGGAGA-AGAACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTTCAAAACACCATCAATCGTCCCTTCTTC---TTCCCTTT-CA-ACGGGTTCTTCGGT-T-GAAA-CC-CAACCGGGGGC-TCCCCCTCTCGG--TTCC--TCCCCAACCGG-TTTTTTGCCTT-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_f CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG-AAAAAAACAAG-GCAGGAGAGG-AA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CC-TCTGGTTCTTCTGT-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---CTCCAACCTG-CTTTTTGTCTATTCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_hAIw36 CTGGGGAATTCTCG-AGTTGCCGCAC-AGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_hAIw5 CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GAACCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_hFK82 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GAACCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_hKFKi CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GAACCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_hKIw CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GAACCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_hSIw CTGGGGAATTCTCG-AGTTGCCGCACTAGGCATGCAAAG--AAAAAACAAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTTAGCCTCTGCCGCG-GAACCTCTCTTGAGCCCCT 'Hop stunt viroid isolate sh-ay-01' CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-TGGAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_soR2 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_soV1 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCAGGGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_isolate_soWn3 CTGGGGAATTCTCG-AGTTGCCGCATGGGCAAAGCAAAG--AAAAAACAAG-GCACGGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AAC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_sequence_almond_isolate_HSVd CTGGGGAATTCTCG-AGTTGCCGCAAGAGGCATGCAAAG--AAAAAACTAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_sequence_almond_isolate_HSVd2 CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCATGCAAAG--AAAAAACTAG-GCA-GGGAGG-TG--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCTTG---GAGA-CG-CGACCGGTGGC-ACCCCTGCTCGG--TTCG---CTCCAACCTG-CTTTTGTTCTA-TCTGCGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_strain_citrus_yellow_corky_vein_viroid_A CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_strain_split_bark CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG-AAAAAAACAAG-GCA-GGAGAG-GA-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-ACTGGCTCTTCTGT-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG--CTCCAAACCTG-CTTTTTGTCTATTCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_strain_yellow_corky_vein CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_strain_yellow_corky_vein2 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-TCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid variant 10SA1-IW1 302' CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG---AAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT 'Hop stunt viroid variant 10SA1-IW2 301' CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG---AAAAACAAG-GCA-GGAAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-GAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_variant_AB2 CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_variant_AD1 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_variant_AD2 CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_variant_BF CTGGGGAATTCTCG-AGTTGCCGCATTAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_variant_E120P8 CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCATCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_variant_E127 CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCGTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_variant_E180 CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG---AAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T--AGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCGTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_variant_EX1 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GGGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_variant_FA CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCGACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_variant_FO CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCT-GCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_variant_KS14 CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCAACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_variant_MA CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_variant_MK CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG---AAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid_variant_WP CTGGGGAATTCTCG-AGTTGCCGCAAAAGGCAGGCAAAG--AAAAAACAAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT---GCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GAACCTCTCTTGAGCCCCT Hop_stunt_viroid_variant_WS1 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCGAG-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCC- Hop_stunt_viroid_variant_WS2 CTGGGGAATTCTCG-AGTTGCCGCATAAGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCCTAGGTTTCG----TCAAACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroid2 CTGGGGAATTCTCG-AGTTGCCGCAT-GGGCAAGCAAAG--AAAAAACAAG-GCA-GGGAGG-AG-ACTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGTAGGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCG-AAACACCATCGATCGTCCCTTCTTC--TTTTACCTT-CT-CCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG-TCTTCCAACCTG-CTTTTTGTCTA-TCTAAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT