#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on March 29, 2024; 14:59 GMT TreeBASE (cc) 1994-2008 Study reference: Lartillot N., & Philippe H. 2006. Computing Bayes Factors Using Thermodynamic Integration. Systematic Biology, 55(2): 195-207. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S1452] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=30; TAXLABELS Anopheles_gambiae Blastocystis_hominis Botryocladia_uvarioides Caenorhabditis_elegans Chlamydomonas_reinhardtii Chlorella_kessleri Cryptococcus_neoformans Cryptosporidium_parvum Dictyostelium_discoideum Entamoeba_histolytica Euglena_gracilis Gallus_gallus Gelidium_canariensis Giardia_lamblia Guillardia_theta Mastigamoeba_balamuthi Monosiga_brevicollis Neurospora_crassa Plasmodium_yoelii Porphyra_yezoensis Saccharomyces_cerevisiae Schizosaccharomyces_pombe Spodoptera_exigua Stentor_coeruleus Stylonychia_mytilus Tetrahymena_pyriformis Thalassiosira_pseudonana Trichomonas_tenax Triticum_aestivum Trypanosoma_cruzi ; END; BEGIN TAXA; TITLE Taxa2; DIMENSIONS NTAX=30; TAXLABELS Aquifex_aeolicus Bacillus_subtilis Bacteroides_thetaiotaomicron Bdellovibrio_bacteriovorus Bifidobacterium_longum Burkholderia_fungorum Campylobacter_jejuni Chlamydophila_caviae Chlorobium_tepidum Chromobacterium_violaceum Clostridium_botulinum Coxiella_burnetii Escherichia_coli Fusobacterium_nucleatum Geobacter_sulfurreducens Gloeobacter_violaceus Helicobacter_hepaticus Lactococcus_lactis Leptospira_interrogans Magnetococcus_sp Parachlamydia_sp Pirellula_sp Rubrobacter_xylanophilus Sinorhizobium_meliloti Synechocystis_sp Thermoanaerobacter_tengcongensis Thermobifida_fusca Thermotoga_maritima Treponema_denticola Zymomonas_mobilis ; END; BEGIN TAXA; TITLE Taxa3; DIMENSIONS NTAX=30; TAXLABELS Azotobacter_vinelandii Bifidobacterium_longum Buchnera_aphidicola Burkholderia_fungorum Chlamydia_muridarum Chlamydophila_pneumoniae Clostridium_acetobutylicum Clostridium_perfringens Corynebacterium_diphtheriae Coxiella_burnetii Desulfitobacterium_hafniense Fusobacterium_nucleatum Helicobacter_pylori Lactococcus_lactis Listeria_innocua Mycobacterium_leprae Neisseria_meningitidis Nostoc_sp Prochlorococcus_marinus Pseudomonas_fluorescens Ralstonia_metallidurans Rhodobacter_sphaeroides Streptococcus_mutans Streptomyces_avermitilis Thermoanaerobacter_tengcongensis Thermotoga_maritima Vibrio_parahaemolyticus Wolbachia_sp Xylella_fastidiosa Yersinia_pestis ; END; BEGIN TAXA; TITLE Taxa4; DIMENSIONS NTAX=39; TAXLABELS Agrobacterium_tumefaciens Anaplasma_marginale Azotobacter_vinelandii Bartonella_quintana Brucella_melitensis Buchnera_aphidicola Buchnera_aphidicolaXAA Buchnera_sp Campylobacter_jejuni Caulobacter_crescentus Coxiella_burnetii Desulfovibrio_desulfuricans Ehrlichia_chaffeensis Escherichia_coli Geobacter_metallireducens Haemophilus_somnus Helicobacter_pylori Legionella_pneumophila Magnetococcus_sp Mesorhizobium_loti Microbulbifer_degradans Neisseria_meningitidis Nitrosomonas_europaea Novosphingobium_aromaticivorans Pasteurella_multocida Pseudomonas_aeruginosa Ralstonia_metallidurans Rhodobacter_capsulatus Rhodopseudomonas_palustris Rickettsia_conorii Shewanella_oneidensis Shewanella_violacea Sinorhizobium_meliloti Vibrio_cholerae Vibrio_parahaemolyticus Wigglesworthia_brevipalpis Xanthomonas_axonopodis Xylella_fastidiosa Yersinia_pestis ; END; BEGIN TAXA; TITLE Taxa5; DIMENSIONS NTAX=40; TAXLABELS Agrobacterium_tumefaciens Aquifex_aeolicus Bacillus_subtilis Bdellovibrio_bacteriovorus Bifidobacterium_longum Borrelia_burgdorfer Buchnera_aphidicola Burkholderia_cepaciar Campylobacter_jejuni Chlamydophila_pneumoniae Chlorobium_tepidum Chloroflexus_aurantiacus Chromobacterium_violaceum Clostridium_perfringens Desulfovibrio_desulfuricans Escherichia_coli Exiguobacterium_sp Gemmata_obscuriglobus Geobacter_sulfurreducens Gloeobacter_violaceus Helicobacter_hepaticus Heliobacillus_mobilis Leptospira_interrogans Magnetococcus_sp Magnetospirillum_magnetotacticum Microbulbifer_degradans Parachlamydia_sp Pediococcus_pentosaceus Pirellula_sp Porphyromonas_gingivalis Propionibacterium_acnes Rhodobacter_capsulatus Rhodothermus_marinus Streptococcus_mutans Synechocystis_sp Thermoanaerobacter_tengcongensis Thermobifida_fusca Thermosynechococcus_elongatus Thermotoga_maritima Thermus_thermophilus ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M983] TITLE PGK; LINK TAXA = Taxa3; DIMENSIONS NCHAR=276; FORMAT DATATYPE=Protein SYMBOLS= "A C D E F G H I K L M N P Q R S T V W Y" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Azotobacter_vinelandii GKRVLIREDLNVPVKDGVVKSDARILASLPTIVMVCSHLGRPTSLKPVADYLSGALGVVLFENVRFNADELAQRYAALCDFVMDAFGTAHRAEGSTHGAGPLLAAELEALKALDNPQRPMAAIVAGSKVSTKLDVLNSLSQVCDQLIVGGGIANTFLAAAGYKVGKSLYEADLVDTAKAIAAKV-----SVPLPVDVVVAMILDIGPTILWNGPVGVFEFDQFGNGTKVLAEAIASIAGGGDTLAAIDKYGSYISTGGGAFLEFVEGKVLPAVAVL Bifidobacterium_longum GKRVLVRADFNVPLDGTTITDDGRIKAALPTIVILMAHLGRPKSLAPVAARLGELLGVVLLENVRFERAAYAKKIAALGEFVSDGFGVVHRAQGSNYDAGLLVEKEVKALKATENPERPFTVVLGGSKVSDKLGVIENLLDKANRLVIGGGMVFTFLKAKGYEVGTSLLEEDQLEKVKGYIETAEKNGVELVLPTDVVVNMGLDIGPTVVWNGPMGVFEVPEFAAGTKAVAQGLVTIVGGGDSASAVRNLGSHISTGGGASLEFLEGKELPGLKVL Buchnera_aphidicola NKKVLIRSDLNVPIKNNKISSYARIHASLPTIVIVTSHLGRPTSLFPVFKYFKKILPLIILENVRFNSKILSKKYATLCDFVMDAFGAIHRNEASTNGSGLLLESELKTLSALTNPVRPMVAIVGGAKVSTKFKTLTTLAKISDTLIVGGGIANTFISID-HNIGKSLHDPKFIEQAKILKEKYN-----IFIPTDSRVSEIMDFGDTILWNGPIGVFEFKNFSKGTEQLSKAIASIAGGGDTLSVVEMFKSYLSTGGGSFLKFLEGNKFRIIELL Burkholderia_fungorum GKRVFIRADLNVPQDDGNITEDTRIRASVPAIVMVTSHLGRPTSLAPVAKRLAELLGVVLLENCRVDSDELAQKMAKLCDYVNDAFGTAHRAEATTHGAGPLLAAELEALKALGAPKRPLVAIVAGSKVSTKLTILKSLADKVDQLIVGGGIANTFMLAAGLKIGKSLAEADLVNEAKAIIDAAKARGASVPIPTDVVTALILDIGPTIVWNGPVGVFEFDQFGNGTKTLAEAIASIAGGGDTLAAIAKYGSYISTGGGAFLEFLEGKKLPAVEVL Chlamydia_muridarum GKKVLVRVDFNVPIKDGKILDDVRIRSAMPTIIILVSHLGRPKSLAPIVPVLEGYLGVLLLENVRFEDPSFAVELAAYADYVNDAFGTSHRKHASVYRAGFLMEKELEFLHLLVEPKRPFTAILGGAKVSSKIGVIEALLSRVDNLVLAGGMGYTFLKAMNQQVGNSLVEETGIPLAKRVLEKARTQGVKIYLPVDAKVASGFDIGSTVFWNGPVGVYEVPPFDQGSKAIAQCLATVVGGGDAAAVVALAGSHVSTGGGASLEFLEKGYLPGTEIL Chlamydophila_pneumoniae EKKVLVRVDFNVPMQDGKILDDIRIRSAMPTIVILMSHLGRPKSLQPVVDVLEGYLGVLLLENLRFKDPTFAAELSSYGDYVNDAFGTSHRKHASVYVAGLLMEKELEFLHLLTSPKRPFTAILGGAKISSKIGVIEALLNQVDYLLLAGGMGFTFLQALGKSLGNSLVEKSALDLARNVLKIAKSRNVTIVLPSDVKAAQGFDIGPTVFWNGPVGVYEVPPFDSGSIAIANALGTVVGGGDAAAVVALAGSHVSTGGGASLEFLEQGFLPGTEVL Clostridium_acetobutylicum GKRVLVRCDFNVPLKDGVITDENRLNGALPTIVILCSHLGKAKTLAPVAKRLSELLGIVLLENTRFNDDAFSKDLASLADYVNDAFGTAHRAHCSTVGCGYLIQKELKFLSAVENPVRPFVAILGGAKVSDKINVINNLLEKVDTLIIGGGMAYTFLKAQGYTIGTSLLEADKVDYAKEMIEKAEAKGVKLLLPIDNIVGMGLDIGPTVVWNGPMGVFEFENFAKGTKDVAKAMATVIGGGDSAAAVNQLGTHISTGGGASLEFLEGKELPGIVAL Clostridium_perfringens GKKVLVRCDFNVPLKDGVITDENRLNGAMPTIVILCSHMGKPKSLAPVAKRLSEMLGVVLLQNTRYNGEELSKELASLAEFVNDAFGTAHRAHCSTVGCGYLIQKELKFLDAVETPERPFVAILGGAKVSDKINVINNLLEKVDTLIIGGGMAYTFLKAQGYTVGSSLVEEDKVEYAKEMLAKAEEKGVKLLLPVDHRVAMGLDIGPTVIWNGPMGVFEFENFNKGTIAVAKAMATIIGGGDSAAAVNILGSHISTGGGASLEFLEGKVLPGIAAL Corynebacterium_diphtheriae GRHVLVRSDFNVPLNDREITDAGRITASLPTIVILMAHLGRPKSLAPVAEALSEALGVLLLENVRFERGEFADQLVALTAFVSDGFGVVHRAQASVFDAGTLVEKELEVLKVASAPERPYAVILGGAKVSDKLGVIEALATKADKLIIGGGMCYTFLAAKGINVQKSLLQEEQINKCKELLEAYA---DKIVLPVDLVAAMSLDVGPTVFWNGPMGVFEFENFSAGTRGVAEAIISVVGGGDSAAAVRLLGSHISTGGGASLELLEGKNLPGVSVL Coxiella_burnetii NKRVMIREDLNVPMKNGKITNDERIVRALPTIVMILSHLGRPESLAPVARLLSKKLNAILCENVRFNNTELAKRMAELCDFVMDAFATAHRAQASTAGAGPLLISEVEALRALENPQKPLVAVVGGSKVSTKIHLLENLLDKVDQLIVGGGIANTFLKAQGYSIGKSLCENEWLDAAQQFWEKAAEKNVSLPLPVDVIVASIFDVGPTIVWNGPIGVFEIEAFSQGTRALAQAVASIVGGGDTLAALDKFNSYVSTAGGAFLEFLEGKILPAIKIL Desulfitobacterium_hafniense ------FVDFNVPMDDGNITNDTRIRAALPTIIILASHLGRPKSLAPVAKRLGELLKVLLLENVRYNEPEFVKQLARLAEYVNDAFGTAHRAHASTEGAGFLLQKEIESMKALENPERPFVAIIGGAKVSDKIGVIENLLHKVDALIIGGGMANTFLKAQGYSLGKSLVEGDKLSLAQEILEQGRELQVDILLPQDVVAAMALDIGPTIVWNGPMGVFEMEQFAKGTEKVAQAVATIVGGGDSVAAVEKMGSHISTGGGASLKLLKGKNLPGIAAL Fusobacterium_nucleatum NKKVLMRVDFNVPMKDGKITDENRIVQALPTILILFSHLGKVKSLKAVAEKLSELLGVLMFENTRFNDSELGKYWASLGDFVNDAFGTAHRAHASNVGVGFLVEKELKFIEAVNNPKRPLIAILGGAKVSDKIGVIENLLTKADKILIGGAMMFTFLKAEGKNIGTSLVEDDKLDLAKDLLA---KSNGKIVLPVDTVIAMGLDIGETVVWNGPMGVFEMSNFAKGTIGVCESIATIIGGGDSAAAAISLGTHISTGGGASLEFLEGKVLPGVEAI Helicobacter_pylori HKRVLIRVDFNVPLDELNITDDTRIRESLPTIIILVSHLGRPKSLKPFLKRLERLLNIFLLENIRFNDENLAKDLASLCDFVNDAFGTSHRKHASTYGSGFLLKKEIDSFQAFNHPLRPLLLIVGGAKVSSKLTLLKNILDLIDKLIIAGAMSNTFLKALGYDVQDSSVEDALINDALELLQSAKEKKVKVYLPIDAVTTKIADIGPTILWNGPLGVHEKQEFARGTTFLAHKIASLIGGGDTIDAINRAGSFISTGGGASLELLEGKILPCFEVL Lactococcus_lactis GKKVLVRVDFNVPIKDGVITNDNRITAALPTIAVLFSHLGRVKSLAPVAKALSEKLGILLVENTRFNDPELGKYWASLGDFVNDAFGTAHRAHASNVGAGFLLENEIAYIEAVEAPERPFVAILGGSKVSDKIGVIENLLSKADKVIIGGGMAYTFLKAQGYEIGTSLVEDDKLDLAKELLE---KAAGKLILPLDHKVAMGLDVASTVVWNGPVGVFENTDFQAGTVGLMEAIVSIIGGGDSAAAAINLGSWISTGGGASMELLEGKVLPGLAAL Listeria_innocua NKKVLVRVDFNVPMKDGKITNDNRIVAALPTIAILFSHLGKVKSLRPVAARLSELLGVLLFENTRFNDPELGKYWASLGDFVNDAFGTAHRAHASNVGAGFLMEKEIKFIGVVDNPARPLVAILGGAKVSDKIGVIENLLTKADKVLVGGGMTFTFMAAQGQEIGKSLLEADKVELAKGLLE---KAGDKLVLPVDAVVSMGLDIGQTVVWNGPMGVFELSNFAKGTIGVCEAIATIIGGGDSAAAAMDLGTHISTGGGASLEYLEGKELPGVASI Mycobacterium_leprae GRCVLVRCDLNVPLGDGAITDLGRVTASVPTLIVVAAHLGRPKSLEPVAAALGEQLGLLLLQNIRFERLALAKQLVELVGFVSDGFGVVHRRQASVYDAGILVADEIRILQLTSSAKRPYAVVLGGSKVSDKLGVIESLATKADSIVLGGGMCFTFLAAQGFSVGKSLLETEMIETCRSLLDTYA---DVLRLPMDIVVTMGLDIGPTIFWNGPMGVFEFPAYAAGTRGVAEAIVSVVGGGDSAAAMRALSSHLSTGGGASLEYLEGKTLPGIEVL Neisseria_meningitidis GKTVLIRADMNVPFKDGKISDDTRIRASIASVVIVMTHLGRPTDVAPVAAHLGSLLGVVMLQNVRINDLELGKAYASLCDFVNDAFGTAHRAQASTEAAGVLMAGELDALKALKQPARPMVAIVAGSKVSTKLTILESLADKVDQLIVGGGIANTFLLAEGKAIGKSLAEHDLVEESKKIMAKMAAKGGSVPLPTDVVVAMILDIGPTVVWNGPVGVFEFDQFAGGTKALAEAIASIAGGGDTLAAIAKFGGYISTGGGAFLEFLEGKELPAVAAL Nostoc_sp GKRALVRVDFNVPLDDGNITDDTRIRAALPTIVILASHFGRPK-LTPVAKRLSELLGVLLLENVRFNDPEFAKKLAANADYVNDAFGTAHRAHASTEGAGYLVEKELQYLSAIENPQRPLAAIIGGSKVSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLNVGKSLVEEDKLELAKSLEAKAKERGVSLLLPTDVVLAMGLDIGPTVIWNGPMGVFEFDKFAAGTEAIAHTLATIIGGGDSVAAVEKVGSHISTGGGASLELLEGKVLPGIAAL Prochlorococcus_marinus GKKVLVRVDFNVPLNDGQITDDTRIRAAIPTIVILAAHFGRPK-LTPVAARLSDILEVLLLENVRFNDLDFAKNLASHADYVNDAFGAAHRAHASTQGAGFLLEKELKYLGAIDAPKRPLAAIVGGSKVSSKIGVLDSLLDKCDKIIIGGGMIFTFYKARGLDVGKSLVEEDKLELARNLEAKAKNKGVELLLPSDVLLAMGLDIGPTIIWNGPMGVFEFDKFAEGTNAIATTLATIIGGGDSVAAVEKAGSHISTGGGASLELLEGKTLPGVAAL Pseudomonas_fluorescens GKRVLIREDLNVPVKDGVVTSDARILASLPTIVMVCSHLGRPTSLKPVADYLSKALGIVLFENVRFNADELAQQYAALCDFVMDAFGTAHRAEGSTHGAGPLLAAELDALKALGAPAKPMAAIVAGSKVSTKLDVLNSLSQICDQLIVGGGIANTFLAAAGHPVGKSLYEPDLLDTARAIAAKV-----SVPLPVDVVVAMILDIGPTILWNGPVGVFEFDQFGNGTKVLAEAIASIAGGGDTLAAIDKYGSYISTGGGAFLEFVEGKVLPAVEVL Ralstonia_metallidurans GKRVFIRADLNVPQDDGNITEDTRIRASVPAIVMVTSHLGRPTSLAPIATRLSELLGIVLLENCRVNSDELAQKMAKLCDYVNDAFGTAHRAEATTHGAGPLLAAEIDALRALGQPARPLVAIVAGSKVSTKLTILKALADKVDNLIVGGGIANTFMLAAGLKIGKSLAEADLVGDAKTIIDIMAARGASVPIPVDVVCAMILDIGPTIVWNGPVGVFEFDQFGNGTKVLAEAIASIAGGGDTLAAIAKYGGYISTGVG----------------- Rhodobacter_sphaeroides GKVVLVRVDVNVPMENGEVTDATRIEKIVPTVPVLLAHFGRPKSLRLVLPALQNALPVLLLENTRFNDPELAAAMAKLGQYVNDAFSAAHRAHASTEGAGRLMEAELKALAALGHPERPVVAVVGGAKVSTKLDLLGNLVGRVDHLVIGGGMANTFLVAQGIEVGKSLAERDMADTAREILSKAKAAGCTIHLPLDVVVAMILDAGPTLIWNGPLGAFEIEPFDAATNAAALQVASVAGGGDTVAALNKAGSYISTAGGAFLEWMEGKELPGVAAL Streptococcus_mutans GKKVLVRVDFNVPVKDGVITNDNRITAALPTIAVLFSHLGRVKSLAPVAADLAKKLVVLLVENTRFNDPELGKYWASLGDFVNDAFGTAHRAHASNVGAGFLLENEIAYIEAVDNPVRPFIAILGGSKVSDKIGVIENLLKKADKVLIGGGMTYTFLKAQGIEIGDSLVEEDKLDIAKDLLA---KANGKLILPVDSKEALGLDIGPTVVWNGPMGVFENPDFQAGTIGVMDAIVSIIGGGDSAAAAINLGSWISTGGGASMELLEGKVLPGLAAL Streptomyces_avermitilis GKRVFVRADLNVPLADGLITDDGRIRAVLPTVVVVASHLGRPKSLLPAAERLGELLGVAVIENLRFERGAFADRLAALADYVGDGFGAVHRKHASVYDAGYLIATEVNVLKLTEDVKRPYVVALGGAKVSDKLAVIDQLLGKADRLLIGGGMAYTFLKAKGYEVGISLLQEDQIPTVKEYMERAEKNGVELVLPVDVLVSEGLDIGPTVFWNGPMGVFEHPDYAEGTKAVAQALVTVVGGGDSAAAVRILGGHISTGGGASLEYLEGKTLPGLAAL Thermoanaerobacter_tengcongensis GKRVLVRVDFNVPMDEKNITDDRRIREALPTIVILVSHLGRPKSLKPVAKRLSELLKVLLLENVRFNDPEFAKELASLADYVNDAFGTAHRAHASTAGAGFLIEKELSIMEALENPKRPFVAILGGAKVSDKIGVITNLLEKVDSLLIGGGMAYTFIKAKGYEIGKSLLEEDKIELAKEIMEKAKQKGVNFMLPVDTVIAIGVDIGPTVVWNGPMGVFEIPEFAKGTKAIAKALSTIVGGGDSAAAIEQLGTHISTGGGASLEFLEGKVLPGIDIL Thermotoga_maritima GKRVIMRVDFNVPVKDGVVQDDTRIRAALPTIVILLSHLGRPKSLAPVAKRLSELLGVLLLENTRFNDPELAKFWASLADHVNDAFGTAHRAHASNVGAGFLMEKEIKFLKVTYNPEKPYVVVLGGAKVSDKIGVITNLMEKADRILIGGAMMFTFLKALGKEVGSSRVEEDKIDLAKELLEKAKEKGVEIVLPVDAVIAMGLDIGPTVVWNGPMGVFEIDDFAEGTKQVALAIATVVGGGDSAAAVNKFGSHVSTGGGASLEFLEGKELPGIASI Vibrio_parahaemolyticus GKRVFIRADLNVPVKDGKVTSDARIIASLPTIVMVTSHLGRPTSLQPVVNYLNDALDLVVLENVRFNEEELSKKYAALCDFVMDAFGTAHRAQASTHGAGPLLANELEALKAMDKPARPMVAIVGGSKVSTKLTVLESLSKIADQLVVGGGIANTFIAAAGHNVGKSLYEADLVDTAKKLMDEC-----AIPVATDVACAMIFDLGPTILWNGPVGVFEFKNFEAGTKGISEAIASVAGGGDTLAAIDKFGSYISTGGGAFLEFVEGKVLPAVEML Wolbachia_sp NKTVLLRVDFNVPIKDGEIRDVTRILRALPTIIIIISHFGRPKSLKNVIDTLSQLLNIILLENLRFSDSNFAKQLASLADYVNDAFSCSHRAHASISRAGFCLQDELKYLKAVSFKAKPITAIVGGAKISTKIKVLMKLTEKVNYLVLGGAIANNFLSFSKVNIGKSFFQNGVDDLLHNILETANKNNCKIVVPEDVLVAIILDIGPTLLWNGPIGVFEHSAFASGTIGVMKIVSSIIGGGDSLSAISAAGTYVSTGGGAFLDWLSGDEMPGVAAL Xylella_fastidiosa GKRVLIRQDLNVPIDQGRITSEQRIIASLPTIVMVTSHLGRPKSLAPVAKRLSQLLGLVLLENCRMNDEALARKYAALCDFVMDAFGTAHRAQASTHGGGPLLMAELDALRGLKHPVKPLLAIVGGSKVSTKLELLSNLVNNVEQLITGGGIANTFLAAAGYPIGKSLYEADLIETAREIITVAKARGAEIPLPTDVVVALILDIGPTVVWNGPVGVFEFDAFSKGTEVLARAVASIAGGGDTLAAIDKYGSYISTGGGAFLEFLEGKTLPAVAAL Yersinia_pestis GKRVLIRADLNVPVKEGKVTSDARIRASLPTIVMVTSHLGRPTSLLPVVNYLKEKLSLVVLENVRFDDEALSKKYAALCDYVMDAFGTAHRAQASTHGAGPLLSAELEALKALGNPARPMVAIVGGSKVSTKLTVLGALSKIADKLIVGGGIANTFVAAQGHNVGKSLYEADLIPEAKRLLETC-----DIPVPTDVRVAQILDLGDTILWNGPVGVFEFPNFRKGTEIVARAIASIAGGGDTLAAIDLFGSYISTGGGAFLEFVEGKKLPAVVML ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M981] TITLE UVR; LINK TAXA = Taxa2; DIMENSIONS NCHAR=719; FORMAT DATATYPE=Protein SYMBOLS= "A C D E F G H I K L M N P Q R S T V W Y" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Aquifex_aeolicus IVIRGARQHNLKNIDVEIPKNKLVVITGPSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGVMEKPEVDSIEGLSPAIAIDQKTTSKNPRSTVGTVTEIYDYLRVLWANVGKPHCPHCGNLLSGLSK?GKRVMILSPIVRGKKGGYSRVKVDKKHTIELVIDRRLLEDVEKHGFSIPELSARLFSFNSPYGACPSCKGLGVKWEIDAVKAVKIIANVIRKLGYPWKKLFEGIIPHLERYIVEKPCPECKGARLRKEALAVLIIWDVVNMPVGKAKEFFIADRLLKEIIERLGFLVNVGLDYLSLSRSATTLSGGEMQRIRLATQLGSKLTGVLYVLDEPSIGLHPRDTSKLINTLKGLRDLGNTVVVVEHDPETIESADHVIELGPGAGKHGGYLVAQGTSLTGAYLSGRKEIPVPKERRRAKEHNLKNINVDIPLGLFVCITGVSGSGKSTLIYDILYKYAKNYFENIDKVINIDQSPIGRTPRSNPATYTKVFDLIRNLFAQTPEAKARGYKPGRFSFNVKGGRCEACQGEGVIKVEMHFLPPVYVTCEVCKGKRYNRETLEITYKGKNIADVLEMTVDEAYDFFPAIRRKLQILKDVGLGYIKLGQPAPTLSGGEAQRIKLARELSKKETGRTLYLLDEPTTGLHMDDVKKLIDVLQRLVDKGNTVVVIEHNLDVIKCADWIIDLGPEGGERGGQVVAVGTPESYTGKYLRKYL