#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 18, 2024; 13:32 GMT TreeBASE (cc) 1994-2008 Study reference: Verbruggen H., Clerck O., Schils T., Kooistra W., & Coppejans E. 2005. Evolution and phylogeography of Halimeda section Halimeda. Molecular Phylogenetics and Evolution, 37: 789-803. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S1472] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=60; TAXLABELS Halimeda_cuneata_1_H0195_1_AF407256 Halimeda_cuneata_1_KZN2K4_21_AY823840 Halimeda_cuneata_1_KZN2K4_41_AY823842 Halimeda_cuneata_2_KZN2K4_20_AY823843 Halimeda_cuneata_2_KZNb2352_AY823841 Halimeda_cuneata_3_H0210_AY823844 Halimeda_cuneata_3_WA182_AY823838 Halimeda_cuneata_4_SOC212b_AY823845 Halimeda_cuneata_4_SOC252_AF525595 Halimeda_cuneata_4_SOC348_AF525596 Halimeda_cuneata_7_H0500_AF823837 Halimeda_cuneata_7_H0501_AY823850 Halimeda_cuneata_7_H0502_AY823851 Halimeda_cuneata_f_digitata_Philippines_HV605_AY823846 Halimeda_cuneata_f_digitata_Philippines_HV732_AY823847 Halimeda_cuneata_f_undulata_H0122_AF407252 Halimeda_cuneata_f_undulata_HV586_AY823848 Halimeda_cuneata_f_undulata_HV683_AY823849 Halimeda_discoidea_1_99_029_AF525605 Halimeda_discoidea_1_AF525598 Halimeda_discoidea_1_AF525600 Halimeda_discoidea_1_AF525601 Halimeda_discoidea_1_H0041_AF525604 Halimeda_discoidea_1_H0117_AF525597 Halimeda_discoidea_1_H0153_AF525602 Halimeda_discoidea_1_H0191_AF525599 Halimeda_discoidea_1_HEC12634b_AF525603 Halimeda_discoidea_1_MAS153_AY823852 Halimeda_discoidea_1_MAS356_AY823853 Halimeda_discoidea_1_OMII118_AF823839 Halimeda_discoidea_1_SOC212a_AY823854 Halimeda_discoidea_1_SOC299_AF407254 Halimeda_discoidea_2_H0144_AF525585 Halimeda_discoidea_2_H0207_AF407249 Halimeda_discoidea_2_H0209_AF525587 Halimeda_discoidea_2_H0410_AF525586 Halimeda_discoidea_2_HV495_AY823855 Halimeda_gracilis Halimeda_hummii_H0251_AF525583 Halimeda_lacunalis_H0118_AF407246 Halimeda_lacunalis_H0121_AF525579 Halimeda_lacunalis_H0212_AF525580 Halimeda_lacunalis_HV306_1_AY786519 Halimeda_lacunalis_HV308_1_AY786520 Halimeda_macrophysa Halimeda_magnidisca Halimeda_taenicola_H0037_AF407255 Halimeda_taenicola_HV285_1_AY786521 Halimeda_taenicola_HV285_2_AY786522 Halimeda_taenicola_HV306_3_AY786523 Halimeda_tuna_1_H0231_AF407248 Halimeda_tuna_1_Jamaica_HV447_AY823857 Halimeda_tuna_1_Jamaica_HV458_AY823858 Halimeda_tuna_1_Jamaica_HV459_AY823859 Halimeda_tuna_1_Mexico_H0231_AF407248 Halimeda_tuna_1_Panama_H0074_AF525589 Halimeda_tuna_2_H0113_AF407250 Halimeda_tuna_2_Malta_H0202_AF525588 Halimeda_tuna_2_Slovenia_H0493_AY823856 Halimeda_tuna_2_Spain_HV319__AY786524 ; END; BEGIN TAXA; TITLE Taxa2; DIMENSIONS NTAX=60; TAXLABELS Halimeda_cuneata_1_KZN2K4_21_AY823860 Halimeda_cuneata_1_KZN2K4_41_AY823861 Halimeda_cuneata_1_KZNb2263_AY823862 Halimeda_cuneata_2_H0195_2_AY823863 Halimeda_cuneata_2_KZN2K4_20_AY823864 Halimeda_cuneata_2_KZNb2352_AY823865 Halimeda_cuneata_3_H0210_AY823866 Halimeda_cuneata_3_H0550_AY823867 Halimeda_cuneata_3_H0551_AY823868 Halimeda_cuneata_3_WA182_AY823869 Halimeda_cuneata_3_WA206_AY823870 Halimeda_cuneata_4_SOC212b_AY823871 Halimeda_cuneata_4_SOC252_AY823872 Halimeda_cuneata_4_SOC348_AY823873 Halimeda_cuneata_7_H0500_AY823881 Halimeda_cuneata_7_H0501_AY823882 Halimeda_cuneata_7_H0502_AY823883 Halimeda_cuneata_f_digitata_HV605_AY823874 Halimeda_cuneata_f_digitata_HV732_AY823875 Halimeda_cuneata_f_digitata_HV827_AY823876 Halimeda_cuneata_f_undulata_H0122_AY823877 Halimeda_cuneata_f_undulata_HV33_AM049983 Halimeda_cuneata_f_undulata_HV41_AM049984 Halimeda_cuneata_f_undulata_HV560_AY823878 Halimeda_cuneata_f_undulata_HV586_AY823879 Halimeda_cuneata_f_undulata_HV683_AY823880 Halimeda_discoidea_1_H0041_AY823887 Halimeda_discoidea_1_H0153_AY823888 Halimeda_discoidea_1_HV58_AM049985 Halimeda_discoidea_1_MAS153_AY823884 Halimeda_discoidea_1_MAS356_AY823885 Halimeda_discoidea_1_OMII118_AY823886 Halimeda_discoidea_1_SOC212a_AY823889 Halimeda_discoidea_1_SOC299_AY823890 Halimeda_discoidea_2_H0144_AY823891 Halimeda_discoidea_2_H0207_AY823892 Halimeda_discoidea_2_H0209_AY823893 Halimeda_discoidea_2_HV495_AY823894 Halimeda_discoidea_3_HV396_AY823895 Halimeda_discoidea_3_HV431_AY823896 Halimeda_gracilis Halimeda_hummii Halimeda_lacunalis_H0118_AY823897 Halimeda_lacunalis_H0121_AY823898 Halimeda_lacunalis_HV306_1_AY823899 Halimeda_lacunalis_HV308_1_AY823900 Halimeda_macrophysa_H0271_AM049987 Halimeda_magnidisca_HEC12910_AY823901 Halimeda_magnidisca_SOC385_AY823902 Halimeda_taenicola_H0037_AY823903 Halimeda_taenicola_HV285_1_AY823904 Halimeda_taenicola_HV285_2_AY823905 Halimeda_taenicola_HV306_3_AY823906 Halimeda_tuna_1_H0074_AY823909 Halimeda_tuna_1_H0231_AY823910 Halimeda_tuna_1_HV447_AY823911 Halimeda_tuna_1_HV458_AY823912 Halimeda_tuna_1_HV459_AY823913 Halimeda_tuna_2_H0113_AY823907 Halimeda_tuna_2_H0493_AY823908 ; END; BEGIN TAXA; TITLE Taxa3; DIMENSIONS NTAX=18; TAXLABELS Halimeda_cuneata_1_AY826353_AY826369_AY823860 Halimeda_cuneata_2_AY826354_AY826370_AY823865 Halimeda_cuneata_3_AY826355_AY826371_AY823869 Halimeda_cuneata_4_AY826356_AY826372_AY823872 Halimeda_cuneata_7_AY826358_AY826374_AY823881 Halimeda_cuneata_undulata Halimeda_discoidea_1_AY826359_AY826375_AY823886 Halimeda_discoidea_1_AY826360_AY826376_AY823890 Halimeda_discoidea_2_AY826361_AY826377_AY823892 Halimeda_discoidea_3_AY826362_AY826378_AY823895 Halimeda_gracilis Halimeda_hummii Halimeda_lacunalis Halimeda_macrophysa Halimeda_magnidisca Halimeda_taenicola Halimeda_tuna_1_AY826367_AY826383_AY823910 Halimeda_tuna_2_AY826366_AY826382_AY823907 ; END; BEGIN TAXA; TITLE Taxa4; DIMENSIONS NTAX=18; TAXLABELS Halimeda_cuneata_1_KZN2K4_21_AY823840 Halimeda_cuneata_2_KZNb2352_AY823841 Halimeda_cuneata_3_WA182_AY823838 Halimeda_cuneata_4_SOC252_AF525595 Halimeda_cuneata_7_H0500_AF823837 Halimeda_cuneata_undulata Halimeda_discoidea_1_OMII118_AF823839 Halimeda_discoidea_1_SOC299_AF407254 Halimeda_discoidea_2_H0207_AF407249 Halimeda_discoidea_3_HV396 Halimeda_gracilis Halimeda_hummii Halimeda_lacunalis Halimeda_macrophysa Halimeda_magnidisca Halimeda_taenicola Halimeda_tuna_1_H0231_AF407248 Halimeda_tuna_2_H0113_AF407250 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M1039] TITLE plastid_concatenated; LINK TAXA = Taxa3; DIMENSIONS NCHAR=2250; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=N GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 1510 1520 1530 1540 1550 1560 1570 1580 1590 1600 1610 1620 1630 1640 1650 1660 1670 1680 1690 1700 1710 1720 1730 1740 1750 1760 1770 1780 1790 1800 1810 1820 1830 1840 1850 1860 1870 1880 1890 1900 1910 1920 1930 1940 1950 1960 1970 1980 1990 2000 2010 2020 2030 2040 2050 2060 2070 2080 2090 2100 2110 2120 2130 2140 2150 2160 2170 2180 2190 2200 2210 2220 2230 2240 2250 2260 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Halimeda_cuneata_1_AY826353_AY826369_AY823860 NNNNNNNTGATAACTGGAGCGGCTCAAATGGATGGAGCCATTTTAGTAGTCTCGGGTGCTGATGGGCCAATGCCTCAAACAAAAGAACATATCTTATTAGCTCAACAAGTTGGGGTACCTGCAATAGTTGTTTTTCTGAATAAAATAGATCAGGTTGATGATCAAGATTTATTAGAACTTGTGGAGCTTGAAATTCGAGACACTTTAGATCGATATGATTTTCCAGGAGATGAGATTCCAATAATAAGTGGTTCAGCATTAGCAGCAGTGGAAGCATTAACAACAAATCCAATGATTCAAAGAGGTGAAAATGAATGGGTTGATAACATCTATAAATTAATGGATATTATTGATGATGAAATACCTCTGCCACCTCGAAATACAGAGAAGGACTTTTTGATGGCAGTTGAAAATGTTGTTTCTATTACAGGTCGTGGAACAGTGGCTACAGGTCGAGTTGAACGAGGTCAAATAAAAGTTGGTCAAACTATTGAAATTGTAGGCCTTAAAGAAACAAAAGAAACAACTGTTATTGGACTTGAAATGTTTCAAAAAACATTAGAAGAAAGTGTCGCTGGTGATAATGTTGGTGTTTTATTGCGTGGTATTCAAAAACATCAAATTGAACGTGGTATGGTTTTAGCAAAACCAGGTTCAATTAAACCTCATACGCGTTTTAAAGCTCAAGTTTATATTTTAAAAAAAGATGAAGGTGGACGTCATACTTCTTTTGTTGCAGGTTATAGACCACAATTTTATGTTCGAACAACAGATGTTACTGGTAAAATAGATTCTTTTCAAGGCGATGACGATAGTGTGATTCGTATGGTAATGCCAGGAGATCGAGTNNNNNNNNNNGGTTTATCTTTACAAAGTTTTGATGGCAGGGGAAATTATAATTTTGGTCTTGATGAACAACTCATGTTTCCAGAAATTCATTATGACCAAATACAACAAATTCGTGGAATGGATATTACAATTGTAACAACTGCTCAAACGGATCAAGAAGGATTCGCTTTATTACAAGAATTTGGTCTGCCTTTTTATGAA---------TGAATGAAT------GAT---TCTCTCTCTGATCTTTTTACACGTATCCGAAATGCACAT---------TTAGTAGGT---CATCTGACAGTTCCAGTTCCTTTGTCTTCTACTAACAAAAGCATTTTGGATATTTTAGTACGTCATGGTTTTATTCACCATTTTGAT---CAA---------ATTCAGAAC---------CGACAATTTTTAGTTACTTTCAAATCCAAAGCAGTTATTCGA------GAATTACAACGACTCAGTCGACCAGGCTGCCGACTTTATGTTTCAGCACAAAAAATTCCTCAAATTCGTGGACAATTGGGAATTCTCTTTTTATCTACGTCCAAAGGAATTCTTAGCGATCGTGAAGCTCGATATTTGAAGCTTGGAGGTGAAATTCT{CT}GGATAC{AC}NTTCATAGATTT{CT}TTC{AC}C{AC}A---AAAAAAAAA---TATACA------------------------AAAGGTGTACAACTACCTGGGGTCGTTTATCAATGTTTATCAAATGGTATGTTTGGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAGCACTGATAAA------AAATTCAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCCTTAGGGTTTCGAGTAGGTATCACCCAACCTCATTTATCACACTGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATCATTTTGTAAGAACTGTATTATCAGAAAAATATACTAGAGCACGATTTGAAAAAATTCAAATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATATTCTGATTGGGAAAAAAGGT------------------GAAAATTTAAAAATTTTTCAAAAACAAATTAAAACATTTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATATCGGTGTAAAACGAGTGCATCATCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAGACGCATTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTGAAAAGAAAAAAACAATCAACT------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_cuneata_2_AY826354_AY826370_AY823865 AAAAACATGATAACTGGAGCGGCTCANATGGATGGAGCAATTTTAGTAGTTTCTGGTGCTGATGGGCCAATGCCTCAAACAAAAGAACATATATTATTAGCCCAACAAGTTGGTGTACCAGCAATAGTAGTTTTTCTGAATAAAATTGATCAGGTTGATGATCACGATTTATTAGAACTTGTGGAACTAGAAATTCGAGATACTTTAGATAAATATGATTTTCCAGGAGATGATATTCCAATAATTTGTGGTTCAGCATTAGCAGCAGTGGAAGCATTAACAGAAAATCCGATGATTCAAAGAGGTGAAAATGAATGGGTTGATAATATCTATCAATTAATGGATATTATTGATGATGAAATCCCTCTGCCACTTCGAAATACAGAAAAAGATTTTCTGATGGCAATTGAAAATGTTGTATCGATAACAGGTCGGGGAACAGTTGCTACAGGTCGAGTTGAAAGAGGTAAAATAAAAGTAGGACAAACTGTTGAACTTGTAGGCCTGAACAAAACACAACTATTAACTGTTACTGGACTTGAAATGTTTCAAAAAACATTAGACGAAAGTGTTGCTGGTGATAATGTTGGTATTTTATTACGTGGTATTCAAAAACATCTAGTTGAACGTGGTATGGTGTTGGCAAAACCAGGTTCAATTACACCGCATACCCGTTTTAAAGCGCAAGTTTATATTTTAAAAAAAGATGAAGGTGGACGTCATACTTCTTTTGTTGCAGGTTATAGACCACAATTTTATGTTCGAACAACAGATGTTACTGGTAAAATAGATTCTTTTCGAGGAGATGATGATAGTAAACTTCGTGTGGTAATGCCAGGAGATCGAGTAAAAATTGTTGGTTTATCTTTACAAAATTTTGATGGCAGAGGCAATTTGAATTTTGGTCTTGATGAACAACTCATGTTTCCAGAAATTTATTATGATCAAATACAACAAATACGAGGAATGAATATTACAATCGTAACAACTGCTCAAACGGATCAAGAAGGATTCGCTTTATTATACAAATTTGGTATGCCTTTTTATGAA---------TGAATGAAT------GATGATTCTCTCTCTGATCTTTTTACACGTATCCGAAATGCACAT---------TTAGTAGGT---CATCCGACAGTTCAAGTTCCTTTCTCCTCTACTAACAAAAGCATTTTGGATATTTTAGTACGTCATGGTTTTATTCAACATTTGGAA------------------CAGAAT---------CAACAATTTTTAGTTACCTTCAAATCCAAT------TTTCGA------GAATTACAACGAGTCAGTCGACCAGGCTGTCGAATTTATGTTTCAGCACAAAACATTCCT------CGTGGG------GGAATTCTATTTTTATCTACGTCCAAAGGCATTATTAGTGATCGTGAAGCTCGATTTTTGAACCTTGGAGGTGAAATTCTTGGCTATATTTC{AC}TAAATGAAA---------AAAAAAAAA---TATACT------------------------AAAGGTGTACAAATGCCCGGCACCGTTTCTCAATGTTTATCAAATGGTATGTTTGGTGAGTTTTCACCTACACGTTATTTTCGAGGTCATAAAAAAACTGATAAA------AAATTTAAACGT---------------CGTCGT------------TAA------ATGGGACAAAAAGTTCATCCTTTGGGATTTCGATTAGGTATCACACAACCTTATTTATCTAACTGGTATGCTTCCAAAAAAGATTATTCAAAATATGTCTTGGAAGATCATTTAATCAGAACTCTATTATTCAAAAAATATAATCGAGCCAAATTTGACAAAATTACAATTTTTCGTAATATAGAAGATCATGTTGAAATTTTTATATATGCTCAAAAACCTGAAATTCTTCTTGGGACAACAGGT------------------------GCACGACAGTTACAAAAACAAATAAAAACATCGATTTTTCAACATCGAAAAAGG------AACTCAAGATTGAAAGTTATATTATCTATATTTTGCTGTAAAATTAATGCATCATCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAGACGCATTCCATATAAAGTTGTTTTAACTTTATTAAAAAAATATTTAAAAAGAAACAAACCT------------------------------------TTAGGAATGAAAGTGAAAATTTCTGGC Halimeda_cuneata_3_AY826355_AY826371_AY823869 NNNNNNNTGATTACTGGAGCGGCTCAAATGGATGGCGCAATTTTAGTTGTTTCTGGTGCTGATGGTCCAATGCCTCAAACAAAAGAACATATATTATTAGCCCAACAAGTTGGTGTGCCAGCGATCGTTGTTTTTCTGAATAAAATCGATCAGGTTGATGATCAAGATTTATTAGAACTTGTGGAACTTGAAATTCGAGAAACTTTAGACCGATATAACTTTCCAGGAGATGAGATTCCAATAATTAGTGGTTCCGCATTAGCAGCAGTAGAAGCATTAACAACAAATCCACTGATTCAAAGAGGTGAAAATGAGTGGGTTGATAATATCTATAAATTAATGGATATGATTGATGATGAAATACCTCTGCCACCTCGAAATACAGAGAAGGATTTTCTGATGGCTATTGAAAATGTTGTTTCGATAACAGGTCGGGGAACAGTTGCTACAGGTCGAGTTGAAAGAGGTCAAATAAAAGTAGGGCAAACTGTTGAAATTGTAGGCCTGAAAGAAACAAAAGAAACAACTGTGATTGGACTTGAAATGTTTCAAAAAACATTAGAAGAAAGTGTTGCTGGTGATAATGTTGGTGTTTTATTGCGTGGTATCCAAAAACATCAAATTGAACGTGGTATGGTTTTGGCAAAACCAGGTTCAATTACACCTCATACTCGTTTTAAAGCTCAAGTTTATATTTTAAAAAAAGATGAAGGTGGACGTCATACTTCTTTTGTTGCAGGTTATAGACCACAATTTTATGTTCGAACAACAGATGTTACTGGTAAAATTGATTCTTTTCAAGGCGATGATGATAGTGTGATTCGTATGGTAATGCCAGGAGATCGAGTAAAAATTGTGGGTTTATCTTTACAAAGTTTTGATGGCAGGGGAAATTACAATTTTGGTCTTGATGAACAACTTATGTTTCCAGAAATTCATTATGACCACATACAACAAATCCGTGGAATGGATATTACAATTGTAACAACTGCTCAAACGGATCAAGAAGGATTAACTTTATTACAAAAATTTGGTATGCCTTTTTATGAA---------TGAATGAAT------GAT---TCTCTCTCTGATCTTTTTACACGTATCCGAAACGCACAT---------TTAGTAGGG---CATCTGACAGTTCCAGTTCCCTCTACTAACAAAAACATTAGCATTTTGGATATTTTAGTACGTCATGGTTTTATTCAACATTTT---GCT---CCA------ATTCAAAAT---------CGACAATTTTTAGTTACTCTTAAACCAAAT------ATTCGA------GAATTACAACGACTCAGTCGACCAGGCTGCCGACTTTATGTGTCAGCACACAACATCCCTCAAATTCGTGTG------GGCATTCTCTTTTTATCTACGTCCAAAGGGATTGTGAGCGATCGTGAAGCTCGATATTTGAAGCTTGGCGGTGAAATTCTCGGATATATTTCATAAATTCCTTCACCA---AAAAAAAAA---TATACC------------------------AAAGGTGTACAACTTCCTGGGGTCGTTTATCAATGTTTATCAAATGGTATGTTTGGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCCTTGGGGTTTCGATTAGGGATCACACAACCTCATTTATCAAACTGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATAATTTTGTAAGAACTCTATTGTCAGAAAAATATAATAGAGCACGATTTGAAAAAATTCACATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATATTTTGATTAAAGGTGAA---------------------------------AATTTACAAAAACAAATTAAAACATTTCTTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCAGTGTAAAACCAGTGCCTCAGCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAACGCATTCCATATAAAGTTGTTTTGAATTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCCACT------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_cuneata_4_AY826356_AY826372_AY823872 