Hop_stunt_viroidHSV_sequence_297 CTGGGGAATTCTCG-AGTTGCCGCATCAGGCAAGCAAAG--AAAAAACAAG-GCA-GGAAGG-TA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC---GAGAGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCT-CTGCCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTT-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG---TCCCAACCTG-CTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT hop_stunt_viroid_isolate_IIsc2 CTGGGGAATTCTCG-AGTTGCCGCAT-AGGCAAGCAAAG--AAAAAACAAG-GGC-AGGAGA-GA--CTTACCTGAGAAAGGAG-CCCCG----------GGGCA--AC-TCTTCTCAGAATCC-AGC----GGGGGCGT-GGAGAGA-GGGCC-GCGGTGCTCTGGAGTAGAGGCTTCTAGCTTCG-AAACACCATCGATCGTCCCTTCTTC---TTTACCTC-CT-TCTGGCTCTTCCGA-T-GAGA-CG-CGACCGGTGGC-ATCACCTCTCGG--TTCG----TCCGACCTGCCTTTTTGTCTA-TCTGAGCCTCTGCCGCG-GATCCTCTCTTGAGCCCCT ; END; BEGIN TREES; TITLE HSVd; LINK TAXA = Taxa2; TRANSLATE 1 Citrus_cachexia_viroid, 2 'Citrus cachexia viroid isolate ISA 4-CT-I', 3 'Citrus cachexia viroid isolate X-701-1', 4 'Citrus cachexia viroid isolate X-701-2', 5 'Citrus cachexia viroid isolate X-701-3', 6 'Citrus cachexia viroid isolate X-701-M', 7 'Citrus cachexia viroid isolate X-704-1', 8 'Citrus cachexia viroid isolate X-704-2', 9 'Citrus cachexia viroid isolate X-704-3', 10 'Citrus cachexia viroid isolate X-704-M', 11 'Citrus cachexia viroid isolate X-707-1', 12 'Citrus cachexia viroid isolate X-707-2', 13 'Citrus cachexia viroid isolate X-707-3', 14 'Citrus cachexia viroid isolate X-707-4', 15 'Citrus cachexia viroid isolate X-707-M', 16 'Citrus cachexia viroid isolate X-712-1', 17 'Citrus cachexia viroid isolate X-712-2', 18 'Citrus cachexia viroid isolate X-712-3', 19 'Citrus cachexia viroid isolate X-712-M', 20 'Citrus cachexia viroid isolate X-715-1', 21 'Citrus cachexia viroid isolate X-715-2', 22 'Citrus cachexia viroid isolate X-715-M', 23 Citrus_gummy_bark_viroid_strain_cachexia, 24 Citrus_viroid_II, 25 Citrus_viroid_IIa_sequence, 26 Citrus_viroid_IIb_Cachexia_sequence_302, 27 'Citrus viroid II isolate CVd II HN-01', 28 'Citrus viroid II isolate CVd II HN-02', 29 'Citrus viroid II isolate CVd II HN-03', 30 Cucumber_pale_fruit_viroid_CPFV_301, 31 Cucumber_pale_fruit_viroid_CPFV_303, 32 Dapple_peach_fruit_disease_viroid_from_peach_dapple_fruit, 33 Dapple_plum_and_peach_fruit_disease_viroid_from_plum_and_peach_dapple_fruits, 34 Dapple_plum_and_peach_fruit_disease_viroid_isolate_FP1, 35 Dapple_plum_and_peach_fruit_disease_viroid_isolate_FP2, 36 Dapple_plum_and_peach_fruit_disease_viroid_isolate_FP3, 37 Genomic_of_hop_stunt_viroid, 38 'Genomic RNA of hop stunt viroid type HSV-c 303', 39 'Genomic RNA of hop stunt viroid type HSV-g 297', 40 'Grapevine viroid grapevine isolate SHV-gGV complete genome 296', 41 Grapevine_viroid_Hop_stunt_viroid_297, 42 Hop_stunt_viroid, 43 Hop_stunt_viroid2, 44 'Hop stunt viroid - citrus complete sequence 303', 45 'Hop stunt viroid citrus isolate HSV-cit variant 1 302', 46 'Hop stunt viroid citrus isolate HSV-cit variant 2 302', 47 'Hop stunt viroid - citrus strain CC-A isolate 1', 48 'Hop stunt viroid - citrus strain CC-A isolate 2', 49 'Hop stunt viroid - citrus strain CC-A isolate 3', 50 'Hop stunt viroid - citrus strain CC-A isolate 4', 51 'Hop stunt viroid - citrus strain CC-A isolate 5', 52 'Hop stunt viroid - citrus strain CC-A isolate 6', 53 'Hop stunt viroid - citrus strain CC-B isolate 1', 54 'Hop stunt viroid - citrus strain CC-B isolate 2', 55 'Hop stunt viroid - citrus strain CC-B isolate 3', 56 'Hop stunt viroid - citrus strain CC-B isolate 4', 57 'Hop stunt viroid - citrus strain CC-B isolate 5', 58 'Hop stunt viroid - citrus strain CC-B isolate 6', 59 'Hop stunt viroid - citrus strain CC-C isolate 1', 60 'Hop stunt viroid - citrus strain CC-C isolate 2', 61 'Hop stunt viroid - citrus strain CC-C isolate 3', 62 'Hop stunt viroid - citrus strain CC-C isolate 4', 63 'Hop stunt viroid - citrus strain CC-C isolate 5', 64 'Hop stunt viroid - citrus strain CC-C isolate 6', 65 'Hop stunt viroid - citrus strain CC-D isolate 1', 66 'Hop stunt viroid - citrus strain CC-D isolate 2', 67 'Hop stunt viroid - citrus strain CC-D isolate 3', 68 'Hop stunt viroid - citrus strain CC-D isolate 4', 69 'Hop stunt viroid - citrus strain CC-D isolate 5', 70 'Hop stunt viroid - citrus strain CC-D isolate 6', 71 'Hop stunt viroid - citrus strain CC-E isolate 1', 72 'Hop stunt viroid - citrus strain CC-E isolate 2', 73 'Hop stunt viroid - citrus strain CC-E isolate 3', 74 'Hop stunt viroid - citrus strain CC-E isolate 4', 75 'Hop stunt viroid - citrus strain CC-E isolate 5', 76 'Hop stunt viroid - citrus strain CC-E isolate 6', 77 'Hop stunt viroid - citrus strain CC-F isolate 1', 78 'Hop stunt viroid - citrus strain CC-F isolate 2', 79 'Hop stunt viroid - citrus strain CC-F isolate 3', 80 'Hop stunt viroid - citrus strain CC-F isolate 4', 81 'Hop stunt viroid - citrus strain CC-F isolate 5', 82 'Hop stunt viroid - citrus strain CC-F isolate 6', 83 'Hop stunt viroid - citrus strain CC-G isolate 1', 84 'Hop stunt viroid - citrus strain CC-G isolate 2', 85 'Hop stunt viroid - citrus strain CC-G isolate 3', 86 'Hop stunt viroid - citrus strain CC-G isolate 4', 87 'Hop stunt viroid - citrus strain CC-G isolate 5', 88 'Hop stunt viroid - citrus strain CC-G isolate 6', 89 'Hop stunt viroid - citrus strain CC-H isolate 1', 90 'Hop stunt viroid - citrus strain