Bacillus_subtilis IEVKGARAHNLKNIDVTIPRDQLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDAIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARVGKPHCPEHGIEITSQTPERTKLQVLAPIVSGRKGGYVRVRIDKKHSIEVVIDRRLSDSLETCGFSIGELEPRLFSFNSPFGACPTCDGLGMKLEVDSLKENAVLEAVCTHYGIPVKDLFEGVLRNIERYMSQKSCPTCKGYRLKKEALAVLIIGKITELSVADALAFFIANLILREIVERLSFLDKVGLDYLTLSRAAGTLSGGEAQRIRLATQIGSRLSGVLYILDEPSIGLHQRDNDRLISALKNMRDLGNTLIVVEHDEDTMMAADYLIDIGPGAGIHGGQVISAGTSLTGSYLSGKKFIPLPPERRGASENNLKKVNAKFPLGTFTAVTGVSGSGKSTLVNEILHKALAQKLDHLDKVIDIDQAPIGRTPRSNPATYTGVFDDIRDVFAQTNEAKVRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVTYKGKSISDVLDMTVEDALSFFPKIKRKLQTLYDVGLGYITLGQPATTLSGGEAQRVKLASELHKRSTGRTLYILDEPTTGLHVDDIARLLVVLQRLVDNGDTVLVIEHNLDIIKTADYIVDLGPEGGAGGGTIVASGTPESYTGRYLKPVI Bacteroides_thetaiotaomicron ISIKGARVNNLKNIDVDIPRNKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSSYARQFLGRMSKPECDFIKGIPPAIAIEQKVNSRNPRSTVGTSTEIYEYLRLLYARVGRTYSPVSGEEVKKHSPEGTRYTVLTPIRLREDRGFNRVEVN???????LVDRRLTDSAETDGITFEEPNDQMFSFNSPIGACPVCEGFGKVIGIDSVYEGAIIHNA?DKFDFPYYELFHG?INDFFKYRGKTICPKCHGTRLKPEAGYVRVISELVDLPITELKEFFVARRILIEINSRIRFLIDVGLGYLTLNRLSNSLSGGESQRINLATSLGSSLVGSLYILDEPSIGLHSRDTDRLIRVLRQLQELGNTVVVVEHDEEIIRAADYIIDIGPNAGRLGGEVVYQGDSHTVRYLLGEEEIPVPEHRRGARENNLKGVNVKFPLNVMTVVTGVSGSGKSTLVRDIFYRALKRELRDLRNIEFVDQNPIGKSSRSNPVTYIKAYDEIRKLWAEQPLAKQMGYTAGHFSFNSEGGRCEECKGEGTITVEMQFMADLVLECESCHGKRFKADTLEVKFQDKNIYDVLEMTVNQAVEFFKKIVKRLLPLQDVGLGYIKLGQSSSTLSGGENQRVKLAFYLSQEKADPTLFIFDEPTTGLHFHDIRKLLDAFDALIRRGHSIVIIEHNMDVIKCADYVIDLGPEGGDKGGNIVAVGTPESYTGQFLKEKL Bdellovibrio_bacteriovorus IHLWGVKQNNLKNIEVKIPVGSMTVICGPSGSGKSSLAFETLFAEGQRRFIESMSNYARQFLNKAPKPDIEGINNIPPAISIEQKNTVKSSRSTVGTTTEIIDYLRLLYEKIGKSYCPTHHCPTEKESFAGKRGYLLVEINSEGRVGYLRIYIPPKETFYLVIDRRLADSLTQCGYTPPPLSSKLFSFNSPIGACPTCKGFGNILDIDSLAQGALLA?YCKKTKIPWKDLFE?YLDQIKYFRSPFQCPTCKGARLRTEANHVLIINDLSNLTIEDLNTFFVAGEVLKQIRSRLEFLMRVGVHYLSLGRETRTLSGGEYQRLILANQLGMGLSQALYVLDEPTVGLHPRDNDRLISILKDLKDLGNTLVIVEHDHDVIKASEHIIEMGPGSGYLGGEVVYSGTSNTVPFLKPSKNWQALRTIRGAKGHNLKNLDVTFPLNRLVTVTGVSGSGKSTLISKTLYPALARALEHIKNVLLIDQSPIGKSARSSPITYLKAFDAIRMIMSTTPESQSRGYTAGTFSLNVDGGRCPACKGTGYEEIDMMFMDNVVIPCDVCDGKKYRPEILEIQYKNKNIHEILSMTVNEAMNFFPNIRKPLSVLKEVGLDYLQLGQPANSLSGGESQRLKIAKELSQVQQKSTLYILDEPTTGLHFREVELLMKVLNKLIETGGSVVVVEHNLDVIRGSDYVIDLGPEAGKKGGNIVATGTPDSLTGQYLKRYI Bifidobacterium_longum ITIQGAREHNLKNVDLAIPRNRMVVFTGLSGSGKSSLAFDTLFAEGQRRYVESLSAYARQFLGQMDKPDVDFIEGLSPAVSIDQKTTNRNPRSTVGTITEIYDYLRLLFARTGIPHCPECGEPVASQTPERTRFQILSPVVKGRKGGYARALIDKKHTIEVVVDRRLTDSVETHTLELDEVEPRTFSFNAPYGACPACTGLGFKLEIDSLADGVILEGLAKEMGFPWKGLFEGVIRTLMRYMREVPCQVCHGRRLKPEVLAVTVIFDVCDMPVVRELAWIIAGEVLKEIKARLGFLNDVGLDYLTLSRAAATLSGGEAQRIRLATQIGSGLVGVMYVLDEPSIGLHQRDNERLIETLHHLRDLGNTLIVVEHDEDTIRRADWVVDIGPGAGERGGEVIYSGPSITGDYIAHRREIAVPAKRRGARENNLKNIDVSFPLGVLTVVTGVSGSGKSSLVNTILYPVLADKLDQVRKVIHVDQNPIGRTPRSNPATYTGVWDKIRTLFAKTPEAQVRGYGPGRFSFNVKGGRCEACHGDGTLKIEMNFLPDVYVDCEVCHGKRYNRETLEVTYNGKTVADILNMPIEEAADFFTGISRYLKTLVDVGLGYIRLGQPAPTLSGGESQRVKLATELQRRSDGKTVYILDEPTTGLHFEDVNKLLKVLQSLVDKGNTVIVIEHNLDVIKEADWLIDLGPEGGDGGGTIVTQGTPESWTGKFLKPML Burkholderia_fungorum IRIRGARTHNLKNVNLDLPRHKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLFARVGTPYCPDHEIPLEAQSPDETKLMILAPVVANRKGGFIRFRVRDKHTIDVVVDRRLAESFETCSYSLQELEPRLFSFNNPMGACPECDGLGQITFFDSLAAGAVLQSLAAFYEFAVEDLFEGIIPNLERYQNNQPCPACAGTRLRREARFVRIIFEISGWPLRDALGYFIADKVVKEIVARLMFLNNVGLDYLSLERSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIATLKHLRDLGNSVIVVEHDEDMIRMADYVVDMGPGAGEHGGMVIAEGTSMTGQYMSGARNIEFPDERKEAYGNNLKHVSLDLPVGLLTCVTGVSGSGKSTLINDTLYHAVAHHLEHFDKVINVDQSPIGRTPRSNPATYTGLFTPIRELFAGVPAAKERGYEAGRFSFNVKGGRCESCQGDGVLKVEMHFLPDVYVPCDVCHGKRYNRETLDVQYKGRNISEVLDMTVENAYEFFPVVARKLKTLLDVGLGYIRLGQSATTLSGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIALLLEVIHRLRDQGNTVVIIEHNLDVIKTADWVIDLGPEGGAGGGQIVAQGTPESFTGKYLAPLL Campylobacter_jejuni IKIIGARENNLKNIHLEIPKNKLIVFTGLSGSGKSTLAFGTLYAEGQRRYIESLSAYARQFLDKVGKPDVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLYARVGIQHCHRCGQKISSMSPKGAKIIIYSPLIREKKGGYVRAQIDKKHTIKLVIDRRLASDIEKCKISFVPLEPLSFSFNSPKGACEACDGLGIRYTLDSLENGAVLIAFCEQNEIPFMQLFEGVVKMAYEYMSEKICKDCGGHRLKPESLAVKVLGEILDMSIEDSTAFFISKPILKEINERLFFLYDVGLGYLSLGRDARTISGGEAQRIRIASQIGSGLSGVMYVLDEPSIGLHERDTAKLIKTLRNLQQKGNTLIVVEHDKMTIEEADFIVDIGPKAGKFGGEVVFSGTSETALYMNGKKQIS??QLQNNVNINNIQDLSVKFPLQNLVAITGVSGSGKSSLILQTLLPFAQEELEKLDKVIYLDQSPIGRTPRSNPATYTGAMDEIRNLFAATKEAKMRGYKAGRFSFNVKGGRCEKCSGDGEIKIEMHFLPDVMVVCDTCGGKRYNDATLEIKYKGKNISEILNMSVLEASEFFPKIKQKLDTLVKVGLDYLTLGQNATTLSGGEAQRIKLAKELSRSDTGKTLYILDEPTTGLHFEDVNKLILVLQHLVDLKNSVFVIEHNLDVIKNADYIIDMGPEGGVKGGKVISTGSVESYTGYYLDLEL Chlamydophila_caviae VHISGITVRNLKNISIEFLPGEIVLLTGVSGSGKSSLAFDTVYAAGRKRYVATLPAFFATNLSPLPDPTVEKIHGLSPTIAVKQNHFAYHAHSTVGSAAELSQHLALLFSLDGEARDPHTKQTLHLQSPEGTQVTILAPLINI???GYTKIRIDEESPVAIVVDSRMKVSLFSTQQTYAPLTPQVFSPHSLEDRCTQCQGSGIYITIDSIRENCCYQSLADTLNFPWKDLWRGILNEIGE?TSATSCPTCQGTGIGEYACAATWFVEFQKMPLDEFFSFT???EVLDGLNNRLSILINLGLSYLTPERTLATLSGGEQERTALAKHLGAELSGITYILDEPSIGLHPRDTHKLIQVIQKLRDQGNTILLVEHDEQMISFADRIIDIGPGAGIFGGEVLFNGTSLTASYLRHELTIDIPVRR?HATINNLKDITISLPLERITAVTGVSGSGKSSLINDTLVPAMERVIGTIERVVHITRDLPGRSQRSISLTYIKAFDDLRELFSQQPKSKRLGLTKGHFSFNLSLGACTECQGIGSITLDNH????TPIPCPLCHGKRFQPQILEVRYQGKNIADILAMTAYEAEKFFPHIHEKIHALCSLGLDHLPLGRPLSSLSGGEIQRLKLTYELLAPSKKPTLYILDEPTTGLHTHDIHALIHVLQSLTQQGHTVVVIEHNMHIVKIADYVIELGPEGGNLGGYLLASCTPETPTAKALQPYF Chlorobium_tepidum ?MLGGVSTHNLKHVTVRIPRNRFVVLTGLSGSGKSSLAFDTLYAEGHRRYVESLSAYVRQFLERMPKPEIETVEGIAPAIAIEQKAIPKNPRSTVGTVSEIYDYLRLLYARIGKIYSRDTGELVLKHTGTRFYVGYPFPSHHDERHGFFRLLKGELSELLVLVDRRVAQAAES?GVTYQEPSPQLFAFNSPIGACTSCQGFGRIAGIDSLKEGAILLKIAPEVGIPYEKLFKGLWPFFEEYRGYATCPECEGARLNPDALQVRVIGEVVRMTIADAQTFFVADSVLREINKRLGYLMDVGLDYLTLDRLTHTLSGGEFQRINLSTSLGSPLVGAIYILDEPSIGLHQSDSARLVALLKRLRDLGNTVVVVEHDREIIEAADEVIDLGPRAGRLGGEVVFHGPSLTADYLSGRKQIAVPAERRGAMQNNLRNIDVRFPLGVMTCVTGVSGSGKSTLVNDILKLGIIRAKEFIEKVEHVDQSPIGKSSRSNPATYLKIFDDIRQLFASTRESKSRGWKPGYFSFNIPGGRCETCAGEGTVKIEMQFLADIEAVCEECEGKRYKASTLEVKYNGLSISEVLDLTVEEAISFFKSIQKKLQVLQEVGLEYIRLGQSSSTLSGGEAQRLKLASFISRSDVSNTLFIFDEPTTGLHFDDISKLVRCFEELMARGNTLVIIEHNPDIIKQADWIIDLGPGAGVRGGDIVAVGTPESLTGRHLRGYL Chromobacterium_violaceum IRIRGARTHNLKNVNLDLPRNQLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLFARVGDPHCPDHNVPLSSQTPEETRVMILAPVIVGRKGGFVRVRVDKKHTIEVVIDRRLAESFETCSYSLPELEPRLFSFNNPMGACPKCDGLGEITFFDSLASGAILLALGEHYGFAFDDLFEGIIPNLERYQNNQACPHCSGSRLRLEARHVFILHEINQLPLKETAQFFVAEKIVKEIRERVSFLNNVGLDYLNLSRSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLLGTLKRLRDLGNSVIVVEHDEDAIREADYLVDMGPGAGEHGGEVLVAGTSVTGAFLSGRRKIALPGGRRGATGNNLKDVTLKLPLGGLVCITGVSGSGKSTLINDTLYKIAARDLDQLDKVINVDQSPIGRTPRSNPATYTGLFTPIRELFSGVPLARERGYGPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDVCHGKRYNRETLEVQYKGKSIQEVLEMTVEQALEFFPPVARKLKTLMDVGLGYIRLGQSATTLSGGEAQRVKLGLELSKRDTGRTLYILDEPTTGLHFHDIDLLLQVLHRLRESGNTVVVIEHNLDVVKTADWLIDLGPEGGAGGGQIIASGTPESHTGRYLAPLL Clostridium_botulinum IIIKGAKVNNLKNINLQLPRDKYIVFTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGQMDKPEVDYIEGLSPAISIDQKTTNRNPRSTVGTVTEIYDYLRLLYAKIGKPHCPKCGKEITQQTEERTKIQVLSPIINGRKGGYVRARIDKKHTIEAVVDRRLADSMETCNISIGEIAPRMFSFNSPYGKCDKCDGLGTLMEIDSIVEGAILKALSKEYKFPIEKLYEGVINNLRRYMSDNPCPKCKGARLHDEALSVTVIFEFCNMSIKKELDFIISNQILKEIRSRLKFLIDVGLDYLTLSRNASTLSGGESQRIRLATQIGSSLVGVLYILDEPSIGLHQRDNDRLIKTLKNLRDLGNTLVVVEHDEDTIREADYIVDIGPGAGEHGGEVVAAGTSITGQYIKGVRTISVPKERRGARENNLKNVSAKFPIGLFTCVTGVSGSGKSTLVNEILYKGIHKKLENVDKVINIDQSPIGRTPRSNPATYTGVFDIIREVFSNTQEAKMRGYKPGRFSFNVKGGRCEACTGDGIIKIEMQFLSDVYVPCEVCKGKRYNRETLEVKYKGKNISDVLNMTVEEALDFFPRIKSKLQTLMDVGLSYIRLGQSSTQLSGGEAQRIKLAYELSKRSTGKTLYILDEPTTGLHMEDVNKLISILQRLTNSGNTVVVIEHNLDVIKNADYLIDLGPEGGEKGGTIIAEGTPESYTGQYLKKML Coxiella_burnetii IQLRGVRTHNLKNIDLDLPRNQLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSMMEKPEVDVIEGLSPAIAIEQKSASHNPRSTVGTITEIYDYLRLLYARIGQPCCPLHHHALQAQTPEGTAVMLLAPVVRERKGGFIRARIDKKHTIEVVVDRRLAESFETCGYSLEELEPRLFSFNNPMGACPSCDGLGVQQYFDSLANGAILSSLAKHFGFPYSRLFEGIIPIMERYLTMSECETCQGSRLRKEARHVFLLPEITAMSIGNALQFFIAEKILKEVNARLGFLVNVGLNYLNLARSAETLSGGEAQRIRLASQIGSGLVGVMYILDEPSIGLHQRDNERLLKTLKRLRDLGNTVIVVEHDEDAIRTADYVVDIGPGAGVHGGEIVAEGSSLTGQYLSGKKTIPVPKKRRGARCNNLKNVDVEIPIGLMTCITGVSGSGKSSLISDTLYPIVASRLEYLDKVVEIDQSPIGRTPRSNPATYTGIFTPVRELFAGTPESRARGYLPGRFSFNVKGGRCEACEGDGVIKVEMHFLADIYVVCDVCKGKRYNRETLEIQYKGKNVYDVLQMTVEDAREFFPVIARKLQTLIDVGLSYITLGQSATTLSGGEAQRIKLSRELSKRETGRTLYLLDEPTTGLHFHDILQLLTVLHRLRDGGNTIVIIEHNLDVIKVADWIIDMGPEGGDAGGHVVVTGTPESHTGRFLKPVL Escherichia_coli IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHDVPLAAQTPEGKRLMLLAPIIKERKGGYIRARIDKKHTIEVVVDRRLAESFETCGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDSLAGGAILKSLADHYKFPWGSLFEGVLHNMERFISNRPCA?CEGTRLRREARHVYVLPAISDMSIGHAMEFFIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPSLTGQYMSGKRKIEVPKKRVGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV??ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPESHTARFLKPML Fusobacterium_nucleatum ITIKGARQHNLKNIDIELPKNEFIVITGVSGSGKSSLAFDTIYSEGQRRYVESLSAYARQFIGQMNKPEVDSIEGLSPAISIEQKTTNRNPRSTVGTITEVYDYLRLLFAHIGTAHCPICHTAVEKQSDDGSKIILLAPVVKDKKGGFVRARVNKKHNIEVVVDRRLTQSIETEDVSIPELNPRLFSFNAPYGACPECKGLGKKLEVDSIEDGGMFKAMAKVAKIPVKDLYEGAVKNLERYMVERICKVCNGKRLKDEVLAVTVIMEICDMSIKNSLDFFIAKEILKEIRERLTFMTNVGLDYLTLSRETKTLSGGESQRIRLATQIGSGLTGVLYVLDEPSIGLHQKDNDKLLATLNRLKELGNTLIVVEHDEDTMMQADKILDIGPGAGEFGGDIVAFGSSITGKFLSGKEAIDIPKKRRGAKGNNLKNIDVEFPLGVMTVVTGVSGSGKSTLINSTLYPILFNKLNALEKVINIDQTPIGRTPRSNPATYTKLFDDIRDIFAETQDAKLHGFKKGRFSFNVKGGRCEACQGAGILKIEMNFLPDVYVECEVCKGKRYNKETLDVYYKGKNIYDVLEMSVLEAYEFFPSLERRLKVLIDVGLDYIKLGQPATTLSGGEAQRIKLATELSKMSKGNTVYILDEPTTGLHFQDIKKLLEVLNRLLEKGNTVIIIEHNLDVIKTADHIIDIGVDGGENGGTVVATGTPESYTGKYIAKIL Geobacter_sulfurreducens IIVKGACEHNLKCIDVEIPRDKLVVITGISGSGKSTLAFDTIYAEGQRRYVESLSAYARQFLEQMEKPDVESIEGLSPAISIEQKTTSRNPRSTVGTVTEIYDYLRLLFARVGHPHCYECGKPITSQTPAGTRLQLLSPMVRGRKGGFARVIVDKKHDIDIVVDRRLADSLETCGISYPEMTPRMFSFNNPYGACPDCTGLGTRMYFDSIREGAILDALAKAFDFPFKELFEGVIPNLERYMNVMPCPTCQGARLKREALHVKVIRQVTALSIKDALEFFIARRILKEIRERLHFLVNVGLDYLSLDRTSGTLSGGEGQRIRLATQIGSSLVGVLYILDEPSIGLHQRDNGRLLQTLKHLRDIGNTVLVVEHDEETILEADHVLDMGPGAGEHGGRVVAQGTSLTGRYLSGELTIAVPKKRRGAAENNLKDVTVDIPLGVMTCVTGVSGSGKSTLVIDTLYKVLGQRLEQLDKVINIDQSPIGRTPRSNPATYTGVFADIRDLFAQLPESKVRGYKPGRYSFNVKGGRCEACAGDGIIKIEMHFLPDVYVQCEVCKGARYNRETLEVTYKGKSIAQVLDMTVSEALRFLPKVKAKLQTLEEVGLGYIRLGQSATTLSGGEAQRVKLAKELARRATGRTIYILDEPTTGLHFHDIAKLLEVLRKLVEGGNTIVIIEHNLDVIKTADYIIDLGPEGGDRGGEVIATGTPESYTGQYLRKML Gloeobacter_violaceus IHVQGARQHNLKNISLKIPRNQLVVITGVSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQLDKPDVDHIDGLSPAISIDQKSTSHNPRSTVGTVTEIYDYLRLLFGRAGKPFCPVCGLPIEPQTPEGTRFQLLAPVVRGKKGGFVRVRVDQSHTVEIVVDRRLADSLATHGSVMEELSPRMFSFNSPYGACPSCHGLGAIQEFSKPVSEAVLKSLGKQLGFPWHLLFEGVIPGLKRYIVSQPCAECKGTRLKPQVTAVKIILEFTSVPIDTCLGMLIAHEVLREIRARLQFLVDVGLEYLTLDRSANTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNERLLRTLFRLRSLDNTLLVVEHDEDTMRAADHLIDIGPGAGVHGGRVVAQGTSITGAYLSGRRRIETPAARRGASRNNLRSVDVEIPLGKFVCVTGVSGSGKSTLINEILYPYLKHHFAHLDKVIVIDQSPIGRTPRSNPATYTGAFDAIREIFSMTIEAKARGYEPGRFSFNVKGGRCEACKGEGVNVIAMNFLPDVYVQCDVCKGKRYNRETLQVKYKNKTIADVLEMTVEEACQFFPKAINKLETLRQVGLDYIRLGQPAPTLSGGEAQRIKLATELSRRSTGKTLYLLDEPSTGLSFYDVHKLLDVLVKLVDTGNTVVVIEHNLDMLRVCDWIIDLGPEGGRKGGQIVATGTPESYTGQFLRRVL Helicobacter_hepaticus IHITGARENNLKNINLSIPKNQLVVFTGLSGSGKSTLAFDTLYAEGQRRYIESLSSYARQFLDKVGKPDVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYFRLLYARVGKQHCHLCGDEISQMSPANAKMILLAPIVKEKKGGYVRAMVDKKHSIKVVIDRRIAQGVEKCKISFEELEPLGFSFNSPKGACEDCLGLGAKYAIDPLNKGGIFYAFCKSAKISFEELWKGIIQIAYDYTTERVCPTCKGHRLKLSSLSVKVIGELIDMPIEKVYEFFIAQPILKEIRERLFFLYDVGLGYLTLGRDARSISGGESQRIRIASQIGSGLTGVMYVLDEPSIGLHERDTLRLIKTLRSLQEKGNSVIVVEHDKETILNADYVVDIGPEAGLRGGEVVFSGNTLTAMYLKGAKIISYPHKRTNVNINNIHNLCTKIPLSQFVCVTGVSGSGKSSLILQTLLPVAQELLEYLDKVIYLDQSPIGRTPRSNPATYTGVMDDIRALFAEIKESKLRGYSVGRFSFNVKGGRCEKCQGEGEIKIEMHFLPDVMVKCDACKGAKYNPQTLEIAYKGKNIADVLAMSVDEALEFFPKIATRLQTLQDVGLGYITLGQNAITLSGGEAQRIKLAKELSRKDTGKTLYVLDEPTTGLHFADVDRLTKVLHHLVDLGNSVIVIEHNLDMIKNADYIIDIGPEGGSGGGKIIDSGSVESYTGKFLALEL Lactococcus_lactis IVIHGAREHNLKNIDVEIPRDKLVVVTGVSGSGKSSLAFETLYAEGQRRYVESLSAYARQFLGNMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLYARVGTPYCVNGHGKISAQSPEKTRLQILAPVVRTKKGGYVRVRVDKKHNIEIVIDRRLFDSVEACGFTVPELEPRLFSFNAPFGSCPDCDGLGVKLEPDTLREGAILEQAMEQFGIPWEKLFVGVIPNLWRYMTELTCTTCHGYRLNDQALSVKVIAEFSILSIGDTLDYVIAKPILKEIKDRLTFLKNVGLDYLTLSRSSGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIESLQKMRDLGNTLIVVEHDEDTMMAADWLIDVGPGAGDLGGEIIASGTSLTGQYLSGKRAIPVPEKRRGASENNLQNLDVEFPMGVMTAVTGVSGSGKSTLVNSILKKSLAQKLEGIERLIDIDQSPIGRTPRSNPATYTSVFDDIRDLFANTNEAKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCHGRRYNSETLEVHYKGKNISEVLDMRVSDGLEFFPKIERKLQTIVDVGLGYVTLGQSATTLSGGEAQRMKLASELQKRSNGKAFYILDEPTTGLHSEDIATLIQVLDRLVEQGNTIVVIEHNLDVIKTADYIIDLGPEGGAGGGTILAKGRPESYTGQYLKAKL Leptospira_interrogans IRIRGAREHNLKNINVDIPRDQLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMEKPDLDLIEGLSPAISIEQKTTHRNPRSTVGTVTEIYDYLRLLYARVGKPHCPECGTPIQSMSPQGSKLQILAPVISGKKGGFNRVRINFKTSIEIVVDRRLADSVETHDIGFTELSPRMFSFNSPYGACETCDGLGSLLEFDSLVDGCILKSLSDSLKFPWKDLYEGVIPNLQRYMTNHPCPSCKGKRLKRESLSVKVVDEFTSYSIEKALNFVIAKPILKEIHQRLSFLNDVGVGYLTLERSAGSLSGGEAQRIRLATQIGSRLMGVLYILDEPSIGLHQRDNTKLVSTLKNLRDLGNTVLVVEHDQETMEESDWLIDMGPGAGVHGGSIVCAGTSLTGKYLSGRLKVPIPAKLRGAKENNLKNIDVNIPLGKLVVITGVSGSGKSTLINDILYNAAAHKVENIDKIINIDQSPIGRTPRSNPATYTGLFTPIREMFAGLEEAKLRGYGPGRFSFNVSGGRCETCEGDGILKIEMHFLPDVYVTCEVCKGKRYNQETLEVRYKGKNIFDVLEMTVEDANQFFPIVKRKLETLLEVGLGYIRLGQPATTFSGGEAQRIKLATELSKRPTGKTLYILDEPTTGLHFEDVRRLSEVLHTLVDRGNSMIVIEHNLDVIKQADWIVDMGPEGGDGGGLVIAEGIPKSYTGQYLKKIF Magnetococcus_sp IIIRGAREHNLKNIHVEIPRNALTVITGVSGSGKSSLAFDTLSAEGQRRYVESLSAYARQFLSLQNKPDVDAIEGLAPSISIEQKSTSKNPRSTVGTVTEIYDYLRLLYARVGRPYCYGCGRPIESQTPERTRLLLLAPIVQGRKGGFTRVVIDVKHSIEILVDRRMADSLETCNISYPEIEPRLFSFNNPFGACPSCDGLGTQEFFDSLREGAILYTLAEHFEIPWQALWEGVIHTMERYRNATPCTACQGKRLRKEALHVKVLAEFTALPLREAQRAIIAERILKEVTDRLNFLIAVGLDYLTLDRTAGTLSGGESQRIRLANQIGSGLVGVLYILDEPSIGLHQRDNQRLLDTLVRLRDLGNTVVVVEHDEDAIRTADYVVDMGPGAGEHGGQVVAAGTSLTGHYLNGQQTIPVPQQRREVSTHNLQCVTTHIPVGLLTCITGVSGSGKSSLVLDTLYPALAQRLSQLDKVIHMDQSPIGRTPRSNPATYTGLFTPIRELMAATEEARARGYKSGRFSFNVKGGRCEACAGDGLVKIEMHFLPDIFVQCDVCHGARYNRESLEVHYKGKNIAEILNMTIEEALAFFHALRGRLQTLMDVGLSYMRLGQSATTLSGGEAQRVKIARELSKRSTGKTLYILDEPTTGLHFDDIRKLVEVLQRLVEAGNTVVVIEHNLDVIKTADWIIDLGPEGGSHGGQILIEGQPESWTGRYLKPFL Parachlamydia_sp