NNNNNNNNNNNTACTGGAGCGGCTCAAATGGATGGTGCAATTTTAGTAGTTTCGGGTGCTGATGGGCCAATGCCACAAACAAAAGAGCATATATTATTGGCCCAACAAGTTGGNGTGCCAGCTATAGTTGTTTTTCTGAATAAAATCGATCAAGTTGATGATCAAGATTTATTAGAGCTGGTGGAACTTGAAATTAGAGAAACGTTAGATCGCTATGACTTTCCAGGAGCTGAGATCCCAGTTATTAGTGGTTCAGCATTAGCAGCAGTGGAGGCATTAACAACAAATCCAATGATTCAAAGAGGTGAAAATGAATGGGTTGATAATATTTATAAATTAATGGATATGATTGATGATGAAATTCCTTTGCCACCTCGAAATACAGAGAAGGATTTTCTGATGGCAGTTGAAAATGTTGTTTCGATAACAGGTCGAGGAACAGTTGCGACAGGTCGAGTTGAAAGAGGTCAAATAAAAGTAGGACAAACTGTTGAAATTGTAGGCCTTAAAGAAACAAAAGAAACAACTGTGATTGGACTTGAAATGTTTCAAAAAACATTAGAAGAAAGTGTTGCTGGTGATAATGTTGGTGTTTTATTGCGTGGTATCCAAAAAAATGAAATTGAACGTGGTATGGTGTTAGCAAAACCAGGTTCAATTACACCTCATACTCGTTTTAAAGCTCAAGTGTATATTTTAAAAAAAGATGAAGGTGGGCGTCATACTTCTTTTGTTGCCGGTTATAGACCACAATTTTATGTTCGAACAACAGATGTGACTGGTAAAATTGATTCTTTTCAAGGTGATGACGATAGTGTGATTCGTATGGGCATGCCAGGAGATCGAGTNNNNNNNNNNGGTTTATCTTTAC{AC}AAGTTTTGATGGCAGGGGAAATTACAATTTTGGTCTTGATGAACAACTCATGTTTCCAGAAATTCATTATGATCACATACAACAAATCCGCGGAATGGATATTACAATTGTAACCACTGCTCAAACCGATCAAGAAGGATTTGTTTTATTAAAAAAATTTGGTATGCCTTTTAATGTC---TGT---TAAATGTCTGTTAATGAT---TCTCTGTCTGATCTTTTTACACGTATCCGAAACGCACAT---------TCAATC---------------GTGACAGTTCCAGTGTCTGCGACTAACAAAAGCATTTTGGATATTTTAGTACGTCATGGTTTTATTCAACATTTTGAA---------------ATTCAAAAT---------CAACAATTTTTAGTTACCCTCAAATCC------ACTATTCGA------GAATTACAACGACTTAGTCGACCAGGCTGCCGACTTTATGTGTCAGCACAAAAAATCCCTCAAATTCGTGGACAATTGGGCATCCTCTTTTTATCTACGTCCAAAGGGATTCTGAGCGATCGCGAAGCTCGATATCTGAAGCTCGGTGGTGAACTGCTCGGATATATTTCATAAATGCAA---------AAAAAAAAA---TAT------------------------CCAAAAGGTGTACAATTACCGGGGGTCGGGTATCAATGTTTGTCAAATGGAATGTTTGGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCCTTGGGGTTTCGATTAGGGATCACACAACCGCATTTATCAAACTGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATAATTTTGTAAGAACTTTTTTGTCAGAAAAATATAGTAGAGCACGATTTGAAAAAATTCATATTTCTCGTAAAATAGAAGATCATCTTGAAATCGTCATCTATGCTCAAAAACCTGATATTTTGATTGGGAAAAAAGGT------------------------GTAAAAAATTTTCAAAAACAAATCAAAACATCTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCAGTGTAAACCTAGTGCATCCTCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAGCGCATTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTGAAAAGAACAAAACAATCCACT------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_cuneata_7_AY826358_AY826374_AY823881 AAAAACATGATCACCGGAGCAGCTCAAATGGATGGTGCTATTTTAGTAGTCTCGGGTGCTGATGGTCCAATGCCTCAAACAAAAGAACATATATTATTAGCTCAACAAGTTGGGGTGCCGGCAATAGTTGTTTTTCTGAATAAGATTGATCAGGTAGATGATCAAGATTTACTTGAACTGGTTGAACTAGAGATTCGAGAAACTTTAGATCGATATGATTTTCCTGGAGATGAGATTTCCATCATTAGTGGTTCAGCCTTAGCAGCAGTGGAAGCATTGACCACAAATCCACTGATTCAAAGAGGTGAGGATGAGTGGGTTGATAAAATCTATAAATTAATGGATATTATTGATGATGAAATACCATTGCCACCTCGAAATACAGAGAAAGATTTTCTGATGGCGATTGAAAATGTTGTTTCTATTACAGGCCGAGGAACAGTTGCAACAGGCCGAGTTGAAAGAGGTCAAATAAAAGTTGGTCAAACTGTTGAGATTATAGGTCTTAAAGAAACAAAAGAAACAACTGTTATTGGACTTGAAATGTTTCAAAAAACATTAGAAGAAAGTGTTGCTGGTGATAATGTTGGTGTTTTATTACGTGGTGTTCAAAAAACTGAAATTGAACGTGGTATGGTTTTAGCAAAACCTGGTTCAATTAAACCTCATACGCGTTTCAAAGCTCAAGTCTATATTTTAAAAAAAGATGAAGGTGGGCGACATACTTCTTTTGTTGCAGGTTATAGACCACAATTTTATGTTCGAACAACAGATGTAACGGGGAAAATTGACTCTTTTCAAGCAGATGACGATAGTAAAATTCGTATGGTTATGCCAGGGGATCGAGTAAAGATTATTGGGTTATCTTTACAAAGTTTCGATGGTTGGGGAAATTACAATTTTGGTCTCGATGAGCAACTTATGTTTCCCGAAATTCATTATGACAAAATACAACAAATACGCGGAATGGATATTACAATTGTCACAACAGCTCAAACGGATCAAGAAGGGTTAGCTTTATTACAAGAGTTTGGTATGCCTTTTTATGAA---------TGAATGAAT------GAT---TCTATCTCTGATCTTTTTACATGTATCCGAAATGCACAT---------TTAGTAGGT---CACAACACAGTTCGAGTTCCTTTGACGTCTACTAACAAAAGTATTTTGGACATTTTCGTCCGTCATGGTTTTCTCCAAGATTTT---CATCAA---------ATTGAGAAT---------CGACAGTTTTTAGTGACGTTAAAATCC------ACTATTCGA------GAATTACAACGACTCAGCCGCCCAGGCTGCCGACTCTATGTTTCAGCACAAAATATTCCACGTATTCGTGGACAATTAGGCATTGTTGTTCTCTCTACATCCAAAGGAATTGTGAGTGACCGCGAAGCTCGATATTTTAAACTTGGAGGTGAAATTCTCGGATATATCTTATAAATGAAAAAT---------AAAAAACAA---------------------------CCCAAGGGTGTCCAATTGCCCGGAGTCGTGTGCCAATGTTTGTCAAATGGTATGTTTGGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTCAACGAATTCAACGAAAACGCCGT---------------TAA------ATGGGACAAAAAGTACATCCATTAGGGTTTCGATTAGGTATTACTCAACCTCATTTGTCACAATGGTATGCTTCCAAAAGAGATTATTCAAAATATGTATTGGAAGATAATTTTGTAAGAACACTCTTATCAAAAAAGTATAAAAGAGCAAAATTTGAAAAAATTCACATTTCTCGTAAAATAGAAGATCACCTAGAAATTGTGATTCATGCTCAAAAACCTGATATTTTGATTGGAAAAAAAAGT------------------GAAAATTTACAAACTTTTCAACAACAAATTAAAAAAGCGATTTTTCAATATCGGCAAATTGCCTGGAACTCACAATTGAAAGTGATATTCTATATATTTCGCTGTAAAATCAACGCATCTTCT---ATTGCTGATTTTATTGTAGAACATTTAGAAAAACGCGTTCCATATAAAGTGGTGTTCGTTTTATTAAAAAAACATTTACAAAGACAAAGATACTCACCT------------------------------TTAGGAATGAAAATTCAGATTTCTGGC Halimeda_cuneata_undulata AAAAACATGATAACTGGTGCAGCTCAAATGGACGGAGCGATTTTAGTGGTTTCTGGTGCTGATGGACCAATGCCTCAAACAAAAGAACATATATTATTAGCTCAACAAGTTGGTGTGCCAGCTATAGTTGTTTTTCTGAATAAAATAGATCAGGTTGATGATAAAGATTTATTAGAACTTGTGGAACTTGAAATTAGAGACACTTTAGACCGATATGATTTTCCAGGAGATGAGATACCAGTAATTAGTGGTTCAGCATTAGCAGCAGTAGAAGCATTAACAACAAATCCAATGATTCAAAGAGGTGAAAATGAATGGGTTGATAATATCTATAAATTAATGGATATTATTGATGATGAAATACCTCTACCACTTCGAAATACAGAGAAGGATTTTCTGATGGCAGTTGAAAATGTTGTTTCAATAACAGGTCGAGGAACAGTTGCTACAGGTCGAGTTGAAAGAGGTCAAATAAAAGTAGGACAAACTGTTGAAATTATAGGCCTTAAAGAAACAAAAGAAACAACTGTTATTGGACTTGAAATGTTTCAAAAAACATTAGAAGAAAGTGTTGCTGGTGATAATGTTGGTGTTTTATTACGTGGTATTCAAAAACATCAAATTGAACGTGGTATGGTTTTGGCAAAACCAGGTTCAATTACACCTCATACCCGTTTTAAAGCTCAAGTCTATATTTTAAAAAAAGATGAAGGTGGACGTCATACTTCTTTTGTTGCAGGTTATAGACCACAATTTTATGTTCGAACAACAGATGTTACTGGTAAAATTGATTCTTTTCAAGGAGACGATGATAGTGTGATTCGTATGGTAATGCCAGGAGATCGAGTAAAAATTGTNGGTCTGTCTTTACAAAGTTTTGATGGCAAGGGAAATTACAATTTTGGTCTTGATGAACAACTCATGTTTCCAGAAATTCATTATGATCAAATACAACAAATCCGTGGAATGGATATTACAATTGTAACAACTGCTCAAACGGATCAAGAAGGATTAGCTTTATTACAACAATTTGGTATGCCTTTTTATGAA---------TGAATGAAT------GATGATTCTCTTTCTGATCTTTTTACACGTATTCGAAATGCACAT---------TTAGTAGGT---CATCTGACAGTTCTAGTTCCTTTTTCTTCTACTAATAAAAGTATTCTAGATATTTTAGTACGTCATGGTTTTATTCAAAATTTTGAT---CAA---------ATTCAGAAT---------CAACAGTTTTTAGTTACGTTCAAATCAAAATCTGTTATTCGA------GAATTACAACGACTCAGTCGACCAGGCTGTCGAATTTATGTTTCAGCACAAAACATTCCTCAAATTCGTGGACAATTGGGAATTCTATTCTTATCTACGTCCAAAGGAATTCTTAGCGATCGTGAAGCTCGATATTTGAAGCTTGGAGGTGAAATTCTTGGATATATTTCATAGATTCCA------AAAAAAAAAAAACAT---------------------------GTCAAAGGTGTACAACTACCTGGGGTCGTTTATCAATGTTTATCCAATGGTATGTTTGGTGAGTTTGCACCTACACGTTCTTTTCGAGGTCATAAAAATACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCTTTGGGGTTTCGATTAGGTATTACACAACCTCATTTATCACAATGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATCATTTTGTAAGAACTCTATTGTCACAAAAATATAATAGAGCACGATTTGAAAAAATTCATATTTCCCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATCTTCTGATCGGCAAAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAAAATTTATTTTTCAATATCGACAAATTGAATGGAATTCAAGACTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAACGAGTTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAATT------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_discoidea_1_AY826359_AY826375_AY823886 NNNNNNNTGATAACTGGAGCGGCTCAAATGGATGGAGCAATTTTAGTAGTTTCTGGTGCCGATGGACCAATGCCTCAAACAAAAGAACATATATTATTAGCTCAACAAGTTGGAGTGCCTGCAATAGTTGTTTTTCTTAATAAAATAGATCAGGTTGATGATAAAGAATTATTAGAACTTGTAGAGCTTGAAATTCGAGAAACTTTAGATAAATATGATTTTCCAGGAGATTCGATTCCAATAATAAGTGGTTCAGCATTAGCAGCAGTGGAAGCATTAACAACAAATCCAATGATTCAAAGAGGTGAAAATGAATGGGTTGATAACATCTATAAATTAATGGATATGATTGATGATGAAATACCTCTGCCACCTCGAAATACAGAGAAAGATTTTTTAATGGCAATTGAAAATGTTGTTTCGATTACAGGTCGTGGAACAGTTGCTACAGGTCGAGTTGAAAGAGGTCAAATAAAAGTTGGTCAAACTGTTGAAATTGTAGGTCTTAAAGAAACAAAAGAAACAACTGTTATTGGACTGGAAATGTTTCAAAAAACATTAGAAGAAAGTGTCGCTGGTGATAATGTTGGTGTTTTATTGCGTGGTATTCAAAAAAATGAAATTGAACGTGGTATGGTTTTAGCAAAACCAGGTTCGATTACACCTCATACTCGTTTTAAAGCTCAAGTTTATATTTTAAAAAAAGATGAAGGTGGACGTCATACTTCTTTTGTTGCAGGTTATAGACCACAATTTTATGTTCGAACAACAGATGTTACTGGTAAAATTGATTCTTTTCAAGGTGATGACGATAGTGTGATTCGTATGGTAATGCCAGGAGATCGAGTAAAANNNNNNGGTTTATCTTTAAGAAGTTTTGATGGCAGAGGAAATTTCAATTTTGGTCTTGACGAACAACTTATGTTTCCAGAAATTCATTATGACCAAATACAACAAATCCGTGGAATGGATATTACAATTGTAACAACTGCTCAAACGGATCAAGAAGGATTAGCTTTATTACAACAATTTGGTATGCCTTTTTATGAA---------TGAATGAAT------GAT---TCTCTCTCTGATCTTTTTACACGTATCCGCAATGCACAT---------TTAGTAGGT---CATCGGACAGTTACAGTTCCTTTGTCCTCTACTAACAAAAGCATTTTGGAAATTTTAGTACGTCATGGTTTTATTCAACAGTTTGAT---CAA---------ATTCAGAAT---------CGACAATTTTTAGTTACCTTTAAATCAAAATCTGTTATTCGA------GAATTACAACGACTCAGTCGACCAGGCTGCCGACTTTATGTTTCAGCACAAAATATTCCTCAAATTCGTGGACAATTGGGAATTCTCTTTTTATCTACGTCCAAAGGAATTCTTAGTGATCGTGAAGCTCGATATTTTAAGCTTGGAGGTGAAATTCTCGGATATATTTCATAGATTCCTTCACAA------AAAAAACAATATACAAAGGGTTCCCATGGTTCCCGTGGTAAGGGTGTACAAC{CT}TCCNGGGGTCGTTTATCAACGTTTATCAAANNNNNNNNNNGGTGAGTTTGCACCTACACGCTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTCAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTGCATCCCTTGGGGTTTAGATTAGGTATTACACAACCTCATTTATCAAACTGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATAATTTTGTAAGAACTTTATTGTCAGAAAAATATAGTAGAGCACGATTTGAAAAAATTCAAATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATATTTTGATTGGGAAAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAACATTTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCAATTGCTGATTTTATTGTTGAACATCTGGAAAAACGAATTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAACT------------------------------TTAGGAATGAAAATCCAAATTTCTGGC Halimeda_discoidea_1_AY826360_AY826376_AY823890 AAAAACATGATAACTGGAGCGGCTCAAATGGACGGAGCAATTTTAGTAGTTTCTGGTGCCGATGGACCGATGCCTCAAACAAAAGAACATATATTATTAGCTCAACAAGTTGGAGTACCTGCAATAGTTGTTTTTCTTAATAAAATAGATCAGGTTGATGATAAAGAATTATTAGAACTTGTGGAACTTGAAATTCGAGAAACTTTAGATAAATATGATTTCCCAGGAGATTCGATTCCAATAATAAGTGGTTCAGCATTAGCAGCAGTGGAAGCATTAACAACAAATCCAATGATTCAAAGAGGTGAAAATGAATGGGTTGATAACATCTACAAATTAATGGATATTATTGATGATGAAATACCTCTGCCACCTAGAAATACAGAGAAAGACTTTTTAATGGCAATTGAAAATATTGTTTCTATTACAGGTCGTGGAACAGTTGCTACAGGTCGAGTTGAAAGAGGTCAAATAAAAGTTGGCCAAACTGTTGAAATTGTAGGTCTTAAAGAAACAAAAGAAACAACTGTTATTGGACTTGAAATGTTTCAAAAAACATTAGAAGAAAGTGTCGCTGGTGATAATGTTGGTGTTTTATTGCGTGGTATTCAAAAAAATGAAATTGAACGTGGTATGGTTTTAGCAAAACCAGGTTCTATTACACCTCATACTCGTTTTAAAGCTCAAGTTTATATTTTAAAAAAAGATGAAGGTGGACGTCATACTTCTTTTGTTGCAGGTTATAGACCACAATTTTATGTTCGAACAACAGATGTTACTGGTAAAATTGATTCTTTTCAAGGCGATGACGATAGTGTGATTCGTATGGTAATGCCAGGAGATCGAGTAAAAATTGTTGGTTTATCTTTAAAAAGTTTTGATGGCAGGGGAAATTACAATTTTGGTCTTGATGAACAACTTATGTTCCCAGAAATTCATTATGACCAAATACAACAAATCCGGGGAATGGATATTACAATTGTAACAACTGCTCAAACGGATCAAGAAGGATTAGCTTTATTACAAGAATTTGGTATGCCTTTTTATGAA---------TGAATGAAT------GAT---TCTCTCTCTGATCTTTTTACACGTATCCGCAATGCACAT---------TTAGTAGGT---CACCTGACAGTTACCGTTCCTTTGTCCTCTACTAACAAAAGCATTTTGGAAATTTTAGTACGTCATGGTTTTATTCAACATTTTGAT---CAA---------ATTCAGAAT---------CGACAATTTTTAGTAACCTTTAAATCAAAATCTGTTATTCGA------GAATTACAACGACTCAGTCGACCAGGCTGCCGACTTTATGTTTCAGCACAAAATATTCCTCAAATTCGTGGACAATTGGGAATTATCTTTTTATCTACGTCTAAAGGAATTCTTAGCGATCGTGAAGCTCGATATTTGAAGCTTGGAGGTGAAATTCTCGGATATATTTCATAGATTCCTTCACAA------AAAAAACAATATACA------------------------AAGGGTGTACAACTTCCTGGGGTCGTGTATCAATGTTTATCAAATGGTATGTTTGGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTCAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTGCATCCCTTGGGGTTTAGATTAGGTATTACACAACCTCATTTATCAAACTGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATAATTTTGTAAGAACTTTATTGTCAGAAAAATATAATAGAGCACGATTTGAAAAAATTCAAATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATATTTTGATTGGGAAAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAACATTTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCAATTGCAGATTTTATTGTTGAACATCTGGAAAAACGAATTCCCTATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAACT------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_discoidea_2_AY826361_AY826377_AY823892 