CC-H isolate 2', 91 'Hop stunt viroid - citrus strain CC-H isolate 3', 92 'Hop stunt viroid - citrus strain CC-H isolate 4', 93 'Hop stunt viroid - citrus strain CC-H isolate 5', 94 'Hop stunt viroid clone 10HSVd2-6', 95 'Hop stunt viroid clone 11HSVd2-5', 96 'Hop stunt viroid clone 11HSVd2-7', 97 'Hop stunt viroid clone 11R-HSVd', 98 'Hop stunt viroid clone 15R-HSV', 99 'Hop stunt viroid clone 16F-HSV', 100 'Hop stunt viroid clone 17F-HSVd', 101 'Hop stunt viroid clone 1aHSVd11-1', 102 'Hop stunt viroid clone 1aHSVd11-2', 103 'Hop stunt viroid clone 1aHSVd11-3', 104 'Hop stunt viroid clone 1R-HSVd', 105 'Hop stunt viroid clone 2hsvdh2-1', 106 'Hop stunt viroid clone 2hsvdh2-2', 107 'Hop stunt viroid clone 2hsvdh2-3', 108 'Hop stunt viroid clone 2hsvdh2-4', 109 'Hop stunt viroid clone 2hsvdh2-6', 110 'Hop stunt viroid clone 2hsvdh2-7', 111 'Hop stunt viroid clone 31HSVd2-1', 112 'Hop stunt viroid clone 31HSVd2-2', 113 'Hop stunt viroid clone 3HSVd2-11', 114 'Hop stunt viroid clone 3HSVd2-14', 115 'Hop stunt viroid clone 3HSVd2-3', 116 'Hop stunt viroid clone 3hsvdh3-4', 117 'Hop stunt viroid clone 3hsvdh3-5', 118 'Hop stunt viroid clone 3R-HSV', 119 'Hop stunt viroid clone 48HSVd2-12', 120 'Hop stunt viroid clone 4aHSVd11-2', 121 'Hop stunt viroid clone 4aHSVd11-5', 122 'Hop stunt viroid clone 4aHSVd11-6', 123 'Hop stunt viroid clone 4F-HSV', 124 'Hop stunt viroid clone 4HSVd2-2', 125 'Hop stunt viroid clone 5aHSVd11-1', 126 'Hop stunt viroid clone 5aHSVd11-2', 127 'Hop stunt viroid clone 5F-HSV', 128 'Hop stunt viroid clone 5HSVd2-9', 129 'Hop stunt viroid clone 5hsvdh5-1', 130 'Hop stunt viroid clone 5hsvdh5-2', 131 'Hop stunt viroid clone 5hsvdh5-3', 132 'Hop stunt viroid clone 5 hsvdp11-1', 133 'Hop stunt viroid clone 5 hsvdp11-2', 134 'Hop stunt viroid clone 62HSVd2-4', 135 'Hop stunt viroid clone 67HSVd2-1', 136 'Hop stunt viroid clone 67HSVd2-3', 137 'Hop stunt viroid clone 67HSVd2-6', 138 'Hop stunt viroid clone 67HSVd 2-8', 139 'Hop stunt viroid clone 6aHSVd11-1', 140 'Hop stunt viroid clone 6aHSVd11-2', 141 'Hop stunt viroid clone 6aHSVd11-4', 142 'Hop stunt viroid clone 6aHSVd11-5', 143 'Hop stunt viroid clone 7HSVd2-2', 144 'Hop stunt viroid clone 7HSVd2-4', 145 Hop_stunt_viroid_clone_8153, 146 Hop_stunt_viroid_clone_8164, 147 'Hop stunt viroid clone A2-2-1', 148 'Hop stunt viroid clone A2-2-5', 149 'Hop stunt viroid clone A35-2-1', 150 'Hop stunt viroid clone A35-2-3', 151 'Hop stunt viroid clone A35-2-4', 152 'Hop stunt viroid clone A35-2-5', 153 Hop_stunt_viroid_clone_alm1261, 154 Hop_stunt_viroid_clone_alm426, 155 Hop_stunt_viroid_clone_B1B, 156 Hop_stunt_viroid_clone_B6B, 157 Hop_stunt_viroid_clone_BA1B, 158 Hop_stunt_viroid_clone_BA4A_and_BA7B, 159 'Hop stunt viroid clonechi100Y-02-4-2 296', 160 'Hop stunt viroid clonechi100Y-02-4-4 296', 161 'Hop stunt viroid clonechi100Y-02-4-5 297', 162 'Hop stunt viroid clonechi100Y-03-2-6 296', 163 'Hop stunt viroid clonechi100Y-03-2-7 300', 164 'Hop stunt viroid clonechi100Y-03-2-8 296', 165 Hop_stunt_viroid_clone_cl2, 166 Hop_stunt_viroid_clone_cl3, 167 Hop_stunt_viroid_clone_cl4, 168 Hop_stunt_viroid_clone_Demetra, 169 'Hop stunt viroid clone He HSVd2-1', 170 'Hop stunt viroid clone He HSVd2-2', 171 'Hop stunt viroid clone He HSVd2-6', 172 Hop_stunt_viroid_clone_HSVd, 173 Hop_stunt_viroid_clone_HSVd1, 174 Hop_stunt_viroid_clone_HSVd12, 175 Hop_stunt_viroid_clone_HSVd2, 176 Hop_stunt_viroid_clone_HSVd_2, 177 Hop_stunt_viroid_clone_HSVd22, 178 Hop_stunt_viroid_clone_HSVd3, 179 Hop_stunt_viroid_clone_hsvd_J1, 180 Hop_stunt_viroid_clone_hsvd_J10, 181 Hop_stunt_viroid_clone_hsvd_J11, 182 Hop_stunt_viroid_clone_hsvd_J12, 183 Hop_stunt_viroid_clone_hsvd_J13, 184 Hop_stunt_viroid_clone_hsvd_J2, 185 Hop_stunt_viroid_clone_hsvd_J3, 186 Hop_stunt_viroid_clone_hsvd_J4, 187 Hop_stunt_viroid_clone_hsvd_J5, 188 Hop_stunt_viroid_clone_hsvd_J6, 189 Hop_stunt_viroid_clone_hsvd_J7, 190 Hop_stunt_viroid_clone_hsvd_J8, 191 Hop_stunt_viroid_clone_hsvd_J9, 192 Hop_stunt_viroid_clone_JC1_and_JC5, 193 Hop_stunt_viroid_clone_Jena, 194 Hop_stunt_viroid_clone_JJ1_and_JJ4, 195 Hop_stunt_viroid_clone_JJ3, 196 'Hop stunt viroid clone Jx-C1-1', 197 Hop_stunt_viroid_clone_Konstantinos, 198 'Hop stunt viroid clone L5HSVdP11-1', 199 'Hop stunt viroid clone L5HSVdP11-10', 200 'Hop stunt viroid clone lz16 hsvdp11-1', 201 'Hop stunt viroid clone lz16 hsvdp11-6', 202 'Hop stunt viroid clone lz16 hsvdp11-7', 203 'Hop stunt viroid clone lz16 hsvdp11-8', 204 'Hop stunt viroid clone lz16 hsvdp11-9', 205 'Hop stunt viroid clone lz21 hsvdp11-14', 206 'Hop stunt viroid clone lz21 hsvdp11-24', 207 'Hop stunt viroid clone lz21 hsvdp11-6', 208 'Hop stunt viroid clone lz21 hsvdp11-7', 209 'Hop stunt viroid clone lz21 hsvdp11-9', 210 'Hop stunt viroid clone lz6 hsvdp11-5', 211 'Hop stunt viroid clone lz6 hsvdp11-6', 212 'Hop stunt viroid clone lz6 hsvdp11-8', 213 'Hop stunt viroid clone lz6 hsvdp11-9', 214 Hop_stunt_viroid_clone_Paiko, 215 Hop_stunt_viroid_clone_Pinovo, 216 Hop_stunt_viroid_clone_PR1A, 217 Hop_stunt_viroid_clone_PR1B, 218 Hop_stunt_viroid_clone_PR2A, 219 'Hop stunt viroid clone t19HSVd11-5', 220 'Hop stunt viroid clone t19HSVd11-6', 221 'Hop stunt viroid clone t42HSVd11-5', 222 'Hop stunt viroid clone t48HSVd11-1', 223 'Hop stunt viroid clone t48HSVd11-2', 224 'Hop stunt viroid clone t48HSVd11-4', 225 'Hop stunt viroid clone Tu HSVd 1-13', 226 'Hop stunt viroid clone Tu HSVd 1-16', 227 'Hop