INLQGCKEHNLKNLSVQLPKHAITVITGVSGSGKSSLAFDTLFAEGQRRYLEYLSPQARPWIKQMPKPDVDLIEGLSPTLAIGQHRQPLYFYGTVATYTDLYDFLSLLYAKVGDQYSPATGKKLSRFTSAGSRLQLIAPIK?LVKEGFIRMRINISN?LEVVVDRRLAPSVETTGFSFAPLEAGDFNFNSPKGACAACNGLGGREQVNPLLDQ?ILKALWKILNLFIKDIWKGLIPVLNEFIDWQTCSSCLGGRLKPESLACLIIYQLCSLTVAECLIKIIVKEILPHIQSRLEFLDQVGLGYLTLTREGKTLSDGEAHRIQLASQIGAKLSGIIYILDEPSLGLHRQDIQHLHKVIHELKALGNTVVIVEHEKSLIQQADYILELGPGAGSLGGQICFQGTSLTGKWLSGKLSLPIPP?RRGATLNNLNDFSANIPLGCFVGFCGVSGSGKSTLVLDIIGQQLKNFLQTIKRLISHEKQTDRLSARSIPATYIGIMTPLRQLFAETRLAKARGYTASRFSLNKRGGRCEACEGLGYIEVNMHLMPDFFMPCDICQGLRYNYETLQITWENKNIADILRLSALESFQLFPSLAPTLELMTELGLDYLQLGQPFNTLSGGEIQRLKLIADLAGKTQEKTLYILDEPSSGLHLQDIEKLVKILHKLVEKGHTVFVIEHHLDILYQADWLIELGPEGGPKGGRLIFEG?PSTPTGKVFSQFN Pirellula_sp IRIRGARVHNLRNLDVDIPRDAITVISGVSGSGKSSLAFDTLFAEGQRQYIDSLSTYARQYLDAIPRPDVDWIDGLAPTLSIDQKSGSHSARSTVATITEIYDYLRLLYARVGVPHCVACGSTISTQTPDRTKLTLMSPMVRGRKGGLVRARVDKNHTIEAIVDRRLDESTRLCGESFEELEPRTFSFNSPYGACPACQGLGKVAVRG????????????????????????????????????VTCSTCEGGRLKAESLAVTIIDAMCRMPLPDAQSWMVAAPIQSEVVRRIDFLRRVGVDYLTLDRSAETLSGGEMQRVRLATSIGSGLVGVCYVLDEPSIGLHPADHHRLLAAIKELQTAGNTIVIVEHDEDTIQAADHVIDIGPGAGRHGGRLVSQGTSPTGAYLSGRSKIGLDRPRRGATLNNLQNVTAKIPLGCLVGVSGVSGSGKSSLIVDTLYPALAAKLQHIDKLVPIDQTPIGRTTRSCPATYAGVMDPIRQVYASTREAKTLGFAANRFSFNSPAGRCDVCKGNGFERIEMNFLSDLLIECSRCGGKRFNRQTLQVRFKGATIADVLGMTIDAAQEFFPKVHHLLASLVDVGLGYVTLGQSSTTLSGGEAQRIKLATELARPATGKTFYVLDEPTTGLHFADVQRLLVVLDRLVEAGNTVLVIEHQSDLLAACDWLLDLGPGGGSQGGHLIAEGPPESATGKFLRLR? Rubrobacter_xylanophilus ?????????????????????MLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPEVDHIDGLSPAVSIDQKTTSNNPRSTVATVTEIYDYLRLLYARAGRPHCHVCGFPVARSTPERTRFMVLAPVVRGRKGGYARVRVDRKHDIEVVVDRRLTDSIETCGASIAEIQPRTFSFNSPHGACDRCDGLGSRLEIDSVNEGAILAALSEKYGIPWRELFDGVIGNLERYMSHVPCPKCGGARLRPEALAVTVIYEFTQMSVTEAQSFFIAERVVKEIRERLGFLVDVGLGYLTLSRAAGTLSGGEAQRIRLASQVGSGLVGVLYVLDEPSIGLHQRDNRRLLNTLLRLRDLGNTLIVVEHDEETIRTADHIVDVGPGAGVHGGEIVAQGTSVTGDYLSGRRRIEPPGERRGASEHNLKGVDVEFPLGVFTCVTGVSGSGKSTLVNEILYKALANRVEQLDKVIDIDQSPIGRTPRSNPATYTKVFDHIRALFAATPEAKIRGYKPGRFSFNVKGGRCEACRGDGQIRIEMHFLPDVYVPCEVCKGRRYNAETLRVTYKGRSIADVLEMTVEEACEFFPAISRRMQTLRDVGLGYIRLGQPATTLSGGEAQRVKLASELGKRATGRTLYILDEPTTGLHFADVERLLGILHRLVDAGNTVIVIEHNLDVIRSADYIIDLGPEGGDGGGEVVAAGTPESHTGRFLRGLL Sinorhizobium_meliloti ISIRGAREHNLKGIDLDLPRNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYLRLLFARVGVPYSPATGLPIESQTGEGTRLYMLAPLVRGRKGGFQRVKVDYKHDIDVVVDRRLADSIETSGFTIPEIEPRLFSFNNPFGACTTCDGLGSQQKIDTLRDGAILEALGTVFGFRWSELFEGIVPNLERYMSAAPCPACAGYRLKPEALAVKIIGEVSEMSIRAARDWFIAVRILKEIRERLRFLNDVGLEYLSLSRNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNARLLDTLRHLRDIGNTVIVVEHDEDAILTADYVVDIGPAAGIHGGEVIAEGTSLTGKYLSGELSVAVPGERRGARANNLKNVTASIPLGVFTAVTGVSGGGKSTFLIETLYKAAARRVEHIDKVIDIDQSPIGRTPRSNPATYTGAFTPIRDWFAGLPEAKARGYQPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCDVCHGKRYNRETLDVHFKGKSIADVLDMTVEEGVEFFPAVRDKLVTLNQVGLGYIKIGQQANTLSGGEAQRVKLAKELSKRSTGRTLYILDEPTTGLHFHDVAKLLEVLHELVNQGNSVVVIEHNLEVIKTADWIIDFGPEGGDGGGEVIAQGTPESYTGQFLKELL Synechocystis_sp IRIRGARQHNLKNVNLDLPRDRLIVFTGVSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQLDKPDVDSIEGLSPAISIDQKSTSHNPRSTVGTVTEIYDYLRLLFGRAGSPHCPHCQRNIAPQTPDRTKFQILAPVVKGKKGGFVRVRINQAHTIEIVIDRRLVDSLSTHGAVMDELSPRLFSFNSPYGACPDCHGIGFVRSFCKPVYVAILYSLGQHFDFPWKKLFAGALNILQKYIINQPCHTCGGKRLKPEALAVKLINNLTSVPIRQTLERIIGELALKEIKARLQFLLDVGLDYLTLDRAAMTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNNRLLATLTKLRDLGNTLIVVEHDEDTIRHADYIVDIGPKAGIHGGEIVCQGDSLTGAYLSGREAIATPEERRGCCHNNLRNIDVTIPLGKLVCVTGVSGSGKSTLVNELLHPALQHYLQAIDKVIVIDQSPIGRTPRSNPATYTGIFDSIREIFTQTIEAKARGYKPGQFSFNVKGGRCEACAGQGVNVIEMNFLPDVYVQCDVCKGARYNRETLQVKYKGHSIADVLAMTTEEALTVFPRAVNRLQTLVDVGLGYIKLGQPAPTLSGGEAQRVKLASELSRRATGKTLYLIDEPTTGLSFYDVHHLLNVLQRLVDKGNSVLVIEHNLDVIRCSDWIIDLGPEGGDRGGKIMVAGTPESYTGKYLAKVL Thermoanaerobacter_tengcongensis IVIKGARVHNLKNIDVEIPRDKLTVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDYIEGLSPAISIDQKTTTKNPRSTVGTITEIYDYLRLLYARVGTPHCPICGREITMQTPEGTRIQILAPVVRGRKGGYVRVKIDKKHTIEVVVDRRLTDSIETCNVSIEELSPRMFSFNSPYGACPVCMGLGEFMKVDSLATGVFMLRVIEYFGYPYEEFFEGIINNLERYMRPVTCPACNGARLKPEALAVTVIKEMTDLTIGELLKFIIARPILKEIKARLNFLVDVGLDYLTLSRPASTLSGGEAQRIRLASQIGSGLVGVTYILDEPSIGLHQRDNQRLINSLKRLRDQGNTVIVVEHDEETIYAADYIIDIGPGAGEHGGEVVVAGTSLTGQYLSGKIKIEVPEKRRGAKENNLKNIDVEFPLGVFICVTGVSGSGKSTLVNEILYKALAQKIEHIDKVINIDQSPIGRTPRSNPATYTGVFDYIREVFANTPEARMRGYKPGRFSFNVKGGRCEACGGDGIIKIEMNFLPDVYVPCEVCKGKRYNRETLEVKYKGKSIADVLDMTVEEALELFPRIKNKLMTLYEVGLGYIKLGQPSTQLSGGEAQRVKLATELSKRPTGRTLYILDEPTTGLHFADIHRLLNVLNKLTDAGNTVIVIEHNLDVIKSADYIIDLGPEGGDRGGMVIATGTPESYTGWFLRKVL Thermobifida_fusca LVIRGAREHNLKNVSLELPRDSMIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQMDKPAVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLWARIGKPHCPRCGRQIAPQTPEGTRFQVLAPVVRGRKGGFTRARVDETHDIAVVVDRRLADSVETDDLSFEELEPRSFSFNSPYGACPECTGLGTRLEVDTLAEGAIMQALGEAMGFPWEKLFEGVVNWIRRYMRVVPCPACQGSRLKPEALAVTVIAEVSAMPLGECADFFIAAQVLKEINARLGFLLDVGLDYLTLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNFRLLETLQRLRDLGNTLIVVEHDEDTIRVADWVVDIGPGAGEHGGQVVVSGTSITGQYLSGRRTIPVPEKRRGARENNLRDIDVAFPLGVFTAVTGVSGSGKSTLVNEILYKALAKELHLVDKVVHVDQSPIGRTPRSNPATYTGVFDHIRKLFAQTTEAKVRGYQPGRFSFNVKGGRCEACAGDGTIKIEMQFLPDVYVPCEVCHGARYNRETLDVHYKGKNIADVLDMPITEALEFFSAIRRHLQTLHDVGLGYVRLGQPATTLSGGEAQRVKLATELQRRSTGRTVYILDEPTTGLHFADIEKLLNVLGRLVDAGNTVIVIEHNLDVIKTADYLIDMGPEGGSRGGTVVVTGTPESHTGHFLRAIL Thermotoga_maritima IVVKGARVHNLKNITVRIPKNRLVVITGVSGSGKSSLAMDTIYAEGQRRYLESLSTYARQFLGNLKKPDVDEIEGLSPAIAIDQKTVSHNPRSTVGTVTEIYDYLRVLYARIGKAHCPECGRPLEKKSKEGSRIYILAPVATEKKGGFARIEIDKRHTVKLVVDRRILDSLELCGIGFPEITPKLFSFNSPYGACPNCHGLGFTFEVDSVLEGAIVAREIEKRGVPFKDLFEGVVPKVQRFIVQRTCSVCGGRRLNREALSVKIIHEFTELSISEELEFLIVGELLKEIEKRLEFLVDVGLEYLTLSRSATTLSGGESQRIRLATQIGSGLTGVIYVLDEPTIGLHPRDTERLIKTLKKLRDLGNTVIVVEHDEEVIRNADHIIDIGPGGGTNGGRVVFQGTSLTGEYLSGKRKITVNKTRRGVRHNNLKNIDVEIPLGVFVCVTGVSGSGKSSLVMETLYPALMNLLENIDKMIAIDQSPIGRTPRSNPATYTKVFDEIRSLFAMTPAAKARGYNKSRFSFNLKGGRCEACQGQGYVKIEMLFLPDVYVECDVCKGKRYNRETLEITYKGKNISDILDMTVDEALEFFPSIKRTLQVLHDVGLGYVKLGQPATTLSGGEAQRIKLASELRKRDTGRTLYILDEPTVGLHFEDVRKLVEVLHRLVDRGNTVIVIEHNLDVIKNADHIIDLGPEGGKEGGYIVATGTPESYTGRFLKNVL Treponema_denticola LIVKGAREHNLKNIDVELPRDKLIVISGLSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGRMDKPDVDYIEGLSPAISIEQKTTHRNPRSTVGTVTEIYDYYRLLFARTGHAHCPSCGKEIKEQTPEGTRVQILAPIIKGKKGGFVRARIDKKHTIEIIVDRRLSESVETCGISMPELQPRLFSFNNPIGACPECTGLGMTQHFDSFNEGVFFEALAAQFDFPLNKLWPGIMADMNRFMSIKPCKTCGGMRLKPEVLAVTVIHDLTCLSVGDSIEFFIAFQILKEIKARLEFMKNVGLDYLTLERKAATLSGGEAQRIRLATQIGSSLIGVLYILDEPSIGLHQRDNQRLIDTLLYLRNLGNTLIVVEHDEQTLRTADYIVDLGPGAGVHGGNITAQGTSLTGQYLAGTLKMDIPKERRGVSEHNLKDVSIKIPLGAFTCITGVSGSGKSTLLTDVLYPAVSNKIEHIDKVINIDQSPIGRTPRSNPATYVGVFTGIRDLFASLPESKARGYKPGRFSFNVRGGRCEHCQGDGTLTIEMNFLPDVYIACDVCRGKRFNKETLDVRYKGKNIADVLDMTIEEASEFFPHIARKLQTLLSVGLGYIKLGQSALTLSGGEAQRVKLANELAKRSTGKTLYILDEPTTGLHFADVKQLMQVIHRLIDQGNTVIMIEHNLDVILQADKIIDLGPEGGTNGGQIIAEGTPESYTGYYIKEML Zymomonas_mobilis ISIRGAREHNLKNVSIDIPRNKLVVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDHIEGLSPAISIEQKTTSKNPRSTVATVTEIYDYMRLLWARVGIPYSPATGLPITAQTPEGSRLHLLAPVVRGRKGGFSRLRIDRKHDIEVVVDRRSAQSLETSGFTIPEIEPRLFSFNAPQGACPACDGLGEKPYFDSLAKGALLSSLARYYDFPWKKLFEGVIRNLERYQSAAPCEVCHGARLRPEALAVLIISDVTKMTVKPALEFFIAERILKEIIERLGFLDNVGLDYLSLDRSSGTLSGGESQRIRLASQIGSGLSGVLYVSDEPSIGLHQRDNDRLLETLKRLRDLGNSVLVVEHDEDAIRLADYVVDMGPGAGVMGGKVIAAGSSLTGAYLSGRREIAVPDKRRGATANNLQNVTASIPLVTFTCVTGVSGSGKSSLILDTLYTAAARELEHLDKVIDIDQSPIGRTPRSNPATYTGAFTAIREWFAKLPEAQARGYKAGRFSFNVKGGRCEACQGDGVKKIEMHFLPDVYVTCDVCHGARYNRETQEVKFKGQSIADVLNMTVDQAAEFFPSIRDKMAMLARVGLGYIKVGQQATTLSGGEAQRVKLAKELSKRATGRTLYILDEPTTGLHFEDVRKLLEVLNALVDQGNSIVVIEHNLDVIKTADWLIDLGPEGGTGGGQIIAAGTPESYTGHYLKRML ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M986] TITLE DLIG; LINK TAXA = Taxa5; DIMENSIONS NCHAR=430; FORMAT DATATYPE=Protein SYMBOLS= "A C D E F G H I K L M N P Q R S T V W Y" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .] Agrobacterium_tumefaciens LAAELARHDALYHGKDAPEISDADYDALKRRNDAIEAAFPALVRADSPSKKVGFAPIVHARPMLSLDNTFEPKIDGLSMSIRYENRLKTAATRGDGTTGENVTANIRTIIPNELEVRGEVYMAKSDFLALNYVNPRNTASGSLRQLDANVTAKRKLRFFAYRPDLDYDIDGVVYKVDRLDLQERLGFRSRSPRWATAHKFPAEQAFTTVENIEIQVGRTGALTPVALTPITVGGVVVTNATLHNADYIIRIGDTVIVQRAGDVIPQVLDVPEKCPVCHFVSRNAFDIEGLGTKQIDFFIKTAPDIFTLVSVKKLFDAIDARRLHRLIFALGIRHVGETTAKLLARSYLNSIDGIGEVVARAIIEFYLIRELGKTVVFTGSLRDEAKARAESLGAKVAGSVSKKTDILVAGPGAGSKLAKATELGVQTMDE Aquifex_aeolicus LREVIRYHDYKYYVEANPVIPDYDYDRLFRALKEIEKKYPELITPDSPTQRVAFPTVKHYTPMLSLDNAYEPKLDGAGIALVYENDFVRGATRGDGEYGEDITNNLKTIIPLKAEIRGEVVIRKDEFQKLNFANPRNAAAGSIRQKDPKEVAKRNLEAIVYRDSYPYEIDGMVVKVNDRRLWKVLGYTSHHPRWAIAYKFKPRRAVTKLVDVVFQVGRTGTITPVGLEPVELGGVTVSSVSLFNEDFIIRIGDWVVVERAGDVIPYVVEVPKYCPSCHWASRDAMDIRGLGDATIKLLAKDVGDLYYLKSAMNLLKAIEESKLDRVLYGLGIRYVGQTTAKKIAEIILMRLEGIGYKVARSIKEFFLEKAGGKTFVFTGTLREKAGEIVEMLGGKFSNSVTSKTDYLVVGKDPGTKLSKAKKYGVKTITE Bacillus_subtilis LRRTINKYSYEYYTLDEPSVPDAEYDRLMQELIAIEEEHPDLRTPDSPTQRVGFQKVTHGTPMLSLGNAFELKIDGLAVSLRYEDGFVRGATRGDGTTGEDITENLKTIIPLKMEVRGEAYMPKRSFEALNFANPRNAAAGSLRQLDPKIAAKRNLDIFVYRADLPYEIDGIVIKVDSLDQQEELGFTAKSPRWAIAYKFPAEEVVTKLLDIELNVGRTGVITPTALEPVKVAGTTVSRASLHNEDLIIRILDKVVVKKAGDIIPEVVNVPTECPECHFVSRNAMNIDGLGERVITQLVRNVADLYKLKSTENLISSIQKSKLERLLFGLGIRFIGSKAAKTLAMHFLLAVDEIGEKMADAVITYFLQELGGKTIVLTGKLRNEAKAQIEALGGKLTGSVSKNTDLVIAGEAAGSKLTKAQELNIEVWNE Bdellovibrio_bacteriovorus LKKIISEHDHNYHVLDKPTITDYEYDQLFAELLDIEKNPKGLDLSDSPSQRVGFTKAQHRLPMLSLANSYELKFDGLSMELIYENGLVRAITRGDGTVGEDVTHNIKTIIPLKLEVRGEVLMFKEDFARLNFANPRNAAAGTVRQLDSRIAASRPLRFFGYRPKLPFDIDGVVIKVNSLRLQEDLGLVARSPRWATAAKFKPEQAQTTVEDIVVQVGRTGALTPVAMKPVKVGGVTVTNATLHNQDEIIRIGDTVIIQRAGDVIPEVVEVPERCPACHFVARRAMNIDKVGDRLIETLLTRFSDFYRLKSADNIIKSIENSKLARFIFALGIRFVGEQTGKHLADHFLLQVPEIGAKVAKSIRDWTMIELGGMSFLITGTLRDDAKDLIERNGGKILGSVSSKLNYLVVGDDPGSKVEKAQGLGVKIISW Bifidobacterium_longum VAAWVESDQIAYYIDDSPVSSDAAYDARMRCLERLEAAFPSLDNPQSPTHRVGFTSVRHPSRMMSLDDVFEVKIDGLALNLIYRNGLEQGLTRGDGVTGEDITLNVRTIIPANLEIRGEVFMRWDDFHTLNFANPRNAAAGSLRQKDPRITATRRLSFYAHRGDIEHALDGIVVKVDDLGLQRTLGATSRAPRWAIAYKYPPEEVNTELLNITVQVGRTGRVTPVALKPVYVAGSTVARTTLHNGFEVILIGDTVVVRKAGDVIPELVGPPEFCPSCSLASRKAFDIEHLGEQSAIALLSNESGLFNLENTRKMFDEMDKARLWRVLVALSIRRLGPPTARLIASAMLTAIDGVGPEIAESVVNWFWQAAGGKTVVVTGSLRDSAKEAIIERGGKAAGSVSKKTDYVVIGANAGSKAAKAEELGIPMLSE Borrelia_burgdorfer LKKLIRKWDKEYYVDSLPSVEDFVYDKHILRLQELESKYPEYKTLDSPTLKFGFKEVEHSAPILSLDKVYEPKIDGCSIVLYYKDGLEKALTRGNGKFGNDVTINVRTIIPLFLVLRGEVYITKENFLKINYTNSRNLASGILRRVDSREVANFPLNIFIYRDSFEYEIDGVVLKVSDFALRERLGYTAHHPKWAMAYKFEALSGFSRVNSIVVQVGRSGKITPVAIDKVFVSGAFITSATLHNQDYILNVGDVVKVSRRGDVIPAVEMVPDNCPACYFCSKNCMDIEGFSDKIISFLIFSEIDLYTFRKINNLINSIEASKFSKLLLSMGIKDLGENTIRLLFLNNLLKIKGIGEKIALNIIEAFFENLEGKKFCITGTFRSIIIDKLKNKGAIFNTCVTGSLDFLIVGEKAGSKLKKALSLNIKIMSF Buchnera_aphidicola LRKILLKYEYFYHTLNQSIISDAEYDYLFRQLYELELKNKELIPSDSPTQKVGFKKIKHFSPMLSLENTFELKLDGVAISIIYEEGFVRAATRGDGFEGENITSNARMIIPLKLEIRGEVFMLKSNFIKLNFSNPRNAAAGSLRHIDPNITAERKLIFSCHRNFLDFDIDGIVIKVNSLELQKKIGSTTKSPRWAIAFKFSPKERITTLNDVKFQVGRTGVITPVAFNPVYISGVMISKASLHNKNEILHFNDTITICRSGDVIPRLLNVPSFCPVCHFFSKKSLYVVGLGPKIINELVKNPIDFFYLRKSIKIINSIKKCKLKCFIYALGIPGVGEVVAGKIANYFLNCISGVGKIISNNIFNYFLIKQANKKIVLTGVFRIELKTILLSLGAKISNNISRKTDFLIYGNNFGSKFFRAKDLDVKIINQ Burkholderia_cepaciar LRDQLERANYAYYVLDQPDLPDAEYDRLFRELQQLETDHPELVTPDSPTQRVGFTPVVHDAPMLSLNNGFELKFDGLAISLRYEQGFVQASTRGDGTTGEDVTENVRTIIPLKLDVRGEVLMFKRDFARLNFANPRNAAAGSLRQLDSKITAQRPLSFFAYRESLPYDIDGVVYKVNRRDEQERLGFVSRAPRFALAHKFPAQEALTKLVAIDVQVGRTGAITPVALEPVFVGGATVTNATLHNEDEVIRIGDTVIVRRAGDVIPEVVGAPTECPVCHFAQRRALDIDGLGEKIIDQLVRTPADLFNLKSAQNLLDSLEKAKLARFIYGLGIRHVGESTAKDLAKHFLLEVNDVGPIVAESLHQFFLRAPGGKTVVLTGTLRDAAKEMLEAAGAKVAGSVSKKTDYVVAGAEAGSKLVKAEELGIPVLDE Campylobacter_jejuni KVALANLWMRAYYEKDEPLASDEEYDALIRELRVFEEQNKDEISKDSPTQKIAFKKIAHLKRMWSMEDVFEPKFDGASLNLLYENGLVSGATRGDGEVGEDITLNVFEIIPKNIEIRGEVVILKDDFEKINFANPRNAASGSLRQLDTSITKERNLKFYPWREKKPMMMDGMVVRVDDLALCEELGYTVKFPKFMAAFKFPALEKTTRLIGVNLQVGRSGVITPVALEPVNLDGVVVKSATLHNFDEIVKINDFVSVIRSGDVIPKITKVPKLCPTCHFVSKKCLNIDGLGENIVELLITTLESIFHLKKINNLLNAIEQARLFRFITALGIEHIGEVAAKKLSLSFYANLEGFGEQMALSLCEFTK???IGKTFVITGTLRDEFKALIEKLGGKVSGSVSKKTDYVLFGEEAGSKLSKAKELEVKCIDE Chlamydophila_pneumoniae LCRELEDHDYSYYVLHRPRISDYEYDMKLRKLLEIERSHPEWKVLWSPSTRLGFSVVSHKEPMLSIANSYELKIDGIAVAIRYEDRLVQALSRGNGKQGEDITSNIRTILPLRLEVRGEVFFSYSTFQIINFANPRNAAGGTLKLLSPQEVAKRKLEISIYRASLPMEIDGAVIKVDSLASQRVLGATGKHYRWALAYKYAPEEAETLLEDILVQVGRTGVLTPVALTPVLLSGSLVSRASLYNEDEIIRIGDTVCVAKGGEVIPKVVRVPEFCPVCFFVGRGALNIDHLGVKVITKLVHTCADLFQLRSARNILESIEQAKLDRFLVALGIPLIGIGVATVLAGHFLLSLEGIGEKVAHAIAEYFMQDLGGKAFVITGTLRLDAETAIRNCGGKVGSSVSKQTDYVVMGNNPGSKLEKARKLGVSILDQ Chlorobium_tepidum LRAEIERHNRLYYLEAKPEISDFEFDKLLKRLIMLEKEFPELVTPDSPSQRVGFPTVVHRDPMLSLSNTYELKYDGVAISLLYRDGLVCGSTRGDGRQGDEITANLRTIIPLRLEVRGEVYMRKDDFERLNFANPRNATAGTLKLQDSAEVARRRMSFVAYRWTLPYETDGVVLKLNEVSLWERLGATAKSPRWAIAYKYPAQQAKTVLQGVVFQVGRLGTITPVALKPTRLAGSIVSRSTLHNFDEIVRIGDHVMIEKSGEVIPKVVSVPSECPVCHFASRNALDIQNLGESLVTQLVSDAGDLYSLKSAQNVLDALEKSKYARLLFALGIRHVGAATARELAHACLAAVPDIGPVIAASIRDFFLAEAGGQSVIFTGALRQEAEEMVRERGGRIVSSVSKKTTLVVAGKEAGSKLEKAIKLGVKVIDE Chloroflexus_aurantiacus LRSLIRRYDYHYYVLDDPIVSDAEYDALMTELRALEAAHPELITPDSPTQRVSFAKVQHPQPMLSLGNAFEPKIDGLAVALTYRDGLVQGATRGDGEVGEDVTANLRTIIPLTLEVRGEVYMRTADFETLKFANPRNAAAGSLRQKDPTITAARPLRFFAYRDDLPYEADGVVIKIDDFAQQRELGVVGRDPRWAIAFKFPAREAITRLLDITVNVGRTGVVTPNALEPVQIGGVTVRNASLHNADYIIRIGDYVIVKRAGDVIPYVVGPPTHCPACHFVSRSALDIVGMGERQAELFIRDVADIFFLKRIANLLAAIDAARLDRLLVGLGIRYVGTVAAQTLVAALLEQIPGIGPVVAASIVDFFLRAAGGKTFVLTGTLREQASALIVAHGGKVTDSVSKKTSYVVAGANAGSKLAKALQLGIPVIDE Chromobacterium_violaceum LRELLNRYGHEYYVLDAPTVPDAEYDRLFRELQALEEAHPELAVSDSPTRRVGFVSVVHAVPMLSLSNAFEPKFDGLAISLLYENGLTRAATRGDGVAGEQVTENVRTIIPLKLEVRGEVLMLKRDFERLNFANPRNAAAGSLRQLDSRITAQRRLSFFAYRAGLPFEIDGVVYKVNRRDQQEALGFVSRAPRWAIAHKFPAEEALTCVEAIEEQVGRTGAITPVALKPVFVGGVTVTNATLHNEDEVVRVGDTVVVRRAGDVIPEVVSVPTACPVCHFAGRRMMDIDGLGERYIDKLVQGVADLYRLKWAENLIEAIDASRLARLLFALGIRHVGESTAKTLADWLFAALPDIGGVVADSLADFFLL?AEGKTLVLTGTLRDQAKALIEAAGGKVSGSVSKKTHYVVAGEEAGGKLAKAQELGVAILDE Clostridium_perfringens LVEELNKYAYEYYVLGNSSVTDKDYDKKYYELVDLEKET?GYKLPYSPTQRVGFKKYTHKARLWSLDKAQTKKFDGLTINLSYDENLVTGATRGTGAIGEDVTAQVKTIIPLKIEIHGEAIMTTEAFEKYNLKNLRNGAAGALRNLNVAETAKRNLSAFFYRFDLNYDIDGLVIAIDDIRTRDLLGYTVKFPKWAIAYKFEAQEATTKLLDVEWNVGRSGRVSPTALEPVELAGVTVKRATLNNMDDIVRLGAEVFVRRSNDVIPEIMGVPKVCPACHFAGREAMNIAGFSEKTAEQLIRDISDLYKLKKAQNLLDAIEKSKLEAFLYSLGIPNVGVKTAKDLVKRFLVSVQDVGDIVARSIIEFFLLSLGGKTVVVTGTLRTSIKEKLESLGAKVSGSVSKKTDFVIAGEAAGSKYDKAKSLGVTILSE Desulfovibrio_desulfuricans LRTLLEYHGHRYYVMDEPEISDAEYDALFRELVRLEEEHPEHIHPGSPTHKVGLKPREHSLRMYSLDNAFDPKMDGLAMELVYENGFLLAVTRGDGSMGEDVTHTMRTVVRMRLEVRGEVIITRADFEALNFANPRNAAAGSVRQLDSSVAAARPLRFMAYRHELPFEIDGVVAKLNDLDLQEALGFTARAPRWAIALKFPAHQARTRLKDIRIQVGRTGVMTPVALEPVTVGGVTVSSATLHNEDEILMLGDVVIVQRAGDVIPEVVRAPAVCPVCHFVSKAGLDIDGVGRKWIEQLVVSPADLFRIKLASNFIEAFDSARLQRFICALGIRHVGEQTARTLAARFLQSLRDIGGEVAGSIRAFFFKNLGGKKILFTGSLRSEAKAMAEKAGAAVMSGVSARLDILVAGDKPGSKLEKARSLGITVLTE Escherichia_coli LRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGFSQIRHEVPMLSLDNVFELKLDGLAVSILYENGLVSAATRGDGTTGEDITSNVRTIIPLKLEVRGEVFLPQAGFEKINFANPRNAAAGSLRQLDPRITAKRPLTFFCYRPTLGFDIDGVVIKVNSLEQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVALEPVHVAGVLVSNATLHNADEILRIGDKVVIRRAGDVIPQVVNVPTYCPVCHFVSRRAMDVDGMGDKIIDQLVHTPADLFKLKSAQNVVNALEKAKFARFLYALGIREVGEATAAGLAAYFLQKVPDVGIVVASHVHNFFLLAEGGKTVVLTGSLRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDE Exiguobacterium_sp LRQKLNQYSYEYYVQDQPTVPDSTYDQLLRELTELETAHPELITPDSPTQRVGFEKVTHDLPMLSLGNVFELKFDGLAISLKYEDGLVRGATRGDGTVGENITQNLRTILPLRLEVRGEAYMPKQSFERLNFANPRNAAAGSLRQLDSSITASRNLSLFVYRSNLPYEIDGIVLKVDRYDDQEELGFTAKSPRFATAYKFAAEEVMTTVEEVDFSVGRTGKVTPRAFAPVVVAGSTVSYATLHNADFIIRLHDQVIIKKAGDVIPAVVSVPAHCPACHFVSRQAMNIDGLGEKVVRQLIRTLADLYRLTSVDNLLTAIEASKLERLMFGLGIRLVGQKAAYLLAERFILAIDGIGSKIADSVTKYFLAELGGKTIVLTGTLRSEAGKRLELLGADVTGSVSKKTDILVAGEKAGSKLTKAESLGIEIWNE Gemmata_obscuriglobus LRKQLDHHNYLYYVEAAPVISDREFDTLLKELADIERANPGLVTPDSPTQRVGFKQVTHKTPMLSIDNSYELKIDGVSMSLTYENGLAFAATRGSGTVGDDVTHNIKTIIPLKLEVRGEVYMTRGELARINYKNARNLTAGTLKLKDPRECATRKLAFFAYRKELAYDTDGIVVKVNDWAQRERIGYTAKVPKWAKAYKFEAEQATTKLGKVVFYLGKFGELTPVADPPVQLAGTTVTHASMHNASWVVRIGDTVVVEKKGEIIPQVVDVPDKCPKCGFAKKTRMEIDGLGREVAVQLVKSVADLYRLKKAQNLLDGIAASKLARLLPGLTIYMVGEAMSDLLVEEFLARVKGFGPKRAQFVRAFFLKQFGGKTVVVTGTLRIGIEQAIKDAGAKASGSVSKKTDFVLVGDKPGSKADKAKELGVKIINE Geobacter_sulfurreducens LRTELERHNRLYYAEDRPEITDAEYDLLFRELVDLETRFPDLAAPDSPTQRVGFEQVTHRIPMLSLENAFEPKMDGLAVELVYERGLTVGSTRGDGVVGENVTHNLKTVIPLRLEVRGEVYLPLAAFQRLNFANPRNAAAGSIRQLDSRITARRPLAIFCYRDSLPYEIDGVVVKVDSFALQRELGEKSRSPRWAVAVKFPPRQAVTVVEDIVPSVGRTGVITPTALRPVEVSGVTVSRATLHNWEEMIRIGDTVVIERAGDVIPAVVKVPAVCPECHFASRDAMDMEGLGEKYIEQLVKNVADLYTLKLAENLLNAIEASKLSRFIFALGIRHVGEHTAKLLAGAFLLSIREVGPQVARSIITFFMFKAGGKTFVFTGALRPEAQKMVEKEGGHAAGSVSKKTDYVVAGAEAGSKLDKARQLGVRVLTE Gloeobacter_violaceus LRALLHRWGYAYYVLDAPEVSDAIYDQHYRELVDLESRYPELVSPDSPTRRVGFVSVTHRVPMFSLENAFELKIDGSATALSYEDGLVRGATRGDGVEGEEITQNLRTIIPLKLEVRGEAFIPRDEFERINFANPRNACAGTLRQLDSRVVASRRLGFFAYRHELPYDTDGVVVKVNAFDHQREVGFTSKFPRWAIAFKYPAEEKSTVVEAIAVQVGRTGALTPVALQPVAVAGTTVSRATLHNQDRIVRVGDTVIIRKAGEIIPEVVRVPQTCPECHWCA??ALEIDGIGDKLIARLVHTVADLYELRSAAKIVEQLDRSHWSRVLYGLGLRHIGASVSVELARAFIASLYGFGEELARSVVEWFLKAHGGLTFVITGTLREECTALIESHGGKVTSSVSSRTSYVVAGEKAGSKLARAQDLKVAVLDE Helicobacter_hepaticus QVQILKKMAYHYYVLDEPIATDEQYDSLYHQIVRFEEENPHLIDASSPTQRVGFSKNTHLERMWSLEDVFSPKFDGASLNLLYQEGLVSATTRGDGVIGELVTHNAKTIIPLEIEIRGEVVIAKEDFEYINFANPRNAAAGSLRQLDAKITAKRKLRFMPWRNNYPIMLDGMVIMLDKIASQQQLGWTIKSPRFACAYKFPAVEKSSKILSVSLQVGRTGIITPVALKPVEIEGAMISRATLHNFSEIIRLGDEVIIIRSGDVIPKIIKPPTHCPVCHFASKKALNIDGLGEKIVIQLVRNIKDIYALKRANNLIYAIQNTILWRFINALGIEHIGEGASKKLAQKFILSVDGFGEEMAYSLVEFNKVELLNKTIVLTGTLRDRIIKLLESKGAKISSSVSKKTDFVIYGEKAGSKLEKAQSLNITTLNE Heliobacillus_mobilis LREIIRHHEYRYYVLDAPEITDADYDALMRELQAIEDTYPELVEADSPTRRVGFNSVRHRVPLLSLANAFEPKIDGLTVVLTYEQGFVRGATRGDGETGEDITENLKTIIPLRLDVRGEAYLPKGAFATLNFANPRNAAAGSLRQLDPKVTASRPLRAFFYRHDLPFEIDGMVVKVNELDEYERLGVTSKSPRYAIAFKFPAEQAVTQVRSITVKVGRTGVITPTALEPVRVAGTTVSRATLHNEDIIIHVGDYVIIQKAGDIIPEVVSVPQACPECHYASRDAMNIEGLGPAIVNLLVHNPADLYDLKSAANLIAAIEQSKLAAFTFALGLRLVGQTAAKTLASHFLQAIPEIGPKMADSLKNYFLVEKGGKMIVLTGTLRREAQRLLEARGAKISSSVSKKTSMVIAGEEAGSKLEKALELKVPVLRE Leptospira_interrogans LSDEIRHHQYLYYVKNDPKISDFDFDQLFRRLQDLEEEFPQFKDLASPTLVVGFEKFQHKLPVLSLINTYEWKIDGASIVLYYENGLKNGVTRGSGGIGDDVTDNIRTIIPLRLYLRGEVFMTFKDFEEFNYANPRNLSAGSIKQKNSSDTAKRPLRIFTYKDSLGFPTDGLVIKLNDISKRDALGYTSHSPRWARAYKFDAIMKESKIVDITYAVGRTGKITPRAIEPISLAGTTVTFATLHNQDYIVGIGAIVRVAKRGEIIPAVEEVPDRCPSCFYCQRKQMDIEGLGDKQIEFLIKSIADLYDLKSVNIILKGIEQSKFRFLLPSLGLSELGHKVTELLIEHGLLEIPGIGPSTIQAFQENFLKKAGGQSWCVTGSFRDKAMDLIVYYGGRKVSAVSSKTTHLLAGPGAGSKLEKANELGVSVYDE Magnetococcus_sp LRKRLNHYAHSYHTLDTSLVSDAEYDRLFRELQSLEAADPTLISADSPTHRVGFEKVRHRVAMLSLDNAFEPKLDGLAFSLTYAEGLVRAATRGDGQEGEDVTAHARTIVPLRLEVRGEVYMPLATFEKLNFANPRNAAAGSLRQLDPKITASRGLRMFCYRETLPYEIDGAVLKVDSQRLRERLGFVARAPRWAMAFKFPATEESTTVQAIDLQVGRTGVITPVALEPVAVGGVTVTNATLHNFLELVRVGDRVIVRRAGDVIPEVVRVPVACPVCHFASRKAMNIEGLGDKLVALLVERISDLYRLKSVANLLEAIEQSKAARFLFGLGIRDVGVTLAGSLAAHFLVGIEDVGEVVARRVVHFFLRALGGLSVVLTGTLREAAAVRLEGLGAKVVASVSGKTGCLVCGESAGSKLAKAQKAGVPVLDE Magnetospirillum_magnetotacticum LVEKLVSWDEAYHGQDAPLVPDDVYDGAKRRLSGIEARFPELAAKSPIKDKVGFGKLVHALPMLSLDNAFEPKIDGLSINLRYENGFVSAATRGDGAEGEDVTRNLDTFLPRRLEIRGEVYMTKADFLALNFANPRNAAAGSLRQLDPKITASRPLSLFAYRAALPYDIDGIVYKVDDLELQKRLGFVSRSPRWAIAHKFPAEQATTLLEAIDIQVGRTGALTPVALTPVNVGGVVVSNATLHNEDEIVRVGDTVIVQRAGDVIPQIVGVPDTCPVCHFVSRNAFDIEGLGDKNIEFLVRKPAHIFTLRSTEKLFESIRSRALERFIFALGIRQIGEATAKRLARHYLTSIEDIGPSVAADLLDFFLVRAMGKAVVFTGTLRPEAKARAEALGAKVVGSVSKKTDYVVVGADAGSKATEAAKLGLTILSE Microbulbifer_degradans LKNQINYHNKLYYVLDAPELPDAEYDKLFQELQAIEQQFPELVTEDSPTQRVGFASIEHKRPMLSLDNVFEPKFDGIAASLLYENGLKTAATRGDGTVGEDITQNMRTIVPLKLEVRGEVYMPKAGFLRINFVNPRNAAAGSLRQLNPQITAKRPLVFCAYRESLAYDIDGIVFKVNAFDLQERLGFVSRAPRWAIAHKFPAQEALTVLHDVEFQVGRTGAITPVALQPIFVGGVTVSNATLHNKDEIIRVGDTVIVRRAGDVIPQIVSIPTACPVCHFASRQAMDIDGLGDKIVDQLVNDVADLYTLKSAANLVAAIEASKLDKILYALGIREVGRATARNLANHFLIEVTDVGPVVAHYVVDFFLIAAGGTTYVLTGSLRDEAKDKLQALGAKVSGSVSAKTTCVVAGPGAGSKLAKAEKLGLAILDE Parachlamydia_sp LCHEIWHHNKLYYIEHQPIISDEEFDALLKKLEEIERSHPEWITEFSPSQRVNFKTVAHRTPMLSLANTYELKMDGIAITAIYEQGFKRGITRGNGKRGDDITTNMRMILPLQLEIRGEVFMPRQVFLQLNWANPRNAAAGSLKLLDPKMVAERRLAVVFYRTILPYDIDGIVIKLNDFKDQKRLGVTGKSPRWAIAYKFAAEQAKTRIIDITVQIGRTGVLTPVALEPIFLSGSTIARASLYNQEEVIRIGDLVTIEKGGDVIPKVLNVPLYCPSCYFVGKQAMDIKHMGEKIVIQLIHLPSDIFALKAIQNLMRSIEESKLERFIMALEIKYIGIGTAELLAARALIKIEGVGGKVAQAVVEHFLLELGGKIFVLTGSLRQSAASLIKERGGKVSDSVSRKTNYVVAGAEPGSKLDKARTLGIPVLNE Pediococcus_pentosaceus LREILDRWSKLYYTKDAPEVEDYEYDEKYADLVALEEAFPEIITQDSITQRVGFTKVTHTEPMLSMGDVFELKIDGLAISLIYQDGLIQGSTRGDGNIGEDITKNLKTIVPQKLEVRGECFMPKASFAKLNFANPRNAAAGSLRQLNTNVTKKRDLDTFIYREDLPYGIDGIVLKVNDLSLQQELGHTVKIPRWEIAYKFPPEEAATVVRDIEWTVGRTGVVTPTAMDPVQLAGTTVSRATLNNVDQLVHIGDTVLLHKAGDIIPEITRVPTHCPSCHFGSRNAMNIMGLGPKQIQQLIHHFDDLYKLKRVNNLLEAIDNSRLERLINGLGIQGVGTKMARTLAEKFFDAVDTIGETLANNLATFFLKAVGGKKVVLTGKLRNELKERLISLGADVAGSVSKKTDILIAGADAGSKLTKAQALGIEILDE Pirellula_sp LVDEINRHNRLYYDDAAPEITDLQYDQLLAELTQLENDHPDLRRPDSPTQLVGLVQVPHRVPMLSIDNTYEYKIDGVAGSIRYENGLTLALTRGNGQVGDDITHNVRTILPRSIEVRGELYMTDADLADLNFKNTRNVTAGTIRLLDPKIAASRNIRFFCHMPDLPFEIDGIVFKVDSFEQREKLGVRSKSPRWVIAYKFERYEAITTLEAIDVQVGKTGTITPVALTPVDIADTTVSRASLHNADEIVRVGDTVVVEKAGKIIPKVVRVPTHCPQCYFGSRTGMDIDGLGEEVVDLLVENYADLYRLKNAESLVAGINESRLARVLSSISIRHIGPRVAKLITAKFLAAIHEIGDRIAESLVKFILDAVGGKNIVATGTLRDEIKARIEELGGRAASSVSKKTDFLIAGEKAGSKLTKAESLGVEVLSE Porphyromonas_gingivalis LRRILREHEYRYYVLSSPTIDDFEYDAMMKQLEELEREYPEWDSPDSPTHRVGFASVRHDRPMLSLSNTYELKFDGLSISLIYEDGLVRAVTRGDGIMGDDVTANVRTIVPLRLEVRGEILLPFKEFDRINFANPRNAASGTIKQLDPHIVAGRNLDAYFYRLTLPVATDGIVLKVNAPAQQDLLGFTAKSPRWAIAYKYQAERVRTRLQHVSYQVGRTGAVTPVALDPVLISGTVVRRASLHNADFILHEGDFVYVEKGGEIIPKIVGVTVLCPDCHYCGRKTADIN?IGPETIELLIRNVADFYALRAAAKLLDSIEASKYQAILFGLGIRFVGETVAKKLAAVYLVQIDEIGERIAAAVLHFFLRLAGGKTVVISGTFRDEYKAMVEDNGGRMAGSVSSKTSFILAGSDMGSKREKAEKLGVRLMSE Propionibacterium_acnes LAQRILDAQDAYYARDAPTISDAEYDRLMVELKKVEDDHPELRTPDSPTQRVGFAPVKHLERLLSLDNVFELKIDGLAVDLVYRDGLVSGATRGDGRIGEDVTANVRTIIPRKLEVRGEVFFPVADFTDLNFANPRNAAAGSLRQKDSRVTASRPLSMIVHRDEASHQIDGVVVKVDDVSLQRKLGATSRAPRWAIAYKYPPEEVNTELLDIRVNVGRTGRVTPYGMRPVTVAGSTVEMATLHNAFEVVLIGDTVVLRKAGDVIPEILGPPDHCPSCGLASRGALDIEALGWEAAIALLSSEAGLFDLATTKKMFDELAKAKLWRVLVALSIRHVGPTAARALATHFLAGVDGVGEIIAESVKRWFWAAAGGLTVVVTGSLRDEAKEAIVSRGGKAAGSVSRKTDYVVVGENAGSKETKARDLGRPILDE Rhodobacter_capsulatus LVARIEAANHAYHTLDAPKISDADYDALKRRLAAIEARFPDLARADSPTMRVGFGKVAHEIRMLSLENAFEPKIDGLSLSLRYEDGLVQAATRGDGEVGENVTENARTIIPQRLEVRGEVYMSHADFAALNFANPRNAAAGSVRQLDARITASRPLKFFAYRATLGYDIDGVVYKVNDLALQARLGFRSTTPRWAIAHKFPAELAWTRLEKIEIQVGRTGALSPVALAPVTVGGVVVSNATLHNEDYIIREGDWVQVYRAGDVIPKVADVPHLCPECHFVSRAAFDIEGLGAKQVEAFIREPAEIFTLKSAQNLFQAIEEKRLARLIFALGIRHVGESSAALFATHYLLSIDGVGETLAASVTAAFLVTHLGLTVVFTGTLRAEAKARAEALGAKVAGSVSAKTDILVAGPGAGSKAKKAADLGVRVIDE Rhodothermus_marinus LREVLNQHAYRYYVLDNPLIPDADYDLLMQALRKLEARFPELVTPDSPTQRVGFEKVRHPEPLLSLNNAFELKIDGLAMALTYENGLSVGATRGDGIEGENVTQNVRTIIPLRIEVRGEVYMRKRDFERLNFANPRNAAAGSVRQLNPQVTALRPLSFFAYRDELDYEIDGVVLKIDHRPWQALLGAISNAPRWAVAYKFPAREAITRLLDIMVSVGRTGVVKPVALEPVEVGGVTVSQATLHNEDYVIRIGDLVVVIRAGDVIPQVVRPPERCPSCHFAGRDAMDIEGMGSQVARQLVRPLSDLYRLTRARNLLRAIEASKLSRLLFGLGIRHVGKTTAELLVQRFLAALEGVGPITAESIANWFLKELGGKTFVLTGALRKEAEELIKRAGGRVASSVSRNTDYVVVGENPGSKYDRARQLGIPMLDE Streptococcus_mutans LVQLLNQYAREYYTKDNPSVSDAEYDKLYRELVELEKEFPEDILPNSPTHRVGFEKYRHEYPLFSLQDAFELKIDGLSISLTYVNGLRVGATRGDGTVGENITENLKRVIPLHLTVRGECYLPKASFKTINFANPRNAAAGTLRQLDTKVVAKRKLATFIYRAELAYDIDGVVIKVNSLALQEALGFTVKAPRWAIAYKFPAEEKTAEILSVDWTVGRTGVVTPTALTPVQLAGTTVSRATLHNVDYIIRIGDIVVVYKAGDIIPAVLHVPTVCPSCHFASRDAMNIIGLGPAIVEKLICDVADIYQLKSATKLYKAIQASKAEKLLFGLGIRHVGSKASRLLMERFIAAIDGLGIVIAESLKTYFLKTAGGMTIVLTGKLRSQAKEKLQSLGANVAGSVSKKTSLVIAGSDAGSKLEKAKTLGIEIKDE Synechocystis_sp LRQQLQKASYAYYVLDAPVMEDSVYDQLYRELQRLEAENPELITPDSPTQRVGFRSVAHNIPLYSLENAFELKIDGSAIALTYENGLVRGVTRGDGTTGEEISQNIKTIIPVKLEVRGEAFLPLEEFNRINFANPRNAAAGTLRQLDPKIVHQRRLQFFAYRQRLPYMTDGVVVKINQYPLQRELGFTQKFPRWAIALKYPAEETPTVVKAIEVNVGRTGAVTPLAMEPVQLAGTTVQRATLHNQDRIIRVGDTVIIRKAGEIIPEVVRVPSHCPACHWASRNALDIQGLGEKVVITLVNSVADLYGLKSAEKLIAAIEVSKWSRILFGLGIRHVGQVNAKLLSQQFLEGVYGIGPEIAEAVVNWFLEELGGKTFVLTGTLRLEAQELIEQSGGKVTSSVSTKTDYVLLGDKPGSKAAKAESLGIKLLSE Thermoanaerobacter_tengcongensis LREKINYHNYRYYVLDQPEISDYEYDMLMRELIELEEKYPEFKTPDSPSQRVGFEPFTHIVPMLSLANAFEPKIDGLSVELVYENGFTVGSTRGDGIVGENVTPNLKTIIPLRLVVRGEVFMPKASFAKLNFANPRNAAAGSVRQLDPKVTAKRDLDIFIFKDSLPYDIDGAVIKVNELDKREILGQTAKDYRWAIAFKYPAEMKKTKIVDIVVQVGRTGALTPTALEPVVISGSVVSRATLHNEDYIIRIGDTVLVHKAGGIIPEVVEVPDKCPECHFASKDAMDIEGLGPAIISQLIQNVADLYYLKSARNLLEAIEKSKLDRLLFGLGINLIGSKAAQVIAEHFFLELPDIGPKMARSIVTFFLKEAGGKIFVLTGALRDEAARLIVERGGKVTNSVSKKTDYLIVGADPGSKLKKAQELGVKIINE Thermobifida_fusca LSQDLDDYSYRYYL?GSPIISDAEYDQLMAELRDLEAQYPSLVTPDSPTQKVGFAPVEHLERMQSLDNAFELKIDGLAVALVYEKGLVRAATRGDGRIGEDITLNIRTIVPLRLEVRGEVFLPVKAFEQLNFANPRNAAAGSLRQKDPRVTASRPLSMLVHRHDPEYEIDGVVVKVDDVSLQRRLGSTSRAPRWAIAYKYPPEEVTTKLLDIKTSVGRTGRVTPYALEPVKVAGSEVEFATLHNAQEVVLIGDTVVVRKAGDIIPEVVGPPTECPECFIAGRKALDIEALGYVAATALLRDEGDLFSLKIVEKLFQQLEEAKLWRVLVALSIRHVGPRAAEDLARHFLEAVEGIGPTIARSIVDWFWRAAGGITTVITGTLRDGAKEAVQKLGGRVTGSVSRKTDFVVVGANPGSKYDKAVKLGVPILDE Thermosynechococcus_elongatus LRRLLQRASYAYYALDQPIMEDEVYDQLYRELQELEAAYPEYITPDSPTQRIGFESVSHRIPLYSLENAFELKMDGVALALTYENGLVRGATRGDGQRGEDVTSNVRTIIPLRLEVRGEAFLPLERFHQLNFANPRNAAAGTLRQLDPRIVAQRQLDFFAYRHQLPYLTDGIVVKLNDLKLQQTLGFTQKFPRGSIAWKYEPEQAITDVLAITVQVGRTGALTPVALAPVQLAGTTVSRATLHNADYILHIGDKVVIHKAGEIIPEIVRVPTACPECHWASRDALDIQGLGEKLVQQLVRTPADLYRLKSADKLLVAIANSKWPRVLYGLGIRHVGSVNAQLLADRFLCGVDGIGEEIAQAVQEWFLQALGGKRFVITGTLREQAKALIQKHGGHVSESVSRQTDYLVVGEKAGSKLRRAQELGIPCINE Thermotoga_maritima LREEIEYHNYRYYVLNDPVITDEEYDRLMRRLIELERMYPELVTPDSPTQRVGFKTVKHSVPMLSLDNTYELKIDGVSIALRYENGFVLGATRGDGIEGEDVSENVKTVIPLRLEVRGEIYMPVDEFKRLNFANPRNAAAGTLRQLNTALVAARRLDSFIYKRELDYWVDGVVVKVNRFDFQRILGETSKAPRWAIAFKFPAEQARTRVLDVTIQVGRTGVLTPVALEPVQLAGTIVKRASLHNFEYIIRIGDYVFVEKAGGIIPQIVKSPDKCPVCTLVSREALDIEGLGEKLIDRLIKDIADIFYLRTIAKILQEIEEAKLHKLITGLGIPMVGQKTAKILAEHFLKDIPGIGPEIAKSIVEYFLKKAGGLTFAVTGTLREEIIEFLEKLGAKVVNSVSRNTDYLIVGENPGSKYERAKMLKVKMMSE Thermus_thermophilus LRDLIRYHNYRYYVLADPEISDAEYDRLLRELKELEERFPELKSPDSPTLQVGFRPVRHPTRMYSLDNAFEHKVDGLSVNLYYEEGLVYGATRGDGEVGEEVTQNLLTIIPRRLEVRGEVYMPIEAFLRLNFKNPRNAAAGSLRQKDPRITAKRGLRATFYRRALPFEADGVVVKLDELALWRELGYTARAPRFAIAYKFPAEEKETRLLDVVFQVGRTGRVTPVGLEPVFLEGSEVSRVTLHNESYIIRIGDWVLVHKAGGVIPEVLRVPETCPECHFASRKAMDIQGLGEKLIERLVKDVADLYRLKSAQNLLRQIEESKLERLLYALGLPGVGEVLARNLAARFLLEVEEVGELTARAILETLLKEAGGLTFVITGELREEVKALLRRLGAKVTDSVSRKTSYLVVGENPGSKLEKARALGVPTLTE ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M984] TITLE EF2; LINK TAXA = Taxa1; DIMENSIONS NCHAR=627; FORMAT DATATYPE=Protein SYMBOLS= "A C D E F G H I K L M N P Q R S T V W Y" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Anopheles_gambiae HGKSLTDSLVSKAGIIAGAKAGETRFTDTRKDEQERCITIKSTAISMYFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLNKMDRALLELQLDPEDLYQTFQRIVENVNVIIATYNDRIDPSRGSVGFGSGLHGWAFTKQFAEMYSAMFKKLMNRLWGENFFNSKTKKWRSFVMYILDPIYKVFDAIMNYKTDEIPKLLEKILKHEDKDKDGKNLLKVVMRTWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGDEAAVAVKNCDPGPLMMYVSKMVPTSDKGRFYAFGRVFAGKVATGQKCRIMGPNFTPGKKEDLKAIQRTILMMGRYVEAIEDVPCGNICGLVGVDQFLVKTGTISDAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCESGEHIIAGAGELHLEICLKDLLSEKYDYDVTEARKIWCFGDGTGPNIVVDCTKGVQYLNEIKDSVVAGFQWASKEGVLAEENMRGVRFNIYDVALHADAIHRGGGQIIPTARRVLYASYITASPRIMEPVYLCEIQCPEAAVGGIYGVLNRRRGHVFEDSQVAGTPMFVVKAYLPVNESFGFTALRSNTGGQA Blastocystis_hominis HGKSLTDALVSKAGIISKKAAGDARFTDTRADEQERCITIKSTGISLYYLINLIDSPGHVDFSSEVTASLRVTDGALVVVDSVGGVCVQTETVLRQALAERIRPVLNKLDRVIAELQLDPEEAYHKLMKSVESVNVIIATYPDQVYPNQGTVAFGSGLQQWGFTRKFARLYAKKFGKMMERLWGDYFFDAENKKWRAFVQFVLDPVYGLYRALNEGRTEKYMKMLDTLLTSEEKDLRDKALVKRVMSKWLPAADALLEMIVLHLPSPVDAQKYRAPLLYDGDEACTAMKKCDPGCLMMYVSKMVPTADQSRFYAFGRVFSGIIRSGQKVRILGPKYSATNKSDLKSVQRTVIMMGRYVEQVADIPCGNTCGLVGVDQYILKQATLTSAMTIKMMKFSVSPVVRVAVEPKNPGDLPRLVEGLKRLSKSDPMVVVEAGEHIIAGAGELHLEICLKDLMSTTYGMDVELMRKIWAFGNGNGPNIFCEATHGVQYLNEIKESVVAGFGAACAAGPIVDEPCRNVLCKLMDVTLHADSIHRGMGQIMPPARRVVLGTMLKAEPILVEPVFLCEIQVPRAVSGGIYGVLTRRRGHVFEEIDEVGTPMMNIKSYLPVAESFGFTQLRGATAGQA Botryocladia_uvarioides HGKSLTDSLVAAAGIIAMANAGDQRLTDTRQDEQDRCITIKSTGISLYFLVNLIDSPGHVDFSSEVTAALRVTDGALVVVDSVEGVCVQTETVLRQALTERIKPVMNKLDRSFLELQLEPEDMYQNFSRIIENANVIMSAYMDQVYPEKGTVAFSAGLHGWAFTSRFARMYSKKFGKMTPRLWGDSFYNRKEKKWRAFNDFVIKPIKKIIDNCMSDKIEELEKILSSLLTTEDKELRQKPLMKRILQKWIPADQALLEMMVLHLPSPAEAQKYRAELLYEGDACCTAIRNCDPGPLMLYISKMVPSSDKGRFIAYGRVFSGTVSSGQKVRIMGPNYVPGTKKDLKSIQRTLLMMGRRTDSVDSVPCGNTVGLVGLDQVIVKSGTISEAFPLKDMKYSVSPVVRVAVEPKNPSDLPKLVEGLKRLAKSDPLVQTESGEHVIAGAGELHLEICLKDLLRDEYGVPEDAARKIWCFGDTTGANFLVDRAKAVQYLNDIKDSCVAAFQWATKEGVLCDENMRGVLFNIHDCTLHADNIHRGGGQIIPTCRRALYGAQLMAAPRLVEPVFLVEIQCPDQTVGSIYGVLTRKRGHVFEELQRPGTPMFNVKAYLPVSESFGFTALRSATSGQA Caenorhabditis_elegans HGKSLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLNKMDRALLELQLGAEELFQTFQRIVENINVIIATYGDMVDPSIGNVGFGSGLHGWAFTKQFAEMYAGKFGKLMKNLWGDRFFDLKTKKWRGFCQFVLDPIFMVFDAVMNIKKDKTAALVEKLLANDEKDLEGKPLMKVFMRKWLPAGDTMLQMIAFHLPSPVTAQKYRMEMLYEGDEAAVAIKTCDPGPLMMYISKMVPTSDKGRFYAFGRVFSGKVATGMKARIQGPNYVPGKKEDLKTIQRTILMMGRFIEPIEDIPSGNIAGLVGVDQYLVKGGTITDAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCESGEHIIAGAGELHLEICLKDLLAEKYEYDVTEARKIWCFGDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFTALRSNTGGQA Chlamydomonas_reinhardtii HGKSLTDSLVAAAGIMAVEQAGDARLTDTRADEQERGITIKSTGISLYYLVNLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALAERIRPVLNKMDRCFLELMLEGEEAYTTYLRVIENANVIMATYQDQVYPDKSTVSFSAGLHGWAFTTTFARMYASKFGRMITKLWGDNFFDPATKKWRGFVQFIYEPIKQIIELAMKDAKDKLWPMLEKLLKSDDKELSGKPLMKRIMQSWLPANEALLEMIVYHLPSPAKAQRYRVDVLYEGDTYATAIRNCDPGPLMVYISKMIPTADKGRFFAFGRVYSGKVATGAKVRIMGANYIPGEKKDLKSVQRTVLCMGRKQEAVEDVPCGNTVALVGLDQYITKTATITDAFPMKAMKFSVSPVVRVAVEPKNASDLPKLVEGLKRLARSDPMVQCETGEHIIAGAGELHLEICLKDLLSEEFGWDKEIAKKIWCFADTNGANMMIDVTKGVQYLNEIKDSCVAAMQWACKEGVLAEENMRGIVFEFMDVVLHTDAIHRGGGQIIPTARRVIYAAELTAQPRLCEPVYLVEIQAPEQALGGIYSTLNTKRGMVFEEMQRPGTPMYNIKAYLPVVESFGFTSLRANTAGQA