AAGAACATGATTACTGGAGCAGCCCAAATGGATGGTGCAATTTTAGTAGTCTCTGGTGCTGATGGGCCAATGCCTCAAACAAAAGAGCATATATTATTAGCCCAACAAGTTGGTGTACCAGCAATTGTTGTTTTTTTAAATAAAATTGATCAGGTAGATGACCAAGATTTACTTGAACTTGTTGAACTTGAAATTCGAGAAACTTTAGATCGCTATGATTTTCCAGGAGATGAAATTTCAATAATTAGTGGTTCAGCTTTAGCGGCAGTGGAAGCACTAACAACAAATCCAATGATTCAAAGAGGTGAAAATGAGTGGGTTGATAAGATCTATAAATTAATGGATATTATTGATGATGAAATCCCTCTTCCACCTCGAAATACAGAGAAGGATTTTTTGATGGCGATTGAAAATGTTGTTTCGATCACAGGTCGTGGAACAGTTGCGACAGGTCGAGTTGAGAGAGGCCAAATAAAAGTAGGTCAAACTGTTGAAATTATAGGTCTGAAAGAAACAAAAGAAACAACTGTGATTGGACTGGAAATGTTTCAAAAAACATTAGAAGAAAGTGTTGCTGGTGATAATGTGGGTGTTTTATTGCGCGGTATTCAAAAAAATGAAATTGAACGTGGTATGGTGTTAGCAAAACCAGGTTCGATCAAACCTCACACGCGTTTTAAAGCTCAAGTTTATATTTTAAAAAAAGATGAAGGTGGACGTCATACTTCTTTTGTAGCAGGTTATAGACCACAATTTTATGTTCGAACTACAGATGTAACGGGAAAAATTGACTCGTTTCAAGGAGACGATGATAGTAAAATTCGTATGGTTATGCCAGGAGATCGAGTAAAAANNNNNGGTTTATCGGTTCAAAGTTTTGATGGTTGGGGCAATTACAATTTTGGTCTGGATGAACAACTCATGTTTCCAGAAATTCATTATGATCAAATACAACAGATCCGCGGAATGGATATTACAATTGTAACAACAGCTCAAACCGATCAGGAAGGTTTAGCTTTATTAAAAGAATTTGGTATGCCTTTTTATGAA---------TGAATGAAT------GAT---TCTCTCTCTGATCTTTTTACACGTATCCGAAATGCACAT---------TTAGTAGGT---CATCACACAGTTCCAGTGGCTTTGACTTCCACTAACAAGAGTATTTTAGACATTTTAGTCCGTCATGGTTTTATTAAAAATTTT------CAAAAA------ATTCAGAAT---------CGTCAGTTTCTAGTTACTTTTAAATGCAAGTGTGTTATCCGG------GAATTACAAAGACTCAGTCGACCAGGCTGTCGCCTCTATGTTTCATCACAAAATATTCCTAGAATTCGTGGACAATTAGCCATTATTTTTTTATCGACGTCCAAAGGAATTATGAGCGACCGTGAAGCTCGATATTTTAAACTTGGAGGTGAAATTCTTGGATATATCTTATAAATG---------------AAAAAACAA---------------------------CCAAAAGGTGTTCAACTACCAGGAGTAGTGTGCCAATGTTTATCAAACGGTATGTTTGGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACACCCATTAGGGTTTCGATTAGGTATTACACAACCTCATTTATCACAATGGTATGCTTCCAAAAGATATTATTCAAAATATGTATTGGAAGATCATTTTGTGAGAACAATATTGTCAGAAAAATATAAAAGAGCAAAATTTGAAAAAATTCACATTTCTCGTAAAATAGAAGATCACCTCGAAATAGTGATCCATGCTCAAAAACCTGATATTTTGATTGGAAAAAAAAGT------------------GAAACTCTAAAGAGTTTCCAAAAACAAATTAAAAAATACATTTTTCAATATCGGCAAATTGAATGGAACTCAAAACTTAAAGTTATTATATATATATTTCGATGTAAAATTCATGCATCTTCT---ATTGCTGATTTTATTGTAGAACATCTGGAAAAACGAGTTCCATATAAAGTTGTCTTCGTTTTATTAAAAAAACATTTGCAAAGACAAAAACACTCAGCT------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_discoidea_3_AY826362_AY826378_AY823895 AAAAACATGATTACTGGAGCGGCCCAAATGGATGGTGCAATTTTAGTAGTATCTGGTGCTGATGGGCCAATGCCTCAAACAAAAGAGCATATATTATTAGCCCAACAAGTTGGTGTACCAGCGATTGTTGTTTTTTTGAATAAAATTGATCAAGTAGACGACCAAGATTTACTTGAACTTGTTGAACTTGAAATTCGAGAAACTTTAGATCGTTATGATTTTCCTGGAGATGATATTTCAATAATAAGTGGTTCAGCTTTAGCAGCAGTGGAAGCACTAACAACAAACCCAATGATTCAACGAGGTGAAAATGAATGGGTTGATAAGATCTATAAATTAATGGATATTATTGATGATGAAATTCCTCTTCCACCTCGAAATACAGAGAAAGACTTTCTAATGGCGATTGAAAATGTTGTATCGATTACAGGTCGTGGAACAGTTGCGACAGGTCGAGTTGAGAGAGGCCAAATAAAAGTAGGTCAAACTGTTGAAATAATAGGTTTAAAAGAAACAAAAGAAACGACTGTGATTGGACTGGAAATGTTTCAAAAAACATTAGAAGAAAGTGTTGCTGGTGATAATGTGGGTGTTTTATTACGTGGTATTCAAAAAAATGAAATTGAACGTGGTATGGTTTTAGCAAAACCAGGTTCGATCAAACCGCACACGCGTTTTAAAGCTCAAGTTTATATTTTAAAAAAAGATGAAGGTGGACGTCATACTTCTTTTGTTGCAGGTTATAGACCNCAATTTTATGTTCGAACTACAGATGTAACGGGAAAAATTGACTCGTTTCAAGGAGATGATGATAGTAAAATTCGTATGGTTATGCCAGGAGATCGAGTAAAGANNNNNGGTTTATCCGTTCAAAGTTTTGATGGTTGGGGCAATTACAATTTTGGTCTAGATGAACAACTCATGTTTCCAGAAATTCATTATGATCAAATCCAACAGATCCGCGGAATGGATATTACAATTGTAACAACAGCTCAAACGGATCAAGAAGGTTTAGCTTTATTAAAAGAATTTGGTATGCCTTTTTATGAA---------TGAATGAAT------GAT---TCTCTCTCTGATCTTTTTACACGTATCCGAAATGCACAT---------TTAGTAGGT---CATCACACGGTTCGAGTGGCTTTGACATCCACTAACAAAAGTATTTTAGACATTTTAGTCCGTCATGGTTTTATTAAAAATTTT---CAT---AAA------ATTCAGAAT---------CGTCAGTTTCTAGTTACTTTTAAATCCAAGGGTGTTCTCCGG------GAATTACAACGACTCAGTCGGCCGGGCTGTCGCCTTTATGTCTCAGCACAAAACATTCCTCAAATTCGTGGACAATTGGCCATTATTTTTTTATCGACGTCCAAAGGAATTCTGAGCGATCGTGAAGCTCGAAATTTAAAACTTGGAGGTGAAATTCTTGGATATATCTTATAAATG---------------AAAAAACAA---------------------------CCAAAAGGTGTTCAATTACCGGGAGTCGTGTGCCAATGTTTATCAAACGGTATGTTTGGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAGAAAGTACATCCATTAGGATTTCGATTAGGTATTACACAACCTCATTTATCACAATGGTATGCTTCCAAAAAATATTATTCCAAATATATATTGGAAGATCATTTTGTGAGAACAATATTGTCAGAAAAATATAAAAGAGCAAAATTTGTAAAAATTCACATTTCTCGTAAAATAGAAGATCATTTCGAAATAGTGATCCATGCTCAAAAACCTGAGATTTTGATTGGAAAAAAAAGT------------------GAAACTCTAAAGAATTTCCAAAAACAAATTAAAAAATTCATTTTTCAATATCGGCAAATTGAATGGAACTCAAAACTTAAAGTTATTGTATATATATTTCGATGTAAAATTCATGCATCTTCT---ATTGCTGATTTTATTGTAGAACATCTGGAAAAACGAGTTCCATATAAAGTTGTGTTCGTTTTATTAAAAAAACATTTGCAAAGACAAAAACACTCAGCT------------------------------TTAGGAATGAAAATCCAAATTTCTGGC Halimeda_gracilis AAAAATATGATAACTGGTGCTGCTCAAATGGATGGAGCTATTTTAGTGGTATCTGGTGCTGATGGAACTATGCCTCAAACTAAAGAACATATTCTATTAGCACAACAAGTTGGAGTACCTGCAATTGTTGTTTTTCTTAATAAAATTGATCAAGTAGATGATGCTGATTTACTTGAACTGGTTGAACTTGAAATTAGAGATACTTTAAATCAATACGATTTTCCAGGTGATGACATTTCAATAATTAGTGGATCAGCGTTAGCAGCTGTAGAAGCCTTAACAACAAATCCAATGATTAAAAGAGGTGAGAATGAATGGGTCGATAAAATTTACAAACTCATGGATGTGATTGATGAAGAAATACCTCTTCCACCTCGAAGTACAGACAAAGATTTCCTGATGGCTGTTGAAAATGTGGTTTCAATAACAGGTCGTGGAACAGTTGCAACAGGTAGAGTTGAAAGAGGTCAAATAAAAGTTGGACAAACTGTTGAAATCGTAGGCCTTAAAGAAACAAAAGAAACAACTGTGATTGGACTTGAAATGTTCCAAAAAACATTAGAAGAAAGTGTTGCTGGCGATAATGTTGGTGTTTTATTGCGTGGTGTTCAAAAAAATGAAATTCAACGTGGTATGGTTTTAGCAAAACCTGGTTCTATTACACCTCATACTCGTTTTAAAGCTCAAGTCTATATTTTAAAAAAAGATGAAGGTGGACGACATACTTCTTTTGTGACAGGTTATCGACCNCAATTTTATGTTCGAACTACNGATGTAACTGGAAAAATTGATTCTTTCCAAGGAGATGACGATAGTGAAATTCGTATGGNGATGCCAGGGGATCGAGTAAAAATTATNGGTTTACCTTTAAAAAGTTTTGATGGGTGGGGTAATTATAATTTTGGTCTTGATGAACAACTTATGTTTCCGGAAATTCATTATGATCAAATACAACAAATTCGTGGCATGGATATTACTATTGTAACAACTGCTCACACGGATCAAGAAGGGTTAGCTTTATTAAAACAATTTGGTATGCCTTTTCGT---------ATATAAATT---TTGAACGAT---TCTATTTCTGATCTTTTTACTCGTATTCGAAATACTTCATCAGCTTCGCTGAGAGGGACATCAGATATTGTTCGAGTTCCTGTAACATCGACTACGAAAAGTATTTTGGAGATTCTCGCACGTCATGGTTTTATTAAAAATTTT---CGTCAA---------ATTAATAAT---------CGAGAGTTTTTAGTTACTCTCAAA------TCTGTTATTCGA------GAATTACAAAGACTGAGTCGACCCGGTTGTCGACTATATGTGTCTGCTAATAAGATTCCGAAAATT------CAATTAGGAGTAATTTTTTTATCCACATCCAAAGGAATTCTCAGTGATCGTGAAGCTAGACATCTTAAAGTTGGAGGTGAAATTCTCGGTTATGTTTCATAAATT------------AAAAAAAAACAA------------------------------AGGGGTGTACAACTTCAAGGTGTCGTTTGTCAATGTTTATCAAATGGTATGTTTGGTGAGTTTTCGCCAACACGTTATTTTCGAGGACATAAAACTACTGATAAA------AAATCTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCGTTGGGGTTTCGTTTAGGTATAACACAGCCTCATTTATCACAATGGTATGCTTCCAAAAAATATTATTCAAAATATGTATTGGAAGACAATTTTTTAAGAACAATATTACAAAAAAAATATAGTAGAGCAGGATTTGAAAAAATTGAAATTTCTCGTAAAGTAGAAAATCATATTGAAATCGTCATTCACGCTCAAAAACCTGATATTTTGATTGGAAAAAAAGGT------------------GAAAATTTAGAACTATTTCAAAAAGAAATAAAA---------------------------CATTTTAATACTAAAAAAAAAGTTATATTATATGTTCGTCGATGTAAAACGAGTGCATCCTCG---ATAGCTGATTTTATTGTACAAAATATCGAAAAACGAGTTCCATATAAACTGATATTCATTTTATTAAAAAAACATTTTAAAATTGAT------------------------------------------TTTGGAATGAAAATTCAAATTTCTGGC Halimeda_hummii AAAAACATGATAACTGGAGCAGCTCAAATGGATGGTGCTATTTTAGTAGTGTCTGGTGCTGATGGTCCAATGCCTCAAACAAAAGAGCATATATTATTAGCCCAACAAGTTGGAGTACCAGCTATTGTTGTTTTTCTGAATAAAGTTGATCAGGTGAATGACCAAGAATTACTTGAGTTGGTTGAACTTGAAATTCGCGAAACTTTAGATAGATATGATTTTCCAGGAGATGATATTTCAGTAATTAGTGGTTCAGCATTGGCAGCCGTGGAAGCACTAACTCTAAATCCAATGACTCAAAGAGGCGAAAATGATTGGGTTGATAAGATCTATAAATTAATGGATGTTATTGATGATGAAATCCCTTTACCACCTCGTAATACAGAGAAGGATTTTCTGATGGCGATTGAAAATGTTGTTTCTATTACAGGTCGGGGAACCGTTGCTACAGGTCGAGTGGAAAGAGGTCAAATAAAAGTAGGTCAAACTGTTGAAATTGTAGGTCTTAAAGAAACAAAAGAAACAACTGTGATTGGACTTGAAATGTTTCAAAAAACATTAGAAGAAAGTGTTGCTGGTGATAATGTTGGTGTTTTACTTCGCGGTGTTCAAAAAAATGAAATTGAACGTGGTATGGTTTTAGCAAAACCTGGTTCTATTAAACCTCATACGCGTTTTAAAGCTCAAGTCTATATTTTAAAAAAAGATGAAGGTGGACGTCATACTTCTTTTGTTGCAGGTTACCGACCACAATTTTATGTCCGAACTACAGATGTAACTGGTAAAATCGACTCTTTTCAAGGAGATGATGATAGTAAAATTCGTATGGTTATGCCAGGAGATCGAGTAAAAATTATTGGTTTATCTTTAGAAAGTTTTGATGGTTGGGGAAATTACAATTTTGGTCTTGACGAACAACTCATGTTTCCAGAAATTCATTATGATCAAATACAACAAATCCGTGGAATGGATATTACAATTGTAACAACTGCTCAAACGGATCAAGAAGGATTAGCTTTATTACAAGAATTTGGTATACCTTTTAATATA------ATATAAATGAAT------GAT---TCTCTCTCTGATCTTTTTACACGTATTCGTAATGCATAT---------TTAGTAGGT---CATAATATGGTTCGAGTTCCTTTGACTTCCACTAACAGGAGCATTTTGGAAATTTTAGTTCGTCATGGTTTTATTCAAAATTTT---CAT---AAGCAGGAAATGCCCACATTTCCATTTCAACAGTTTTTAGTTACATTCAAATCCAAATTTGTTATTCGA------AAATTACAACGACTTAGTCGCCCAGGCTGTCGACTCTATGCTTCGGCACAAAATATTCCTCAAATTCGTGGACAATTGGGCATTATTTTTATATCTACGTCCAAAGGTATTCTCAGTGATCGTGAAGCTCGTTATTTTAAACTTGGAGGAGAAATTCTCGGATATATTTCATAGATGAAT---------AAGAAAAAACAA---------------------------CCAAAAGGTGTCCAAATGCCAGGAGTAGTCTGTCAATGTTTATCAAATGGTATGTTTGGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTCAACGTAAAAGTAAAGGTAAAGGTAAAAAGAAAACGTCATAAATAAATATGGGACAAAAAGTACATCCGTTGGGGTTTCGATTAGGTATCACACAACCTCATTTATCACAATGGTATGCTTCCAAAAGACATTATTCAAAATATGTATTGGAAGATAATTTTGTAAGAACAATATTGTCAGAAAAATATAAAAGAGCCAAATTTGAAAAAATTCAAATTTCTCGTAAAATAGAAGATCATCTCGAAATAGTGATCCACGCCCAAAAACTTGATATTCTGATTGGAAAGAAAAGT------------------GAAAATTTAGAGATTTTTCAAAAACAAATTAAAAAATTCATTTTTCAATATCGGCAAATTGAATGGAATTCAAAACTTAAAGTTATATTATATATCTTTCGATGTAAAAATACTGCATCTTCT---ATTGCTGATTTTATTGTAGAACATCTGGAAAAACGAGTTCCATATAAAGTTGTATTTGGTTTATTAAAAAAACATTTACAAAGACAAAAACACTCAGCT------------------------------TTAGGAATGAAGGTTCAAATTGCTGGC Halimeda_lacunalis AAGAATATGATAACAGGAGCAGCGCAAATGGATGGTGCTATTTTAGTAGTCTCTGGTGCTGATGGGCCAATGCCCCAAACAAAAGAACATATATTATTAGCTCAACAGGTTGGTGTGCCCGCTATTGTTGTTTTTTTAAATAAAATTGATCAGGTCGATGATCAAGACTTACTTGAACTTGTTGAACTTGAAATTCGAGAAACTTTAGATCGATATGATTTCCCTGGAGATGAGATCCCAATTATTAGTGGTTCAGCATTAGCAGCAGTGGAAGCATTAACTACAAATCCGATGATTCAAAGAGGTGAAAATGATTGGGTTGATAAGATTTACAAATTAATGGATATCATAGATGATGAAATACCTCTGCCACCTCGAAATACAGAGAAGGATTTTTTGATGGCTATTGAAAATGTTGTTTCTATTACAGGTCGGGGAACAGTTGCTACAGGTCGAGTTGAAAGAGGTCAAATAAAAGTAGGTCAAACTGTTGAAATTGTAGGCCTTAAAGAAACAAAAGCAACAACTGTTATTGGACTTGAAATGTTTCAGAAAACACTAGAAGAGAGTGTTGCTGGTGATAATGTTGGTGTTTTATTACGTGGTGTTCAGAAAAATGAAATTGAACGGGGTATGGTGTTAGCAAAACCTGGTTCTATTAAACCTCATACTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGG{GT}TTATCTTTAAAAAGTTTTGATGGTTGGGGTAATTACAATTTTGGTCTTGACGAACAACTCATGTTTCCAGAAATTCATTACGATCAAATACAACAGATTCGTGGAATGGATATTACAATTGTAACAACTGCTCAAACCGATCAAGAAGGATTAGCTTTATTACAAGAGTTTGGTATGCCTTTTTATGAA---------TGAATGAAT------GAT---TCTCTCTCTGATCTTTTTACACGTATCCGAAATGCACAT---------TTAGTAAGT---CATAATACGGTTCGAGTTCCGTTGACATCTATAAATAGGAGTGTTTTGGAAATTTTAGTACGTCATGGTTTTATTCAAAATTTTGAT---CAA---------ATTCAGAAT---------CGACAGTTTTTAGTTACGTTCAAATCCAAACAAACTCTCCCTTCCTTTGAGTTACAACGCCTCAGTCGACCAGGCTGTCGACTCTATGTTTCGGCACAAAACATTCCTCAAATTCGTGGACAATTGGGTATTATCTTTTTATCTACGTCTAAAGGAATTCTTAGCGATCGTGAAGCTCGCTATTTTAAACTTGGAGGGGAAATTCTTGGATATATTTCATAAATG---------------AAAAAACAA---------------------------CCAAAGGGTGTCCAACTCCCGGGTGTAGTATACCAATGTTTATCAAATGGTATGTTTGGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTCAAACGTAAAAAAAGT------CGT---------------TAA------ATGGGACAAAAAGTACATCCGTTAGGGTTTCGATTAGGTATCACACAACCTCATTTATCACAATGGTATGCTTCTAAAACAAATTATTCAAAATATGTATTGGAAGATAATTTTATAAGAACAATATTGTCAGAAAAATATAAAAGAGCAAAATTTGTAAAAATTCAAATTTCTCGTAAAATAGAAGATCACCTCGAAATAGTGATCCACGCTCAAAAACCTGATATTTTGATTGGAAAAAAAATTGACAGTCGA---------GAATCTTTAAAAATTTTTCAGAAACAAATTAAGAAATTCATTTTTCAATATCGGGGAATTGAATGGAATTCTAAACTCAAAGTTATATTATATATATTTCGATGTAAAACTAGTGCATCTTCT---ATTGCTGATTTTATTGTAGAACATTTGGAAAAACGCGTTCCATATAAAGTCGTATTTGTTTTATTAAAAAAACATTTACAAAGACAAAAACATTCAGCT------------------------------TTAGGAATGAAAATTCTCATTTCTGGC Halimeda_macrophysa AAAAACATGATTACTGGAGCAGCTCAAATGGATGGAGCAATTTTAGTGGTTTCTGGTGCTGATGGACCAATGCCTCAAACAAAAGAACATATATTATTAGCTCAGCAAGTTGGTGTGCCAGCTATAGTTGTTTTTCTTAATAAAATTGATCAGGTTAATGATCGAGAGTTATTAGAACTTGTGGAACTTGAAATTCGGGACACTTTAGACCGATATGATTTTCCAGGGGATGAGATTCCAGTAATTAGTGGTTCAGCCTTAGCAGCAGTGGAAGCATTAACGACAAATCCAATGATTCAAAGAGGTGAAAATAAATGGGTTGATAACATTTATGAATTAATGGATATGATTGATGATGAAATACCTCTGCCACCTCGAAATACAGAGAAAGATTTTTTGATGGCAATTGAAAATGTTGTTTCGATAACAGGTCGGGGAACAGTTGCTACAGGCCGAGTTGAAAGAGGTCAAATAAAAGTAGGACAAACTGTTGAAATTGTAGGCCTGAAAGAAACAAAAGAAACAACTGTTATTGGACTTGAAATGTTTCAAAAAACATTAGAAGAAAGTGTTGCTGGTGATAATGTTGGTGTTTTATTGCGTGGTATTCAAAAACATCAAATTGAACGTGGTATGGTTTTGGCAAAACCAGGTTCAATTACACCTCATACTCGTTTTAAAGCTCAGGTCTATATTTTAAAAAAAGATGAAGGTGGACGTCATACTTCTTTTGTTGCAGGTTATAGACCACAATTTTATGTTCGAACTACAGATGTTACTGGTAAAATTGATTCTTTTCAAGGAGATGATGATAGTGTAATTCGTATGGTAATGCCAGGGGATCGAGTAAAAATTGTTGGTTTATCTTTACAAAGTTTTGATGGCAAGGGAAATTACAATTTTGGTCTTGATGAACAACTCATGTTTCCAGAAATTCATTATGATCAAATACAACAAATCCGCGGAATGGATATTACAATTGTAACAACTGCTCAAACGGATCAAGAAGGATTAACTTTATTACAACAATTTGGTATGCCTTTTTATGAATTT---ATTTGAATGAATTTATTTGATGATTCTCTCTCTGATCTTTTTACACGCATTCGAAATGCACAT---------TTAGTAGGT---CATATGACAGTTCGAGTTCCTTTTTCTTTTACTAATAAAAGTATTTTAGATATTTTAGTACGTCATGGTTTTATTCTCAATTTTGAT---CAA---------ATTCAAAAT---------CAACAGTTTTTAGTTACGTTTAAATCCAAATCTGTTATTCGA------GAATTACAACGACTCAGTCGACCAGGCTGTCGACTTTATGTTTCAGCACAGAACATTCCTCAAATTCGTGGACAATTGGGAATTCTATTTTTATCTACATCCAAAGGAATTCTTAGCGATCGTGAAGCTCGATATTTGAAGCTTGGAGGAGAAATTCTCGGATATATTTCATAGATGACTTC{AC}CAAAAAAAAAAAAAACATGTCAAA------------------CATGCCAAAGGTGTACAACTACCCGGGATCGTTTTTCAATGTTTATCCAATGGTATGTTTGGTGAGTTTGCACCTACACGTTCTTTTCGGGGTCATAAAAACACTGATAAA------AAATTCAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCTTTGGGGTTTCGATTAGGTATTACACAACCTCATTTATCACAATGGTATGCTTCCAAAAAATACTATTCTAAATATGTCTTGGAAGATAATTTTATAAGAACTCTATTGTCAGAAAAGTATAATAGAGCACGATTTGAAAAAATACACATTTCTCGTAAAATAGAAGATCATATTGAAATAGTGATCTATGCTCAAAAACCTGATCTTCTGATTGGCAAAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAAAATCTATTTTTCAATATCGAGAAATTGAATGGAACTCAAACCTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAACGTATTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAACT------------------------------TTAGGTATGAAAATTAAAATTTCTGGC Halimeda_magnidisca