stunt viroid clone Tu HSVd 2-7', 228 'Hop stunt viroid clone tz18HSVd11-1', 229 'Hop stunt viroid clone tz18HSVd11-3', 230 'Hop stunt viroid clone tz6HSVd11-4', 231 'Hop stunt viroid clone tz6HSVd11-5', 232 Hop_stunt_viroid_clone_Voras, 233 'Hop stunt viroid clone X5HSVd11-1', 234 'Hop stunt viroid clone X5HSVd11-2', 235 'Hop stunt viroid clone X5HSVd11-4', 236 'Hop stunt viroid clone xz17 hsvdp11-2', 237 'Hop stunt viroid clone xz17 hsvdp11-3', 238 Hop_stunt_viroid_German_grapevine_cultivar_Riesling_genome_298, 239 Hop_stunt_viroid_grapevine_variant_Ia_sequence, 240 Hop_stunt_viroid_grapevine_variant_Ib_sequence, 241 Hop_stunt_viroid_grapevine_variant_Ic_sequence, 242 Hop_stunt_viroid_grapevine_variant_Id_sequence, 243 Hop_stunt_viroid_grapevine_variant_Ie_sequence, 244 Hop_stunt_viroid_grapevine_variant_IIa_sequence, 245 Hop_Stunt_Viroid_HSV_297, 246 Hop_stunt_viroid_HSVd, 247 Hop_Stunt_Viroid_HSVd_298, 248 Hop_stunt_viroid_HSVd_isolate_genome_from_grapefruit_299, 249 Hop_stunt_viroid_HSV_Korean_strain_mRNA_for_viroid_297, 250 Hop_stunt_viroidHSV_sequence_297, 251 'Hop stunt viroid isolate 09-2009-2140hs', 252 'Hop stunt viroid isolate 09-2009-854', 253 'Hop stunt viroid isolate 26x-c11', 254 'Hop stunt viroid isolate 26x-c33', 255 'Hop stunt viroid isolate 26X-l11m', 256 'Hop stunt viroid isolate 26X-l12', 257 'Hop stunt viroid isolate 26x-l22m', 258 'Hop stunt viroid isolate 26x-l28', 259 'Hop stunt viroid isolate 26X-l33', 260 'Hop stunt viroid isolate 26x-l4', 261 Hop_stunt_viroid_isolate_391a, 262 Hop_stunt_viroid_isolate_570, 263 Hop_stunt_viroid_isolate_580, 264 Hop_stunt_viroid_isolate_676, 265 Hop_stunt_viroid_isolate_apricot_Ring_Pox, 266 'Hop stunt viroid isolate Aridaia-570', 267 Hop_stunt_viroid_isolate_Ca903, 268 Hop_stunt_viroid_isolate_CA909, 269 'Hop stunt viroid isolate cl-c19', 270 'Hop stunt viroid isolate cl-c25', 271 'Hop stunt viroid isolate cl-c3', 272 'Hop stunt viroid isolate cl-c37', 273 'Hop stunt viroid isolate cl-c51', 274 Hop_stunt_viroid_isolate_CQ_clone_1, 275 Hop_stunt_viroid_isolate_CQ_clone_2, 276 Hop_stunt_viroid_isolate_CQ_clone_3, 277 Hop_stunt_viroid_isolate_CVdIIA_10uy, 278 'Hop stunt viroid isolate CVd-IIa 117', 279 Hop_stunt_viroid_isolate_CVdIIA_11uy, 280 Hop_stunt_viroid_isolate_CVdIIa_17uy, 281 'Hop stunt viroid isolate CVdIIa 205-2-1', 282 'Hop stunt viroid isolate CVdIIa 205-2-4', 283 'Hop stunt viroid isolate CVdIIa 54-2-1', 284 'Hop stunt viroid isolate CVdIIa 54-2-2', 285 'Hop stunt viroid isolate CVd-IIa or E819', 286 'Hop stunt viroid isolate CVd-IIb or Ca902', 287 'Hop stunt viroid isolate CVd-IIc or Ca905', 288 Hop_stunt_viroid_isolate_dapple_plum_fruit, 289 Hop_stunt_viroid_isolate_e, 290 Hop_stunt_viroid_isolate_f, 291 'Hop stunt viroid isolate GZ-1', 292 Hop_stunt_viroid_isolate_H1, 293 Hop_stunt_viroid_isolate_hAIw36, 294 Hop_stunt_viroid_isolate_hAIw5, 295 Hop_stunt_viroid_isolate_HCSC01, 296 Hop_stunt_viroid_isolate_HCSC08, 297 Hop_stunt_viroid_isolate_HCSC10, 298 Hop_stunt_viroid_isolate_hFK82, 299 Hop_stunt_viroid_isolate_hKFKi, 300 Hop_stunt_viroid_isolate_hKIw, 301 Hop_stunt_viroid_isolate_HNiagD08, 302 Hop_stunt_viroid_isolate_hSIw, 303 Hop_stunt_viroid_isolate_HSVd, 304 Hop_stunt_viroid_isolate_HSVd10, 305 Hop_stunt_viroid_isolate_HSVd11, 306 Hop_stunt_viroid_isolate_HSVd12, 307 Hop_stunt_viroid_isolate_HSVd13, 308 Hop_stunt_viroid_isolate_HSVd14, 309 Hop_stunt_viroid_isolate_HSVd15, 310 Hop_stunt_viroid_isolate_HSVd16, 311 Hop_stunt_viroid_isolate_HSVd17, 312 Hop_stunt_viroid_isolate_HSVd2, 313 Hop_stunt_viroid_isolate_HSVd22, 314 Hop_stunt_viroid_isolate_HSVd3, 315 Hop_stunt_viroid_isolate_HSVd32, 316 Hop_stunt_viroid_isolate_HSVd4, 317 Hop_stunt_viroid_isolate_HSVd42, 318 Hop_stunt_viroid_isolate_HSVd5, 319 Hop_stunt_viroid_isolate_HSVd52, 320 Hop_stunt_viroid_isolate_HSVd6, 321 Hop_stunt_viroid_isolate_HSVd62, 322 Hop_stunt_viroid_isolate_HSVd7, 323 Hop_stunt_viroid_isolate_HSVd72, 324 Hop_stunt_viroid_isolate_HSVd8, 325 Hop_stunt_viroid_isolate_HSVd9, 326 Hop_stunt_viroid_isolate_HSVdE117, 327 'Hop stunt viroid isolate HSVd-gb', 328 'Hop stunt viroid isolate HSVd-IIa 815-11', 329 'Hop stunt viroid isolate HSVd-IIa 815-3an', 330 'Hop stunt viroid isolate HSVd-IIa 816-8', 331 'Hop stunt viroid isolate HSVd-IIa 817', 332 'Hop stunt viroid isolate HSVd-IIb 814-1', 333 'Hop stunt viroid isolate HSVd-IIc 816-7', 334 Hop_stunt_viroid_isolate_IIaI14, 335 Hop_stunt_viroid_isolate_IIaI22, 336 Hop_stunt_viroid_isolate_IIaI3, 337 Hop_stunt_viroid_isolate_IIaI4, 338 Hop_stunt_viroid_isolate_IIaS1S3, 339 Hop_stunt_viroid_isolate_IIaS1S3_HSVd, 340 Hop_stunt_viroid_isolate_IIaS4, 341 Hop_stunt_viroid_isolate_IIbI1, 342 Hop_stunt_viroid_isolate_IIbI13, 343 Hop_stunt_viroid_isolate_IIbI2_, 344 Hop_stunt_viroid_isolate_IIbS2, 345 Hop_stunt_viroid_isolate_IIcI4, 346 Hop_stunt_viroid_isolate_IIcI914, 347 Hop_stunt_viroid_isolate_IIcS1, 348 hop_stunt_viroid_isolate_IIsc2, 349 'Hop stunt viroid isolate ISA 5-CT-I', 350 'Hop stunt viroid isolate ISA 6-SR-I', 351 'Hop stunt viroid isolate ISA 7-RC-I', 352 Hop_stunt_viroid_isolate_Jabong, 353 'Hop stunt viroid isolate Kernitsa-327', 354 Hop_stunt_viroid_isolate_LMSX2, 355 Hop_stunt_viroid_isolate_Mor17, 356 Hop_stunt_viroid_isolate_Mor24, 357 Hop_stunt_viroid_isolate_Mor4, 358 Hop_stunt_viroid_isolate_Mor61, 359 Hop_stunt_viroid_isolate_Mor9, 360 'Hop stunt viroid isolate PM-26x clone 26x-c13', 361 'Hop stunt viroid isolate