Chlorella_kessleri HGKSLTDSLVAAAGIIAFEQAGDQRLTDTRADEQERGITIKSTGISLYFLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLNKIDRCFLELMLDPEEAYLAYRRVIENANVIMATYADQTHPEAGTVSFSAGLHGWAFTTVFANMYAAKFGRMMEKLWGDNFFDATTRKWRGFCQFIYEPIKTVIEAAMNDNKDKLFDLLKKLLKPEDRELMGKPLMKRVMQTWLPAHEALLEMMIWHLPSPAKAQKYRVDVLYEGDTYATAVRNCDAGPLMMYVSKMIPAADKGRFYAFGRVFSGRIATGRKVRIMGPNYVPGQKKDLKTVQRTVLCMGRRQEAVEDVPCGNTVALVGLDQFITKNATLTDAHTIKAMKFSVSPVVRVAVEPKVASDLPKLVEGLKRLAKSDPMVQCETGEHIIAGAGELHLEICLKDLLSEEFGWDKELAKKILAFGDTTGPNMVTDITKGVQYLNEIKDSVVAAFQWASKEGVLAEENMRGIVFEVCDVVLHADAIHRGGGQIIPTARRSMYAAQLTAQPRLLEPVYLVEIQCPEQAMGGVYSVLNQKRGMVFEELQRPGTPIFNLKAYLPVIESFGFTSLRAATAGQA Cryptococcus_neoformans HGKSLTDSLVSKAGIIASSKAGEMRFTDTRQDEIDRGITIKSTAISMYFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTETVLRQSLGERVKPILNKVDRALLELQVSKEDLYQSFCRTIESVNVIISTYTDMVYPEQGTVAFGSGLHGWAFSRNFAGRYSKKFGKLMPKLWGDNYFNPKTRKWRAFNMFVLDPIFRLFDSIMNFKKDEIPKLLEKLLTSEERDLEGKQLLKVVMRKFLPAGDSLLEMICINLPSPVTAQKYRVETLYEGDESAIGIRDCDPGPLMVYVSKMVPTSDKGRFYAFGRVFSGTVSSGPKVRIQGPNFVPGKKDDSKSIQRTVLMMGRSTEAIEDCPAGNIIGLVGVDQFLLKSGTLTTAHNMRVMKFSVSPVVQVAVECKNASDLPKLVEGLKRLSKSDPCVKTDSGEIIVAGAGELHLEICLNDLLADTYGWDVTEARKIWCFGDTTGPNVFLDGSKAVQYMNEIKDSCVAAFQWATKEGGVAEEPMRGVRFNILDCTLHADAIHRGGGQIIPTARRVCYAAQLLATPAFQEPMFLVEIAVPESAQGGVYSCLNVRRGHVFSAEQRPGTPMYTLKAYLPVSESFGFNALRAATGGQA Cryptosporidium_parvum HGKSLTDSLVCKAGIIASKAAGDARFTDTRADEQERCITIKSTGISLFFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDAVDGVCIQTETVLRQALNERIRPVLNKVDRALLELQWEAEDIYQNFTRVIENVNVIISTYSDQVFPEKGTVSFGSGLHGWAFTEKFARIYAKKFGKMMQRLWGDNFFNPETKKFRAFCQFIMEPICQLFSSIMNGDKAKYEKMLVNLLKGDDKALVDKPLLKKVMQLWLSAGDTLLEMIVTHLPSPAAAQKYRVENLYEGDETAKGIRNCDPAPLCMFVSKMVPTSDKGRFYAFGRVFSGTVATGQKVRIQGPRYVPGGKEDLKNIQRTVLMMGRYVEQIPDVPAGNTVGLVGIDQYLLKSGTITTAHNIASMKYSVSPVVRVAVRPKDNKELPKLVEGLKKLSKSDPLVVCETGEHIIAGCGELHVEICLQDLLHDKYGFDKNAAMKIWCFGETTGPNIMVDVTTGIQYLTEIKDHCNSAFQWATKEGILCEEDMRGIRFNLLDVTLHADAIHRGAGQITPTCRRVMYAAALTASPRLLEPMFLVEISAPQEVVGGIYATLNQRRGHVFHEEPKSGTPQVEIKAYLPVADSFKFTTLRAATSGKA Dictyostelium_discoideum HGKTLTDSLIQRAGIIADKVSGDMRYMSCRADEQERGITIKSSSVSLHFLINLIDSPGHVDFSSEVTAALRVTDGALVVIDCVEGVCVQTETVLRQAVAERIKPVLNKVDRFLLELQLNTEEAYLSFRRAIESVNVIVGNTEDTVSPEKGTVAFGSGLHGWGFTGRFAKLYAAKFGKLMGRLWGDSYFDATAKKWRAFCQFVLEPIYQLTRAIVDEDAVKLEKMMKTLLAPEDAEIKGKQLVKAVMRKFLPAADAILSMIVTHLPSPLVAQKYRCANLYEGDECAVAIQKCDPGPLMMYVSKMVPTSDKGRFYAFGRVFSGTIRTGQKVRIMGPDYVPGKKDDLKSIQRTVLMMGRKTEQIEDCPCGNIVGLVGVDQFLVKSGTITVAHNIRVMKFSVSPVVRVAVEPKNPSDLPKLVEGLKRLAKSDPCVLCESGEHIVAGAGELHLEICLKDLLADNHEWDKNDAMNIWSFGEGNGANLLVNVTKGVQYLNEIKDSFVGAFQWATKEGVVCDENMRGIRFNLYDVTLHTDAIHRGGGQIIPTARRVLYAAELTASPTLLEPIYLVEITAPENAIGGIYSVLNRRRGIVIGEERRIGSPLFSVKAHLPVLESFGFTALRSHTAGQA Entamoeba_histolytica HGKSLTDSLVTLAGIISNEKAGVARYTDTRPDEQERCITIKSTSISMYFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTETVLRQALTERVKPIVNKVDRVILELKEEPEEAYQSFCRSIENVNVLISTYKDQVSPGEGTVAFGSGLHGWAFTEKFAKMWSAKFGRMLEKLWGDNYWDAKAKKWRGFVQFCFDPITKLFNAIMEGRKADYEKMLTNLLSADDKEKEGKELLKTVMKLWLPAGVTLLEMIVLHLPSPVVAQKYRTSNLYTGDEAAKAMANCDEGPLMMYVSKMIPTNDKGRFYAFGRVFSGTIRTGGKARICGPNYVPGKKDDCKNIQRTMLMMGRYTDPIDECPCGNVIGLVGVDQYLLKSGTITVAHIIKDMKFSVSPVVRVAVETKNPSDLPKLVEGMKRLSRSDPLCLCESGEHIVAGAGELHLEVCLKELLSEKYGWDVDEARKIWCFGDNCGPNLFVDVTKGIQYLNEVKDSIVNGFNNAMHDGVVCNEQIRGVRINLEDVKLHADAIHRGGAQMIPCARRCCFACVLTGAPSLLEPMYLAEIQCPESAIGGIYTVMSRRRGKIISEEQRPGTPLFNVRAYLPVCESFGFTALRSHTSGQA Euglena_gracilis HGKSLQDSLVAAAGIIAIQKAGDTRLTDTRSDEQERGITIKSTSISMYHLINLIDSPRHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTETVLRQALTERIKPVLNKMDRAILELQLDAEEAFQSFQRTIGSVNVVVATYNDQCYPEKGTVAFGSGLQGWAFTVRFARMYAKKFGKMMNRLWGDSFFDAKAKKWRAFCQFVWEPINQMFDAVMSDKTEKYQKMLTSLLSSDDKDLTGKKLLKSIMQKWLPAAEALLQMIVTHLPSPTKAQAYRAETLYTGDKYFKAIKECDPGPMCLYISKMVPTADKGRFIAFGRVFSGTVRTGQKCRIMGPNYEPGSKTDLKSIQRTVIMMGRYQEPVDDIPSGNLVGLFGVDQFVVKTATIVEAYPLKDMKYSVSPVVRVAVETKNPADLPKLVEGLRRLAKSDPLVQTETGEHIVAGAGELHLEICLKDLMADNHEWDAGDARKIWCFGDTSGPNVITDQTKGIYNLQEVKDSFIAAWQWATKEGVLCDENMRGLRYNLQDITMHADAMHRGGGQMIPTARRVMYASVLTAAPRLMEPSFLVEIQTVDHAIGGVYSVFLKPRGVIIGEEFRAGTPILNVKAYLPVQESFGFTALRQSTAGQA Gallus_gallus HGKSLTDSLVCKAGIIASARAGETRFTDTRKDEQERCITIKSTAISLFFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLNKMDRALLELQLDPEELYQTFQRIVENVNVIISTYGEMIDPVLGTVGFGSGLHGWAFTKQFAEMYVAKFADMMKKLWGDRYFDPATGKFRTFCQLILDPIFKVFDAIMTFKKEEAAKLIEKLLDSEDKDKEGKPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGDEAAIGIKNCDPGSLMMYISKMVPTSDKGRFYAFGRVFSGLVSTGLKVRIMGPNYTPGKKEDLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTITHAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCESGEHIIAGAGELHLEICLKDLLAEKYEWDVTEARKIWCFGDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGVLCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYACVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTALRSNTGGQA Gelidium_canariensis HGKSLQDSLVAAAGIIAMANAGDQRLTGTRQDEQDRCITIKSTGISVYFPVNLIDSPGHVDFTSEVTAALRVTDGALVVVDSVEGVCVQTETVLRQALTERIKPVMNKLERSFMELQLEAEDMYQNFTRIIETANVIMSTYQDQVYPDGGTVAFTAGLHGWGFTKQFARMYMAKFGKMTKRLWVDNYFEAKEKKWRAFCQFIILPIKKIIELCMSDIVDELTKLLSSLLNTEVQGSRQKQLMKRVLQKWLSADQALLEMMVLHLPSPATAQKYRAEVLYEGDACCTAIRNCDPGPLMLYISKMVPTSDKGRFYAFGSVFSGRVAAGIKVGIMGPNYVPGTKKDLKPIQRTLLMMGRRQEPVDDVPCGNTVGLVGLDQVIVKSGTITRSFPLKDMKYSVSPVVRVAVEPKNPSDLPKLVEGLNRLAKSDPLVQTESGEHIIAGAGELHLEICLEDLLRDEYGVEEDAARKIWCFGDTTGANILVDITKGVQYLNEIKDSLVCCIEWASQEGCLLHENMRGVLCNMHDCQLHADSMHRGGGQIDPTGRRDLYGAQLMAQPKMSEPIFLAEIQCPTAVSSSIYGVLTRRRGHIDVEIPRIGTPMSNVKGFLPVSESFGFTALRAATSGQA Giardia_lamblia HGKSLTDSLIAHAGIISMGSAGNTRFTDTRQDEKDRCITIKSTGVSLYYLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCAEGVCVQTETVLRQALSERVIPCLNKVDRVIMELKLSGEDAFLMFEKTIGEVNQLIATYQDCVDPSRGNVAFGSGLHGWGFTTHFARIYTKKFGTWMKNLWGNRFLNEKTGKWRGFAIYVMDPILQLFDAVMTEQKKKYTKMLKQLLTPDEEDMTGKRLLKAVMQKFLPAADALLEMIIVHLPSPKKAQQYRVDTLYTGDPAAEAIRNCDPGPLMLYVSKMVPTVDKSRFFAFGRVFSGVVQTGQKVHIMGPEYHPGKKDELKNIQRTILMMGSRIEQIDDVPCGNTVGLVGIDQYLVKSGTISQAHSIKPMKFSVSPVVRVAVEPANPKDLPKLLEGMKRLDKSDPCVMCDENQNIIAGAGELHLEICLKDLLTDKYGWDSDEAKQIWSFGVGASSNLILEATKGVQYVKESKEHIVSGFQIVCRNGVLAGEELVGTCFKLRDATFHADAIHRGAGQLTPATRRGLYAACLYASPMLMEPFYLVDILAPEGCMGGIYSTMSKRRGVVISEEPREGQPLTEVKAHLPVAESFGFDALRAATSGQA Guillardia_theta HGKSLTDSLVASAGIISLDSAGEARLTDTRADEQERGITIKSTGISLYFLVNLIDSPGHVDFSSEVTAALRVTDGALVVVDCIEGVCVQTETVLRQALLERIKPVLNKLDRAFLELQCENEEMYRTFYKVIENVNVIMVTYQDQVSPEVGNVAFSAGLHGWAFTSQFARMYAKKWKKLTLKLWGDNFFDPSSKKWRSFSHFILNPIKKIINYAMSDKVDEIVKAMEGFITNDDKSLKQKNLMKRVLQKWLPADQALKEMIIHHLPSPARAQFYRVGNLYEGDEFAESIKKCDSGPLMVYISKMIPSSDKGRFIAFGRVFSGTIKTGQKIRIMGSNYIPGKKTDLKNVQRVLLMMGRKVEIIDNLPAGNTVGIVGIDQCLVKSGTISNAYPMKNMKYSVSAVVRVAVEPKNPSDLPKLIEGLKRLSKSDPLVQCESGEHIVAGAGELHLEICLKDLLKQKFDMNEEDIKKIWCFGDGNGPNFLVDRTKGLQYINEIKDSCNSGFQWATKEGVLCGENIRGVLFKIVDVTLHADAIHRGGGQIIPTARRCFHGAQLLANPKLLEPVYLVEIQCHENSVGSIYGVLNRKRGHVFEESQRPGTPIFNVKAYLPVQESFGFTALRAATGGQA Mastigamoeba_balamuthi HGKTVTDLLVCKAGIIASAKAGTVSSTPPGGEEQERGIMTKSTVVPLYFLISLIDSPTHVDMSSEAATALRVSDGALVVVDCVEGVCVQTETVLRQALGERIKPCLDNVDCMLGELQNDPEDMYQSFSRAIESVNAVIATFHDQVDPTKGTVAFGSGLHRWAFSNTFARMYAQKFGKMMERLWGDNYFDTNGRKWRSFCRFILDPIFEMASAIMGDDKPVIERMLTALLKPEEKCLLQKNLLMAVMRTWLPAADCLLAMAVLHLPCPTTAQEYRCETLYTGDPYATAFRKCDPGPLIMYVSKMVPTNDRGRFYAFGRVFSGTIHTGMQVRIMGGNFTTGKKDDLQTIQRTLLMMGHTTQPVEDCPSGNVIGLVGVDQLLVKSGTITDAWPIKDMRFFASPVVRVAVEPKNPADLPKLVEGLKCLAKSDSLCQCVSGEFIIACVSEQHLEICLKVLLADKYGWDVGDARKIWCFGDTKGANCLVDMTKAVQYLLEIKDHCVSAFQWATKEGTLCDENVRGVRYNLYDVALHADAVHRGGGQIIPTARRCYCACLLTAEPRLLEPVYLVDIQCPETVIGGIYSVLNRRRGTIVAEEPRPGTPLCNIRAYLPVLESFGFTALRANTAGQA Monosiga_brevicollis HGKSLTDSLVSKAGIIAGAKAGETRFTDTRQDEQDRCITIKSTAISLYFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDAVSGVCVQTETVLRQAIAERIKPVLNKMDRALLELQLEQEDLFQTFRRIVESINVIIATYGDQVDVSAGTVGFGSGLHGWAFTKQFATMYASKFGKLMKRLWGDQFFNAKEKKWRGFNMFVLAPIFKVFDSVMNFKKDDTAKLITKLLSADEKELEGKPLMKAMMRRWLPAGDAMLEMITIHLPSPVTAQNYRMEMLYEGDAAALGIKNCDPAPLMMYVSKMVPTTDKGRFYAFGRVYSGKVATGMKARIMGPNFVVGKKDDLKTIQRTILMMGRFIEPIEDVPCGNICGLVGVDQFLVKTGTLTGAHNMKVMKFSVSPVVRVAVECKNPSDLPKLVEGLKRLAKSDPMVQCESGEHIVAGAGELHLEICLKDLLADNFEWDVTEARKIWCFGEGTGPNVIVDVSKGVQYLNEIKDSVTTGFNWASKEGVLADENMRAIRFDLHDVTLHADAIHRGGGQIIPTARRVLYACCLTAQPRLMEPVFLVEIQCPETAMGGVYSVLTRRRGMVFEENPVSGTPMYNVKAYLPVNESFGFDSLRAGTGGQA Neurospora_crassa HGKSLTDSLLAKAGIISSGKAGEARATDTRADEQERGITIKSTAISLYFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTVEGVCVQTETVLRQALGERIKPVVNKVDRALLELQVSKEDLYQSFSRTIESVNVIISTYFDQVYPDRGTVAFGSGLHGWAFTRQFATRYAKKFGKMMERLWGDNYFNPKTKKWRAFNQFILDPIFKIFSAVMNFKKDEVAALLEKLLATDDREKEGKQLLKAVMKAFLPAADCLLEMMILHLPSPVTAQAYRAETLYEGDEAAMAIKTCDPGPLMLYVSKMVPTSDKGRFYAFGRVFAGTVRSGLKVRIQGPNYTPGKKEDLKAIQRTVLMMGGKVEPIDDMPAGNIVGLVGIDQFLLKSGTLTTAHNMKVMKFSVSPVVQRSVQVKNAQDLPKLVEGLKRLSKSDPCVLTESGEHVVAGAGELHLEICLNDLLADDFGWDVTDARKIWAFGDTNGANLLVDQTKAVQYLNEIKDSVVSGFQWATREGPIGEEPMRSIRFNILDVTLHADAIHRGGGQIIPTARRVLYAATLLAEPSLLEPVFLVEIQVPEQAMGGVYGVLTRRRGHVFGEEQRPGTPLFTIKAYLPVMESFGFNGLRAATSGQA Plasmodium_yoelii HGKSLTDSLVSKAGIISSKHAGDARFTDTRADEQERCITIKSTGISMYFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLYQALGERIKPVLNKVDRALLELQMEVEDIYQTFARTIESVNVIISTYTDQVYPEKGTVSFGSGLQGWAFTETFSRIYSKKFGKMMQRLWGNSFYDAKTKKWRGFCQFIMEPILNLCQSIMNDDKEKYTKMLQNILKGDDKLLTGKQLLKKAMQLWLPAGDTLLEMIVTHLPSPATAQKYRVENLYEGDEAANAIRNCDPGPLMMYISKMVPTSDKGRFYAFGRVFSGTVATGQKVRIQGPHYVPGEKTDLKNIQRTVLMMGRYTEQVQDVPCGNTCCLVGVDQYIVKSGTITEAHNIADMKYSVSPVVRVAVKPKDSKQLPKLVDGLKKLAKSDPLVLCESGEHIISGCGELHIEICLKDLLHSNYQWDKNLALKIWAFGETIGPNLLTDNTSGIQYMNEIKVHCVAAFQWASKEGVLCEENMRGCEFRMLDVHMHADAIHRGAGQIMPACKKCIYACELTAVPRLVEPIYLVDISCPQDVVSGVYSVLNKRRGIVISEDQKLGTPLLKIQAHLPVAESFGFTSLRAATSGQA Porphyra_yezoensis HGKSLTDSLVAAAGIIAMANAGDARLTDTRQDEQDRCITIKSTGISLYFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDSVEGVCVHTETVLRQALTERIIPVMNKLDRSFLELQLEPEEMYQNFQRIIENANVIMATYQDQVYPEKGTIAFSAGLHGWAFTTRFARMYAKKFKKMLGRLWGDNFFDRANKKWRAFCEFVIKPIKKIIELAMSDKVDDLVKLLSTLLTTDEKELRQKKLMKRVLQKWLPADQALLEMMITHLPSSAKAQKYRVDTLYEGDVCATSIRNCDPGPLMLYISKMVPAADRGRFIAFGRVFSGTVRTGTKVRIMGSNYEPGTKKDLKAVQRAMLMMGRRTEAVDSVPCGNTVGIVGLDAVILKTASISDAFPLKDMKYSVSAVVRVAVEPKNPGDLPKLVEGLKRLSKSDPLVQCESGEHIIAGAGELHLEICLKDLLRDEYGMDEDAAKKIWAFTDSGSACLMMDRSKAVQYLLEIKDSMVSAFQWATREGVLCDENMRGLSFNITDVTLHADAIHRGAGQIMPTARRCMYGAQIKASPRLLEPVYMVEIQCPEASVGSIYGVMSRKRGHVFEEVQRPGTPMYNVKAYLPVQESFGFTALRSATSGQA Saccharomyces_cerevisiae HGKSLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIKPVVNKVDRALLELQVSKEDLYQTFARTVESVNVIVSTYADQVYPARGTVAFGSGLHGWAFTRQFATRYAKKFGKMMDRLWGDSFFNPKTKKWRAFNMFILDPIFRLFTAIMNFKKDEIPVLLEKLLKGDEKDLEGKALLKVVMRKFLPAADALLEMIVLHLPSPVTAQAYRAEQLYEGDANCIAIKNCDPADLMLYVSKMVPTSDKGRFYAFGRVFAGTVKSGQKVRIQGPNYVPGKKDDLKAIQRVVLMMGRFVEPIDDCPAGNIIGLVGIDQFLLKTGTLTTAHNMKVMKFSVSPVVQVAVEVKNANDLPKLVEGLKRLSKSDPCVLTESGEHIVAGTGELHLEICLQDLMADDYGWDVTDARKIWCFGDGNGPNLVIDQTKAVQYLHEIKDSVVAAFQWATKEGPIFGEEMRSVRVNILDVTLHADAIHRGGGQIIPTMRRATYAGFLLADPKIQEPVFLVEIQCPEQAVGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGLRQATGGQA Schizosaccharomyces_pombe HGKSLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAISLFFLVNLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIRPVVNKVDRALLELQISQEELYQNFARVVESVNVVISTYYDQVFPDKGTVAFASGLHGWAFTRQFANRYAKKFGKMMQRLWGENYFNPKTKKWRAFNMFILDPIYRIFDAVMNSRKDEVFTLLSKLIKPDEKELEGKALLKVVMRKFLPAADALMEMIVLHLPSPKTAQQYRAETLYEGDECAVGIRNCDAAPLMIYVSKMVPTSDRGRFYAFGRVFSGTVRSGLKVRIQGPNYVPGKKDDLKAIQRTVLMMGSRIEPIEDCPAGNIIGLVGVDQFLVKSGTLTVAHNMKVMKFSVSPVVQVAVEVKNGNDLPKLVEGLKRLSKSDPCVLCESGEHIVAGAGELHLEICLKDLMADEFGWDVTDARKIWCFGDTTGANVVVDQTKAVAYLNEIKDSVVAAFAWASKEGPMFEENLRSCRFNILDVVLHADAIHRGGGQIIPTARRVVYASTLLASPIIQEPVFLVEIQVSENAMGGIYSVLNKKRGHVFSEEQRVGTPLYNIKAYLPVNESFGFTGLRQATAGQA Spodoptera_exigua HGKSLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPILNKMDRALLELQLEAEELYQTFQRIVENVNVIIATYNDRVDPSKGSVGFGSGLHGWAFTKQFSEMYADKFKKLMNRLWGENFFNAKTKKWRSFCMYVLDPIYKVFDAIMNFKKEEIDGLLTKIIKHEDADKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGDEAAIGIKNCDPAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFTPGKKEDLKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCESGEHIVAGAGELHLEICLKDLLADKYEYDVTEARKIWCFGEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTALRSDTGGQA Stentor_coeruleus HGKVLLDSLIAKAGIIAESNAGDTRYTDTRKDEKERGITIKSTGVSLFYLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTETVLRQALQERIKPVLNKVDRNLLELQLDPESMYQNFVRTIEEANSIISTYDDMVDPTKGNVAFGSGLMGWAFSKKFSQIYAKKFGKMIEQLAGEWYFDAEGKKMRALCQFVVEPIQRLAKAVMEGNNEALTKILKTLLKAEDKELTDKRLLKRIMQKWLNAADCLLDMIVFHLPSPKVSQRYRVDYLYEGDECAQAIRNWRLGPLMMYVSKMVPSQDKGRFVAFGRVFSGTISAGQKVRIMGPNFIAGKKDDLKNIQRTVLMMGRYTEHIPDVPCGNTVGLVGVDNYLAKTGTISDAHPLKNMKYSVSPVVRVAVKPKNAADLPKLVEGLKKLSKSDPLVQCETGEHIVAGCGELHVEICVHDLLQDDFNWDPNDAKKIWCFGETIGANMLVDTTKGVQYMNEIKDSLESGFQWATKEGCMSGENMRGVRFNVLDAYLHADAIHRGGGQLIPTARRVCYASFLTAKPALQEPMFLVEIQCPAEVIGGVYQCLSGRRGIVNSEEPVSGTPLTMVKAYLPVAESFGFAALRSQTSGQA Stylonychia_mytilus HGKSLTDSLIAKAGIISEAKAGEARFTDTRADEQERGITIKSTGVSLYYLINLIDSPGHVDFSSEVTAALRVTDGALVVVDYVEGVCVQTETVLRQALGEKIKPVLNKIDKGILELQVEGETMYQNFQRVIENANVIITTYEAQVDPCKGTFAFGSGLFGWAFTTRFAEIYADKFKKMMQKLWGDNFYDAKGKKWRCFVQFIMEPIVRLCRNIMDNNKEAVYKMLTHLLKPEDRDKQVKDLFKAVFQKWINAADALLEMIVMKLPSPLVAQRYRAAYLYEGDPCGQAIKNCDQGPLMVFISKMVPTSDKGRFYAFGRVFSGVVQTGQKVRIMGPNYTPGSKNDLKNIQRTVLMMGGKVEAVPDVPCGNTVGLVGVDQYLMKQGTISDAHNIRVMKYSVSPVVRVAVEPKHASDLPKLVEGLKKLSKSDPLVLCESGEHIIAGCGELHVEICLKDLLADKFGWDINDAKKIWCFGETSGPNLLVDQTKAVQYLNEIKDSCELPFQWATKEAVMTEENMRGIRFNIMDVALHADAIHRGGGQIIPTARRVYYAAQLTAEPRFVEPIFLCEITSPDDAMGGIKKTLAQRRGIVIGEEPISGTPTQNVKAYLPVAESFRFTQLRSITTGQA Tetrahymena_pyriformis HGKSLTDSLLARAGIISESNAGKACLMDTDPKEQEMGITIKSTGVSLYSIINLIDSPGHIDFSGEVTAALRVTDGALVVVDAVEGVAVQTETVLRQAMQEEIKPVLNKIDRSILELKHDGETMYQNFIRVIDMVNVIIDTYNQLVLPDEGSVAFGSGKECWAFTTKFARIYAKKFGKMMKKLWGDNFFDGVGKKWRAFAQFIMDPICKLANAVMDNDLEMMEKMLKTLLSQEDKELRGKHLLKAVMSKWQNAADTILEMMVIHLPSPRKAQQYRTSYLYEGDEIAKSMRACDPGPLMMYVSKMVPTSDKGRFYAFGRVFSGTIATSQKVRILGPNYQPGKKEDLKTLQRTLIMQGRTTEYIPDVPCGNTVGLVGADQFILKTGTITEAHTIRSMKYSVSPVVRVAVNVKNAGDLPKLVDGLKKLSKSDPLVICSTGQHIIAGCGELHIEICLKDLLHEKYSWDRTEAGKLWSFGENAGPNLVVDQTKGIQYVNEIKDSLNSAWQWASKEAPMTEEGMRGVRMNLLDCVLHADAIHRGAGQILPTARRLFYACELTAEPRLQEPIFTAEITAPQDAMGGVYNCLNQRRGTINEEEQVQGTPMSIVKAFLPVAESFGFTALRGLTQGQA Thalassiosira_pseudonana HGKTLTDSLVQKAGIISSKAAGGARYTDTRKDEAERGITIKSTGISMFYLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIDGVCVQTETVLRQAISERVKPVLNKVDRALLELQLPAEELYQAFCRAIESVNVIVAMYNDQVDPTKGSVAFGSGLHQWAFTKRFAKTYGAKFNKMMAKLWGDWYFDAGRKVWRAFCQFIATPITTLFEAIMAEKHKKVEKMLKAILKSEEKELVGKALLKRVMQKWLPAGDTVLEMIVLHLPSPFKAQQYRVDTLYNGDATATAIRTCDTAPLCMYISKMVPTSDKGRFYGFGRVFSGTIATGQKVRILGPNYVPGKKTDLKNIQRTVIMMGRYTEQVADVPAGNTCALVGVDQYLLKTGTIVDAHTIKSMKFSVSPVVRCAVEPKNSADLPKLVEGMKRLSKSDPMVLCESGEHIIAASGELHLEICLQDLLADDFGWDVSEARKIWAFGEGTGPNLFVDTTKGVNYLLEIKESVVGGFAWATQNGPLCEEQMRGTRFNLMDVVLHADAIHRGMGQIMPTARRVCFSSMMTAEPGLLEPVYLCNISVPQDAMGNVYGVLTQRRGHVFSEEQRPGTPQMTLLAYLPVMESFGFTALRSNTGGKA