NNNNNNNNNNNNNNTGGAGCGGCTCAAATGGACGGAGCAATTTTAGTAGTTTCTGGTGCTGATGGACCAATGCCTCAAACAAAAGAACATATATTATTAGCCCAACAAGTGGGTGTGCCTGCTATAGTAGTTTTTCTGAATAAAATAGATCAAGTTGATGATAAAGAATTATTAGAACTTGTGGAGCTTGAAATCCGAGAAAATTTAGATAAATATGATTTTCCAGGAGATGAGATTTCAATAATAAGTGGTTCAGCATTAGCTGCAGTGGAAGCGTTAACAACAAATCCAATGATTCAAAGAGGTGAAAATGAATGGGTTGATAATATCTATAAATTAATGGATATTATTGATGATGAGATACCTTTGCCGCCTAGAAATACAGAGAAGGACTTTTTGATGGCAATTGAAAATGTTGTTTCGATTACAGGTCGTGGAACAGTTGCTACAGGTCGAGTTGAAAGAGGTCAAATAAAAGTAGGTCAAACTGTTGAAATTGTAGGTTTGAAAGAGACAAAAGAAACAACTGTTATTGGACTTGAAATGTTTCAAAAAACNTTAGAAGAAAGTGTTGCTGGTGATAATGTTGGTGTTTTATTGCGTGGTATTCAAAAAAATGAAATTGAACGTGGTATGGTTTTAGCAAAACCAGGTTCGATTACACCTCATACTCGTTTTAAAGCTCAAGTTTATATTTTAAAAAAAGATGAAGGTGGGCGACATACTTCTTTTGTTGCAGGTTATAGACCNCAATTTTATGTTCGAACAACAGATGTGACTGGTAAAATTGATTCTTTTCAAGGTGATGATGATAGTATGATTCGTATGGTAATGCCAGGAGATCGAGTAAAAATTGTGGGTTTATCTTTACAAAGTTTTGATGGTCGGGGAAATTACAATTTTGGTCTTGATGAACAACTCATGTTTCCAGAAATTCATTATGACCAAATACAACAAATCCGTGGAATGGATATTACAATTGTAACAACTGCTCAAACGGATCAAGAAGGATTAGCTTTATTACAAAAATTTGGTATGCCTTTTTATGAA---------TGAATGAAT------GAT---TCTCTCTCTGATCTTTTTACACGTATCCGAAACGCACAT---------TTAGTAGGT---CATCTGACAGTTCCAGTTCCTTTATCCTCTACTAATAAAAGCATTTTGGACATTTTAGTACGTCANGGTTTTATTCAACATTTTGAC---CAA---------ATTCAAAAT---------CGCCAGTTTTTAGTTACCCTAAAATCAAAATCTGTTATTCGA------GAATTACAACGACTCAGTCGACCAGGCTGCCGACTTTATGTTTCTGCACAAAACATTCCTCAAATTCGTGGACAATTGGGAATTCTCTTTTTATCCACGTCCAAAGGGATTCTAAGCGATCGTGAAGCTCGATTTTTGAAGCTTGGAGGTGAAATTCTCGGATATATTTCATAAATTTCTTCACAA------AAAAAACAA------------------------TATCCAAAAGGTGTACAATTGCCTGGGGTCGTTTACCAATGTTTATCAAATGGTATGTTTGGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCCTTGGGATTTCGATTAGGTATTACACAACCTCATTTATCACATTGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGACCATTTTGTAAGAACTCTATTGTCAGAAAAATATAATAGAGCACGATTTGAGAAAATTCAAATTTCTCGTAAAATCGAAGATCATCTTGAAATAGTGATCTATGCTCAAAAACCTGATATTCTGATTGGTAAAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAACATTTATTTTTCAATATCGACAAATTGAATGGAACTCAAAATTGAAAGTTATATTATATATATTTCAGTGTAAAATGAGTGCGTCATCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAACGAATTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGACAAAAACAATCAACT------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_taenicola NNNNNCATGATCACTGGAGCGGCTCAAATGGATGGGGCAATTCTAGTAGTTTCTGGTGCTGATGGGCCAATGCCTCAAACAAAAGAACATATATTATTAGCCCAACAAGTAGGTGTGCCAGCTATAGTTGTTTTCTTGAATAAAATTGATCAGGTTGATGATCAAGATTTATTAGAACTTGTGGAACTTGAAATTCGAGAAACTTTAGACCGCTATGATTTTCCAGGAGATGAGATTCCAATAATTAGTGGTTCAGCATTAGCAGCAGTGGAAGCATTAACAACAAATCCAATGATTCAAAGAGGTGAAAATGAATGGGTTGATAACATCTATAAATTAATGGATATTATTGATGATGAAATACCTCTGCCACCTCGAAATACAGAAAAAGATTTTTTAATGGCAATTGAAAATGTTGTTTCAATAACAGGTCGAGGAACAGTTGCTACAGGCCGAGTTGAAAGAGGTCAAATAAAAGTAGGACAAACTGTTGAAATTGTAGGCCTTAAAGAAACAAAAGAAACAACTGTAATTGGACTTGAAATGTTTCAAAAAACATTAGAAGAAAGTGTTGCTGGTGATAATGTTGGTGTTTTATTACGTGGTATTCAAAAAAATCAAATTGAACGTGGTATGGTTTTGGCAAAACCAGGTTCTATTACACCTCATACTCGTTTTAAAGCTCAAGTCTATATTTTAAAAAAAGATGAAGGTGGACGTCATACTTCTTTTGTTGCAGGTTATAGACCACAATTTTATGTTCGAACAACAGATGTTACTGGTAAAATTGATTCTTTTCAAGGAGATGACGATAGTGTGATTCGTATGGTAATGCCAGGAGATCGAGTAAAAATTNNNGGTTTATCTTTACAAAGTTTTGATGGCAGGGGAAATTACAATTTTGGTCTTGATGAACAACTTATGTTTCCAGAAATTCAGTATGATCAAATACAACAAATTCGTGGAATGGATATTACAATTGTAACAACTGCTCAAACGGATCAAGAAGGACTAGCTTTATTACAAGAATTTGGTATGCCTTTTTATGAA---------TGAATGAAT------GATGATTCTCTCTCTGATCTTTTTACACGTATTCGCAATGCACAT---------TTAGTAGGT---CATCTGACAGTTTTAGTTCCTTTGTCCTCTACTAATAAAAGCATTTTAGAGATTTTAGTACGTCATGGTTTTATTCAAAATTTTGAC------CCA------ATTCAAAAT---------CAACAGTTTTTAGTTACCTTCAAACCAAAATCTGTTATTCGA------GAATTACAACGACTCAGTCGACCAGGCTGCCGACTTTATGTATCAGCACAAAACATTCCTCAAATTCGTGGACAATTGGGAATTCTTTTTTTATCTACGTCCAAAGGAATTCTTAGCGATCGTGAAGCTCGATATTTGAAGCTTGGAGGTGAAATTCTCGGATATATTTCATAGATTCCTTCAAAATCAAAAAAAAAACAA------------------------CATGTGAAAGGTGTACAACTGCCGGGGGTCGTTTATCAATGTTTATCAAATGCTATGTTTGGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTCAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCCTTGGGATTTCGATTAGGTATTACACAACCTCATTTATCACAATGGTACGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATTATTTTGTAAGAACTCTATTGTTAGAAAAATATAATAGAGCAGGATTTGAAAAAATTCACATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTAGTTCATGCTCAAAAACCTGATATTTTGATTGGAAAAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAACATTTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAACGAATTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAACT------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_tuna_1_AY826367_AY826383_AY823910 AAAAACATGATAACTGGAGCGGCTCAAATGGATGGTGCTATTTTAGTAGTCTCTGGTGCTGATGGTCCAATGCCTCAAACAAAAGAGCATATATTATTAGCCCAACAAGTTGGGGTGCCAGCCATTGTTGTTTTTCTGAACAAAGTTGATCAGGTGGATGACCAAGAATTACTTGAGTTGGTTGAACTTGAAATTCGAGAAACTTTAGATCGATATGATTTTCCCGGAGATGATATTTCAATCATTAGCGGGTCAGCATTAGCAGCCGTGGAAGCATTAACTCTAAATCCAATGACTCAAAGAGGTGAAAATGAGTGGGTTGATAAGATCTATAAATTAATGGATGTTATTGATGATGAAATCCCTTTACCACCTCGTAATACAGAGAAAGATTTTCTGATGGCGATTGAAAATGTTGTTTCTATTACAGGTCGGGGAACCGTTGCTACAGGTCGAGTGGAAAGAGGTCAAATAAAAGTAGGTCAAACTGTTGAAATTGTAGGTCTTAAAGAAACAAAAGAAACAACTGTGATTGGACTTGAAATGTTTCAAAAAACATTAGAAGAAAGTGTTGCTGGTGATAATGTTGGTGTTTTACTTCGCGGTGTTCAAAAAAATGAAATTGAACGTGGTATGGTTTTAGCAAAACCTGGTTCTATAAAACCTCATACACGTTTTAAAGCTCAAGTCTATATTTTAAAAAAAGATGAAGGCGGACGTCATACTTCTTTTGTTGCCGGTTACCGACCACAATTTTATGTACGAACTACAGATGTAACTGGTAAAATCGATTCTTTTCAAGGAGATGATGATAGTAAAATTCGTATGGTTATGCCAGGAGATCGAGTAAAAATTATTGGTTTATCTTTAAAAAGTTTTGATGGTTGGGGAAATTACAATTTTGGTCTTGACGAACAACTCATGTTTCCAGAAATCCATTATGATCAAATACAACAAATCCGTGGAATGGATATTACAATTGTAACAACTGCTCAAACGGATCAAGAGGGATTAGCTTTATTACAAGAATTTGGTATGCCTTTTTATGTT------TTATGAATGAAT------GAT---TCTCTCTCTGATCTTTTTACACGTATCCGAAATGCACAT---------TTAGTAGGT---CATCACATGGTTCGAGTTCCTTTGACTTCCACTAACAGGAGCATTTTGGAAATTTTAGTTCGTCATGGTTTTATTCAAAATTTT---CAT---AAA------ATTCCTGAT---CGTAAGAAACAATTTTTAGTTACATTCAGATCCAAGTCTGTTATTCGA------GAATTACAACGACTTAGTCGCCCAGGCTGTCGACTCTATGTTTCGGCACAAAATATTCCTACAATTCGTGGACAATTGGGCATTATTTTTATATCTACGTCCAAAGGCGTTCTTAGTGATCGTGAAGCTCGTTATTTTAAACTTGGAGGGGAAATTCTCGGGTATATTTCATAGATG---------------AAAAAACAA---------------------------CCAAAAGGTGTCCAACTGCCAGGAATAGTCTGTCAATGTTTATCAAATGGTATGTTTGGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTCAACGTAAACGTAAA------CGTCAT------------TAA------ATGGGACAAAAAGTACATCCGTTGGGGTTTCGATTAGGTATCACACAACCTCATTTATCACAATGGTATGCTTCTAAAAAACATTATTCAAAATATGTATTGGAAGATAATTTTGTAAGAACAATATTGTTAGAAAAATATAAAAGAGCCAAATTTGAAAAAATTCAAATTTCTCGTAAAATAGAAGATCATCTCGAAATAGTGATCCATGCCCAAAAACCTGATATTCTGATTGGTAAAAAAAGT------------------GAGAATTTAGAAGTTTTTCAAAAACAAATTAAAAAATTCATTTTTCAATATCGGCAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATTTTTCGATGTAAAAATACTGCATCTTCT---ATAGCTGATTTTATTGTAGAAAATTTAGAAAAAAGAGTTCCATATAAAGTTGTATTTGTTTTATTAAAAAAACATTTACAAAGACAAAAACACTCAGCT------------------------------TTAGGAATGAAGGTTCAAATTGCTGGC Halimeda_tuna_2_AY826366_AY826382_AY823907 NNNNNCATGATCACTGGAGCGGCTCAAATGGATGGTGCTATTTTAGTCGTGTCTGGTGCTGATGGTCCAATGCCTCAAACAAAAGAGCATATATTGTTAGCCCAACAAGTTGGAGTGCCGGCTATTGTTGTTTTTTTAAATAAAATAGATCAGGTAGAAGACCAAGACTTATTGGAACTTGTTGAACTTGAAATTAGAGAAACTTTAGATCGATATGAGTTTCCCGGAGATGAGATTTCCATCATTAGTGGCTCAGCACTCAAAGCAGTGAACGCACTCCTTAAGAATCCCCTTATTCAAAGAGGTGAAGATGAGTGGGTTGATAAGATTCATAAATTAATGGATATCATTGATGATGAAATCCCTTTGCCACCTCGAGATATAGAGAAAGACTTTTTGATGGCGGTTGAAAATGTTGTTTCGATTACAGGTCGAGGAACAGTTGCTACAGGTCGAGTTGAAAGAGGTCAAATACAAGTAGGGCAAACTGTTGAAATTGTAGGCCTTAAAAAAACAAAAGAAACAACAGTGATTGGACTTGAAATGTTTCAAAAAACATTGGACAAAAGTGTTGCTGGTGATAATGTTGGTGTTTTATTACGTGGTGTTCAAAAAACTGAAATTGAGCGTGGTGTGGTTTTAGCAACACCAGGGTCTATAAAACCTCATACTCGTTTTAAAGCTCAAGTCTATATTTTAAAAAAAGATGAAGGTGGACGTCATACTTCTTTTGTCGCAGGTTATCGACCACAATTTTATGTTCGAACTACAGATGTCACTGGCAAAATTGACTCTTTTCAAGCAGACGACGATAGTAAAATTCGTATGGTTATGCCAGGAGATCGAGTAAANNNNNNNGGTTTATCTTTACAAAGTTTTGATGGGTGGGGAAATTACAATTTTGGTCTTGAGGAACAACTTATGTTTCCAGAAATTCATTACGATAAAATACAACAAATCCGTGGGATGGATATTACAATTGTAACAACGGCTCAAACAGATCAAGAAGGACTCGCTTTATTACAAGAATTTGGTATGCCTTTTTATGGATTCTCTCTCTGAATG---------GAT---TCTCTCTCTGATCTTTTTACACGTATCCGAAATGCACAG---------TTAGCAGGT---CATCATACAGTTCGAGTGCCTATGACATCTATTAACAGGCGTATTTTGGAAATTTTAGTACGTCACGGTTTTATTCAAAATTTTGATCACTCT------------------------------------CTAGTTACTTTCAAATCCAAATTTGTCATTCGA------GAATTACAACGACTCAGTCGACCAGGGTGTAGACTCTATGTTTCGGCCCAAAACATCCCTCGAATTCGTGGAAAATTGGGACTTATCTTTTTATCTACGTCCAAAGGAATCCTGAGCGATCGTGAAGCTCGCTATTTTAAGCTTGGAGGCGAAATTCTTGGATACATTACATGAATG---------AAAAAGAAAAAACAA---------------------------CCAAAAGGTGTTCAACTGCCAGGGGTCGTGTATCAATGTTTATCAAATGGTATGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGGTCATAAAAAGACTGATAAAAAAGTCAAACTCAAACGT---------------CGTCGTAAA------AGTTAA------ATGGGACAAAAAGTACATCCGTTAGGGTTTCGAGTAGGAATTACACAACCGCATTTATCACAATGGTACGCTTCCAAGAGATATTATTCACAATATGTATTGGAAGATAATTTTATAAGGACAATATTGTTAAAAAAGTATAAAAGAGCAAATTTTTCAAAAATTCATATTTCTCGTAAAACAGACGATCACTTCGAAATAGTGATCCATGCTCAAAACCTGGGAATTCTGATTGGTACAAAAAGTGAAAAAAGTGAAAAAAGTGAAAAATTCAAACTTTTTCAAAAACAAATCAAAGAGTTCATTTTTCACTATCGACAAAGTGAATGGAACTCAAAACTGAGAGTTGTATTACATATATTTCGATGTAAAACGAGTGCATCTTCT---ATTGCTGATTTTATTGTGGAACATCTGGAAAGACGCGTTCCATATAAAGTTGTATTTAATTTATTAAAAAAACATTTACAAAGACAAGAACGACAAGAACGACAAGAACACTTTGATTCAGCTTTAGGGATAGGGATGAAAATTCAAATTTCTGGC ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = plastid_concatenated) = N: 1-2250; CODONPOSSET CodonPositions (CHARACTERS = plastid_concatenated) = N: 1-2250; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M1038] TITLE 'SSU-ITS'; LINK TAXA = Taxa4; DIMENSIONS NCHAR=1756; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=N GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 1510 1520 1530 1540 1550 1560 1570 1580 1590 1600 1610 1620 1630 1640 1650 1660 1670 1680 1690 1700 1710 1720 1730 1740 1750 1760 1770 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Halimeda_cuneata_1_KZN2K4_21_AY823840 GCTCGTAGTTGGACTTCTGGCGACCGCGTTCGGTCCGCCGTGCGCGAGCACTGTCCGCGGTTGTCGTCTCTGTCGACGTGGCGCGTCGGACTTGATTGGCCGGTGCGTCGTCTGTCGGCGATGTTACTTTGAGGAAATCAGAGTGCTCAAAGCAAGCGTTCGCTCGTGACTTCACTAGCATGGAATAACACAGATGGGCTCTTTCTCGCACTGTTGGTCTGCGTCAATTGAGCAACGATCGATAGAGACGGTCGGGGGCATTCGTATTGCGCAGTTAGAGGTGAAATTCTCCGATCTGCGCAAGACGNACTAATGCGAAAGCAGTTGCCAAGGACGTCCTCTTATGATCAAGAGCGAAAGTCGGGGGATCAAAGATGATTAGATACCGTCGTAGTCCCGACCATAAATGATGCCGACTGAGCTTCGGCGACTCGACCTCAGGTCGTACGTCGGCGCTCTTAGAGAAATTAAAGTCTTTGGGCTCCGGGGGTAGTATGGTCGCAAGTCTGAAACTTGAAGGAATTGACGGAAGGGCACCACAAGGCGTGGATGTTGCGGCTTAATTTGACTCAACACGGGAAAGCTTACTAGGTTTGGACACCTTTGTGATGGACAGATTGAAGCTCTTACCCTACTGCGTGGATGGTGGTGCATGGTCGTTCTCAGCCCGTGGGTTGACCTGTCAGGTTTACTCCGGTAACGCGCGAGACCTCGGTCTACTAAATAGACGCGGCTGTCTCGGCACCCGCGCTCTTCTTAGAGAGAGACTCGACGAGAGTCGAGGGAAGTCGAGGCAATAACAGATCTGTGATGCCCTTAGTTATCCTAGGTCGCACGCGCCATACAATGTGGCGCACAACGAGTCTCCTTGGCCGACAGGATGCCCCGTGCGCGGTCGACGACGCAGCCCTCTCGGTCGTCGGGCAGACTCGGCGAGAGTGGCCCGTCCTCCTGACTGGGCGGTCG-CCGACGCCGCGGGATTCTGGGCAATCTGGCAGAGCGCTACGTGACTGGGCTAGACTTTTGTAATTTTTGGTCTTGAACGAGGAATGCCTAGTAATCGCAGGTCAGCATCCTGCGATGATTCNGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCATCCG-TGGCATGCGCCGGTGAAGAGGGGGAGGCAGCGTCGGTCGGGTAACACCGT-TCGTACGTGGAACCCCTCTGAACCTTCGCACGTAGAGGAAGGAGAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACGA-------GAATT---C--GAAC--AGGCG-TCAG--C--------CAA----G--GCGA--CGCCGGAGTCTAGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCCTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCCGCG--CCAGTGCTCTCCCCTCGG-TCGC-GGAGAGGCGGCAGTGGACGAGACACCCG----ACGGAC--G---TCGGCGTGTCCGTGCCAGCGC-GCCGGTCTCCAACGCTC-GG--TCGAAGGACTTG-A-GCG----ACGGACGACAGT---C-GA--GAC--GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_cuneata_2_KZNb2352_AY823841 GCTCGTAGTTGGACTTCTGGCGACCGCGTTCGGTCCGCCGTGTGCGAGCACTGTCCGCGGTCGTCGTCTCTGTCGACGTGGCGCGTCGGACTTGATTGGCCGGTGCGTCGTCTGTCGGCGATGTTACTTTGAGGAAATCAGAGTGCTCAAAGCAAGCGTTCGCTCGTGACTTCACTAGCATGGAATAACACAGATGGGCTCTTTCTCGCACTGTTGGTCTGCGTCAATTGAGCAACGATCGATAGAGACGGTCGGGGGCATTCGTATTGCGCAGTTAGAGGTGAAATTCTCCGATCTGCGCAAGACGTACTAATGCGAAAGCAGTTGCCAAGGACGTCCTCTTATGATCAAGAGCGAAAGTCGGGGGATCAAAGATGATTAGATACCGTCGTAGTCCCGACCATAAATGATGCCGACTGAGCTTCGGCGACTCGACCTCTGGTCGTACGTCGGCGCTCTTAGAGAAATTAAAGTCTTTGGGCTCCGGGGGTAGTATGGTCGCAAGTCTGAAACTTGAAGGAATTGACGGAAGGGCACCACAAGGCGTGGATGTTGCGGCTTAATTTGACTCAACACGGGAAAGCTTACTAGGTTTGGACACCTTTGTGATGGACAGATTGAAGCTCTTACCCTACTGCGTGGATGGTGGTGCATGGTCGTTCTCAGCCCGTGGGTTGACCTGTCAGGTTTACTCCGGTAACGCGCGAGACCTCGGTCTGCTAAATAGACGTGGCTGTTTCGGCACCCGCGCTCTTCTTAGAGAGAGACTCGACGAGAGTCGAGGGAAGTCGAGGCAATAACAGATCTGTGATGCCCTTAGTTATCCTAGGTCGCACGCGCCATACAATGTGGCGCACAACGAGTCTCCTTGGCCGACAGGATGCCCCGTGCGCGGTCGGCGACGCAGTCCGCTCGGTCGTCGGGCAGACTCGGCGAGAGTGGCCCGTCCTCCTGAGTGGGCGGTCG-TCGACGCCGCGGGATTCTGGGCAATCTGGCAGAGCGCTACGTGACTGGGCTAGACTTTTGTAATTTTTGGTCTTGAACGAGGAATGCCTAGTAATCGCAGGTCAGCATCCTGCGATGATTCGGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCATCCG-TGGCATGCGCCGGTGAAGAGGGGGAGGCAGCGTCGGCCGGGTAACACCGG-TCGTACGTGGAACCCCTCTGAACCTTCGCACGTAGAGGAAGGAGAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACGA-------GAATT---C--GAAC--AGGCG-TCAG--CGCTTCG--CAA----GAGGCGA--CGCCGGAGTCTAGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCCTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCCGCG--CCAGCGCTCTCCC-TC-GATCGC-GGAGAGGCGGCAGTGGACGCGACACCCG----ACCGAC--G---TCGGCGTGTCCGTGCCAGCGC-GCCGGTCGCCGCAGCTC-GG--TCGAAGGACC-GCA-GC----CACGGACGACAGT---C-GA--GAC--GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_cuneata_3_WA182_AY823838 