PM-26x clone 26x-c18', 362 'Hop stunt viroid isolate PM-26x clone 26x-c19', 363 'Hop stunt viroid isolate PM-26x clone 26x-c2', 364 'Hop stunt viroid isolate PM-26x clone 26x-c22', 365 'Hop stunt viroid isolate PM-26x clone 26x-c23', 366 'Hop stunt viroid isolate PM-26x clone 26x-c26', 367 'Hop stunt viroid isolate PM-26x clone 26x-c29', 368 'Hop stunt viroid isolate PM-26x clone 26x-c45', 369 'Hop stunt viroid isolate PM-26X clone 26x-p26', 370 'Hop stunt viroid isolate PM-26X clone 26x-p3', 371 'Hop stunt viroid isolate PM-26X clone 26x-p35', 372 'Hop stunt viroid isolate PM-26X clone 26x-p44', 373 Hop_stunt_viroid_isolate_Roma1, 374 Hop_stunt_viroid_isolate_Rouge_de_Rousillon_D08, 375 Hop_stunt_viroid_isolate_SC_clone_1, 376 Hop_stunt_viroid_isolate_SC_clone_2, 377 Hop_stunt_viroid_isolate_SC_clone_3, 378 'Hop stunt viroid isolate sh-ay-01', 379 Hop_stunt_viroid_isolate_soR2, 380 Hop_stunt_viroid_isolate_soV1, 381 Hop_stunt_viroid_isolate_soWn3, 382 Hop_stunt_viroid_isolate_Tahiti_lime_1, 383 Hop_stunt_viroid_isolate_Tahiti_lime_11, 384 Hop_stunt_viroid_isolate_Tahiti_lime_2, 385 Hop_stunt_viroid_isolate_Tahiti_lime_3, 386 Hop_stunt_viroid_isolate_Tahiti_lime_4, 387 Hop_stunt_viroid_isolate_Tahiti_lime_5, 388 Hop_stunt_viroid_isolate_Tahiti_lime_6, 389 Hop_stunt_viroid_isolate_Tahiti_lime_7, 390 Hop_stunt_viroid_isolate_Tahiti_lime_8, 391 Hop_stunt_viroid_isolate_Thailand, 392 Hop_stunt_viroid_isolate_UMCX1, 393 Hop_stunt_viroid_isolate_Whang, 394 'Hop stunt viroid RNA complete genome isolate hAIw36-5 296', 395 'Hop stunt viroid RNA complete genome isolate hKF82-4 297', 396 Hop_stunt_viroid_sequence_almond_isolate_HSVd, 397 Hop_stunt_viroid_sequence_almond_isolate_HSVd2, 398 Hop_stunt_viroid_strain_citrus_yellow_corky_vein_viroid_A, 399 Hop_stunt_viroid_strain_split_bark, 400 Hop_stunt_viroid_strain_yellow_corky_vein, 401 Hop_stunt_viroid_strain_yellow_corky_vein2, 402 'Hop stunt viroid variant 10SA1-IW1 302', 403 'Hop stunt viroid variant 10SA1-IW2 301', 404 Hop_stunt_viroid_variant_AB2, 405 Hop_stunt_viroid_variant_AD1, 406 Hop_stunt_viroid_variant_AD2, 407 Hop_stunt_viroid_variant_BF, 408 Hop_stunt_viroid_variant_E120P8, 409 Hop_stunt_viroid_variant_E127, 410 Hop_stunt_viroid_variant_E180, 411 Hop_stunt_viroid_variant_EX1, 412 Hop_stunt_viroid_variant_FA, 413 Hop_stunt_viroid_variant_FO, 414 Hop_stunt_viroid_variant_KS14, 415 Hop_stunt_viroid_variant_MA, 416 Hop_stunt_viroid_variant_MK, 417 Hop_stunt_viroid_variant_WP, 418 Hop_stunt_viroid_variant_WS1, 419 Hop_stunt_viroid_variant_WS2; TREE PAUP_1 = [&R] (((341:0.01957334,419:1.0E-8):0.02594137,(414:1.0E-8,(333:1.0E-8,(287:1.0E-8,(400:1.0E-8,(398:1.0E-8,(345:1.0E-8,(78:1.0E-8,(42:1.0E-8,(369:0.00669542,(347:0.00658682,(368:0.00661251,(177:1.0E-8,(406:1.0E-8,(389:1.0E-8,(348:1.0E-8,(196:1.0E-8,(346:1.0E-8,(83:1.0E-8,(371:1.0E-8,(363:1.0E-8,(367:0.00660545,(365:0.00659861,(360:0.00659897,(364:0.00659899,(362:1.0E-8,((255:1.0E-8,256:1.0E-8):0.00659674,((260:1.0E-8,372:1.9007E-4):0.00638438,(15:1.0E-8,(404:1.0E-8,(11:0.00645878,(12:0.0064587,14:0.00645773):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):0.00643795):1.0E-8):0.011728175,((253:0.00656313,((258:0.01325732,370:0.01317339):0.0,(361:0.02679277,(13:0.01295213,366:0.04095234):1.0E-8):1.0E-8):1.0E-8):1.0E-8,(412:0.00660218,(25:0.02582959,(((7:1.0E-8,9:0.00635229):1.0E-8,(150:0.01328712,((8:0.00630246,10:1.0E-8):0.00638839,(23:1.0E-8,(275:0.00620293,286:1.0E-8):1.0E-8):1.0E-8):0.00608168):0.00644475):1.0E-8,((59:1.0E-8,(93:1.0E-8,(75:1.0E-8,(69:1.0E-8,((64:1.0E-8,(291:1.0E-8,(70:1.0E-8,(343:0.00637243,(74:1.0E-8,(71:1.0E-8,(87:0.00632287,(76:1.0E-8,(61:1.0E-8,62:1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.6E-7):6.0E-8):0.0):0.0,(72:1.0E-8,(47:0.00632097,(58:1.0E-8,(53:1.0E-8,(92:1.0E-8,(90:1.0E-8,(88:1.0E-8,(82:1.0E-8,(80:1.0E-8,((81:1.0E-8,91:1.0E-8):0.0063248,(79:1.0E-8,(77:1.0E-8,(73:1.0E-8,89:0.00632591):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):3.2368E-4):0.00606217):1.0E-8):1.0E-8):1.0E-8):1.0E-8):0.00632153,(145:0.0127432,(26:0.01847926,((357:0.00595367,(147:1.0E-8,(148:0.01195555,(359:1.0E-8,(355:1.0E-8,358:1.0E-8):1.0E-8):0.00595172):1.0E-8):1.0E-8):1.0E-8,(356:0.01207025,(((349:0.01270495,(350:1.0E-8,(43:1.0E-8,46:1.0E-8):0.00608328):1.0E-8):1.0E-8,((269:0.01292116,(254:0.00873773,((1:1.0E-8,267:1.0E-8):0.00646277,((344:1.0E-8,(173:1.0E-8,(2:1.0E-8,411:1.0E-8):1.0E-8):1.0E-8):1.0E-8,((17:0.01229393,(118:1.0E-8,(97:0.0063778,(123:1.0E-8,167:1.0E-8):1.0E-8):0.00636539):0.00666314):0.00609896,(((19:1.0E-8,342:0.03184123):0.0,(332:1.0E-8,(18:1.0E-8,52:1.0E-8):1.0E-8):1.0E-8):1.0E-8,((4:1.0E-8,5:0.0064589):0.00644889,(20:1.0E-8,(3:1.0E-8,(6:0.01268047,(21:0.0062376,(16:1.0E-8,22:1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):0.00618631):0.00610693):0.0):0.0):0.01255807):0.00779726):0.00805918,((((30:1.0E-8,45:1.0E-8):1.0E-8,(31:1.0E-8,38:1.0E-8):0.01197012):0.00596701,((257:0.00317548,407:0.00316734):0.00563362,((278:1.0E-8,(246:1.0E-8,(386:1.0E-8,402:1.0E-8):1.0E-8):1.0E-8):1.0E-8,(273:1.0E-8,(413:1.0E-8,(408:0.01215714,(410:1.0E-8,((328:0.00626368,329:1.0E-8):0.00594515,((382:1.0E-8,409:1.0E-8):1.0E-8,((50:1.0E-8,(55:1.0E-8,388:1.0E-8):1.0E-8):1.0E-8,(331:0.03092212,(146:0.01241116,330:1.0E-8):1.0E-8):0.01215879):0.00602088):1.0E-8):0.00595549):0.0):0.00601773):1.0E-8):1.0E-8):1.0E-8):0.00595555):1.0E-8,(401:0.00608613,(151:0.00631791,((259:1.0E-8,((152:1.0E-8,(336