Trichomonas_tenax HGKSLTDSLIARAGIISQENAGEMRFTDTRPDEQERCITIKSTGVSLYFLINLIDSPGHIDFSAEVTAALRVTDGALVVVDCIEGVCVQTETVLRQALSERIKPIVNKIDRSLLELNAEPEDMYQQYTKSIDMVNVIIATYTDTVSPAKGTVAFGSGLHSFGFTTKFARIYSTKFGKLIPQVWGERFYDPTSKCFRSFCQFILKPIVALSRAIMNGDKAKYTSMFKTLLHDDDLHKEGRELLSAVYRRWIPMSEALLEMIVLHLPSPVKAQAYRAETLYTGDACADAIRKCDPGPLMLYVSKMVPTSDKGRFYAFGRVFSGTVATGQRVRVMGANYVPGGKDDLTNIQRTVLMMGRKVENLRDCPCGNTIGLVGIDQYLVKSGTISEACPIKAMKFSVSPVVRVAVEPKVAQDLPKLVEGLNRLAKSDPCVQVETGEHIIAGAGELHLEICLKDLLQNDFGWEQNDARRVWSFGDSNGPNLIAGTTKSAEYLQEVKEHFVSAFQWATKLGVLAEEPLRGVRFNVVEVFLHADAAHRNGGQMVPTGRRVLYASEYTANPTLVEPVYLCEISAPITVCGGVHSILSKRRGRAFDQTQRDGTPLMNIKAYLPVMESFGFDKLRGATSGQA Triticum_aestivum HGKSLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLFYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLNKMDRCFLELQVEGEEAYQTFSRVIENANVIMATYEDQVYPEKGTVAFSAGLHGWAFTTNFAKMYASKFGKMMERLWGENFFDPATKKWRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLMKADEKELMGKALMKRVMQTWLPASNALLEMMIYHLPSPSKAQRYRVENLYEGDVYATAIRNCDPGPLMLYVSKMIPASDKGRFFAFGRVFSGRVATGMKVRIMGPNYVPGQKKDLKSVQRTVIWMGKKQESVEDVPCGNTVAMVGLDQFITKNATLTDACPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCESGEHIIAGAGELHLEICLKDLLSEEFGWDKDLAKKIWCFGETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSLRAATSGQA Trypanosoma_cruzi HGKSLSDSLVGAAGIIKMEDAGDKRIMDTRADEIARGITIKSTAISMHFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTETVLRQALTERIRPVVNKVDRAILELQLDPEEAYQGFVKTLQNVNVVISTYNDQVYPEKGTVAIGSGLQAWAFSTRFAKMYAAKFGKMCERLWGDNFFDAKNKKWRAFCQFCLDPIYQIFDAVMTEKQEKVDKMLKSLLTADEREQVPKKLLKSIMMKFLPAAEALLQMIVAHLPSPKKAQSYRAEMLYSGDKYYVGIKNCDPAPLMLYISKMVPTADRGRFFAFGRIFAGKVRSGQKVRIMGNNYIFGKKQDLKPVQRTVLMMGRYQEAVEDMPCGNVVGLVGVDKYIVKSATITSPHPLRDMKYSVSPVVRVAVEAKNPSDLPKLVEGLKRLSKSDPLVVCESGEHIVAGAGELHLEICLKDLLADKFDWDVAEARKIWCYGDNRGPNVVVDVTKGVQNMSEMKDSFVAAWQWATREGVLCDENMRGVRINVEDVTMHADAIHRGGGQIIPTARRVFYACCLTAAPRLMEPMFQVDIQTVEHAMGGIYGVLTRRRGVIIGEENRPGTPIYNVRAYLPVAESFGFTALRAGTGGQA ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M982] TITLE POL; LINK TAXA = Taxa4; DIMENSIONS NCHAR=888; FORMAT DATATYPE=Protein SYMBOLS= "A C D E F G H I K L M N P Q R S T V W Y" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Agrobacterium_tumefaciens EVEMPNLIEVQKASYDQLNAVFKSVFPITDSGAMLEFVSYEFEKFDVEECRQRDLTYAAPLKVTLRLIIKEQSVYMGDMPLMTNNGTFIVNGTERVIVSQMHRSPGVFFARVIPYRGSWLDIEFDAIVYARIDRRRLPVTSLLMALLYYLAEDIVYFFDAERYDLSAVGRVKMNMRLDDILAVVKMLVELRGIDDIDNLGNRRVRSVGELMENQYRLGLLRMERAIKERMSSIEDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQVNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESPYRKIIGKVTTDVIYLSAMEEAYYVAQAAELEGATEEFVVCRSGEVMLAPRDNINLMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLLRAEAPFVGTGMEPIVARDSAAIAARRGGVVDQVDATRIVIRYRLQKFQRSNQNTCVNQRPLVSVGDAISKGDIIADGPSTDLGDLALGRNALVAFMPWNGYNYEDSILMSERIVSDDVFTSIHIEEFEVMARDTKLGPERDIPNVSEEALKNLDEAGIVYIGAEVQPGGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTFGTIVEVRVFNRPPGVMMVKVFVAVKRKIQPGDKMAGRHGNKGVVSRIVPVEDMPFLEDGTHVDICLNPLGVPSRMNVGQILEHLAWACAVSIATPVFDGAHEPDVAAMLKKQSVLYDGRTGEPFDRKVTVGYMYMIKLNHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLSVELE Anaplasma_marginale SRFLTDLIRIQRDSYDAIQSIFEAMFPIRDLGKVLEFVGYNIGQYDEYECIKRGITFSVPIRITLRFVMKEQEVSIGDLPMMTSYGTFIINGIERVIVSQMHRSPGVFFARVIPYRGSWLDFEFDIIIYFRIDKKRLPVSYLLKALITFVAADLVPFFESERYDLSVVGRIKLNSHLGDIVQVVKKLVLLRGVDDIDHLGNRRVRSVGEFIENQFRIGILRLERMIMDYMSSVNDNAMPCDFVNPKVLATVLKDFFSSSQLSQFMDQTNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGQNIGLISSLAIYAKINKYGFIESPYRKVERVVTDKVEYLLAMQEGYYIADAAAINNRVDDMLYCRGGNFVMVKSEDVDYVDVSPKQIVSVAASLIPFLENNDANRALMGSNMQRQAVPLLKSEAPLVGTGMEFVVAAGSAVVLAKRDGIVHRVDGSYIVIRYRLRKFQRSNHNTCINQRPVVKLGDYVKANDLIADGSAIDRGELALGKNVLVAFMSWQGYNFEDSIVISSDVVKRDVFTSIHIEEFECVVRDTLRSREDNAVCLMYESLSHLDDVDIVPRYLQVVSGGQGYARPPVSLPPETKLLVTIFGEKVFDCVDSSLYLPPDVEGTVIDVHVFVRPQGVLIVKVFVAVKHNLQPGDKMAGRHGNKGVISRIVPAEDMPHLEDGTPVDIILNSLGVPSRMNIGQILEHLGWAAVVPMAAPVFEGPKDAQISKLLELQVYLYDGRLGKKFDRKITVGYIYMLKLHHLVDDKIHARSVGPYGLVTQQPLGGKSHFGGQRFGEMECWALQAYGAAYTLQEMLTVKSDDIVGRVKIYESIIKGDSNFECGIPESFNVMVKELRSLCLNVVLK Azotobacter_vinelandii DVDVPYLLAIQLDSYRELHAAFKSVFPIISSGNALEYVGYRLGAFDVKECVLRGVTFAVPLRVKVRLIIKEQEVYMGEIPLMTENGTFIVNGTERVIVSQLHRSPGVFFARIIPYRGSWLDFEFDPAVFVRIDRRRLPASVLLRALVLTSAKVIVPFFSAERYDLSAVGRMKFNRRIGDIVDVLKTLVDIRGVDDIDHLGNRRVRCVGEMAENQFRVGLVRVERAVKERLSMAEEGLMPQDLINAKPVAAAVKEFFGSSQLSQFMDQNNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLAAYARTNQYGFLESPYRVVKGQVTDEIVFLSAIEEAHVIAQAATLNGRIDELVAVRLNEFTVKAPEDVTLMDVSPRQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMERNVARDSVCVVARRGGVIDSVDASRIVVRYNLTKYTRSNQNTCINQRPLVSKGDQVARGDIMADGPSTDMGELALGQNMRVAFMPWNGFNFEDSICLSERVVQEDRFTTIHIQELTCVARDTKLGPEADIPNVGEAALNKLDEAGIVYVGAEVMAGGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPTGTKGTVIDVQVFTRAPGVLIVKVYLAIKRRIQPGDKMAGRHGNKGVVSVIMPVEDMPYDANGTPVDIVLNPLGVPSRMNVGQILEHLGLAAKVPMATPVFDGARETEIKAMLKLQMRLFDGRTGNQFERPTTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGDHRMEAGMPESFNVLIKEIRSLGIDIELE Bartonella_quintana EVEMPNLIEVQKASYDQLQAVFKSVFPISDSGTMLEFVGYEFDKFDVEECRQRDLTYAAPLKVILRLIIKEQGVYMGDMPLMTTNGTFIVNGTERVIVSQMHRSPGVFFARVIPNRGSWLDIEFDAIIYARIDRRRIPITSLLMALLLYLAEDIVYFFDPERYDLSAVGRVKMNLRMDDILAVVKMLVELRGIDDIDNLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVEDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESPYRKIIGKVTTEVIYLSAMEESHYVAQASSLEGRTDEFVVCRAGEVLMAPRDHVDLMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMESIVARDSAAVSAKRGGIVDQVDATRIVIRYRLQKFQRSNQSTCINQRPLVHVGDRVEKGNIIADGPSTDLGDLALGRNVLVAFMPWNGYNYEDSILLSERIVADDVFTSIHIEEFEVAARDTKLGPERDIPNVAEESLRNLDEAGIIYIGAEVQPGGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGAFGTVVEVRVFNRPPGVMMVKVFVAVKRKIQPGDKMAGRHGNKGVVSRILPIEDMPFLEDGTHADIVLNPLGVPSRMNVGQILEHLGWACAVSIATPVFDGAHEADINMMLEDQVVLYDGRTGEPFDRPVTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLALNVELD Brucella_melitensis EVEMPNLIEVQKASYDQLQAVFKSVFPIQDSGAMLEFVRYEFDKFDVDECRQRDLTYSAPLKVTLRLIIKEQDVYMGDMPLMTDNGTFIVNGTERVIVSQMHRSPGVFFARVIPYRGSWLDIEFDSIVYARIDRRRLPATTLLMALLFYLAEDVVYFFDSERYDLSAVGRVKMNMRLDDILAVVKMLVELRGIDDIDNLGNRRVRSVGELMENQYRVGLLRMERAIKERMSSIEDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESPYRKVVGKVTNDVVYLSAMEEAHSVAQAVELQGGVDEFVICRAGEVMMAPRENVDLMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEPIVARDSAAIAARRGGIVDQVDATRIVIRYRLQKFQRSNQSTCINQRPLVRVGDRIHKGDIIADGPSTDLGDLALGRNVLVAFMPWNGYNYEDSILLSEKIVSDDVFTSIHIEEFEVAARDTKLGPERDIPNVSEEALKNLDEAGIVYIGAEVHPGGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTYGTVVEVRVFNRPPGVMMVKVFVAVKRKIQPGDKMAGRHGNKGVVSRILPVEDMPFLEDGTHADIVLNPLGVPSRMNVGQILEHLGWACAVSIATPVFDGAVEADINAMLTDQSTLYDGRTGEPFDRQVTMGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELD Buchnera_aphidicola QVDIPYLLSIQLDSFKKLEAAFRSVFPICGNGNELQYVSYRLGIFDVKECQIRGATYSAPLRVRLRLVIKEQEVYMGEIPLMTNNGTFIINGTERVVVSQLHRSPGVFFARIIPYRGSWLDFEFDPNLFVRIDRRRLPVTIILRALILIVSKNYLPFFSEDRYDLSSVGRMKFNRSLLDIIDVIKKLIDIRGVDDIDHLGNRRIRSVGEMAENQFRIGLVRVERAVKERLSVGDDTLMPQDMINAKPISAAIKEFFGSSQLSQFMDQNNPLSEITHKRRISALGLGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYARTNSYGFLETPYRKVHRLVTDEIHYLSAIEEGYVIAQATNINNYIDDLVTCRKGESSLFNCNQVDYMDVSTQQIVSVGASLIPFLEHDDANRALMGANMQRQAVPTLKTDKPLVGTGMERAVAVDSVTVVAKRGGIIQYIDASRIIIKYNLTKYTRSNQNTCINQKPCVKLREKINKNDVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSEKVVQEDRFTTIHIQELSCISRDTKLGPESDIPNVGEAALSKLDESGIVYIGAEVTGGGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQIFTRAPGVLIVKVYLAVKRQIQPGDKMAGRHGNKGVISKINPVEDMPYDENGIPVDIVLNPLGVPSRMNIGQILEHLGMAAKMPISTPVFDGAQENEIKQMLKFQISLFDGRTGEKFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMPESFNVLLKEIRSLGINIELE Buchnera_aphidicolaXAA KVDIPYLLSIQLNSFQKLESAFRSIFPIRSNGNELQYINYKLGIFNVKECQTRGMTYSSPLRVKLRLVIKEQEVYMGEIPLMTTNGTFIINGTERVVVSQLHRSPGVFFARIIPYRGSWLDFEFDPNLFFRIDRRRLPISIILKALLIISAKNYFKFFSEERYDLSSVGRMKFNRSLQDIISVIKKLIDIRGIDDIDHLGNRRVRSVGEMAENQFRIGLIRVERAVKDRLSLGDDMLMPQDMINAKPISAAIKEFFGSSQLSQFMDQNNPLSEITHKRRISALGLGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNSYGFLETPYRKIHGKVTNEIKYLSAIEEGFIIAQATNLTGAVEDLITCRKGESSLFNKNQINYMDVSTQQIVSVGASLIPFLEHDDANRALMGANMQRQAVPTLRSEKPLVGTGMERAVAVDSVTIIAKRGGIVQYVDASRIIIKYNLKKYTRSNQNTCINQIPCISLGENVEKGNVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILISEKVVQEDRFTTIHIQELACISRDTKLGSESDIPNVGEAALSKLDESGIVYIGAEVNGGGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNGVLGTVIDVQIFTRAPGVLIVKVYLAVKRHIQPGDKMAGRHGNKGVISKINPIEDMPYDQNGLPVDVVLNPLGVPSRMNIGQILEHLGLASKIPISTPVFDGAQESEIKALLKLQITLFDGRTGEKFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNYKMEPGMPESFNVLLKEIRSLAINIELE Buchnera_sp KVDIPYLLSIQLNSFKKLEAAFRSVFPIRGNGNELQYVSYRLGIFDVKECQIRGATYSAALRVKLRLVIKEQEVYMGEIPLMTNNGTFIINGTERVVVSQLHRSPGVFFARIIPYRGSWLDFEFDPNLFVRIDRRRLPVSIILRALILIVSKNYVKFFSEDRYDLSTVGRMKFNRSLLDIIDVIKKIIDIRGVDDIDHLGNRRVRSVGEMAENQFRIGLVRVERAVKERLSIGDDALMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGLGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNSHGFLETPYRKVCGLVSEEIHYLSAIEEGYIIAQATNITGFTDDLVTCRKGESSLFNRNQVNYMDVSTQQIVSVGASLIPFPEHDDANRALMGANMQRQAVPTLKTDKPLIGTGMERAVAVDSVTAVAKRSGVVQYVDASRIVIKYNLTKYTRSNQNTCINQQPCVNLGEKIKKGDVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELSCISRDTKLGAESDIPNVGEAALSKLDESGIVYIGAEVTGGGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQIFTRAPGVLIVKVYLAVKRQIQPGDKMAGRHGNKGVISKINPVEDMPYDENGIPVDIVLNPLGVPSRMNIGQILEHLGMAAKIPISTPVFDGAQENEIKQMLKFQIILFDGRTGEKFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMPESFNVLLKEIRSLGINIELE Campylobacter_jejuni KQEIPNLLQLQKKSFDYIEKVFKSIFPIHDQNRSLEYVSSEIGKYTIRECMERGLTYSVNLKMKIRLTIKEQEIYIREIPLMTDRVSFIINGVERVVVNQLHRSPGVIFAQIIPDRGSWLYFEYDAVLYVRINKRRVPVTMLFRALLLYLANPIIKFFNPERYDLTKVGRMKMNHKLGDIIKTAKYLIKVKGIDDRDHLGNRRIRSIGELLANELHLGLAKMQKAIRDKFTSLNDKVMPYDLINPKMITTTIIEFFTGGQLSQFMDQTNPLSEVTHKRRLSALGEGGLVKERAGFEVRDVHATHYGRICPVETPEGQNIGLINTLSTYAKVNELGFVEAPYRKVVGKVTNEVVYLTATQEELFIAPATKVKGNVEEFVEARDGETILARREEVQLIDLCSGMVVGVAASLIPFLEHDDANRALMGSNMQRQAVPLLTASAPIVGTGMEQIIARDAEAVKAKRGGVVEKVDNKSIFILYTMEKNLRTNQNTNYIQHPIVKKGDIVKAGQIIADGPSMDQGELAIGKNALIAFMPWNGYNYEDAIVVSERIIREDTFTSVHIYEKEIEARELKDGIEKDIPNVKEEDVAHLDESGIAKIGTHIKPGGKVSPKGEVKPTPEERLLRAIFGEKAGHVVNKSLYATASLEGVVVDVKIFTKPSGVILVKVYIATKRKLKVGDKMAGRHGNKGIVSTIVPEVDMPYLPNGKSVDIALNPLGVPSRMNIGQILEHLGLVGLVKFSTPVFEGVNIEEFSKLFKMKTELYDGRTGEKIAERVHVGCMYMLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGAAHTLREMLTIKSDDVEGRFSAYKALTKGENVPATGIPETFFVLTNELKSLALDVEIF Caulobacter_crescentus EAQMPNLIEVQRSSYEQVEAVFKSVFPIKDNERVLEYVSYEFEKYDVEECIQRDMTFAAPLKVKLRLIIKEQDVYMGDIPLMTDKGTFIVNGTERVIVSQMHRSPGVFFARVIPYRGSWLDFEFDAIVYVRIDRRRLPATTFLYALLTYLARDAVMFFDAERYDLSSVGRVKMNMRLEDVLAVLKVLVGLRGIDDIDNLGNRRVRSVGELLENQYRVGLLRMERAIKERMSSVDDTVMPHDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATHARVNKYGFIESPYRRVKGKPQDEVVYMSAMEESHVIAQSIKVEGEVEDLVPGRNGEPTLLQKETVDLMDVSPRQVVSVAAALIPFLENDDANRALMGSNMQRQAVPLVQSDAPLVGTGMEAVVARDSAVVIAKRTGVVEQIDGTRIVIRYRMSKFQRSNQSTCINQRPLVKVGDRIVAGDIIADGPSTELGELALGRNALVAFMPWNGYNFEDSILISERIVRDDVFTSIHIEEFEVMARDTKLGPERDIPNVGEEALRNLDEAGIVAIGAEVQPGGKVTPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTIVDVRVFNRPPGVMMVKVFVAVKRKLQPGDKMAGRHGNKGVISRILPIEDMPFLADGTHVDVVLNPLGVPSRMNVGQIFEHLGWACAVPIATPVFDGARMDDIEGHLEMQSILFDGLTGEQFKRPVTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYESIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELE Coxiella_burnetii EIKTPYLLETQIESYRKLHAAFKSVFPITSSGYVLEYVGYSLGLFDVEECKLRGLTYAAPLKVNMRLVIKEQEVYMGEIPLMTETGSLVINGTERVVVSQLHRSPGVFFARVIPYRGSWLDFEFDPCLFVRIDRRRLPATVILRALLYVIGKTIIKFFSPERYSLSAVGRMKFNRRVGDIVDVLRVLVDIRGVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKDRLSLADENLMPQDLVNAKPVSAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHVTHYGRVCPIETPEGPNIGLINSLAVFARANEYGFLETPYRKVVRVVTDETEYLSAIEEGYYIAQATNVKGRVDDLISCRKGEFTLTTPDKINYMDVSPRQIVSVAAALIPFLEHDDANRALMGSNMQRQAVPTIRPETPLVGTGMERTVAVDSVTVIAKRSGVIDSVDASRIVVRYNLTKFTRSNQNTCINQHPIVEVGDKVQKGDVLADGPSTDIGELALGQNLLVAFMPWNGYNFEDSILISERLVEEDRFTTIHIQEFTCVARDTKLGPESDIPNVGESALAKLDESGIVHIGAEVNAGGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVTPGITGTVIDVRIFTRAPGVIIVKVYLAVKRRIQPGDKMAGRHGNKGVISTIVPIEDMPYLEDGTPVDIVLNPLGVPSRMNIGQVLEHLGWAAKVPISSPVFDGATEEEIKQLLKMQAALYDGRTGKKFDRSVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTRMYKNIVDGDHRMDAGMPESFNVLVKEIRSLAIDIGLE Desulfovibrio_desulfuricans VTPIPHLLNLQVDSYKKLEGVFRSVFPIEDNRTSLEYVSYEIGKYDQAECISKGLTYEAPIRIKVRLVIKEQDIYFGTLPLMTEKGTFIINGTERVIVNQLQRSPGIIFCRVIPMRGSWLDFDYDHILYVRIDRRRMPATILFKAMIAFLAEDIVEFRNPDYYDLSPVGRYKLNQRLGDILTAIRVLNHLKTADDIDHLGNRRVRPVGELVENQYRIGLVRMERAIKERMSLQESTLMPHDLINPKPVQAVLKEFFGTSQLSQFMDQTNALSEVTHKRRLSALGPGGLTRERAGFEVRDVHTSHYGRICPIETPEGPNIGLIVSLTTYAKVNDFGFIETPYRVVRGQVTDEVKYLDASSEHEVVAQAARLDHRVDEFVTTRRGDVIMSPREEVTLMDISPSQMVSISAALIPFLEHDDANRALMGSNMQRQAVPLLRSTKPIVGTGMEADVARDSACIIAEADGVVRYADADRIVVSYDLQKYHKSNQSSCFGQKPLVSRGQVIRKGDVLADGPGIEDGELALGKNLVVAFMPWCGYNFEDSILISERCVKEDVFTSVHIEEFEVVARDTKLGPERDIPNVGEDMLRNLDGSGIIRIGANVKPDGKITPKGETQLTPEEKLLRAIFGEKARDVKNTSLKVPPGIEGTVIDVKLFNRPPGVIMAKVHIAVKRKLNVGDKMAGRHGNKGVVSCILPQEDMPFFADGRPVDIVLNPLGVPSRMNIGQIMEHLGWAAKIVTKTPVFDGATEEQIWSWMEQKTELYDGRTGVRFHNRVTTGVMYILKLHHLVDEKIHARSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGAAYLLQEFLTVKSDDVTGRVKMYEKVVKGDNFLEAGLPESFNVLVKELMSLGLDVTLH Ehrlichia_chaffeensis IKSLTDLIKIQRDSYNAIKNIFQSMFPIQDLGRVLEFVSYSIGQYDEYECIKRGITFSVPIRIVLRFIIKEQEVSIGDLPTMTSHGTFIINGIERVIVSQMHRSPGVFFARIIPYRGSWLDFEFDIILYFRIDRKRLPVSLLLRALIQLVANDFPSIFEKGKYDLSTVGRIKLNDHLGDIIHVIKKLVLLRGVDDIDHLGNRRVRSVGEFIENQFRIGILRLERMIMDYMSSVNDNAMPCDFVNPKVLATVLKDFFSSSQLSQFMDQTNPLSEVTHKRRLSALSPGGLTRERAGFEVRDVHPTHYGRICPIETPEGQNIGLISSLAIYARINKHGFIESPYRKVDGVVTDKVEYLLAMQESYYIADAATLNNQVDDMLYCRDGNFVMVKREEVDYIDVSPKQIVSVAASLIPFLENNDANRALMGSNMQRQAVPLLKADAPLIGTGMESIVAAGSTVVLAKRGGIVHRVDGLYIVIRYNLRKFQRSNHNTCINQRPLVKPGDYVKANDVIADGSAIDQGELALGKNVLVAFMSWQGYNFEDSIVISSEVVKKDVFTSIHIEEFECVVRDTTLGPERSVPDINEDSLSHLDDVGIVNVGAEVSAGGKVTPRPPVSLPPETKLLVTIFGEKVFDCVDSSLYLPLDVEGTVVDVHVFVRPQGVLIVKVFVAVKHNLQAQEKWLGRHVIQGVISRIVPVEDMPYLEDGTPCDIILNSFGVYLRMNVGQILEHLGWASVVPMAAPVFEGPKDSQISNLLRLQVDLYDGRIGEKFDRKVTVGYIYMLKLHHLVDDKIHARSVGPYGLVTQQPLGGKSHFGGQRFGEMECWALQAYGAAYTLQEMLTVKSDDIVGRVKIYESIIKGDSNFECGIPESFNVMVKELRSLCLDVALK Escherichia_coli