GCTCGTAGTTGGACTTCTGGCGACNGCGTTCGGTCCGCCGTGCGCGAGCACTGTCCGCGGTCGTCGTCTCTGTCGACGTGGCGCGTCGGACTTGATTGGCCGGTGCGTCGTCTGTCGGCGATGTTACTTTGAGGAAATCAGAGTGCTCAAAGCAAGCGTTCGCTCGTGACTTCACTAGCATGGAATAACACAGATGGGCTCTTTCTCGCACTGTTGGTCTGCGTCAATTGAGCAACGATCGATAGAGACGGTCGGGGGCATTCGTATTGCGCAGTTAGAGGTGAAATTCTCCGATCTGCGCAAGACGCACTAATGCGAAAGCAGTTGCCAAGGACGTCCTCTTATGATCAAGAGCGAAAGTCGGGGGATCAAAGATGATTAGATACCGTCGTAGTCCCGACCATAAATGATGCCGACTGAGCTTCGGCGACTCGACCACAGGTCGTACGTCGGCGCTCTTAGAGAAATTAAAGTCTTTGGGCTCCGGGGGTAGTATGGTCGCAAGTCTGAAACTTGAAGGAATTGACGGAAGGGCACCACAAGGCGTGGATGTTGCGGCTTAATTTGACTCAACACGGGAAAGCTTACTAGGTTTGGACACCTTTGTGATGGACAGATTGAAGCTCTTACCCTACTGCGTGGATGGTGGTGCATGGTCGTTCTCAGCCCGTGGGTTGACCTGTCAGGTTTACTCCGGTAACGCGCGAGACCTCGGTCTGCTAAATAGACGTGGCTGTTTCGGCACCCGCGCTCTTCTTAGAGAGAGACTCGACGAGAGTCGAGGGAAGTCGAGGCAATAACAGATCTGTGATGCCCTTAGTTATCCTAGGTCGCACGCGCCATACAATGTGGCGCACAACGAGTCTCCTTGGCCGACAGGATGTCCCGTGCGCGGTCGACGACGCAGCCAGCTCGGTCGTCGGGCAGACTCGGCGAGAGTGGCCCGTCGTCCTGAGTGGGCGGTCG-CCGACGCCGCGGGATTCTGGGCAATCTGGCANAGCGCTACGTGACTGGGCTAGACTTTTGTAATTTTTGGTCTTGAACGAGGAATGCCTAGTAATCGCAGGTCAGCATCCTGCGATGATTCGGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCATCCG-TGGCATGCGCCGGTGAAGAGGGGGAGGCAGCGTCGGCCGGGTAACACCAG-TCGTACGTGGAACCCCTCTGAACCTTCGCACGTAGAGGAAGGAGAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AATGC-------GAATT---C--G-G---AGGCG-TCGAAGCCCTCA----GA-G--G--GCGA--CGCCGGAGTGTGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCCTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCTGCA--AGAGCGCTCTCCCCTC-GACGGC-GGAGAGGCGGCAGTGGACGCGACACCCG----ACCGAC--G---TCGGCGTGTCCGTGCCAGCGC-GCCGGTCGCCGCAGCTC-GG--TCGAAGGACCTG-A-GCG----ACGGACGGCAGT---CTGA--AAC--GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_cuneata_4_SOC252_AF525595 GCTCGTAGTTGGACTTCTGGCGACCGCGCTCGGTCCGCCGTGCGCGAGCACTGTCCGCGGTCGTCGTCTCTGTCGACGTGGCGCGTCGGACTTCATTGGCCGGTGCGTCGTCTGTCGGCGATGTTACTTTGAGGAAATCAGAGTGCTCAAAGCAAGCGATCGCTCGTGACTTCACTAGCATGGAATAACACAGATGGGCTCTTTCTCGCACTGTTGGTCTGCGTCAATTGAGCAACGATCGATAGAGACGGTCGGGGGCATTCGTATTGCGCAGTTAGAGGTGAAATTCTCCGATCTGCGCAAGACGCACTAATGCGAAAGCAGTTGCCAAGGACGTCCTCTTATGATCAAGAGCGAAAGTCGGGGGATCAAAGATGATTAGATACCGTCGTAGTCCCGACCATAAATGATGCCGACTGAGCTTCGGCGACTCGACCTCAGGTCGTACGTCGGCGCTCTTAGAGAAATTAAAGTCTTTGGGCTCCGGGGGTAGTATGGTCGCAAGTCTGAAACTTGAAGGAATTGACGGAAGGGCATCACAAGGCGTGGATGTTGCGGCTTAATTTGACTCAACACGGGAAAGCTTACTAGGTTTGGACACCTTTGTGATGGACAGATTGAAGCTCTTACCCTACTGCGTGGATGGTGGTGCATGGTCGTTCTCAGCCCGTGGGTTGACCTGTCAGGTTTACTCCGGTAACGCGCGAGACCTCGGTCTGCTAAATAGACGTGGCTGTCTCGGCACCCGCGCTCTTCTTAGAGAGAGACTCGACGAGAGTCGAGGGAAGTCGAGGCAATAACAGATCTGTGATGCCCTTAGTTATCCTAGGTCGCACGCGCCATACAATGTGGCGCACAACGAGTCTCCTTGGCCGACAGGATGCCCCGCGCGCGGTCGACGACGCAGCCAGCTCGGTCGTCGGGCAGACTCGGCGAGAGTGGCCCGTCTTCCTGAGTGGGCGGTCG-CCGACGCCGCGGGATTCTGGGCAATCTGGCAGAGCGCTACGTGACTGGGCTAGACTTTTGTAATTTTTGGTCTTGAACGAGGAATGCCTAGTAATCGCAGGTCAGCATCCTGCGATGATTCGGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCATCCG-TGGCATGCGCCGGTGAAGAGGGGGAGGCAGCGTCGGCCGGGTAACACCGG-TCGTACGTGGAACCCCTCTGAACCTTCGCACGTAGAGGAAGGAGAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACGC-------GAATT---C--G-G---AGGCG-TCGAGGCCCTCT----GC-G--G--GCGA--CGCCGGAGTGAGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCTGCA--CCAGCGCTCTCCCCTC-GACGGC-GGAGAGGCGGCAGTGGACGCGACACCCG----ACCGAC--G---TCGGCGTGTCCGTGCCAGCGC-GCCGGTCGCCGCAGCTC-GG--TCGAAGGACCTG-A-GCG----ACGGACGGCAGT---C-GA--AAC--GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_cuneata_7_H0500_AF823837 GCTCGTAGTTGGACTTCTGGCGACCGCGCTCGGTCCGCCATGCGCGAGCACTGTCCGCGGTCGTCGTCTCTGTCGACGTGGCGCACCGGACTTCACTGGCCGGCGCGTCGTCTGTCGGCGATGTTACTTTGAGGAAATCAGAGTGCTCAAAGCAAGCGTTCGCTCGTGACTTCACTAGCATGGAATAACACAGATGGGCTCTTTCTCGCACTGTTGGTCTGCGTCAATTGAGCAACGATCGATAGAGACGGTCGGGGGCATTCGTATTGCGCAGTTAGAGGTGAAATTCTCCGATCTGCGCAAGACGCACTAATGCGAAAGCAGTTGCCAAGGACGTCCTCTTATGATCAAGAGCGAAAGTCGGGGGATCAAAGATGATTAGATACCGTCGTAGTCCCGACCATAAATGATGCCGACTGAGCTTCGGCGACTCGACCACAGGTCGTACGTCGGCGCTCTTAGAGAAATTAAAGTCTTTGGGCTCCGGGGGTACTATGGTCGCAAGTCTGAAACTTGAAGGAATTGACGGAAGGGCACCACAAGGCGTGGATGTTGCGGCTTAATTTGACTCAACACGGGAAAGCTTACTAGGTTTGGACACCTTTGTGATGGACAGATTGAAGCTCTTACCCTACTGCGTGGATGGTGGTGCATGGTCGTTCTCAGCCCGTGGGTTGACCTGTCAGGTTTACTCCGGTAACGCGCGAGACCTCGGTCTGCTAAATAGACGCGGCTGTCTCGGCACCCGCGCTCTTCTTAGAGAGAGACTCGACGAGAGTCGAGGGAAGTCGAGGCAATAACAGATCTGTGATGCCCTTAGTTATCCTAGGTCGCACGCGCCATACAATGTGGCGCACAACGAGTCTCCTTGGCCGACAGGATGCCCCGCGTGCGGTCGGCGATGCGGCCC-CTCGGTCGTCGGGCAGACTCGGCGAGAGTGGCCCGTCCTCCTGAGCGGGCGGTCG-GCGACGCCGCGGGATTCTGGGCAATCTGGCAGAGCGCTACGTGACTGGGCTAGACTTTTGTAATTTTTGGTCTTGAACGAGGAATGCCTAGTAATCGCAGGTCAGCATCCTGCGATGATTCGGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCATCCG-TGGCATGCGCCGGTGAAGAGGGGGAGGCAGCGTCGGCCGGGTGAAACCGGATCGTACGTGGAACCCCTCTGAACCTTCGCACGTAGAGGAAGGAGAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGAAAGGATCATTACCGGCACATCCC---------CAACAC-C-----G--CT---CG-GA----AGGCG-TCCG--CCCCTCG-TCGG-GCAG--GCGA--CGCCGGAGTCTCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCCGCA-GGCCGCGCTCTCCCCCTCG-TCGC-GGAGAGGCAGCAGTGGACGCGGCACCCG----ACCG-CG-GG--TCGGCGTGCCCGTACCGGCGCTCCCCGTC{AG}CCGCCGCTC-GG--TCGAAGGGCCAGCG-GCGCGAGGCGCACCACGTT---C-GA--GAC--GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_cuneata_undulata GCTCGTAGTTGGACTTCTGGCGACCGCGCTCGGTCCGCCGCGTGCGAGCACTGTCCGCGGTCGTCGTCTCTGTCGACGTGGCGCGTCGGACTTGATTGGCCGGTGCGTCGTCTGTCGGCGATGTTACTTTGAGGAAATCAGAGTGCTCAAAGCAAGCGATCGCTCGTGACTTCACTAGCATGGAATAACACAGATGGGCTCTTTCTCGCACTGTTGGTCTGCGTCAATTGAGCAACGATCGATAGAGACGGTCGGGGGCATTCGTATTGCGCAGTTAGAGGTGAAATTCTCCGATCTGCGCAAGACGCACTAATGCGAAAGCAGTTGCCAAGGACGTCCTCTTATGATCAAGAGCGAAAGTCGGGGGATCAAAGATGATTAGATACCGTCGTAGTCCCGACCATAAATGATGCCGACTGAGCTTCGGCGACTCGACCTCAGGTCGTACGTCGGCGCTCTTAGAGAAATTAAAGTCTTTGGGCTCCGGGGGTAGTATGGTCGCAAGTCTGAAACTTGAAGGAATTGACGGAAGGGCACCACAAGGCGTGGATGTTGCGGCTTAATTTGACTCAACACGGGAAAGCTTACTAGGTTTGGACACCTTTGTGATGGACAGATTGAAGCTCTTACCCTACTGCGTGGATGGTGGTGCATGGTCGTTCTCAGCCCGTGGGTTGACCTGTCAGGTTTACTCCGGTAACGCGCGAGACCTCGGTCTGCTAAATAGACGCGGCTGTTCCGGCACCCGCGCTCTTCTTAGAGAGAGACTCGACGAGAGTCGAGGGAAGTCGAGGCAATAACAGATCTGTGATGCCCTTAGTTATCCTAGGTCGCACGCGCCATACAATGTGGCGCACAACGAGTCTCCTTGGCCGACAGGATGCCCCGCACGCGGTCGACGACGCTGCGCGCTCGGTCGTCGGGCAGACTCGGCGAGAGTGGTCCGTCCTCCTGAGCGGGCGGTCG-CCGACGCCGCGGGGTTCTGGGCAATCTGGCAGAGCGCTACGTGACTGGGCTAGACTTTTGTAATTTTTGGTCTTGAACGAGGAATGCCTAGTAATCGCAGGTCAGCATCCTGCGATGATTCGGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCATCCG-TGGCATGCGCCGGTGAAGAGGGGGAGGCAGCGTCGGCCGGGTAACACCGG-TCGTACGTGGAACCTCTCTGAACCTTCGCACGTAGAGGAAGGAGAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCCA{GT}CGAGAGAGAACGC-C-----GCATT---C--GTGCGGAGGCG-TC-G--CA--------GA----G-AACGA--CGCCGCAGTCTCGGAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTCCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCCGCG--CCAGCGCTCTCCCTTC-GACGGC-GGAGAGGCGACGGTGGACGAGGCACCCGACCGACNGAC--GTCGTCGGCGTGTCCGTGCCAGCGC-GACTGTCGACGCCGCTC-GG--TCCAAGCGCC-GAACGCG----GCGGACGACGCT---C-GT--A-C--GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_discoidea_1_OMII118_AF823839 GCTCGTAGTTGGACTTCTGGCGACCGCGCTCGGTCCGCCGTGCGCGAGCACTGTCCGCGGTCGTCGTCTCTGTCGACGTGGCGCGTCGGACTTCATTGGCCGGTGCGTCGTCTGTCGGCGATGTTACTTTGAGGAAATCAGAGTGCTCAAAGCAAGCGATCGCTCGTGACTTCACTAGCATGGAATAACACAGATGGGCTCTTTCTCGCACTGTTGGTCTGCGTCAATTGAGCAACGATCGATAGAGACGGTCGGGGGCATTCGTATTGCGCAGTTAGAGGTGAAATTCTCCGATCTGCGCAAGACGCACTAATGCGAAAGCAGTTGCCAAGGACGTCCTCTTATGATCAAGAGCGAAAGTCGGGGGATCAAAGATGATTAGATACCGTCGTAGTCCCGACCATAAATGATGCCGACTGAGCTTCGGCGACTCGACCTCAGGTCGTACGTCGGCGCTCTTAGAGAAATTAAAGTCTTTGGGCTCCGGGGGTAGTATGGTCGCAAGTCTGAAACTTGAAGGAATTGACGGAAGGGCACCACAAGGCGTGGATGTTGCGGCTTAATTTGACTCAACACGGGAAAGCTTACTAGGTTTGGACACCTTTGTGATGGACAGATTGAAGCTCTTACCCTACTGCGTGGATGGTGGTGCATGGTCGTTCTCAGCCCGTGGGTTGACCTGTCAGGTTTACTCCGGTAACGCGCGAGACCTCGGTCTGCTAAATAGACGCGGCTGTTCCGGCACCCGCGCTCTTCTTAGAGAGAGACTCGACGAGAGTCGAGGGAAGTCGAGGCAATAACAGATCTGTGATGCCCTTAGTTATCCTAGGTCGCACGCGCCATACAATGTGGCGCACAACGAGTCTCCTTGGCCGACAGGATGTCCCGTGCGCGGTCGACGACGCAGCCGGCTCGGTCGTCGGGCAGACTCGGCGAGAGTGGCCCGTCCTCCTGAGTGGGCGGTCG-CCGACGCCGCGGGATTCTGGGCAATCTGGCAGAGCGCTACGTGACTGGGCTAGACTTTTGTAATTTTTGGTCTTGAACGAGGAATGCCTAGTAATCGCAGGTCAGCATCCTGCGATGATTCGGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCATCCG-TGGCATGCGCCGGTGAAGAGGGGGAGGCAGCGTCGGCCGGGTAACACCGG-TCGTACGTGGAACCCCTCTGAACCTTCGCACGTAGAGGAAGGAGAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACGA-------GAATT---C--GAAC--AGGCG-TCAG--CTCT-------A---GG--GCGA--CGCCGGAGTCTGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGTGGAGGGAGGACGCGTCGGCGACATCGCCCTGCA---CA--GCCCTCGGAC------GA-GGAGAGGCACCAGTGGACGAGGCACCCG----ACGGAC--G---TCGGCGTGTCCGTGCCAGCGC-GCATCTCGCCGTAGCTA-GG--TCGAAGGACCTC-G-GCG----ACGGACGACTGT---C-GA--GA---GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_discoidea_1_SOC299_AF407254 GCTCGTAGTTGGACTTCTGGCGACCGCGCTCGGTCCGCCGTGCGCGAGCACTGTCCGCGGTCGTCGTCTCTGTCGACGTGGCGCGTCGGACTTCATTGGCCGGTGCGTCGTCTGTCGGCGATGTTACTTTGAGGAAATCAGAGTGCTCAAAGCAAGCGATCGCTCGTGACTTCACTAGCATGGAATAACACAGATGGGCTCTTTCTCGCACTGTTGGTCTGCGTCAATTGAGCAACGATCGATAGAGACGGTCGGGGGCATTCGTATTGCGCAGTTAGAGGTGAAATTCTCCGATCTGCGCAAGACGCACTAATGCGAAAGCAGTTGCCAAGGACGTCCTCTTATGATCAAGAGCGAAAGTCGGGGGATCAAAGATGATTAGATACCGTCGTAGTCCCGACCATAAATGATGCCGACTGAGCTTCGGCGACTCGACCTCAGGTCGTACGTCGGCGCTCTTAGAGAAATTAAAGTCTTTGGGCTCCGGGGGTAGTATGGTCGCAAGTCTGAAACTTGAAGGAATTGACGGAAGGGCACCACAAGGCGTGGATGTTGCGGCTTAATTTGACTCAACACGGGAAAGCTTACTAGGTTTGGACACCTTTGTGATGGACAGATTGAAGCTCTTACCCTACTGCGTGGATGGTGGTGCATGGTCGTTCTCAGCCCGTGGGTTGACCTGTCAGGTTTACTCCGGTAACGCGCGAGACCTCGGTCTGCTAAATAGACGCGGCTGTTCCGGCACCCGCGCTCTTCTTAGAGAGAGACTCGACGAGAGTCGAGGGAAGTCGAGGCAATAACAGATCTGTGATGCCCTTAGTTATCCTAGGTCGCACGCGCCATACAATGTGGCGCACAACGAGTCTCCTTGGCCGACAGGATGTCCCGTGCGCGGTCGACGACGCAGCCTGCTCGGTCGTCGGGCAGACTCGGCGAGAGTGGCCCGTCCTCCTGAGTGGGCGGTCG-CCGACGCCGCGGGATTCTGGGCAATCTGGCAGAGCGCTACGTGACTGGGCTAGACTTTTGTAATTTTTGGTCTTGAACGAGGAATGCCTAGTAATCGCAGGTCAGCATCCTGCGATGATTCGGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCATCCG-TGGCATGCGCCGGTGAAGAGGGGGAGGCAGCGTCGGCCGGGTAACACCGG-TCGTACGTGGAACCCCTCTGAACCTTCGCACGTAGAGGAAGGAGAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC---------AAAGA--------GAATT---C--GAAC--AGGCG-TCAG--CGCTAC----------G--GCGA--CGCCGGAGT-TGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGAAGATA-GAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGTGGAGGGAGGACGCGTCGGCGACATCGCCCTGCA---CA--GCCCTCGGAC------GA-CGAGAGGCGGCAGTGGACGAGGCACCCG----GCAGAC--G---TCGGCGTGTCCGTGCCAGCAC-GCACGTCACCGCAGCTCTGG--TCGAAGGACCTG-A-GCG----ACGGACGACTGT---C-GA--AG---GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATTAGCGG Halimeda_discoidea_2_H0207_AF407249 GCTCGTAGTTGGACTTCTGGCGACCGCGCTCGGTCCGCCAAGCGCGAGTACTGTCCGCGGTCGTCGTCTCTGTCGACGTGGCGCACCGGACTTCACTGGCCGGCGCGTCGTCTGTCGGCGATGTTACTTTGAGGAAATCAGAGTGCTCAAAGCAAGCGTTCGCTCGTGACTTCACTAGCATGGAATAACACAGATGGGCTCTTTCTCGCACTGTTGGTCTGCGTCAATTGAGCAACGATCGATAGAGACGGTCGGGGGCATTCGTATTGCGCAGTTAGAGGTGAAATTCTCCGATCTGCGCAAGACGCACTAATGCGAAAGCAGTTGCCAAGGACGTCCTCTTATGATCAAGAGCGAAAGTCGGGGGATCAAAGATGATTAGATACCGTCGTAGTCCCGACCATAAATGATGCCGACTGAGCTTCGGCGACTCGACCACAGGTCGTACGTCGGCGCTCTTAGAGAAATTAAAGTCTTTGGGCTCCGGGGGTAGTATGGTCGCAAGTCTGAAACTTGAAGGAATTGACGGAAGGGCACCACAAGGCGTGGATGTTGCGGCTTAATTTGACTCAACACGGGAAAGCTTACTAGGTTTGGACACCTTTGTGATGGACAGATTGAAGCTCTTACCCTACTGCGTGGATGGTGGTGCATGGTCGTTCTCAGCCCGTGGGTTGACCTGTCAGGTTTACTCCGGTAACGCGCGAGACCTCGGTCTGCTAAATAGACGCGGCTGTTTCGGCACCCGCGCTCTTCTTAGAGAGAGACTCGACGAGAGTCGAGGGAAGTCGAGGCAATAACAGATCTGTGATGCCCTTAGTTATCCTAGGTCGCACGCGCCATACAATGTGGCGCACAACGAGTCTCCTTGGCCGACAGGATGCCCCGCGCGCGGTCGGCGACGCAGCCC-CTCGGTCGTCGGGCAGACTCGGTGAGAGTGGCCCGTCCTCCTGAACGGGCGGTCG-CCGACGCCGCGGGATTCTGGGCAATCTGGCAGAGCGCTACGTGACTGGGCTAGACTTTTGTAATTTTTGGTCTTGAACGAGGAATGCCTAGTAATCGCAGGTCAGCATCCTGCGATGATTCGGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCATCCG-TGGCATGCGCCGGTGAAGAGGGGGAGGCAGCGTCGGCTGGGTAACTCCAGATCGTACGTGGAACCCCTCTGAACCTTCGCACGTAGAGGAAGGAGAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACAC-T-----G--TCAAATGTGAA---AGGCG-TCCG--CCCTGCGCTCG---CAG--GGAA--CGCCGGAGTTTCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCTGCACATCAGCGCTCTCCCCTC-G-TCGC-GGAGAGGCAGCGGTGGACGCGGCACCCG----ACTGCCC-G---TCTGCGTGCCCGTGCCAGCTCTCGCCGTCGCCGCCGCTC-GG--TCGAATGACCCGCA-GCGG-ACGCGGAC-AC--A---C--AGAGAC--GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_discoidea_3_HV396 GCTCGTAGTTGGACTTCTGGCGACCGCGCTCGGTCCGCCAAGCGCGAGTACTGTCCGCGGTCGTCGTCTCTGTCGACGTGGCGCGCCGGACTTCACTGGCCGGTGCGTCGTCTGTCGGCGATGTTACTTTGAGGAAATCAGAGTGCTCAAAGCAAGCGTTCGCTCGTGACTTCACTAGCATGGAATAACACAGATGGGCTCTTTCTCGCACTGTTGGTCTGCGTCAATTGAGCAACGATCGATAGAGACGGTCGGGGGCATTCGTATTGCGCAGTTAGAGGTGAAATTCTCCGATCTGCGCAAGACGCACTAATGCGAAAGCAGTTGCCAAGGACGTCCTCTTATGATCAAGAGCGAAAGTCGGGGGATCAAAGATGATTAGATACCGTCGTAGTCCCGACCATAAATGATGCCGACTGAGCTTCGGCGACTCGACCACAGGTCGTACGTCGGCGCTCTTAGAGAAATTAAAGTCTTTGGGCTCCGGGGGTAGTATGGTCGCAAGTCTGAAACTTGAAGGAATTGACGGAAGGGCACCACAAGGCGTGGATGTTGCGGCTTAATTTGACTCAACACGGGAAAGCTTACTAGGTTTGGACACCTTTGTGATGGACAGATTGAAGCTCTTACCCTACTGCGTGGATGGTGGTGCATGGTCGTTCTCAGCCCGTGGGTTGACCTGTCAGGTTTACTCCGGTAACGCGCGAGACCTCGGTCTGCTAAATAGACGCGGCTGTTTCGGCACCCGCGCTCTTCTTAGAGAGAGACTCGACGAGAGTCGAGGGAAGTCGAGGCAATAACAGATCTGTGATGCCCTTAGTTATCCTAGGTCGCACGCGCCATACAATGTGGCGCACAACGAGTCTCCTTGGCCGACAGGATGCCCCGTGTGCGGTCGGCGATGCAGCCC-CTCGGTCGTCGGGCAGACTCGGCGAGAGTGGCCCGTCTTCCTGAGAGGGCGGTCG-CCGACGCCGCGGGATTCTGGGCAATCTGGCAGAGCGCTACGTGACTGGGCTAGACTTTTGTAATTTTTGGTCTTGAACGAGGAATGCCTAGTAATCGCAGGTCAGCATCCTGCGATGATTCGGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCATCCG-TGGCATGCGCCGGTGAAGAGGGGGAAGCAGCGTCNGCTGGGTAATACTGGACCGTACGTGGAACCCCTCTGAACCTTCGCACGTAAAGAAAGGAGAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Halimeda_gracilis