:1.0E-8,(67:1.8314E-4,(27:1.0E-8,(28:0.0124134,29:1.0E-8):0.006173):0.01242967):0.0059106):1.0E-8):1.0E-8,(271:1.0E-8,(149:1.0E-8,(24:1.0E-8,((403:0.01239097,(392:1.0E-8,(334:1.0E-8,(337:1.0E-8,405:1.0E-8):1.0E-8):1.0E-8):1.0E-8):0.00608466,(272:1.0E-8,(354:1.0E-8,(285:1.0E-8,(85:1.0E-8,(340:1.0E-8,(86:1.0E-8,327:0.0248375):1.0E-8):1.0E-8):0.0061106):1.0E-8):0.00311323):0.00305133):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8,((270:0.00380022,375:0.00571543):0.00281827,(44:1.0E-8,(274:0.00609344,(276:1.0E-8,(277:1.0E-8,(379:1.0E-8,(57:1.0E-8,(84:1.0E-8,((339:1.0E-8,(63:1.0E-8,(384:1.0E-8,(281:1.0E-8,(383:1.0E-8,(66:0.0060895,(48:0.00609085,(326:0.0061423,(284:0.01230596,(280:0.01230551,380:1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8,(390:1.0E-8,((68:1.0E-8,(51:1.0E-8,(338:1.0E-8,(282:1.0E-8,416:1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8,(56:1.0E-8,(65:1.0E-8,(387:1.0E-8,(283:1.0E-8,(385:1.0E-8,(49:1.0E-8,(60:1.0E-8,(418:1.0E-8,(54:1.0E-8,(279:0.00609001,(335:0.00609582,(376:0.00609503,(377:1.0E-8,381:0.03048542):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):1.0E-8):0.01809424):1.0E-8,(((104:1.0E-8,165:1.0E-8):0.03246311,(((98:1.0E-8,268:1.0E-8):1.0E-8,(99:1.0E-8,100:1.0E-8):0.01852138):1.0E-8,((127:1.0E-8,166:1.0E-8):0.02751551,(174:1.0E-8,351:0.01632159):0.01685734):0.01220986):1.0E-8):1.0E-8,((399:0.04028431,(289:0.24148657,290:0.02046833):0.01793143):0.02488447,(((248:0.00620616,415:1.0E-8):0.00627353,(374:0.00651395,(40:0.00613522,353:0.06138469):0.0065058):5.2E-7):1.0E-8,((296:0.01928174,((264:0.07623689,301:0.18459304):0.0061207,((((115:0.01246956,300:1.0E-8):4.71E-6,(117:0.01245625,294:1.0E-8):0.00627863):0.00645824,((394:0.00634357,(293:1.0E-8,302:0.02344433):0.0):0.00739423,((312:0.00712882,(304:0.00617233,314:0.01310076):0.01430108):0.03100722,((105:0.00623588,(131:0.0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END; BEGIN TREES; TITLE CEVd; LINK TAXA = Taxa1; TRANSLATE 1 Citrus_exocortis_viroid_isolate_CSC9, 2 Citrus_exocortis_viroid_L, 3 'Citrus exocortis viroid CEV-g', 4 Citrus_exocortis_viroid_isolate_89002600, 5 Citrus_exocortis_viroid_isolate_ca6, 6 Citrus_exocortis_viroid_Sj_1, 7 Citrus_exocortis_viroid_isolate_Sj_3, 8 'Citrus exocortis viroid isolate Sj-Slo', 9 Citrus_exocortis_viroid_Sj_2, 10 'Citrus exocortis viroid Sj-LS', 11 Citrus_exocortis_viroid_isolate_CSC07, 12 'Citrus exocortis viroid isolate CEVd-i-18', 13 'Citrus exocortis viroid strain severe CEVd-YN', 14 Citrus_exocortis_viroid_isolate_NiagD11, 15 'Citrus Exocortis Viroid CEVdg-M', 16 'Citrus Exocortis Viroid CEVdg-S', 17 'Citrus exocortis viroid isolate CEVd-i-19', 18 'Citrus exocortis viroid isolate CEVd-i-20', 19 Citrus_exocortis_viroid_isolate_CEVd, 20 Citrus_exocortis_viroid_isolate_CEVd2, 21 Citrus_exocortis_viroid_isolate_CEVd3, 22 Citrus_exocortis_viroid_isolate_CEVd4, 23 Citrus_exocortis_viroid_isolate_CEVd5, 24 Citrus_exocortis_viroid_isolate_CEVd6, 25 'Citrus exocortis viroid, strain de26', 26 'Citrus exocortis viroid CEV-DE30', 27 'Citrus exocortis viroid CEV-JB', 28 Citrus_exocortis_viroid_isolate_TL11, 29 Citrus_exocortis_viroid_isolate_TL5, 30 Citrus_exocortis_viroid_isolate_TL7, 31 Citrus_exocortis_viroid_isolate_TL8, 32 'Citrus exocortis viroid isolate CEVd-HB', 33 'Citrus exocortis viroid strain severe CEVd-HN', 34 Citrus_exocortis_viroid_isolate_CEVd7, 35 Citrus_exocortis_viroid_isolate_CSC10, 36 Citrus_exocortis_viroid_isolate_CEVd8, 37 'Citrus exocortis viroid isolate Hn-G1', 38 Citrus_exocortis_viroid_isolate_CEVd9, 39 Citrus_exocortis_viroid_isolate_CEVd10, 40 Citrus_exocortis_viroid_isolate_CEVd11, 41 Citrus_exocortis_viroid_isolate_CEVd12, 42 Citrus_exocortis_viroid_isolate_CEVd13, 43 Citrus_exocortis_viroid_isolate_CSC11, 44 Citrus_exocortis_viroid_isolate_CEVd14, 45 Citrus_exocortis_viroid_isolate_CEVd15, 46 Citrus_exocortis_viroid_isolate_CEVd16, 47 'Citrus exocortis viroid isolate 206-4uy', 48 'citrus exocortis viroid tomato hybrid, CEVt', 49 'citrus exocortis viroid tomato, CEVt', 50 'Citrus exocortis viroid isolate 043-8uy', 51 'citrus exocortis viroid Gynura, CEVg', 52 'Citrus exocortis viroid isolate CEVd-i-2', 53 'citrus exocortis viroid tomato hybrid callus, CEVcls 370 ', 54 Citrus_exocortis_viroid_2, 55 Citrus_exocortis_viroid_isolate_8900808, 56 'Citrus exocortis viroid isolate CEVd-i-1', 57 'Citrus exocortis viroid isolate CEVd-Croatia', 58 'Citrus exocortis viroid isolate CEVd-XNM-HJ Guangdong-YC', 59 'Citrus exocortis viroid isolate CEVd-XNM-XY Guangdong-YC', 60 'Citrus exocortis viroid isolate CEVd-DI 56', 61 'Citrus exocortis viroid isolate CEVd-DI 129', 62 Citrus_exocortis_viroid_isolate_imp1, 63 Citrus_exocortis_viroid_isolate_LMPE4, 64 'Citrus exocortis viroid isolate 9675-FI-I', 65 Citrus_exocortis_viroid, 66 Citrus_exocortis_viroid_from_Colombia, 67 Citrus_exocortis_viroid_isolate_soR2, 68 Citrus_exocortis_viroid_variant_AD, 69 Citrus_exocortis_viroid_variant_ADG, 70 'Citrus exocortis viroid isolate 150-4uy', 71 'Citrus exocortis viroid isolate CEVd-ZGS-ZK China', 72 'Citrus exocortis viroid, host=Vicia faba', 73 'Citrus exocortis viroid isolate CEVd-tun-cl3', 74 Citrus_exocortis_viroid_clone_CEVd2, 75 Citrus_exocortis_viroid_clone_CEVd22, 76 Citrus_exocortis_viroid_isolate_b, 77 Citrus_exocortis_viroid_isolate_d, 78 Citrus_exocortis_viroid_isolate_a, 79 Citrus_exocortis_viroid_isolate_c, 80 'Citrus exocortis viroid isolate CEVd-tun-cl4', 