QVDVPYLLSIQLDSFQKLEAAFRSVFPIQSSGNELQYVSYRLGVFDVQECQIRGVTYSAPLRVKLRLVIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFARIIPYRGSWLDFEFDPNLFVRIDRRRLPATIILRALIAVVAKDYIEFFSEDRYDLSAVGRMKFNRSLLDIIDVMKKLIDIRGVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLSLGDDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTGVVTDEIHYLSAIEEGYVIAQASNLEGHVEDLVTCRKGESSLFSRDQVDYMDVSTQQVVSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSVTAVAKRGGVVQYVDASRIVIKYNLTKYTRSNQNTCINQMPCVSLGEPVERGDVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRDTKLGPEADIPNVGEAALSKLDESGIVYIGAEVTGGGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRAPGVLIVKVYLAVKRRIQPGDKMAGRHGNKGVISKINPIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILEHLGMAAKMPIATPVFDGAKEAEIKELLKLQIRLYDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMPESFNVLLKEIRSLGINIELE Geobacter_metallireducens KIDIPNLIDIQKNSYKRLEAVFKSVFPIKDSDTSLEYVSYSLGKYDVEECHQRGMTFAAPMKVKVRLVIKEQEVYFGEIPLMTENGTFIINGTERVIVSQLHRSPGVFYARVIPYRGSWLDFEFDHILYVRIDRRRMPATVLLKALVCYASTDIVPFFNAERYDLSAVGRLKLNYKLGDILEVVRYLIDLKGIDDIDHLGNRRVRAVGELLENQYRIGLVRMERAIKERMSLQEENLMPHDLINSKPVSAVVKEFFGSSQLSQFMDQTNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLIASLSTYARINEHGFVETPYRIVSGKVTAEVKFFSALEEEHAIAQAAEMDGRVNDYVSARSGEFLLVHRDELELMDVAPMQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLLKADSPLVGTGMERVVAKDSVSVVARHTGVVESVDASRIVVKYNLIKFARSNQNTCINQRPVVKVGDHVKRGDVIADGPSTDMGELALGQNVVVAFMPWGGYNFEDSILISEKLTKDDRYTSIHIEEFECVARDTKLGKESDIPNLGEETLKDLDESGIIRIGAEVKPGGKITPKGETQLSPEEKLLRAIFGEKAGDVRDTSLRVPPGVEGTVIGAKVFSRPPGVIMVKVYIAIKRKLQVGDKMAGRHGNKGVVSRILPEEDMPYMEDGRPVEIVLNPLGVPSRMNVGQILEHLGWAAKVPMASPVFEGASEEQIRSMLDKQVRLFDGKTGEPFKHKVTVGVMYVLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRLGEMEVWAMEAYGAAYALQEFLTVKSDDVAGRTRMYEAIVKGKHTLEPGLPESFNVLIKELQSLCLDVELL Haemophilus_somnus QVNVPYLLTIQLDSFDKLEAAFRSIFPIVSNGNELQYVSYQLGVFDVRECQIRGTTYAASLRVKLRLVIKEQEVYMGEIPLMTSNGTFVINGTERVVVSQLHRSPGVFFARIIPYRGSWLDFEFDPNLYARIDRRRLPATIILRALIVVSAKDYVLFFSSERYDLSAVGRMKFNRSLGDIVNVMRKLIDIRGVDDIDHLGNRRIRSVGEMAENQFRIGLVRVERAVKERLSLGDESVTPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHATHYGRVCPIETPEGPNIGLINSLSVYARTNDYGFLETPYRKVVGQVTEEIEYLSAIEEGYVIAQASNLELRTDAFVTCRHGESGLYRPEEIHYMDVSTQQVVSVAAALIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMEKPVALDSVAVVAKRGGTIQYVDASRIVVKYNLIKYTRSNQNTCINQIPCVQLGEPIERGEILADGPSTDLGELALGQNMRVAFMPWNGYNFEDSMLVSERVVQEDRFTTIHIQELSCVARDTKLGSEADIPNVGEAALSKLDESGIVYIGAEVKGGGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNGTSGTVIDVQVFTRAPGVLVVKVYLAVKRQIQPGDKMAGRHGNKGVISKINPVEDMPYDENGQPVDIVLNPLGVPSRMNIGQILEHLGLAAKMPLATPVFDGAHEKEIKALLELQITLFDGRTGEKFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVGGTHQMDPGTPESFNVIMKEIRSLGINIDLD Helicobacter_pylori TDEVPNLLLLQRDSYDSIEKVFKSIFPIQDHNRTLEYAGCEFGKYTVREAMERGITYSIPLKIKVRLIIKEQSIFIREIPLMTERTSFIINGVERVVVNQLHRSPGVIFGQIIPDRGSWLYFEYDSVLYARINKRRVPVTILFRAMLLHLAEPVMGFFDPERYDLTMVGRMKMNHKLGDIITTVKYLMKIKNIDDRDHLGNRRIRAVGELLANELHSGLVKMQKTIKDKLTTMSDSLMPHDLVNSKMITSTIMEFFMGGQLSQFMDQTNPLSEVTHKRRLSALGEGGLVKDRVGFEARDVHPTHYGRICPIETPEGQNIGLINTLSTFTRVNDLGFIEAPYKKVVGKVVGETIYLTAIQEDHIIAPATPIEGNLGDLIETREGEIVLNEKSKVTLMDLSSSMLVGVAASLIPFLEHDDANRALMGTNMQRQAVPLLRSDAPIVGTGIEKIIARDSGAIKANRAGVVEKIDSKNIYILYSLQKNLRTNQNTSFNQVPIVKVGDKVGAGQIIADGPSMDRGELALGKNVRVAFMPWNGYNFEDAIVVSECITKDDIFTSTHIYEKEVDARELKHGVEADIPDVKEEALAHLDESGIVKVGTYVSAGGKTSPKGEIKSTPEERLLRAIFGDKAGHVVNKSLYCPPSLEGTVIDVKVFTKPNGVIKVKLYIATKRKLKVGDKMAGRHGNKGIVSNIVPVADMPYTADGEPVDIVLNPLGVPSRMNIGQILEHLGLVGKVKMAIPVFEGISQEKFYKLFELKMDLYDGRTGEKMRERVNVGYMYMIKLHHLVDEKVHARSTGPYSLVTHQPVGGKALFGGQRFGEMEVWALEAYGAAHTLKEMLTIKSDDIRGRENAYRAIAKGEQVGESEIPETFYVLTKELQSLALDINIF Legionella_pneumophila DIPIPNLLEIQLKSYRDLHAAFSSVFPIESSGNRLEYVGYKLGAFDVRECKLRGLTYSAPLRVKIRLVIREQDVFMGEIPLMTDVGTFVVNGTERVVVSQLHRSPGVIFARIIPYRGSWLDFEFDPCVYVRIDRRRLPVTILLRALLITLAKNIITFFVEERYDLSAVGRMKFNRRVGDILSVIKTLIDIRGVDDIDHLGNRRVRSVGEMTENQFRVGLVRVERAVKERLSLVEENLMPQDLINAKPVSAAIKEFFGSSQLSQFMDQVNPLSGVTHKRRVSALGPGGLTRERAGFEVRDVHTTHYGRVCPIETPEGPNIGLINSLSVYARTNEYGFIETPCRKVVGRVTDEVEYLSAIEEVQYIAQSVELQGNLADLVPCRQNEFSLTTPDKINYMDVSPKQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRSEKPLVGTGMERIVASDSVSVVAKRGGVIDLVDASRIVVRYNLTKYFRSNQDTCINQRPIVSTGDRIQRGDVLADGPCTDMGELALGQNLLVAFMPWNGYNFEDSILISERIVHDDRFTTIHIEELTCIARDTKLGTEADIPNVGESALSNLDESGVVYIGAEVKAGGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPSGMNGTVIDVQVFTRAPGVLIVKVYLAVKRRIQPGDKMAGRHGNKGVISIVVPVEDMPHMEDGTAVDIVLNPLGVPSRMNIGQVLEHLGLAAKVPMATPVFDGATEQEIKSMLQLKTVLIDGRTGNKFDNPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVGGRTKIYKNIVDGDHRMDPGMPESFNVLLKEIRALGIDIELE Magnetococcus_sp SIDIPNLISVQKESFVRLHGVFLSVFPIHDAGTSLEYVSYALGKYDVDECLQRGMTFSAPLKVAFRLVIKEQDVYLGEIPLMTNTGTFIINGTERVIVSQMHRSPGVFFARVIPYRGSWLDFEFDPLLFARIDRRRLPVTTLLRAMLIFVARNMSDFFNSDRYDLSTVGRLKMNSRLSDILGVVDILLKLKGVDDIDHLGNRRVRSVGELLENQVRIGLVRMERAIRERMSSAEDQLVPHDVMNSKPFSAVIREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGMTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLSTYARINEFGFIESPYRQVKGTPIDQVDFLSAIDEEYIIAQAAKLEASEDALIQCRKLEFMVATPDRVNYQDVSPKQTVSVAASLIPFLENDDANRALMGSNMQRQAVPLIKTDAPLVGTGIESVVARDSVTITARRTGVVDEVDAARIVVKYNLTKFSRSNQNTCINQVPLVKNGERVTAGDIIADGPSTQIGELALGRNVLVAFMPWNGYNFEDSILISERLVAEDVFTSIHIDEFEVMARDTKLGAERDMPNVGEDALRNLDESGIIYVGAEVKPGGKVTPKGETQLTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTVVDVRVFSRPPGVLMVKVYIAVKRKLQPGDKMAGRHGNKGVISKINPLEDMPYMANGTPVDIVLNPLGVPSRMNVGQILEHLGWAARVPTATPVFDGAIESDISSWLNKQIQLIDGRTGEPFDRHVTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKIYESIVKGDDTFEAGVPESFNVLVKELQALALDVTLQ Mesorhizobium_loti EVEMPNLIEVQKASYDQLQAVFKSVFPISDSGSMLEFVKYEFEKFDVDECRQRDLTYAAPLKVTLRLIIKEQDVYMGDMPLMTLNGTFIVNGTERVIVSQMHRSPGVFFARVIPYRGSWLDIEFDSVVHARIDRRRIPVTSLLMALLLYLAEDIVYFFDSERYDLSAVGRVKMNMRLEDILAVVKTLVELRGIDDIDNLGNRRVRSVGELMENQYRVGLLRMERAIKERMSSIEDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESPYRKIVGKLTNDVVYLSAMEEAHHVAQAAELNGGVDEFVICRAGEVMMAPRENVDLMDVSPKQMVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEPIVARDSAAIGARRGGIVDQVDATRIVIRYRLMKFQRSNQNTCINQRPLVRMGDRVNKGDIIADGPSTELGDLALGRNVLVAFMPWNGYNYEDSILLSERIVADDVFTSIHIEEFEVMARDTKLGPERDIPNVSEEALKNLDEAGIVYIGAEVQPGGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTFGTVVEVRVFNRPPGVMMVKVFVAVKRKMQPGDKMAGRHGNKGVVSRIVPVEDMPFLEDGTHADIVLNPLGVPSRMNVGQILEHLGWACAVSIATPVFDGAHEADINIMLEQQSQLYDGRTGEPFDRKVTMGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELE Microbulbifer_degradans DVEVPYLLAIQLDSYRKLHAAFKSIFPIVSSGNALEYVSYALGVFDVKECVLRGATYAVPLRVKVRLIIKEQEVYMGEIPLMTDNGTFVVNGTERVIVSQLHRSPGVFFARVIPYRGSWLDFEFDPLVFVRIDRRRLPASILLRALMVALAKDIIAFFSSERYDLSAVGRMKFNRRLGDIVDVLKTLIDIRGVDDIDHLGNRRVRSVGEMAENQFRVGLVRVERAVKERLSMAEEGLMPQDLINAKPVAAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLATYARTNSYGFLESPHRKVVGKVTDEIEYLSAINEAFVIAQAAAQNGETEELVSVRQNEFTLKGPSEVQYMDVSPRQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLKAQKPLVGTGMERNVAADSVCVVAKRGGVIERVDAARIVVRYNLTKYTRSNQNTCINQRSIVRTGEKVSRGDILADGPSVDLGELALGQNMRIAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELTCIARDTKLGSEADIPNVGEGALSKLDESGIVYVGAEVASGGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSSVKGTVIDVQVFTRAPGVLIVKVYLAIKRRIQPGDKMAGRHGNKGVISVIMPVEDMPYDENGNPIDIVLNPLGVPSRMNVGQVLEHLGLAAKVPMATRAFDGAKEKEIKQLLTLQMTLFDGRTGDPFQRPTTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKMYKNIVDGDHRMEPGMPESFNVLVKEIRSLGINIELE Neisseria_meningitidis NVEVPFLLATQIDSYAKLQAAFNSIFPIVSNGYRLEFVHYTLGLFDIPECQLRGITYAAPLRARIRLVVRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVFFARIIPYRGSWLDFEFDPLLYFRIDRRRMPVTILLKALLLALAADLISFFSEDSYDLSRVGRMKFNTRTYDIVASIATLVELRGVDDIDHLGNRRVRSVGELTENQFRSGLARVERAVKERLNQAEENLMPHDLINAKPVSAAIKEFFGSSQLSQFMDQTNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYARTNDYGFLETPYRRVIGKVTEEIDYLSAIEEGYVIAQAADLDGNIGDLVTCRKGETIMATPDRVQYMDVATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPEKPMVGTGIERSVAVDSTAIVARRGGVVEYVDANRVVVRYNLVKFTRSNQSTNINQRPAVKAGDVLQRGDLVADGASTDLGELALGQNMTIAFMPWNGYNYEDSILISEKVAADDRYTSIHIEELNVVARDTKLGAERDIPNLSERMQNRLDESGIVYIGAEVEAGGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQVFTRQPGVQMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLNPLGVPSRMNIGQILEHLGWAAKASFASPVFDGAKESEIREMLNLQITLYDGRSGEAFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYENIVKGEHKIDAGMPESFNVLVKEIRSLGLDIDLE Nitrosomonas_europaea SIPFPFLLATQIQSYTDLQAAFNSVFPIESSNNRLDFISYMLGVFDVKECQQRGLTYAAPLRARVRLTVKEQEVYMGEIPLMTDTGSFVVNGTERVIVSQLHRSPGVFFARIIPYRGSWLDFEFDPYVYFRIDRRRMPVTTLLKAMLLILAADLVKFYSPERYDLSVVGRMKFNRRVGDIIDVIKILVELRGIDDIDHLGNRRVRSVGELAENQFRAGLARVEKAVKERLSQAEENLMPHDFINAKPVSSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYARTNEYGFIETPYRMVRGRVTEEVVYLSAIEESYVIAQAANFNGVTDEVVSCRKNEFTLASRDQIEYVDIAPAQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRAEKPLVGTGIERVVAVHSTAVRTIRGGVVDYVDASRIVIRYNLTKYTRSNQNTNINQRPIVRMGDVLSRDDVIADGASTDLGELALGQNMLIAFMPWNGLNFEDSILISERVVSDDRFTSIHIEELAAVSRDTKLGTEADIPNLSERQRARLDESGIVYIGAEVEAGGKVTPKSETQLTPEEKLLRAIFGEKASDVKDTSLHVPAGISGTVIDVQIFTRPPGVQMVKVYIAVKRRLQSGDKMAGRHGNKGVISKIVPIEDMPYMADGTPVDVVLNPLGVPSRMNIGQVLEHLGWAAKVPFATPVFDGAHESEIKQMLKLQTTLYDGRTGEAFDRPVTVGYMHVLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYTLQEMLTVKSDDVNGRTKVYESIVKGDHKIDAGMPESFNVLVKEIRSLGLDIDLE Novosphingobium_aromaticivorans EVQMPNLIEVQRESYEQLEKTLRSVFPIQDAGTSLDIKEYVLEKYDVNECRQRGITYAAPMKVTLKLAIKEQDVYMGDIPLMTENGTFFINGTERVIVSQMHRSPGVLFARVIPYRGSWLDFEFDAIVNVRIDRKRLPVTALLHALIFYAARDLIEFFDGDRYDLSAVGRVKLNMRLGDILAVVKELVNLKGVDDIDNLGNRRVRSVGELLENQYRVGLLRMERAVKERMSSVDSTVMPNDLINAKPAVAAVREFFGSSQLSQFMDQTNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLSTFARVNKYGFIETPYRKVVGKVTKDVIYLSAMEEQHTVAQAAELDGSVEELVSARNGEFVMAPRDTVTLMDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLIKADAPFVGTGMEETVARDSAAISALRSGVVDQVDATRIVIRYRLQKFERSNQSTCINQRPLVKVGDLIEKGDIIADGPSTEFGELALGRNVLVAFMPWNGYNYEDSILISERIVKEDVFTSIHIEEFEVMARDTKLGPERDIPNVGEEALRNLDEAGIVYIGAEVHPGGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTIVDVRVFNRAPGVLMVKVFVAVKRKLQPGDKMAGRHGNKGIISRILPQEDMPFLEDGTPVDFVLNPLGVPSRMNVGQIFEHLGWAARVPMGSPVFDGAVEKDVTDMLRLQVTLFDGRTGDAFDRKVTVGMKYVLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALQAYGAAYTLQEMLTVKSDDVVGRTKVYEAIVKGDDTFEAGIPESFNVLVKEMRSLGLNVELS Pasteurella_multocida QVNVPYLLTIQLDSFDKLEAAFRSVFPIVSNGNELQYVSYQLGVFDVRECQIRGTTYAAPLRVKLRLVIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFARIIPYRGSWLDFEFDPNLYARIDRRRLPATIILRALIVVAAKDYVLFFSSDRYDLSAVGRMKFNRSLGDIIGVMKKLIEIRGVDDIDHLGNRRIRSVGEMAENQFRIGLVRVERAVKERLSLGDDAVTPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHATHYGRVCPIETPEGPNIGLINSLSVYARTNDYGFLETPYRKVVGQVTEEIEYLSAIEEGYVIAQASNLELRTDAFVTCRHGESGLYRPDEIHYMDVSTQQVVSVAAALIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGIEKAVAVDSVTVIAKRGGMVQYVDASRIVVKYNLVKYTRSNQNTCINQIPCVSLGEPIGRGEVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSMLVSERVVQEDRFTTIHIQELSCVARDTKLGSEADIPNVGEAALSKLDESGIVYIGAEVKGGGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNSVSGTVIDVQVFTRAPGVLVVKVYLAVKRQIQPGDKMAGRHGNKGVISKINPVEDMPYDENGQPVDIVLNPLGVPSRMNIGQILEHLGLAAKLPLATPVFDGAHESEIKGLLELQITLFDGRTGEKFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVGGTHQMDPGTPESFNVIMKEIRSLGINIDLD Pseudomonas_aeruginosa DVDVPYLLAIQLDSYRELHAAFKSVFPIISSGNALEYVGYRLGAFDVKECVLRGVTFAVPLRVKVRLIIKEQEVYMGEIPLMTENGTFIINGTERVIVSQLHRSPGVFFARIIPYRGSWLDFEFDPCVFVRIDRRRLPASVLLRALLITIAKAIVPFFSAERYDLSAVGRMKFNRRIGDIIDVLKTLVDIRGVDDIDHLGNRRVRCVGEMAENQFRVGLVRVERAVKERLSMAEEGLMPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLATYARTNKYGFLESPYRVVKSLVTDEIVFLSAIEEAHVIAQAATLKGQVDELVAVRLNEFTVKAPEDVTLMDVSPKQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMERNVARDSVCVVARRGGVIDSVDASRVVVRYNLTKYTRSNQNTCINQRPLVSKGDVVARGDILADGPSTDMGELALGQNMRVAFMPWNGFNFEDSICLSERVVQEDRFTTIHIQELTCVARDTKLGPEADIPNVGEAALNKLDEAGIVYVGAEVQAGGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPTGTKGTVIDVQVFTRAPGVLIVKVYLAIKRRIQPGDKMAGRHGNKGVVSVIMPVEDMPHDANGTPVDIVLNPLGVPSRMNVGQILEHLGLAAKVPMATPVFDGAKEREIKAMLKLQMRLFDGRTGNQFERPTTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGDHRMEAGMPESFNVLIKEIRSLGIDIELE Ralstonia_metallidurans TVQVPFLLATQIESYTQLQAAFNAIFPISSNGLRMEFVSYHLSPFDVKECQQRGLTFHSALRAKVRLIVKEQEVYMGEIPLMTSTGSFVINGTERVIVSQLHRSPGVFFARIIPYRGSWLDFEFDPILYFRVDRRRMPVTILLKSILLVLAKNIIPFYSEESYDLSRVGRMKVNSRLSDILETIKILVNLRGVDDIDHLGNRRVRCVGELAENQFRAGLSRVERAVKERLGQAEENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYARLNEYGFLETPYRKVESKLTDQVDYLSAIEEGYVVAQAATVEGNIDELVSARGSETRMVTPDRVQYIDVAPSQIVSAAASLVPFLEHDDANRALMGANMQRQAVPCLRPDKPLVGTGIERTVAVDSTAVQATRGGVVDYVDAMRVVIRYNLIKYTRSNQNTNINQRPMVKVGDIVARGDVIADGASTDLGELALGQNMLVAFMPWNGYNFEDSILISERVVAEDRYTSIHIEELSVVARDTKLGPERDISNLAEAQLARLDESGITYIGAEVEAGGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGIVIDVQVFTRPPGVIMVKVYLAVKRRLQPGDKMAGRHGNKGVVSKIVPIEDMPYMADGTPADIVLNPLGVPSRMNVGQILEHLGWAARVPFATPVFDGAHEAEIRRMLDLQVTLHDGRTGEAFERPVTLGVMHMLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVKSDDVNGRTKVYENIVKGEHSIDAGMPESFNVLVKEIRSLGIDIDLD Rhodobacter_capsulatus EVEMPNLIEVQKASYDLIQGVFQSVFPIKDNDNILEFVKYELEKYDVDECMSRDLTYSAPLKVTLRLIIKEQDVYMGDMPLMTPNGTFIVNGTERVIVSQMHRSPGVFFCRIIPYRGSWLDFEFDALVFARIDRRRLPVTTLLYALILYCAKDIIEFFDSERYDLSAVGRVKMNMRLDDIIACIKGLVELRGIDDIDHLGNRRVRSVGELMENQYRVGLLRMERAIKERMSSVEDTVMPQDLINAKPAAAAVREFFGSSQLSLFMDQTNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRMCPIETPEGQNIGLINSLATFARVNKYGFIETPYRKVHGQVTDEVVYMSATEEMHTIAQAATLNGKVNDLVSTRAGEFMLNPVEAVDLIDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLLRNEAPFVGTGMEATVARDSAAIMARRGGIVDQVDASRIVIRYRLRKFKRSNQSSTINQRPIVKVGDIVAKGQVVADGPSTDQGELALGRNVVVAFMPWNGYNYEDSILISERIHRDDVFTSIHIEEYEVAARDTKLGPERDIPNVGEEALRNLDEAGIVYIGAEVGPGGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGAYGTIVEVRVFNRPPGVMMVKVFVAVKRKLQAGDKMAGRHGNKGVVSKVVPIEDMPFLADGTPVDLVLNPLGVPSRMNVGQILEHMGWASRVPIATPVFDGAKEADVNDALIRQSIVFDGRTGDQFARPVTVGVKYFLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYESIVKGEDNFEAGVPESFNVLVKEVRGLGLNMELL Rhodopseudomonas_palustris EVEMPNLIEVQKASYDQLQAVFRSVFPISDSNAMLEFVRYEFEKYDVDECRQRGMTYAAPLKVTLRLIIKEQDVYMGDIPLMTMNGTFIVNGTERVIVSQMHRSPGVFFARIIPYRGSWLDIEFDAIVYARIDRRRLPVTSLMFALLVYLAEDLVPFFDAERYDLSAVGRVKMNMRLDDILAVIKTLVGLRGIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFVETPYRKVKGRVTDEVVYLSAMEEGYAVAQAVSLKGKTDDLVVCRGGDVVPMPADQVDYMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEGVVARDSAAIAARRTGIIDQIDATRIVIRYRLMKYQRSNQSTCINQRPLVKVGDHVKKGDIIADGPSTDLGELALGRNVLVAFMPWNGYNFEDSILLSERIVKEDVFTSIHIEEFEVMARDTKLGPERDIPNVSEEALKNLDEAGIVYIGAEVRAGGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVQGTIVEVRVFNRPPGVMMVKVFVAVKRKIQPGDKMAGRHGNKGVVSKIVPIEDMPFLEDGTHADIVLNPLGVPSRMNVGQILEHLGWACAVPIATPVFDGAKEADIEEMLKLQSTVYDGRTGDQFDRRVTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVDLH Rickettsia_conorii