GCTCGTAGTTGGACTTCTGGCGACCGCGTTCGGTCCGCCAAGCGCGAGCACTGTCCGCGGTCGTCGTTTCTGTCGACGTGGCGCGTCGGACTTCATTGGCCGGCGCGTNGTCTGTCGGCGATGTTACTTTGAGGAAATCAGAGTGCTCAAGGCAAGCGTTCGCTCGTGACTTCACTANCATGGAATAACACAGATGGGCTCTTTCTCGCACTGTTGGTCTGCGTCAATTGAGCAACGATCGATAGAGACGGTCGGGGGCATTCGTATTGCGCAGTTAGAGGTGAAATTCTCCGATCTGCGCAAGACGTACTAATGCGAAAGCAGTTGCCAAGGACGTCCTCTTATGATCAAGAGCGAAAGTCGGGGGATCAAAGATGATTAGATACCGTCGTAGTCCCGACCATAAATGATGCCGACTGAGCTTCGGCGACTCGACCACAGGTCGTACGTCGGCGCTCTTAGAGAAATTAAAGTCTTTGGGCTCCGGGGGTAGTATGGTCGCAAGTCTGAAACTTGAAGGAATTGACGGAAGGGCACCACAAGGCGTGGATGTTGCGGNTTAATTTGACTCAACACGGGAAAGCTTACTAGGTTTGGACACCTTTGTGATGGACAGATTGAAGCTCTTACCCTACTGCGTGGATGGTGGTGCATGGTCGTTCTCAGCCCGTGGGTTGACCTGTCAGGTTTACTCCGGTAACGCGCGAGACCTCGGTCTGCTAAATAGACGTGGCTGTTTCGGCACCCGCGCTCTTCTTAGAGAGAGACTCGACGAGAGTCGAGGGAAGTCGAGGCAATAACAGATCTGTGATGCCCTTAGTTATCCTAGGTCGCACGCGCCATACAATGTGGCGCACAACGAGTCTCCTTGGCCGACAGGATGTCCCGTTGGCGGTCGGCGAGTTGGCCTGCTCGGTCTTCGGGCAGACTCGGCGAGAGTGGCCCGTCCTCCTGTGCGGGCGGCCG-TCGACGCCTCGGGTTTCTGGGCAATCTGGCAGAGCGCTACGTGACTGGTCTAGACTTTTGTAATTTTTGGTCTTGAACGAGGAATGCCTAGTAATCGCAGGTCAGCATCCTGCGATGATTCGGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCATCCG-TGGCATGCGCCGGTGAAGAGGGGGAGGCAGCGTCGGCCGGGTAACACCGGATCGTACGTGGAACCCCTCTGAACCTTCGCACGTAGAGGAAGGAGAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------TATTCTC-----GAACT---C--AAAC--AGGCGCTCAG--CCCT-T----G-----G--GCGA--CGCTGCAGTATCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCTGGCGGAGGGAGGACNCGTCGG{CG}NACATCGCCCCGNA--CCACCGCTCTCCCACC--ACCGAGGGAAAGGCGGCAGTGGACGGAGCACCCG------------GA---CGGCGTGTCCGTTCCCGCTCGCNCAGTCGCTCCGNGT--GGCCTCNACANACCNGNG-GNCCNACTCGACCGAAANA-----NA--ANC-CGTNGCNATGCCGTCGGCNAGGAAACCCGTTGAACTTAANCNNATNATTAANCGG Halimeda_hummii GCTCGTAGTTGGACTTCTGGCGACCGCGCTCGGTCCGCCGTGCGCGAGCACTGTCCGCGGTCGTCGTCTCTGTCGACGTGGCGCGCCGGACTTCACTGGCCGGCGCGTCGTCTGTCGGCGACGTTACTTTGAGGAAATCAGAGTGCTCAAAGCAAGCGTTCGCTCGTGACTTCACTAGCATGGAATAACACAGATGGGCTCTTTCTCGCACCGTTGGTCTGCGTCAATTGAGCAACGATCGATAGAGACGGTCGGGGGCATTCGTATTGCGCAGTTAGAGGTGAAATTCTCCGATCTGCGCAAGACGCACTAATGCGAAAGCAGTTGCCAAGGACGTCCTCTTATGATCAAGAGCGAAAGTCGGGGGATCAAAGATGATTAGATACCGTCGTAGTCCCGACCATAAATGATGCCGACTGAGCTTCGGCGACTCGACCACAGGTCGTACGTCGGCGCTCTTAGAGAAATTAAAGTCTTTGGGCTCCGGGGGTAGTATGGTCGCAAGTCTGAAACTTGAAGGAATTGACGGAAGGGCAACACAAGGCGTGGATGTTGCGGCTTAATTTGACTCAACACGGGAAAGCTTACTAGGTTTGGACACCTTTGTGATGGACAGATTGAAGCTCTTACCCTACTGCGTGGATGGTGGTGCATGGTCGTTCTCAGCCCGTGGGTTGACCTGTCAGGTTTACTCCGGTAACGCGCGAGACCTCGGTCTGCTAAATAGACGCGGCTGTCTCGGCACCCGCGCTCTTCTTAGAGAGAGACTCGACGAGAGTCGAGGGAAGTCGAGGCAATAACAGATCTGTGATGCCCTTAGTTATCCTAGGTCGCACGCGCCATACAATGTGGCGCACAACGAGTCTCCTTGGCCGACAGGATGTCCCGCGAGCGGTCGGCGACGCAGCCCGCTCGGTCGTCGGGCAGACTCGGTGAGAGTGGCCCGTCTTCCTGAGCGGGCGGTCG-TCGACGTCGAGGGATTCTGGGCAATCTGGCAGAGCGCTACGTGACTGGGCTAGACTTTTGTAATTTTTGGTCTTGAACGAGGAATGCCTAGTAATCGCAGGTCAGCATCTTGCGATGATTCGGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCATCCG-TGGCATGCGCCGTTGAAGAGGGGGAGGCAGCGTCGGCCGTGTAACACCGGATCGTACGTGGAACCCCTCTGAACCTTCGCACGTAGAGGAAGGAGAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC------GACCGACACACA----G--TC--CC--GAA---AGGCG-TC-G--CCCCTC---CGA--GGG--GCGGG-CGCCGGAGTCTCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCCTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCCGCA-AGCAGCGCTCTCCCCCTCG-TCGC-GGAGAGGCCG{AC}GGTGGACGAGGCACCCG----ACTGACC-G---TCGGCGTGCCCGTGCAGGCGCCCCGCGTCGCCGCCGCCA-GG--TCGAAGGGCCGGCG-GTCGGAGGCGAGC-ACGTT---C-GAAAGAC--GCCGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_lacunalis GCTCGTAGTTGGACTTCTGGCGACCGCGCTCGGTCCGCCAAGCGCGAGCACTGTCCGCGGTCGTCGTCTCTGTCGACGTGGCGCGCCGGACTTCACTGGCCGGTGCGTCGTCTGTCGGCGATGTTACTTTGAGGAAATCAGAGTGCTCAAAGCAAGCGATCGCTCGTGACTTCACTAGCATGGAATAACACAGATGGGCTCTTTCTCGCACTGTTGGTCTGCGTCAATTGAGCAACGATCGATAGAGACGGTCGGGGGCATTCGTATTGCGCAGTTAGAGGTGAAATTCTCCGATCTGCGCAAGACGCACTAATGCGAAAGCAGTTGCCAAGGACGTCCTCTTATGATCAAGAGCGAAAGTCGGGGGATCAAAGATGATTAGATACCGTCGTAGTCCCGACCATAAATGATGCCGACTGAGCTTCGGCGACTCGACCACAGGTCGTACGTCGGCGCTCTTAGAGAAATTAAAGTCTTTGGGCTCCGGGGGTAGTATGGTCGCAAGTCTGAAACTTGAAGGAATTGACGGAAGGGCACCACAAGGCGTGGATGTTGCGGCTTAATTTGACTCAACACGGGAAAGCTTACTAGGTTTGGACACCTTTGTGATGGACAGATTGAAGCTCTTACCCTACTGCGTGGATGGTGGTGCATGGTCGTTCTCAGCCCGTGGGTTGACCTGTCAGGTTTACTCCGGTAACGCGCGAGACCTCGGTCTGCTAAATAGACGCGGCTGTCACGGCACCCGCGCTCTTCTTAGAGAGAGACTCGACGAGAGTCGAGGGAAGTCGAGGCAATAACAGATCTGTGATGCCCTTAGTTATCCTAGGTCGCACGCGCCATACAATGTGGCGCACAACGAGTCTCCTTGGCCGACAGGATGTCCCGTGCGCGGTCGGCGACGCAGCC-TCTCGGTCGTCGGGCAGACTCGGAGAGAGTGGCCCGTCGTCCTGAGCGGGCGGTCGGTCGACGCC{GT}CGGGATTCTGGGCAATCTGGCAGAGCGCTACGTGACTGGGCTAGACTTTTGTAATTTTTGGTCTTGAACGAGGAATGCCTAGTAATCGCAGGTCAGCATCCTGCGATGATTCGGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCATCCGGTGGCATGCGCCGGTGAAGAGGGGGAGGCAACGTCGGCCGGGTAACACCGTATCGTACGTGGAACCCCTCTGAACCTTCGCACGTAGAGGAAGGAGAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACACACACATCG--TT---C--GAA---AGGCG--C-G--CCTCTT---------GG--GCGA--CGCCGGAGCTTAGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCTTCGCCCTCGGGCGTGGGGAGGACGCGTCGGCGACATCGCCCTGTG-TGCAGCGCTCTCCTCCTTGATCTC-GGAGAGGCGGCAGTGGACG-GACACCCG----TCGGACAGG---TCGGCGTGCCCGTTGAAGAGCTGCCCGTCGACGTCGCTC-GG--TCGAAGGACCGTCG-GCG----AGAGAC-GCA-T---C-GAAAGGTAAGTTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_macrophysa GCTCGTAGTTGGACTTCTGGCGACCGCGCTCGGTCCGCCGTGTGCGAGCACTGTCCGCGGTCGTCGTCTCTGTCGACGTGGCGCGTCGGACTTCGTTGGCCGGTGCGTCGTCTGTCGGCGATGTTACTTTGAGGAAATCAGAGTGCTCAAAGCAAGCGATCGCTCGTGACTTCACTAGCATGGAATAACACAGATGGGCTCTTTCTCGCACTGTTGGTCTGCGTCAATTGAGCAACGATCGATAGAGACGGTCGGGGGCATTCGTATTGCGCAGTTAGAGGTGAAATTCTCCGATCTGCGCAAGACGCACTAATGCGAAAGCAGTTGCCAAGGACGTCCTCTTATGATCAAGAGCGAAAGTCGGGGGATCAAAGATGATTAGATACCGTCGTAGTCCCGACCATAAATGATGCCGACTGAGCTTCGGCGACTCGACCTCAGGTCGTACGTCGGCGCTCTTAGAGAAATTAAAGTCTTTGGGCTCCGGGGGTAGTATGGTCGCAAGTCTGAAACTTGAAGGAATTGACGGAAGGGCACCACAAGGCGTGGATGTTGCGGCTTAATTTGACTCAACACGGGAAAGCTTACTAGGTTTGGACACCTTTGTGATGGACAGATTGAAGCTCTTACCCTACTGCGTGGATGGTGGTGCATGGTCGTTCTCAGCCCGTGGGTTGACCTGTCAGGTTTACTCCGGTAACGCGCGAGACCTCGGTCTGCTAAATAGACGCGGCTGTCTCGGCACCCGCGCTCTTCTTAGAGAGAGACTCGACGAGAGTCGAGGGAAGTCGAGGCAATAACAGATCTGTGATGCCCTTAGTTATCCTAGGTCGCACGCGCCATACAATGTGGCGCACAACGAGTTTCCTTGGCCGACAGGATGCCCCTCGCGCGGTCGGCGACGCAGCCCTCTCGGTCGTCGGGCAGACTCGGCGAGAGTGGTCCGTCCTCCTGAGCGGGCGGTCG-TCGACGCCGTGGGGTTCTGGGCAATCTGGCAGAGCGCTACGTGACTGGGCTAGACTTTTGTAATTTTTGGTCTTGAACGAGGAATGCCTAGTAATCGCAGGTCAGCATCCTGCGATGATTCGGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCATCCG-TGGCATGCGCCGGTGAAGAGGGGGAGGCAGCGTCGGCCGGGTAACACCGG-TCGTACGTGGAACCCCTCTGAACCTTCGCACGTAGAGGAAGGAGAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AANNNNN-----N--TT---C--GAA---AGGCG-TC-G--ACTTCT---C-A--GAG--GCGA--CGCCGGAGTCTCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAA{GT}GACGTAG{CT}GA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCTGC{AG}--CCAGCGCTCTCCC-TC-GATCGC-GGAGAGGC{CT}GCGGTGGACGCGACACCCG----AC{CT}G-TT-GAAGTCGGCGTGTCCGTGCGAGCGC-GACTGTCGACGC{CT}GCCC-TG--TCCAAGAAC--GAG-G{CT}G----GCGGACGACGCTGAAC-GA--AAC--GCCGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_magnidisca GCTCGTAGTTGGACTTCTGGCGACCGCGCTCGGTCCGCCGTGCGCGAGCACTGTCCGCGGTCGTCGTCTCTGTCGACGTGGCGCGTCGGACTTCATTGGCCGGTGCGTCGTCTGTCGGCGATGTTACTTTGAGGAAATCAGAGTGCTCAAAGCAAGCGATCGCTCGTGACTTCACTAGCATGGAATAACACAGATGGGCTCTTTCTCGCACTGTTGGTCTGCGTCAATTGAGCAACGATCGATAGAGACGGTCGGGGGCATTCGTATTGCGCAGTTAGAGGTGAAATTCTCCGATCTGCGCAAGACGCACTAATGCGAAAGCAGTTGCCAAGGACGTCCTCTTATGATCAAGAGCGAAAGTCGGGGGATCAAAGATGATTAGATACCGTCGTAGTCCCGACCATAAATGATGCCGACTGAGCTTCGGCGACTCGACCTCAGGTCGTACGTCGGCGCTCTTAGAGAAATTAAAGTCTTTGGGCTCCGGGGGTAGTATGGTCGCAAGTCTGAAACTTGAAGGAATTGACGGAAGGGCACCACAAGGCGTGGATGTTGCGGCTTAATTTGACTCAACACGGGAAAGCTTACTAGGTTTGGACACCTTTGTGATGGACAGATTGAAGCTCTTACCCTACTGCGTGGATGGTGGTGCATGGTCGTTCTCAGCCCGTGGGTTGACCTGTCAGGTTTACTCCGGTAACGCGCGAGACCTCGGTCTGCTAAATAGACGTGGCTGTC{AT}CGGCACCCGCGCTCTTCTTAGAGAGAGACTCGACGAGAGTCGAGGGAAGTCGAGGCAATAACAGATCTGTGATGCCCTTAGTTATCCTAGGTCGCACGCGCCATACAATGTGGCGCACAACGAGTCTCCTTGGCCGACAGGATGCCCCGTGCGCGGTCGACGACGCAGCGAGCTCGGTC{GT}TCGGGCAGACTCGG{CT}GAGAGTGGCCCGTCCTCCTGAGCGGGCGGTCG-CCGACGCCGCGGGATTCTGGGCAATCTGGCAGAGCGCTACGTGACTGGGCTAGACTTTTGTAATTTTTGGTCTTGAACGAGGAATGCCTAGTAATCGCAGGTCAGCATCCTGCGATGATTCGGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCATCCG-TGGCATGCGCCGGTGAAGAGGGGGAGGCAGCGTCGGCCGGGTAACACCGG-TCGTACGTGGAACCCCTCTGAACCTTCGCACGTAGAGGAAGGAGAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AATGC-------GAATT---C--GAAC--AGGCG-TCCACGCC{CT}TCC----GA-G--G--GCGA--CGCCGAAGTCTGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCTGCA--CCAGCGCTCTCCCCTC-GACGGC-GGAGAGGCGGCAGTGGACGCGACACCCG----ACCGAC--G---TCGGCGTGTCCGTGCCAGCGC-GCCGGTCGCCGCAGCTC-GG--TCGAAGGACCTG-A-GCG----ACGGACGGCAGT---C-GA--AAC--GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_taenicola GCTCGTAGTTGGACTCCTGGCGACCGCGCTCGGTCCGCCGCGTGCGAGCACTGTCCGCGGTCGTCGTCTCTGTCGACGTGGCGCACCGGACTTGATTGGCCGGCGCGTCGTCTGTCGGCGATGTTACTTTGAGGAAATCAGAGTGCTCAAAGCAAGCGATCGCTCGTGACTTCACTAGCATGGAATAACACAGATGGGCTCTTTCTCGCACTGTTGGTCTGCGTCAATTGAGCAACGATCGATAGAGACGGTCGGGGGCATTCGTATTGCGCAGTTAGAGGTGAAATTCTCCGATCTGCGCAAGACGCACTAATGCGAAAGCAGTTGCCAAGGACGTCCTCTTATGATCAAGAGCGAAAGTCGGGGGATCAAAGATGATTAGATACCGTCGTAGTCCCGACCATAAATGATGCCGACTGAGCTTCGGCGACTCGACCTCTGGTCGTGTGTCGGCGCTCTTAGAGAAATTAAAGTCTTTGGGCTCCGGGGGTAGTATGGTCGCAAGTCTGAAACTTGAAGGAATTGACGGAAGGGCACCACAAGGCGTGGATGTTGCGGCTTAATTTGACTCAACACGGGAAAGCTTACTAGGTTTGGACACCTTTGTGATGGACAGATTGAAGCTCTTACCCTACTGCGTGGATGGTGGTGCATGGTCGTTCTCAGCCCGTGGGTTGACCTGTCAGGTTTACTCCGGTAACGCGCGAGACCTCGGTCTGCTAAATAGACGTGGCTGTTCCGGCACCCGCGCTCTTCTTAGAGAGAGACTCGACGAGAGTCGAGGGAAGTCGAGGCAATAACAGATCTGTGATGCCCTTAGTTATCCTAGGTCGCACGCGCCATACAATGTGGCGCACAACGAGTCTCCTTGGCCGACAGGATGCCCCGCGCGCGGTCGACGACGCGGCTCGCTCGGTCGTCGGGCAGACTCGGCGAGAGTGGCCCGTCCTCCTGAGTGGGCGGTCG-CCGACGCCGCGGGATTCTGGGCAATCTGGCAGAGCGCTACGTGACTGGGCTAGACTTTTGTAATTTTTGGTCTTGAACGAGGAATGCCTAGTAATCGCAGGTCAGCATCCTGCGATGATTCGGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCATCCG-TGGCATGCGCCGGTGAAGAGGGGGAGGCAGCGTCGGCCGGGTAACACCGG-TCGTACGTGGAACCCCTCTGAACCTTCGCACGTAGAGGAAGGAGAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACGA-------GGACT---CTCGAAC--AGGC-CTCGGCGCCCTCT----GA-GGCG--GCGAGACGCCGGAGT-TGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGNCCTGCG--CCAGCGCTCTCCCCTC-GATCGC-GGAGAGGCGGCAGTGGACGCTGCACCCG----ACGGAC--G---TCGGCGTGCGCGTGCCAGCGC-GCCAGTCGCCACCGCTC-GG--TCGAAGGACC-GCG-GCG----ACGGACGACGGAA----GA--AATACGGTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_tuna_1_H0231_AF407248 GCTCGTAGTTGGACTTCTGGCGACCGCGCTCGGTCCGCCTTGCGCGAGCACTGTCCGCGGTCGTCGTCTCTGTCGACGTGGCGCGCCGGACTTCACTGGCCGGCGCGTCGTCTGTCGGCGATGTTACTTTGAGGAAATCAGAGTGCTCAAAGCAAGCGTTCGCTCGTGACTTCACTAGCATGGAATAACACAGATGGGCTCTTTCTCGCACTGTTGGTCTGCGTCAATTGAGCAACGATCGATAGAGACGGTCGGGGGCATTCGTATTGCGCAGTTAGAGGTGAAATTCTCCGATCTGCGCAAGACGCACTAATGCGAAAGCAGTTGCCAAGGACGTCCTCTTATGATCAAGAGCGAAAGTCGGGGGATCAAAGATGATTAGATACCGTCGTAGTCCCGACCATAAATGATGCCGACTGAGCTTCGGCGACTCGACCACAGGTCGTACGTCGGCGCTCTTAGAGAAATTAAAGTCTTTGGGCTCCGGGGGTAGTATGGTCGCAAGTCTGAAACTTGAAGGAATTGACGGAAGGGCACCACAAGGCGTGGATGTTGCGGCTTAATTTGACTCAACACGGGAAAGCTTACTAGGTTTGGACACCTTTGTGATGGACAGATTGAAGCTCTTACCCTACTGCGTGGATGGTGGTGCATGGTCGTTCTCAGCCCGTGGGTTGACCTGTCAGGTTTACTCCGGTAACGCGCGAGACCTCGGTCTGCTAAATAGACGCGGCTGTCTCGGCACCCGCGCTCTTCTTAGAGAGAGACTCGACGAGAGTCGAGGGAAGTCCAGGCAATAACAGATCTGTGATGCCCTTAGTTATCCTAGGTCGCACGCGCCATACAATGTGGCGCACAACGAGTCTCCTTGGCCGACAGGATGCCCCGCGCGCGGTCGGCGACGCAGCCC-CTCGGTCGTCGGGCAGACTCGGCGAGAGTGGCCCGTCCTCCTGAGCGGGCGGCCG-TCGGCGCCGCGGGATTCTGGGCAATCTGGCAGAGCGCTACGTGACTGGGCTAGACTTTTGTAATTTTTGGTCTTGAACGAGGAATGCCTAGTAATCGCAGGTCAGCATCCTGCGATGATTCGGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCATCCG-TGGCATGCGCCGGTGAAGAGGGGGAGGCAGCGTCCGCCGGGTAACACCGGATCCTACGTGGAACCCCTCTGAACCTTCGCACGTAGAGGAAGGAGAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC---------AAACAA-CA----G--TT--TC--AAAG--AGGCG-TCTG--CCTTCT---CGA--GAG--GCGA--CGCCGGAGTCTCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCCGCT-AG-AGCGCTCTCCCCCTCG-TCGC-GGAGAGGCCGCAGTGGACGAGGCAACCG----AC-GTCG-G---TCGGCGTGCCCGTGACGTCGCTCCACTTCGCCGCCGCTC-GG--TCGAAGGGCCGGCG-GTCGGAGGCGAAC-ACGTA---C-GAAAGAC--GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_tuna_2_H0113_AF407250 GCTCGTAGNTGGACTTCTGGCGACTGCGCTCGGTCCGCCATGCGCGAGCACTGTCCGCGGTCGTCGTTTCTGTCGACGTGGCGCGCCGGACTTCACTGGCCGGCGCGTCGTCTGTCGGCGATGTTACTTTGAGGAAATCAGAGTGCTCAAAGCAAGCGTTCGCTCGTGACTTCACTAGCATGGAATAACACAGATGGGCTCTTTCTCGCACTGTTGGTCTGCGTCAATTGAGCAACGATCGATAGAGACGGTCGGGGGCATTCGTATTGCGCAGTTAGAGGTGAAATTCTCCGATCTGCGCAAGACGCACTAATGCGAAAGCAGTTGCCAAGGACGTCCTCTTATGATCAAGAGCGAAAGTCGGGGGATCAAAGATGATTAGATACCGTCGTAGTCCCGACCATAAATGATGCCGACTGAGCTTCGGCGACTCGACCCCAGGTCGTACGTCGGCGCTCTTAGAGAAATTAAAGTCTTTGGGCTCCGGGGGTAGTATGGTCGCAAGTCTGAAACTTGAAGGAATTGACGGAAGGGCACCACAAGGCGTGGATGTTGCGGCTTAATTTGACTCAACACGGGAAAGCTTACTAGGTTTGGACACCTTTGTGATGGACAGATTGAAGCTCTTACCCTACTGCGTGGATGGTGGTGCATGGTCGTTCTCAGCCCGTGGGTTGACCTGTCAGGTTTACTCCGGTAACGCGCGAGACCTCGGTCTGCTAAATAGACGCGGCTGTCACGGCACCCGCGCTCTTCTTAGAGAGAGACTCGACGAGAGTCGAGGGAAGTCGAGGCAATAACAGATCTGTGATGCCCTTAGTTATCCTAGGTCGCACGCGCCATACAATGTGGCGCACAACGAGTCTCCTTGGCCGACAGGATG{CT}CCCGCGCGCG{AG}TCGGCGACGCAGCCC-CTCGGTC{GT}TCGGGCAGACTCGG{CT}GAGAGTGGCCCGTCCTCCTGAACGGGCG{AG}TCGGTCGA{CT}GCCGCGGGATTCTGGGCAATCTGGCAGAGCGCTACGTGACTGGGCTAGACTTTTGTAATTTTTGGTCTTGAACGAGGAATGCCTAGTAATCGCAGGTCAGCATCCTGCGATGATTCGGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCATCCG-TGGCATGCGCCGGTGAAGAGGGGGAGGCAGCGTCGGCCGGGTAACACCGGATCGTACGTGGAACCCCTCTGAACCTTCGCACGTAGAGGAAGGAGAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACAC-T-----G--TTGTCC-TGA----AGGCG-TCAG--CCCTCTCCTCGGAGCGGCGGCGA--CGCCGGAGTCTCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCCTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCTGCG-AG-AGCGCTCTCCCCCCAT-TCGC-GGAGAGGCCGCAGTGGACNAGGCACCCG----ACCGATT-G---TCGGCGTGCACGTGACAGCGCTGCCCGCCGTCGCCGCTC-GG--TCGAAGGACCCGCG-GCGGCAGGCGAACGATTG----C-GA--ACT--GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = 'SSU-ITS') = N: 1-1756; CODONPOSSET CodonPositions (CHARACTERS = 'SSU-ITS') = N: 1-1756; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M1040] TITLE 'rps19-rps3'; LINK TAXA = Taxa2; DIMENSIONS NCHAR=660; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=N GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Halimeda_cuneata_1_KZN2K4_21_AY823860 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAGCACTGATAAA------AAATTCAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCCTTAGGGTTTCGAGTAGGTATCACCCAACCTCATTTATCACACTGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATCATTTTGTAAGAACTGTATTATCAGAAAAATATACTAGAGCACGATTTGAAAAAATTCAAATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATATTCTGATTGGGAAAAAAGGT------------------GAAAATTTAAAAATTTTTCAAAAACAAATTAAAACATTTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATATCGGTGTAAAACGAGTGCATCATCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAGACGCATTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTGAAAAGAAAAAAACAATCAACT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_cuneata_1_KZN2K4_41_AY823861 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAGCACTGATAAA------AAATTCAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCCTTAGGGTTTCGAGTAGGTATCACCCAACCTCATTTATCACACTGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATCATTTTGTAAGAACTGTATTATCAGAAAAATATACTAGAGCACGATTTGAAAAAATTCAAATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATATTCTGATTGGGAAAAAAGGT------------------GAAAATTTAAAAATTTTTCAAAAACAAATTAAAACATTTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATATCGGTGTAAAACGAGTGCATCATCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAGACGCATTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTGAAAAGAAAAAAACAATCAACT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_cuneata_1_KZNb2263_AY823862 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAGCACTGATAAA------AAATTCAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCCTTAGGGTTTCGAGTAGGTATCACCCAACCTCATTTATCACACTGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATCATTTTGTAAGAACTGTATTATCAGAAAAATATACTAGAGCACGATTTGAAAAAATTCAAATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATATTCTGATTGGGAAAAAAGGT------------------GAAAATTTAAAAATTTTTCAAAAACAAATTAAAACATTTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATATCGGTGTAAAACGAGTGCATCATCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAGACGCATTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTGAAAAGAAAAAAACAATCAACT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_cuneata_2_H0195_2_AY823863 GGTGAGTTTTCACCTACACGTTATTTTCGAGGTCATAAAAAAACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTTCATCCTTTGGGATTTCGATTAGGTATCACACAACCTTATTTATCTAACTGGTATGCTTCCAAAAAAGATTATTCAAAATATGTCTTGGAAGATCATTTAGTCAGAACTCTATTATTCAAAAAATATAATCGAGCCAAATTTGACAAAATTACAATTTTTCGTAATATAGAAGATCATATTGAAATTTTTATATATGCTCAAAAACCTGAGATTCTTCTTGGGACAACAGGT------------------------GCACGACAGTTACAAAAACAAATAAAAACATCGATTTTTCAACATCGAAAAAGG------AACTCAAAATTGAAAGTTATATTATCTATATTTTGCTGTAAAATTAATGCATCATCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAGACGCATTCCATATAAAGTTGTTTTAACTTTATTAAAAAAATATTTAAAAAGAAACAAACCT---------------------------------------TTAGGAATGAAAGTGAAAATTTCTGGC Halimeda_cuneata_2_KZN2K4_20_AY823864 GGTGAGTTTTCACCTACACGTTATTTTCGAGGTCATAAAAAAACTGATAAA------AAATTTAAACGT---------------CGTCGT------------TAA------ATGGGACAAAAAGTTCATCCTTTGGGATTTCGATTAGGTATCACACAACCTTATTTATCTAACTGGTATGCTTCCAAAAAAGATTATTCAAAATATGTCTTGGAAGATCATTTAATCAGAACTCTATTATTCAAAAAATATAATCGAGCCAAATTTGACAAAATTACAATTTTTCGTAATATAGAAGATCATGTTGAAATTTTTATATATGCTCAAAAACCTGAAATTCTTCTTGGGACAACAGGT------------------------GCACGACAGTTACAAAAACAAATAAAAACATCGATTTTTCAACATCGAAAAAGG------AACTCAAGATTGAAAGTTATATTATCTATATTTTGCTGTAAAATTAATGCATCATCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAGACGCATTCCATATAAAGTTGTTTTAACTTTATTAAAAAAATATTTAAAAAGAAACAAACCT---------------------------------------TTAGGAATGAAAGTGAAAATTTCTGGC Halimeda_cuneata_2_KZNb2352_AY823865 GGTGAGTTTTCACCTACACGTTATTTTCGAGGTCATAAAAAAACTGATAAA------AAATTTAAACGT---------------CGTCGT------------TAA------ATGGGACAAAAAGTTCATCCTTTGGGATTTCGATTAGGTATCACACAACCTTATTTATCTAACTGGTATGCTTCCAAAAAAGATTATTCAAAATATGTCTTGGAAGATCATTTAATCAGAACTCTATTATTCAAAAAATATAATCGAGCCAAATTTGACAAAATTACAATTTTTCGTAATATAGAAGATCATGTTGAAATTTTTATATATGCTCAAAAACCTGAAATTCTTCTTGGGACAACAGGT------------------------GCACGACAGTTACAAAAACAAATAAAAACATCGATTTTTCAACATCGAAAAAGG------AACTCAAGATTGAAAGTTATATTATCTATATTTTGCTGTAAAATTAATGCATCATCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAGACGCATTCCATATAAAGTTGTTTTAACTTTATTAAAAAAATATTTAAAAAGAAACAAACCT---------------------------------------TTAGGAATGAAAGTGAAAATTTCTGGC Halimeda_cuneata_3_H0210_AY823866 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCCTTGGGGTTTCGATTAGGGATCACACAACCTCATTTATCAAACTGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATAATTTTGTAAGAACTCTATTGTCAGAAAAATATAATAGAGCACGATTTGAAAAAATTCACATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATATTTTGATTAAAGGTGAA---------------------------------AATTTACAAAAACAAATTAAAACATTTCTTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCAGTGTAAAACCAGTGCCTCAGCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAACGCATTCCATATAAAGTTGTTTTGAATTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCCACT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_cuneata_3_H0550_AY823867 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCCTTGGGGTTTCGATTAGGGATCACACAACCTCATTTATCAAACTGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATAATTTTGTAAGAACTCTATTGTCAGAAAAATATAATAGAGCACGATTTGAAAAAATTCACATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATATTTTGATTAAAGGTGAA---------------------------------AATTTACAAAAACAAATTAAAACATTTCTTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCAGTGTAAAACCAGTGCCTCAGCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAACGCATTCCATATAAAGTTGTTTTGAATTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCCACT---------------------------------TTAGGAATGAAAATTCNAATTTCTGGC Halimeda_cuneata_3_H0551_AY823868 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCCTTGGGGTTTCGATTAGGGATCACACAACCTCATTTATCAAACTGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATAATTTTGTAAGAACTCTATTGTCAGAAAAATATAATAGAGCACGATTTGAAAAAATTCACATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATATTTTGATTAAAGGTGAA---------------------------------AATTTACAAAAACAAATTAAAACATTTCTTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCAGTGTAAAACCAGTGCCTCAGCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAACGCATTCCATATAAAGTTGTTTTGAATTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCCACT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_cuneata_3_WA182_AY823869 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCCTTGGGGTTTCGATTAGGGATCACACAACCTCATTTATCAAACTGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATAATTTTGTAAGAACTCTATTGTCAGAAAAATATAATAGAGCACGATTTGAAAAAATTCACATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATATTTTGATTAAAGGTGAA---------------------------------AATTTACAAAAACAAATTAAAACATTTCTTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCAGTGTAAAACCAGTGCCTCAGCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAACGCATTCCATATAAAGTTGTTTTGAATTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCCACT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_cuneata_3_WA206_AY823870 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCCTTGGGGTTTCGATTAGGGATCACACAACCTCATTTATCAAACTGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATAATTTTGTAAGAACTCTATTGTCAGAAAAATATAATAGAGCACGATTTGAAAAAATTCACATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATATTTTGATTAAAGGTGAA---------------------------------AATTTACAAAAACAAATTAAAACATTTCTTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCAGTGTAAAACCAGTGCCTCAGCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAACGCATTCCATATAAAGTTGTTTTGAATTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCCACT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_cuneata_4_SOC212b_AY823871 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCCTTGGGGTTTCGATTAGGGATCACACAACCGCATTTATCAAACTGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATAATTTTGTAAGAACTTTTTTGTCAGAAAAATATAGTAGAGCACGATTTGAAAAAATTCATATTTCTCGTAAAATAGAAGATCATCTTGAAATCGTCATCTATGCTCAAAAACCTGATATTTTGATTGGGAAAAAAGGT------------------------GTAAAAAATTTTCAAAAACAAATCAAAACATCTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCAGTGTAAACCTAGTGCATCCTCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAGCGCATTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTGAAAAGAACAAAACAATCCACT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_cuneata_4_SOC252_AY823872 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCCTTGGGGTTTCGATTAGGGATCACACAACCGCATTTATCAAACTGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATAATTTTGTAAGAACTTTTTTGTCAGAAAAATATAGTAGAGCACGATTTGAAAAAATTCATATTTCTCGTAAAATAGAAGATCATCTTGAAATCGTCATCTATGCTCAAAAACCTGATATTTTGATTGGGAAAAAAGGT------------------------GTAAAAAATTTTCAAAAACAAATCAAAACATCTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCAGTGTAAACCTAGTGCATCCTCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAGCGCATTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTGAAAAGAACAAAACAATCCACT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_cuneata_4_SOC348_AY823873 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCCTTGGGGTTTCGATTAGGGATCACACAACCGCATTTATCAAACTGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATAATTTTGTAAGAACTTTTTTGTCAGAAAAATATAGTAGAGCACGATTTGAAAAAATTCATATTTCTCGTAAAATAGAAGATCATCTTGAAATCGTCATCTATGCTCAAAAACCTGATATTTTGATTGGGAAAAAAGGT------------------------GTAAAAAATTTTCAAAAACAAATCAAAACATCTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCAGTGTAAACCTAGNGCATCCTCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAGCGCATTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTGAAAAGAACAAAACAATCCACT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_cuneata_7_H0500_AY823881 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTCAACGAATTCAACGAAAACGCCGT---------------TAA------ATGGGACAAAAAGTACATCCATTAGGGTTTCGATTAGGTATTACTCAACCTCATTTGTCACAATGGTATGCTTCCAAAAGAGATTATTCAAAATATGTATTGGAAGATAATTTTGTAAGAACACTCTTATCAAAAAAGTATAAAAGAGCAAAATTTGAAAAAATTCACATTTCTCGTAAAATAGAAGATCACCTAGAAATTGTGATTCATGCTCAAAAACCTGATATTTTGATTGGAAAAAAAAGT------------------GAAAATTTACAAACTTTTCAACAACAAATTAAAAAAGCGATTTTTCAATATCGGCAAATTGCCTGGAACTCACAATTGAAAGTGATATTCTATATATTTCGCTGTAAAATCAACGCATCTTCT---ATTGCTGATTTTATTGTAGAACATTTAGAAAAACGCGTTCCATATAAAGTGGTGTTCGTTTTATTAAAAAAACATTTACAAAGACAAAGATACTCACCT---------------------------------TTAGGAATGAAAATTCAGATTTCTGGC Halimeda_cuneata_7_H0501_AY823882 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTCAACGAATTCAACGAAAACGCCGT---------------TAA------ATGGGACAAAAAGTACATCCATTAGGGTTTCGATTAGGTATTACTCAACCTCATTTGTCACAATGGTATGCTTCCAAAAGAGATTATTCAAAATATGTATTGGAAGATAATTTTGTAAGAACACTCTTATCAAAAAAGTATAAAAGAGCAAAATTTGAAAAAATTCACATTTCTCGTAAAATAGAAGATCACCTAGAAATTGTGATTCATGCTCAAAAACCTGATATTTTGATTGGAAAAAAAAGT------------------GAAAATTTACAAACTTTTCAACAACAAATTAAAAAAGCGATTTTTCAATATCGGCAAATTGCCTGGAACTCACAATTGAAAGTGATATTCTATATATTTCGCTGTAAAATCAACGCATCTTCT---ATTGCTGATTTTATTGTAGAACATTTAGAAAAACGCGTTCCATATAAAGTGGTGTTCGTTTTATTAAAAAAACATTTACAAAGACAAAGATACTCACCT---------------------------------TTAGGAATGAAAATTCAGATTTCTGGC Halimeda_cuneata_7_H0502_AY823883 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTCAACGAATTCAACGAAAACGCCGT---------------TAA------ATGGGACAAAAAGTACATCCATTAGGGTTTCGATTAGGTATTACTCAACCTCATTTGTCACAATGGTATGCTTCCAAAAGAGATTATTCAAAATATGTATTGGAAGATAATTTTGTAAGAACACTCTTATCAAAAAAGTATAAAAGAGCAAAATTTGAAAAAATTCACATTTCTCGTAAAATAGAAGATCACCTAGAAATTGTGATTCATGCTCAAAAACCTGATATTTTGATTGGAAAAAAAAGT------------------GAAAATTTACAAACTTTTCAACAACAAATTAAAAAAGCGATTTTTCAATATCGGCAAATTGCCTGGAACTCACAATTGAAAGTGATATTCTATATATTTCGCTGTAAAATCAACGCATCTTCT---ATTGCTGATTTTATTGTAGAACATTTAGAAAAACGCGTTCCATATAAAGTGGTGTTCGTTTTATTAAAAAAACATTTACAAAGACAAAGATACTCACCT---------------------------------TTAGGAATGAAAATTCAGATTTCTGGC Halimeda_cuneata_f_digitata_HV605_AY823874 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTCAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTGCATCCTTTGGGGTTTAGATTAGGTATTACACAACCTCATTTATCAAACTGGTATGCTTCCAAAAAAGATTATTCAAAATATGTCTTGGAAGATAATTTTGTAAGAACTTTATTGTCAAAAAAATATAATAGAGCACGATTTGAAAAAATTCAAATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATATTTTGATTGGGAGAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAACATTTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCAATTGCTGATTTTATTGTTGAACATCTGGAAAAACGAATTCCCTATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAACT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_cuneata_f_digitata_HV732_AY823875 