81 Citrus_exocortis_viroid_isolate_LMPE3, 82 Citrus_exocortis_viroid_isolate_LMPEm, 83 Citrus_exocortis_viroid_isolate_BSE, 84 Citrus_exocortis_viroid_isolate_LMPE7, 85 'Citrus exocortis viroid CEVd-225', 86 'Citrus exocortis viroid isolate CEVd-gb4', 87 'Citrus exocortis viroid isolate CEVd-tun-cl1', 88 Citrus_exocortis_viroid_isolate_GBI2, 89 Citrus_exocortis_viroid_isolate_GBI4, 90 Citrus_exocortis_viroid_isolate_3823889, 91 'Citrus exocortis viroid isolate 1863019-4', 92 Citrus_exocortis_viroid_isolate_ver2, 93 Citrus_exocortis_viroid_isolate_3123575, 94 'Citrus exocortis viroid isolate CEVd-TV', 95 Citrus_exocortis_viroid_isolate_ver1, 96 'Citrus exocortis viroid isolate ISA 8-NA-I', 97 'Citrus exocortis viroid isolate CEVd-tun-cl2', 98 Citrus_exocortis_viroid_variant_KA, 99 Citrus_exocortis_viroid_isolate_imp2, 100 Citrus_exocortis_viroid_isolate_imp3, 101 'Citrus exocortis viroid isolate CEVd-Italy-BL China', 102 Citrus_exocortis_viroid_isolate_S1, 103 Citrus_exocortis_viroid_isolate_S3, 104 'Citrus exocortis viroid isolate ISA 3-RC-I', 105 Citrus_exocortis_viroid_isolate_Severe_clone_1, 106 Citrus_exocortis_viroid_isolate_Severe_clone_2, 107 Citrus_exocortis_viroid_isolate_Severe_clone_3, 108 'Citrus exocortis viroid, strain yellow corky vein', 109 Citrus_exocortis_viroid_isolate_soV1, 110 'Citrus exocortis viroid isolate CEVd-XNM-ZK Guangdong-YC', 111 'Citrus exocortis viroid isolate CEVd-XNM-YZ Guangdong-YC', 112 'citrus exocortis viroid citron, CEVc', 113 'Citrus exocortis viroid isolate ISA 2-SR-I', 114 'Citrus exocortis viroid isolate CEVd-i-3', 115 Citrus_exocortis_viroid_variant_FO, 116 'Citrus exocortis viroid clone A2-C-7', 117 Citrus_exocortis_viroid_isolate_89002594, 118 Citrus_exocortis_viroid_4, 119 Citrus_exocortis_viroid_1, 120 'Citrus exocortis viroid CEV-A', 121 Citrus_exocortis_viroid_RNA_sequence, 122 'Citrus exocortis viroid CEV-JA', 123 'Citrus exocortis viroid isolate CEVd-t-2', 124 'Citrus exocortis viroid isolate CEVd-t-8', 125 'Citrus exocortis viroid isolate CEVd-t-7', 126 'Citrus exocortis viroid isolate CEVd-t-5', 127 'Citrus exocortis viroid isolate CEVd-t-6', 128 'Citrus exocortis viroid isolate CEVd-t-4', 129 'Citrus exocortis viroid isolate CEVd-t-1', 130 'Citrus exocortis viroid isolate CEVd-t-10', 131 'Citrus exocortis viroid isolate CEVd-t-9', 132 'Citrus exocortis viroid isolate CEVd-t-13', 133 'Citrus exocortis viroid isolate CEVd-t-15', 134 'Citrus exocortis viroid isolate CEVd-t-11', 135 'Citrus exocortis viroid isolate CEVd-t-12', 136 Citrus_exocortis_viroid_De25, 137 Citrus_exocortis_viroid_isolate_TL1, 138 Citrus_exocortis_viroid_isolate_1, 139 'Citrus exocortis viroid isolate CEVd-i-10', 140 'Citrus exocortis viroid isolate 205-E-1 Uy', 141 'Citrus exocortis viroid isolate 205-E-7 Uy', 142 'Citrus exocortis viroid isolate 206-2', 143 'Citrus exocortis viroid isolate 205-E-2 Uy', 144 'Citrus exocortis viroid isolate 205-E-5 Uy', 145 'Citrus exocortis viroid isolate 206-3uy', 146 'Citrus exocortis viroid isolate 9670-FI-I', 147 'Citrus exocortis viroid isolate 054-13uy', 148 'Citrus exocortis viroid isolate 54-E-3 Uy', 149 'Citrus exocortis viroid isolate CEVd-i-12', 150 'Citrus exocortis viroid isolate CEVd-i-16', 151 'Citrus exocortis viroid isolate CEVd-i-9', 152 'Citrus exocortis viroid isolate CEVd-i-11', 153 Citrus_exocortis_viroid_variant_MA, 154 Citrus_exocortis_viroid_isolate_S2, 155 Citrus_exocortis_viroid_2b, 156 Citrus_exocortis_viroid_clone_GV4, 157 Citrus_exocortis_viroid_isolate_TL3, 158 Citrus_exocortis_viroid_variant_E127, 159 'Citrus exocortis viroid clone A2-C-4', 160 'Citrus exocortis viroid clone A2-C-5', 161 'Citrus exocortis viroid clone A2-C-2', 162 'Citrus exocortis viroid clone A2-C-3', 163 'Citrus exocortis viroid clone A2-C-1', 164 'Citrus exocortis viroid clone A35-C-3', 165 'Citrus exocortis viroid clone A35-C-2', 166 'Citrus exocortis viroid AD1_CEVd plus strand', 167 'Citrus exocortis viroid isolate CEVd-f-2', 168 'Citrus exocortis viroid isolate CEVd-f-3', 169 'Citrus exocortis viroid isolate CEVd-f-6', 170 'Citrus exocortis viroid isolate CEVd-f-4', 171 'Citrus exocortis viroid isolate CEVd-f-5', 172 'Citrus exocortis viroid clone A35-C-1', 173 'Citrus exocortis viroid isolate CEVd-f-1', 174 'Citrus exocortis viroid isolate CEVd E-117', 175 Citrus_exocortis_viroid_isolate_AI1, 176 'Citrus exocortis viroid isolate T2-1', 177 'Citrus exocortis viroid isolate CEVd-i-13', 178 'Citrus exocortis viroid isolate CEVd-i-14', 179 'Citrus exocortis viroid isolate CEVd-i-15', 180 'Citrus exocortis viroid isolate CEVd-i-17', 181 'Citrus exocortis viroid isolate 454-FI-I', 182 'Citrus exocortis viroid isolate 9669-FI-I', 183 Citrus_exocortis_viroid_isolate_CEVd17, 184 Citrus_exocortis_viroid_isolate_CEVd18, 185 Citrus_exocortis_viroid_E117_V8, 186 'Citrus exocortis viroid isolate 054-10uy', 187 'Citrus exocortis viroid isolate 150-10uy', 188 'Citrus exocortis viroid isolate CEVd-i-4', 189 'Citrus exocortis viroid isolate CEVd-i-7', 190 'Citrus exocortis viroid isolate ISA 1-CT-I', 191 Citrus_exocortis_viroid_E117_V4, 192 Citrus_exocortis_viroid_E117_V6, 193 Citrus_exocortis_viroid_E117_V7, 194 'Citrus exocortis viroid isolate Ci-5', 195 Citrus_exocortis_viroid_E117_V3, 196 Citrus_exocortis_viroid_E117_V9, 197 'Citrus exocortis viroid isolate CEVd-i-6', 198 Citrus_exocortis_viroid_isolate_CEVd19, 199 'Citrus exocortis viroid isolate T1-1', 200 'Citrus