LVDIPNLIEIQKNSYEKLQSILNSIFPISDSNINLEFVKYEFDKYDVEECSQRSLSYAAPPKVTLRLSIKEQEVYMGDIPLMTKNGTFIINGTERVVVSQMHRSPGVFFARVIPYRGSWLDLEFDAVIYFRIDRKRLYTTTLLRAILIYLSEDLRPFFDTERYDLSEVGRIKMNSRLEDIKNIVRVLVELKGIDDIDHLGNRRVRSVGELIENQFRIGLVRMEKSVIERMSAGDDTVMPHDLVNSKILVSVVKEFFSTSQLSQFMDQTNPLSEITHKRRLSALGPGGLSRDRAGFEVRDVHPTHYGRICPIETPEGQNIGLINSMATYARINKHGFIESPYRRVKGCVTDEVVYLSAIEEGYKIGQASKIDGKQGEFINCRGGNFVMVEPYEVDFIDVTPMQVVSVAASLIPFLENDDANRALMGSNMQRQAVPLIKTDAPFVGTGVEGVVAKDSASVLALHDGIVEQVDSNRIVIRYNLLKFQKSNHNTCINQKPLVKVGHYVKKNDIIADGPSTDNGEIALGRNVLVAFLPWNGYNFEDSILISERIVKEDVFTSIHIEEFEVIARDTRLGPERDIPNVSEEALRHLDEVGIIYIGAEVKAGGKVTPKSESPITPEEKLLRAIFGEKAFDVEDSSLHVPSGVSGTVVEVRVFSRPQGALVVKVFIATKHKLQPGDKMAGRHGNKGVISRIVPEEDMPFLEDGTVVDIVLNPLGLPSRMNIGQILEHLGWASIVHFATPVFDGAKVQDVKDMLKLQVKLIDGRTGEYFDRLVTVGQKYLLKLHHLVDNKIHSRSIGPYSLVTQQPLGGKSHFGGQRFGEMECWALQAYGAAYTLQEMLTVKSDDVNGRIKTYDSIVRGENNFESGIPESFNVMIKEFRSLCLNVKLE Shewanella_oneidensis QVDIPYLLSIQLDSFKKLEAAFRSVFPIKSSGNELQYVSYKLGVFDVKECQIRGVTYSAPLRVKLRMVIKEQEVYMGDIPLMTDNGTFVINGTERVIVSQLHRSPGVFFARIIPYRGSWLDFEFDPALFVRIDRRRLPATIILRALIVYAAQDYIPFFSEERYDLSKVGRMKFNRRLSDIVAVMKNIIHIRGVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVRERLSLGDNELMPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHPTHYGRLCPIETPEGPNIGLINSLASFARTNSYGFLETPYRKVVGVITDEVEYLSAIEEGYVIAQAIEVEGRVEEQIACRKGESTFMRASDIQYMDVSPQQIISVAASLIPFLEHDDANRALMGANMQRQAVPTLRSEKPLVGTGIERTLAVDSVVVAAKRGGVIDYVDASRIVVKYNLTKYTRSNQNTCINQRPCCSVGEPVVRGDVLADGPSTDLGDLALGQNMRIAFMPWNGYNFEDSILISERVAQEDRFTTIHIQELSCIARDTKLGSEADIPNVGESALSKLDESGIVYIGAEVKGGGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNSVKGTIIDVQVFTRAPGVLIVKVYLAVKRTIQPGDKMAGRHGNKGVISKINPIEDMPYDEQGNPVDIVLNPLGVPSRMNIGQVLEHLGAAAKIPVATPAFDGAKEKEIKQMLELQLKLFDGRTGNEFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTQMYKNIVDGNHQMQPGMPESFNVLLKEIRSLGINIELD Shewanella_violacea KVDIPYLLSIQLDSFKKFEAAFRSVFPIKSSGNELQYVSYKLGVFDVKECQIRGITYAAPLRVKLRMVIKEQEVYMGDIPLMTNNGTFVINGTERVIVSQLHRSPGVFFARIIPYRGSWLDFEFDPALFVRIDRRRLPASIMLRALIEIAGQDYIPFFSEERYDLSKVGRMKFNRRLSDIVAVMKNIITIRGVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVRERLSLGDNELMPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHPTHYGRLCPIETPEGPNIGLINSLASFARTNSYGFLETPYRKVEGVVTDQIDYLSAIEEGYVIAQAIDINGRLEEQVACRKGDSTFMRGTDIQYMDVSPQQIISVAASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGIERIIAVDSVVVVAKRGGSIDYVDASRIVVKYNLTKYTRSNQNTCINQRPCCSVGDPVVVGDVLADGPSTDLGDLAFGQNMRIAFMPWNGYNFEDSILISERVAQEDRFTTIHIQELSCIARDTKLGSEADIPNVGESALSKLDESGIVYIGAEVKGGGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNSVKGTIIDVQVFTRAPGVLIVKVYLAVKRTIQPGDKMAGRHGNKGVISKINPVEDMPYDENGNPIDIVLNPLGVPSRMNIGQILEHMGAAAKIPIATPAFDGAKEKEIKEMLALQRTLYDGRTGNEFERKVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTQMYKNIVDGNYQMQPGMPESFNVLLKEIRSLGINIELD Sinorhizobium_meliloti EVEMPNLIEVQKASYDQLQAVFKSVFPIKDSGAMLEFVSYEFEKFDVEECRQRDLTYAAPLKVTLRLIIKEQNVYMGDMPLMTDNGTFIVNGTERVIVSQMHRSPGVFFARVIPYRGSWLDIEFDAIVHARIDRRRIPVTSLLMALLYYLAEDVVFFFDAERYDLSAVGRVKMNMRLDDILAVVKMLVELRGIDDIDNLGNRRVRSVGELMENQYRLGLLRMERAIKERMSSIEDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQVNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESPYRKIVGKVTNDVVYLSAMEEAYHVAQASVLDGSSEEFVVCRAGEVMLAPRDNINLMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLLRAEAPFVGTGMEPVVARDSAAIAARRGGIVDQVDATRIVIRYRLQKFQRSNQNTCVNQRPLVTVGDVINKGDIIADGPSTDLGDLALGRNALVAFMPWNGYNYEDSILLSERIVRDDVFTSIHIEEFEVMARDTKLGPERDIPNVSEEALKNLDEAGIVYIGAEVQPGGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTFGTVVEVRVFNRPPGVMMVKVFVAVKRKIQPGDKMAGRHGNKGVVSRIVPIEDMPFLEDGTHVDVVLNPLGVPSRMNVGQILEHLGWACAVSIATPVFDGAVEADVNEMLEQQSTLYDGRTGETFDRQVTVGYIYMLKLNHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLSVELE Vibrio_cholerae QVDIPYLLSIQLDSFEKLEAAFRSVFPIQSNGNELQYVSYRLGVFDVKECQIRGVTYSKPLRVKLRLVIKEQEVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVFFARIIPYRGSWLDFEFDPNLYVRIDRRRLPASIILRALIVVSAKDYVEFFSAERYDLSTVGRMKFNSSIGDIIEVMKKLISIRGVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLSLGDDNVMPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHVTHYGRLCPIETPEGPNIGLINSLSAFARCNEYGFLETPYRRVVGVVTDEVDYLSAIEEGFVIAQAAKLEGGADELVTARKGESGLHPREHVDYMDVATNQVVSIAASLIPFLEHDDANRALMGANMQRQAVPTLRSEKPLVGTGIERNVAVDSVTAVAKRGGVIQSVDASRIVVKYNLTKYTRSNQNTCINQRPCVMPGEPVARGDVLADGPSTDLGELALGQNMRIAFMPWNGYNFEDSILVSERVVQDDRFTTIHIQELSCVARDTKLGAEADIPNVGEAALSKLDESGIVYIGAEVKGGGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPNSVAGTVIDVQVFTRAPGVLIVKVYLAVKRRIQPGDKMAGRHGNKGVISKINPVEDMPYDENGQPVDIVLNPLGVPSRMNIGQILEHLGLAAKLPVATPVFDGAPESSIKAMLELQLTLFDGRTGDAFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHAMEPGMPESFNVLLKEIRSLGINIELE Vibrio_parahaemolyticus QVDIPYLLSIQLDSFDKLEAAFRSVFPIQSNGNELQYVSYRLGVFDVKECQIRGVTYSKPLRVKLRLVIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFARVIPYRGSWLDFEFDPNLYVRIDRRRLPASIILRALIVVASKDYIEFFSEERYDLSTVGRMKFNSSIGDIIEVMKKLIAIRGVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLSLGDDAVMPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHVTHYGRLCPIETPEGPNIGLINSLSAFARCNEYGFLETPYRRVVGVVTDEVDYLSAIEEGFVIAQAAKLDGTADELITARKGESGLHPREHAQYMDVATNQVVSIAASLIPFLEHDDANRALMGANMQRQAVPTLKADKPLVGTGIERNVAVDSVTAVAKRGGVIQSVDASRIVVKYNLTKYTRSNQNTCINQRPCVMPGEPVARGDVLADGPSTDLGELALGQNMRIAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELTCVARDTKLGSEADIPNVGESALSKLDESGIVYIGAEVKGGGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPNSVSGTIIDVQVFTRAPGVLIVKVYLAVKRRIQPGDKMAGRHGNKGVISKINPVEDMPYDEKGQPVDIVLNPLGVPSRMNIGQILEHLGLAAKLPIATPVFDGAPEASIKALLELQLTLFDGRTGDAFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHSMEPGMPESFNVLLKEIRSLGINIELE Wigglesworthia_brevipalpis QVDIPYLLAIQINSFKKLEAAFKSIFPIKSSGNELKYISYRLGVFNVKECQTRGTTFSAPLRVILQLIIKEQEVYMGEIPLMTDNGTFIINGTERVVVSQLHRSPGVFFARIIPYRGSWLDFEFDAHLFIRIDRRRLPVTVLLKALIIVSAKNYFKFFSEDRYDLSSVGRMKFNKSLSDIIEVTKKLIDIRGVDDIDHLGNRRIRSVGEMAENQFRIGLVRVERAVKERLSLGDDTIMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYARTNEYGFLETPYRCVLGIVTNNIHYLSAIEEGFIIAQATNLNGYINEFVTCRKGESSLFNRNQVNYMDVSTQQIVSVGASLIPFLEHDDANRALMGANMQRQAVPTLMTEKPLIGTGMERAVAVDSVTAVAKRGGIVQFLDSSKIIIKYHLTKYVRSNQNTCINQTPCVCLNDVVERGDVLADGPSTDLGELALGQNMRIAFMPWNGYNFEDSMLVSEKVVHEDRFTTIHIQELACMSRDTKLGSESDIPNVSETSLLKLDESGIVYIGAEVKGGGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNGVSGTVIDVEIFTRAPGVLIVKVYLAVKRQIQPGDKMAGRHGNKGVISKINPIEDMPYDENGVPVDMVLNPLGVPSRMNIGQILEHLGLAAKMPIATPVFDGAQEIEIKELLKFQITLFDGQTGEKFDRPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYSLQEMLTVKSDDVNGRTKMYKNIVDGSHLMEPGMPESFNVLLKEIRSLGINIELE Xanthomonas_axonopodis SIEVPFLLAIQVDSYRELHAALKSVFPISSSGNALEYVGYKLGVFDERECRQRGMSYGAPLRVTVRLVVKEQEVYLGEIPLMTGNGTFIVNGTERVIVSQLHRSPGVFFARIIPYRGSWLDFEFDPALFTRIDRRRLPVSILLRALLVILSHDVVGFFTFERYDLSTVGRMKFNRRVGDILEVIKVLTEIRGVDDIDHLGNRRVRSVGEMAENVFRVGLVRVERAVKERLSMAEEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCTIETPEGPNIGLINSLAVFARTNQYGFLETPYRKVLGKVSDDVEYLSAIEENYVIAQAALTKNMTEQFVPCRQGESLLKPPSEVHFMDVSPMQTVSVAAALVPFLEHDDANRALMGANMQRQAVPTLRSQKPLVGTGIERAVARDSVTVNALRGGVIEQIDAARIVVKYNLIKYTRSNQNTCINQRPLVNVGDVIARGDVLADGPSTDIGELALGQNMLIAFMPWNGYNFEDSILLSERVVEEDRYTTIHIEELTCVARDTKLGPEADIPNVSEQALNRLDESGVVYIGAEVRAGGKVTPKGESQLTPEEKLLRAIFGEKASDVKDSSLRVPPGMDGTVIDVQVFTRAPGVLMVKVFLAVKRRIQPGDKMAGRHGNKGVVSNVVPVEDMPYMATGESVDIVLNPLGVPSRMNIGQILEHLGWAAKVPMATPVFDGASEAEIKRMLELQTQLYDGRTGEAFDRKTTVGYMHYLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVQGRNQMYKNIVDGEHEMVAGMPESFNVLVKEIRSLAINMELE Xylella_fastidiosa SIKVPFLLAIQVDSYRALHAALKSVFPIVSSGNALEYVGYKLGMFDERECRQRGMSYGAPLRVTVRLVIKEQEVYLGEIPLMTENGTFIVNGTERVIVSQLHRSPGVFFARIIPCRGSWLDFEFDPALFTRIDRRRLPVSILLRALLIILSHDVIAFFTFDRYDLSMVGRMKFNRRVGDILDVIKGLCEIRGVDDIDHLGNRRVRSVGEMAENVFRVGLVRVERAVKERLSMAEEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHLSHYGCLCTIETPEGPNIGLINSLAVFARTNQYGFLETPYRKVVGRVTDEVEYLSAIEENYVIAQATLTNGQTESFVPCRQGESLLKPPSYVHYMDVSPMQTVSVAAALVPFLEHDDANRALMGANMQRQAVPTLRAQKPLVGTGIERTVARDSVTVNARRGGVIDQVDAGRIVVKYGLIKYTRSNQNTCINQRPLVNVGDIVTSGDVLADGPSTDIGELALGQNMLIAFMPWNGYNFEDSILLSERVVEEDRYTTIHIEELTCIARDTKLGSEADIPNVSEQALNRLDESGVVYIGAEVRAGGKVTPKGESQLTPEEKLLRAIFGEKASDVKDSSLRVPPGMDGTVIDVQVFTRAPGVLMVKVFLAVKRCIQPGDKMAGRHGNKGVVSNVVPVEDMPFMEDGTPVDIVLNPLGVPSRMNIGQILEHLGWAAKVPMASPVFDGASEQEIKRMLDLQTQLYDGHTGEPFDRKTTVGYMHYLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVQGRNQMYKNIVDGDHQMVAGMPESFNVLVKEIRSLAINIELE Yersinia_pestis QVDIPYLLSIQLDSFQKLEAAFRSVFPIQSSGNELQYVSYRLGVFDVKECQIRGVTYSAPLRVKLRLVIKEQEVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVFFARIIPYRGSWLDFEFDPNLFVRIDRRRLPATIILRALIAVVAKDYVAFFSEDRYDLSAVGRMKFNRSLLDITEVMKKLIDIRGVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLSLGDDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRRVRGVVTDEINYLSAIEEGFVIAQASNLEGRLEDLVTCRKGESSLFSREQVDYMDVSTQQIVSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSVTSVAKRGGTVQYVDASRIVIKYNLTKYTRSNQNTCINQMPCVNLGEPIERGDVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRDTKLGPEADIPNVGEAALSKLDESGIVYIGAEVTGGGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRAPGVLIVKVYLAVKRQIQPGDKMAGRHGNKGVISKINPIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILEHLGMAAKMPIATPVFDGATEKEIKELLQLQITLFDGRTGEQFERQVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGDHRMEPGMPESFNVLLKEIRSLGINIELE ; END; BEGIN TREES; TITLE Tb7584; LINK TAXA = Taxa1; TRANSLATE 1 Spodoptera_exigua, 2 Thalassiosira_pseudonana, 3 Giardia_lamblia, 4 Entamoeba_histolytica, 5 Euglena_gracilis, 6 Trypanosoma_cruzi, 7 Botryocladia_uvarioides, 8 Gelidium_canariensis, 9 Porphyra_yezoensis, 10 Guillardia_theta, 11 Chlorella_kessleri, 12 Chlamydomonas_reinhardtii, 13 Triticum_aestivum, 14 Blastocystis_hominis, 15 Trichomonas_tenax, 16 Stylonychia_mytilus, 17 Tetrahymena_pyriformis, 18 Stentor_coeruleus, 19 Plasmodium_yoelii, 20 Cryptosporidium_parvum, 21 Cryptococcus_neoformans, 22 Saccharomyces_cerevisiae, 23 Neurospora_crassa, 24 Schizosaccharomyces_pombe, 25 Monosiga_brevicollis, 26 Anopheles_gambiae, 27 Caenorhabditis_elegans, 28 Gallus_gallus, 29 Dictyostelium_discoideum, 30 Mastigamoeba_balamuthi; TREE EF2_mbpostcons = [&R] (30,((29,(((25,((26,1),(28,27))),(21,(23,(24,22)))),(((6,5),((10,(9,(8,7))),(13,(12,11)))),(((18,(17,16)),(20,19)),((14,2),(15,3)))))),4)); END; BEGIN TREES; TITLE Tb7583; LINK TAXA = Taxa3; TRANSLATE 1 Yersinia_pestis, 2 Xylella_fastidiosa, 3 Wolbachia_sp, 4 Vibrio_parahaemolyticus, 5 Thermotoga_maritima, 6 Thermoanaerobacter_tengcongensis, 7 Streptomyces_avermitilis, 8 Streptococcus_mutans, 9 Rhodobacter_sphaeroides, 10 Ralstonia_metallidurans, 11 Pseudomonas_fluorescens, 12 Prochlorococcus_marinus, 13 Nostoc_sp, 14 Neisseria_meningitidis, 15 Mycobacterium_leprae, 16 Listeria_innocua, 17 Lactococcus_lactis, 18 Helicobacter_pylori, 19 Fusobacterium_nucleatum, 20 Desulfitobacterium_hafniense, 21 Coxiella_burnetii, 22 Corynebacterium_diphtheriae, 23 Clostridium_perfringens, 24 Clostridium_acetobutylicum, 25 Chlamydophila_pneumoniae, 26 Chlamydia_muridarum, 27 Burkholderia_fungorum, 28 Buchnera_aphidicola, 29 Bifidobacterium_longum, 30 Azotobacter_vinelandii; TREE PGK_mbpostcons = [&R] (30,((((2,((((20,((12,13),(((24,23),(((17,8),(16,19)),5)),(((7,(29,(15,22))),(25,26)),6)))),(9,3)),18),21)),((27,10),14)),((1,28),4)),11)); END; BEGIN TREES; TITLE Tb7585; LINK TAXA = Taxa5; TRANSLATE 1 Synechocystis_sp, 2 Thermosynechococcus_elongatus, 3 Gloeobacter_violaceus, 4 Bifidobacterium_longum, 5 Thermobifida_fusca, 6 Propionibacterium_acnes, 7 Desulfovibrio_desulfuricans, 8 Thermus_thermophilus, 9 Chloroflexus_aurantiacus, 10 Rhodothermus_marinus, 11 Clostridium_perfringens, 12 Campylobacter_jejuni, 13 Helicobacter_hepaticus, 14 Buchnera_aphidicola, 15 Borrelia_burgdorfer, 16 Leptospira_interrogans, 17 Chlamydophila_pneumoniae, 18 Parachlamydia_sp, 19 Chlorobium_tepidum, 20 Porphyromonas_gingivalis, 21 Gemmata_obscuriglobus, 22 Pirellula_sp, 23 Escherichia_coli, 24 Microbulbifer_degradans, 25 Burkholderia_cepaciar, 26 Chromobacterium_violaceum, 27 Magnetococcus_sp, 28 Bdellovibrio_bacteriovorus, 29 Agrobacterium_tumefaciens, 30 Rhodobacter_capsulatus, 31 Magnetospirillum_magnetotacticum, 32 Aquifex_aeolicus, 33 Thermotoga_maritima, 34 Thermoanaerobacter_tengcongensis, 35 Heliobacillus_mobilis, 36 Geobacter_sulfurreducens, 37 Bacillus_subtilis, 38 Exiguobacterium_sp, 39 Pediococcus_pentosaceus, 40 Streptococcus_mutans; TREE DLIG_mbpostcons = [&R] (40,(((11,(12,13)),((38,37),(35,((((27,((31,(30,29)),((26,25),((23,14),24)))),(36,(7,28))),(10,((5,(6,4)),9))),((((20,(16,15)),((22,21),(19,(17,18)))),(3,(1,2))),(33,((32,8),34))))))),39)); END; BEGIN TREES; TITLE Tb7581; LINK TAXA = Taxa2; TRANSLATE 1 Thermobifida_fusca, 2 Bifidobacterium_longum, 3 Rubrobacter_xylanophilus, 4 Bacteroides_thetaiotaomicron, 5 Chlorobium_tepidum, 6 Bdellovibrio_bacteriovorus, 7 Parachlamydia_sp, 8 Chlamydophila_caviae, 9 Pirellula_sp, 10 Helicobacter_hepaticus, 11 Campylobacter_jejuni, 12 Chromobacterium_violaceum, 13 Burkholderia_fungorum, 14 Escherichia_coli, 15 Coxiella_burnetii, 16 Fusobacterium_nucleatum, 17 Treponema_denticola, 18 Lactococcus_lactis, 19 Bacillus_subtilis, 20 Thermoanaerobacter_tengcongensis, 21 Clostridium_botulinum, 22 Leptospira_interrogans, 23 Sinorhizobium_meliloti, 24 Zymomonas_mobilis, 25 Geobacter_sulfurreducens, 26 Magnetococcus_sp, 27 Thermotoga_maritima, 28 Aquifex_aeolicus, 29 Gloeobacter_violaceus, 30 Synechocystis_sp; TREE UVR_mbpostcons = [&R] (30,((9,((22,(17,(25,((24,23),(26,((13,12),(14,15))))))),(((11,10),((((4,5),6),(8,7)),(28,27))),(((20,21),(3,(2,1))),(16,(18,19)))))),29)); END; BEGIN TREES; TITLE Tb7582; LINK TAXA = Taxa4; TRANSLATE 1 Wigglesworthia_brevipalpis, 2 Buchnera_aphidicola, 3 Buchnera_sp, 4 Yersinia_pestis, 5 Escherichia_coli, 6 Geobacter_metallireducens, 7 Desulfovibrio_desulfuricans, 8 Campylobacter_jejuni, 9 Helicobacter_pylori, 10 Magnetococcus_sp, 11 Rickettsia_conorii, 12 Anaplasma_marginale, 13 Ehrlichia_chaffeensis, 14 Rhodobacter_capsulatus, 15 Novosphingobium_aromaticivorans, 16 Caulobacter_crescentus, 17 Rhodopseudomonas_palustris, 18 Bartonella_quintana, 19 Brucella_melitensis, 20 Mesorhizobium_loti, 21 Sinorhizobium_meliloti, 22 Agrobacterium_tumefaciens, 23 Nitrosomonas_europaea, 24 Ralstonia_metallidurans, 25 Neisseria_meningitidis, 26 Xanthomonas_axonopodis, 27 Xylella_fastidiosa, 28 Legionella_pneumophila, 29 Coxiella_burnetii, 30 Azotobacter_vinelandii, 31 Pseudomonas_aeruginosa, 32 Microbulbifer_degradans, 33 Shewanella_oneidensis, 34 Shewanella_violacea, 35 Vibrio_cholerae, 36 Vibrio_parahaemolyticus, 37 Haemophilus_somnus, 38 Pasteurella_multocida, 39 Buchnera_aphidicolaXAA; TREE POL_mbpostcons = [&R] (9,((((((27,26),(((32,(31,30)),((34,33),((5,(4,((3,2),(1,39)))),((38,37),(36,35))))),(29,28))),(23,(25,24))),(10,((11,(13,12)),(15,(16,(14,(17,(18,((22,21),(20,19)))))))))),(7,6)),8)); END;