exocortis viroid isolate 54-E-1 Uy', 201 'Citrus exocortis viroid isolate Ci-2', 202 'Citrus exocortis viroid isolate Ci-8', 203 Citrus_exocortis_viroid_isolate_soWn3, 204 Citrus_exocortis_viroid_variant_BF, 205 Citrus_exocortis_viroid_E117_V2, 206 'Citrus exocortis viroid isolate 54-E-18 Uy', 207 Citrus_exocortis_viroid_isolate_AI3, 208 'Citrus exocortis viroid isolate CEVd-i-5', 209 'Citrus exocortis viroid isolate CEVd-i-8', 210 Citrus_exocortis_viroid_isolate_CEVd20, 211 'Citrus exocortis viroid isolate Ci-1', 212 Citrus_exocortis_viroid_variant_E55K, 213 Citrus_exocortis_viroid_E117_V1, 214 Citrus_exocortis_viroid_E117_V5; TREE PAUP_1 = [&R] (1:0.09169525,((((11:0.06990612,14:0.01823916):0.01183384,(43:1.0E-8,(34:0.0049022,35:0.00490878):1.0E-8):1.0E-8):1.0E-8,((15:0.01519305,((17:1.0E-8,18:0.00485148):0.02013735,((16:0.0196979,(26:0.0100185,(25:0.00483486,27:1.0E-8):1.0E-8):1.0E-8):0.00488698,(31:1.0E-8,(30:1.0E-8,(28:1.0E-8,29:1.0E-8):1.0E-8):1.0E-8):1.0E-8):0.0):1.0E-8):0.00997709,((22:1.0E-8,23:1.0E-8):0.00992291,((32:1.0E-8,33:1.0E-8):0.00492768,((20:0.00983603,21:0.00488979):0.00492859,(42:0.00488019,(40:0.00486544,((36:1.0E-8,37:1.0E-8):0.00487173,(38:0.00487095,(45:1.0E-8,(46:1.0E-8,(44:1.0E-8,(19:0.01473194,(41:0.00486707,(24:0.00978552,39:0.00486707):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):0.01490946):0.0,((12:0.02547911,13:0.00551222):1.0E-8,((((74:1.0E-8,75:1.0E-8):0.0,(77:0.00499751,(76:0.00500793,(78:1.0E-8,79:1.0E-8):1.0E-8):1.0E-8):0.01026479):0.00533478,(73:0.02520322,(80:0.02065613,(((81:1.0E-8,82:1.0E-8):1.0E-8,(83:1.0E-8,84:1.0E-8):0.00536872):0.01654972,(89:1.0E-8,(85:0.02031471,(87:1.0E-8,(86:1.0E-8,88:1.0E-8):1.0E-8):1.0E-8):0.00504801):1.0E-8):0.00536732):1.0E-8):0.01716404):0.0258321,((96:0.01495884,97:1.0E-8):1.0E-8,(98:1.0E-8,((71:0.01622517,(101:0.02584756,(102:0.00992844,(103:0.00495937,(104:1.0E-8,(107:1.0E-8,(105:1.0E-8,106:1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):0.01362659):1.0E-8,(((66:1.0E-8,(64:0.01002999,65:0.00497703):0.00490533):0.00494172,(69:1.0E-8,(67:0.00484533,68:1.0E-8):1.0E-8):1.0E-8):0.01508544,(113:0.00995189,(115:0.01004791,(72:0.03014596,((166:0.0026007,199:0.00985162):0.00244182,((((58:0.01491402,59:1.0E-8):0.02484902,(167:0.00485479,(173:1.0E-8,(172:1.0E-8,(168:0.00484771,(170:1.0E-8,171:1.0E-8):0.00532655):0.0):0.0):0.0):0.0):0.0,((136:0.01479317,169:1.0E-8):0.00489198,(((164:0.004854,165:1.0E-8):1.0E-8,((123:0.00982795,(129:1.0E-8,((130:1.0E-8,131:1.0E-8):1.0E-8,(134:1.0E-8,(133:0.00482009,(132:0.00481793,135:1.0E-8):1.0E-8):1.0E-8):0.00482789):0.00484818):0.00484824):1.0E-8,(128:1.0E-8,((99:1.0E-8,100:0.00982573):0.01519875,(92:0.02399317,(95:0.005632,(94:1.0E-8,(93:0.00462101,(90:0.01872661,91:0.00909476):0.00693286):0.00538369):1.0E-8):0.00507707):0.00641414):0.02464154):0.0049447):0.00491568):1.0E-8,((118:1.0E-8,119:1.0E-8):0.00988158,(108:0.04726686,(63:0.03117355,(54:0.04652429,((126:0.00483825,(127:1.0E-8,(124:0.0048043,125:1.0E-8):0.004818):1.0E-8):0.00484818,((121:1.0E-8,(120:1.0E-8,122:1.0E-8):1.0E-8):0.0,((3:0.14794912,(51:0.02519895,(52:0.02032133,(53:0.00489011,(48:1.0E-8,49:1.0E-8):0.05675128):1.0E-8):5.9E-7):0.0):0.01472402,(56:0.02497149,(57:0.0309737,(2:0.14291465,((7:0.01046933,9:0.00920298):0.00835075,((5:0.00963519,6:1.0E-8):0.01433313,(8:1.0E-8,10:1.0E-8):0.01117318):0.00706639):0.03663064):0.04577204):1.9E-6):5.9E-7):0.01539741):0.01526847):1.0E-8):1.0E-8):0.0):0.00501472):0.00503902):0.00485555):1.0E-8):5.6E-7,((114:0.02527183,(4:0.10430174,109:0.02355806):0.01452223):0.0,(((154:0.00488485,(157:1.0E-8,(156:1.0E-8,158:1.0E-8):1.0E-8):1.0E-8):1.0E-8,((155:0.00229317,(160:1.0E-8,((110:0.01496716,111:0.01498555):0.0049419,(112:0.02017348,138:0.01012201):1.0E-8):0.00489824):0.0099205):0.00273425,(50:0.05164923,((116:0.01488483,137:0.01512054):0.00489292,(161:1.0E-8,(159:0.00489025,(162:0.00488468,163:1.0E-8):0.00488944):1.0E-8):0.0):0.0):0.00495155):0.0):0.00491158,(((174:0.00490561,(176:1.0E-8,(147:0.00996932,175:1.0E-8):0.0):0.0):0.0,((70:0.03113555,(142:1.0E-8,(60:0.01008887,(61:0.01344563,62:0.00499963):0.0066597):0.01512627):1.0E-8):1.0E-8,(47:0.06292555,(140:0.00493217,(141:0.00491237,(145:1.0E-8,(143:1.0E-8,144:1.0E-8):1.0E-8):1.0E-8):1.0E-8):0.0):0.00488323):0.00978352):0.00486518,(((183:1.0E-8,184:1.0E-8):0.00489854,(146:0.00984956,(181:1.0E-8,182:1.0E-8):0.0):0.0051337):0.00456949,((195:1.0E-8,(194:1.0E-8,196:1.0E-8):1.0E-8):0.00495136,((148:0.00970949,(186:1.0E-8,187:1.0E-8):0.00249116):0.00255908,(189:0.00489493,(185:0.00489451,(207:1.0E-8,(209:1.0E-8,(210:1.0E-8,(((213:1.0E-8,(151:0.00984121,214:1.0E-8):1.0E-8):1.0E-8,(211:1.0E-8,(208:1.0E-8,(206:1.0E-8,(188:0.00978196,190:0.00494727):0.0):0.0):0.0):0.0):0.0,(212:1.0E-8,((((192:0.00489896,203:1.0E-8):1.0E-8,(193:0.0048928,204:1.0E-8):1.0E-8):1.0E-8,(205:1.0E-8,((191:0.00489381,201:1.0E-8):1.0E-8,(200:1.0E-8,(197:0.00485362,198:0.00485374):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8,(202:1.0E-8,((153:0.00971543,(55:0.04083136,117:1.0E-8):0.0):0.00541035,((149:0.00487546,(139:0.01468174,152:1.0E-8):0.0048345):1.0E-8,(177:1.0E-8,(150:0.00983939,(180:1.0E-8,(178:0.00489542,179:0.00489542):1.0E-8):1.0E-8):0.00488636):0.00487326):1.0E-8):0.00535458):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.00533858):1.45E-6):0.0):0.01003029):0.00474262):0.005051):0.0058087):0.01850368):0.00987529):0.00545284):0.05589833):0.0211017):0.09169525); END;