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTCAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTGCATCCTTTGGGGTTTAGATTAGGTATTACACAACCTCATTTATCAAACTGGTATGCTTCCAAAAAAGATTATTCAAAATATGTCTTGGAAGATAATTTTGTAAGAACTTTATTGTCAAAAAAATATAATAGAGCACGATTTGAAAAAATTCAAATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATATTTTGATTGGGAGAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAACATTTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCAATTGCTGATTTTATTGTTGAACATCTGGAAAAACGAATTCCCTATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAACT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_cuneata_f_digitata_HV827_AY823876 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTCAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTGCATCCTTTGGGGTTTAGATTAGGTATTACACAACCTCATTTATCAAACTGGTATGCTTCCAAAAAAGATTATTCAAAATATGTCTTGGAAGATAATTTTGTAAGAACTTTATTGTCAAAAAAATATAATAGAGCACGATTTGAAAAAATTCAAATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATATTTTGATTGGGAGAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAACATTTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCAATTGCTGATTTTATTGTTGAACATCTGGAAAAACGAATTCCCTATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAACT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_cuneata_f_undulata_H0122_AY823877 GGTGAGTTTGCACCTACACGTTCTTTTCGAGGTCATAAAAATACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCTTTGGGGTTTCGATTAGGTATTACACAACCTCATTTATCACAATGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATCATTTTGTAAGAACTCTATTGTCACAAAAATATAATAGAGCACGATTTGAAAAAATTCATATTTCCCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATCTTCTGATCGGCAAAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAAAATTTATTTTTCAATATCGACAAATTGAATGGAATTCAAGACTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAACGAGTTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAATT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_cuneata_f_undulata_HV33_AM049983 GGTGAGTTTGCACCTACACGTTCTTTTCGAGGTCATAAAAATACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCTTTGGGGTTTCGATTAGGTATTACACAACCTCATTTATCACAATGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATCATTTTGTAAGAACTCTATTGTCACAAAAATATAATAGAGCACGATTTGAAAAAATTCATATTTCCCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATCTTCTGATCGGCAAAAAAGGT------------------GAAAATTTAGAAATTTTCCAAAAACAAATTAAAAAATTTATTTTTCAATATCGACAAATTGAATGGAATTCAAGACTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAACGAGTTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAATT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_cuneata_f_undulata_HV41_AM049984 GGTGAGTTTGCACCTACACGTTCTTTTCGAGGTCATAAAAATACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCTTTGGGGTTTCGATTAGGTATTACACAACCTCATTTATCACAATGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATCATTTTGTAAGAACTCTATTGTCACAAAAATATAATAGAGCACGATTTGAAAAAATTCATATTTCCCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATCTTCTGATCGGCAAAAAAGGT------------------GAAAATTTAGAAATTTTCCAAAAACAAATTAAAAAATTTATTTTTCAATATCGACAAATTGAATGGAATTCAAGACTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAACGAGTTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAATT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_cuneata_f_undulata_HV560_AY823878 GGTGAGTTTGCACCTACACGTTCTTTTCGAGGTCATAAAAATACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCTTTGGGGTTTCGATTAGGTATTACACAACCTCATTTATCACAATGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATCATTTTGTAAGAACTCTATTGTCACAAAAATATAATAGAGCACGATTTGAAAAAATTCATATTTCCCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATCTTCTGATCGGCAAAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAAAATTTATTTTTCAATATCGACAAATTGAATGGAATTCAAGACTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAACGAGTTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAATT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_cuneata_f_undulata_HV586_AY823879 GGTGAGTTTGCACCTACACGTTCTTTTCGAGGTCATAAAAATACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCTTTGGGGTTTCGATTAGGTATTACACAACCTCATTTATCACAATGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATCATTTTGTAAGAACTCTATTGTCACAAAAATATAATAGAGCACGATTTGAAAAAATTCATATTTCCCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATCTTCTGATCGGCAAAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAAAATTTATTTTTCAATATCGACAAATTGAATGGAATTCAAGACTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAACGAGTTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAATT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_cuneata_f_undulata_HV683_AY823880 GGTGAGTTTGCACCTACACGTTCTTTTCGAGGTCATAAAAATACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCTTTGGGGTTTCGATTAGGTATTACACAACCTCATTTATCACAATGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATCATTTTGTAAGAACTCTATTGTCACAAAAATATAATAGAGCACGATTTGAAAAAATTCATATTTCCCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATCTTCTGATCGGCAAAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAAAATTTATTTTTCAATATCGACAAATTGAATGGAATTCAAGACTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAACGAGTTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAATT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_discoidea_1_H0041_AY823887 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTCAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTGCATCCTTTGGGGTTTAGATTAGGTATTACACAACCTCATTTATCAAACTGGTATGCTTCCAAAAAAGATTATTCAAAATATGTCTTGGAAGATAATTTTGTAAGAACTTTATTGTCAAAAAAATATAATAGAGCACGATTTGAAAAAATTCAAATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATATTTTGATTGGGAGAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAACATTTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCAATTGCTGATTTTATTGTTGAACATCTGGAAAAACGAATTCCCTATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAACT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_discoidea_1_H0153_AY823888 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTCAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTGCATCCCTTGGGGTTTAGATTAGGTATTACACAACCTCATTTATCAAACTGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATAATTTTGTAAGAACTTTATTGTCAGAAAAATATAATAGAGCACGATTTGAAAAAATTCAAATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTGATCTATGCTCAAAAACCTGATATTTTGATTGGGAAAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAACATTTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCAATTGCTGATTTTATTGTTGAACATCTGGAAAAACGAATTCCCTATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAACT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_discoidea_1_HV58_AM049985 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTCAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTGCATCCTTTGGGGTTTAGATTAGGTATTACACAACCTCATTTATCAAACTGGTATGCTTCCAAAAAAGATTATTCAAAATATGTCTTGGAAGATAATTTTGTAAGAACTTTATTGTCAAAAAAATATAATAGAGCACGATTTGAAAAAATTCAAATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATATTTTGATTGGGAGAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAACATTTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCAATTGCTGATTTTATTGTTGAACATCTGGAAAAACGAATTCCCTATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAACT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_discoidea_1_MAS153_AY823884 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTCAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTGCATCCCTTGGGGTTTAGATTAGGTATTACACAACCTCATTTATCAAACTGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATAATTTTGTAAGAACTTTATTGTCAGAAAAATATAGTAGAGCACGATTTGAAAAAATTCAAATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATATTTTGATTGGGAAAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAACATTTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCAATTGCTGATTTTATTGTTGAACATCTGGAAAAACGAATTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAACT---------------------------------TTAGGAATGAAAATCCAAATTTCTGGC Halimeda_discoidea_1_MAS356_AY823885 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTCAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTGCATCCCTTGGGGTTTAGATTAGGTATTACACAACCTCATTTATCAAACTGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATAATTTTGTAAGAACTTTATTGTCAGAAAAATATAGTAGAGCACGATTTGAAAAAATTCAAATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATATTTTGATTGGGAAAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAACATTTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCAATTGCTGATTTTATTGTTGAACATCTGGAAAAACGAATTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAACT---------------------------------TTAGGAATGAAAATCCAAATTTCTGGC Halimeda_discoidea_1_OMII118_AY823886 GGTGAGTTTGCACCTACACGCTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTCAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTGCATCCCTTGGGGTTTAGATTAGGTATTACACAACCTCATTTATCAAACTGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATAATTTTGTAAGAACTTTATTGTCAGAAAAATATAGTAGAGCACGATTTGAAAAAATTCAAATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATATTTTGATTGGGAAAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAACATTTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCAATTGCTGATTTTATTGTTGAACATCTGGAAAAACGAATTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAACT---------------------------------TTAGGAATGAAAATCCAAATTTCTGGC Halimeda_discoidea_1_SOC212a_AY823889 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTCAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTGCATCCCTTGGGGTTTAGATTAGGTATTACACAACCTCATTTATCAAACTGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATAATTTTGTAAGAACTTTATTGTCAGAAAAATATAATAGAGCACGATTTGAAAAAATTCAAATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATATTTTGATTGGGAAAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAACATTTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCAATTGCAGATTTTATTGTTGAACATCTGGAAAAACGAATTCCCTATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAACT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_discoidea_1_SOC299_AY823890 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTCAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTGCATCCCTTGGGGTTTAGATTAGGTATTACACAACCTCATTTATCAAACTGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATAATTTTGTAAGAACTTTATTGTCAGAAAAATATAATAGAGCACGATTTGAAAAAATTCAAATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTGATCCATGCTCAAAAACCTGATATTTTGATTGGGAAAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAACATTTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCAATTGCAGATTTTATTGTTGAACATCTGGAAAAACGAATTCCCTATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAACT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_discoidea_2_H0144_AY823891 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACACCCATTAGGGTTTCGATTAGGTATTACACAACCTCATTTATCACAATGGTATGCTTCCAAAAGATATTATTCAAAATATGTATTGGAAGATCATTTTGTGAGAACAATATTGTCAGAAAAATATAAAAGAGCAAAATTTGAAAAAATTCACATTTCTCGTAAAATAGAAGATCACCTCGAAATAGTGATCCATGCTCAAAAACCTGATATTTTGATTGGAAAAAAAAGT------------------GAAACTCTAAAGAGTTTCCAAAAACAAATTAAAAAATACATTTTTCAATATCGGCAAATTGAATGGAACTCAAAACTTAAAGTTATTGTATATATATTTCGATGTAAAATTCATGCATCTTCT---ATTGCTGATTTTATTGTAGAACATCTGGAAAAACGAGTTCCATATAAAGTTGTCTTCGTTTTATTAAAAAAACATTTGCAAAGACAAAAACACTCAGCT---------------------------------TTAGGAATGAAAATACAAATTTCTGGC Halimeda_discoidea_2_H0207_AY823892 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACACCCATTAGGGTTTCGATTAGGTATTACACAACCTCATTTATCACAATGGTATGCTTCCAAAAGATATTATTCAAAATATGTATTGGAAGATCATTTTGTGAGAACAATATTGTCAGAAAAATATAAAAGAGCAAAATTTGAAAAAATTCACATTTCTCGTAAAATAGAAGATCACCTCGAAATAGTGATCCATGCTCAAAAACCTGATATTTTGATTGGAAAAAAAAGT------------------GAAACTCTAAAGAGTTTCCAAAAACAAATTAAAAAATACATTTTTCAATATCGGCAAATTGAATGGAACTCAAAACTTAAAGTTATTATATATATATTTCGATGTAAAATTCATGCATCTTCT---ATTGCTGATTTTATTGTAGAACATCTGGAAAAACGAGTTCCATATAAAGTTGTCTTCGTTTTATTAAAAAAACATTTGCAAAGACAAAAACACTCAGCT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_discoidea_2_H0209_AY823893 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACACCCATTAGGGTTTCGATTAGGTATTACACAACCTCATTTATCACAATGGTATGCTTCCAAAAGATATTATTNNAAATATGTATTGGAAGATCATTTTGTGAGAACAATATTGTCAGAAAAATATAAAAGAGCAAAATTTGAAAAAATTCACATTTCTCGTAAAATAGAAGATCACCTCGAAATAGTGATCCATGCTCAAAAACCTGATATTTTGATTGGAAAAAAAAGT------------------GAAACTCTAAAGAGTTTCCAAAAACAAATTAAAAAATACATTTTTCAATATCGGCAAATTGAATGGAACTCAAAACTTNNAGTTATTGTATATATATTTCGATGTAAAATTCATGCATCTTCT---ATTGCTGATTTTATTGTAGAACATCTGGAAAAACGAGTTCCATATAAAGTTGTCTTCGTTTTATTAAAAAAACATTTGCAAAGACAAAAACACTCAGCT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_discoidea_2_HV495_AY823894 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACACCCATTAGGGTTTCGATTAGGTATTACACAACCTCATTTATCACAATGGTATGCTTCCAAAAGATATTATTCAAAATATGTATTGGAAGATCATTTTGTGAGAACAATATTGTCAGAAAAATATAAAAGAGCAAAATTTGAAAAAATTCACATTTCTCGTAAAATAGAAGATCATCTCGAAATAGTGATCCATGCTCAAAAACCTGATATTTTGATTGGAAAAAAAAGT------------------GAAACTCTAAAGAGTTTCCAAAAACAAATTAAAAAATACATTTTTCAATATCGGCAAATTGAATGGAACTCAAAACTTAAAGTTATTGTATATATATTTCGATCTAAAATTCATGCATCTTCT---ATTGCTGATTTTATTGTAGAACATCTGGAAAAACGAGTTCCCTATAAAGTTGTCTTCGTTTTATTAAAAAAACATTTGCAAAGACAAAAACACTCAGCT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_discoidea_3_HV396_AY823895 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAGAAAGTACATCCATTAGGATTTCGATTAGGTATTACACAACCTCATTTATCACAATGGTATGCTTCCAAAAAATATTATTCCAAATATATATTGGAAGATCATTTTGTGAGAACAATATTGTCAGAAAAATATAAAAGAGCAAAATTTGTAAAAATTCACATTTCTCGTAAAATAGAAGATCATTTCGAAATAGTGATCCATGCTCAAAAACCTGAGATTTTGATTGGAAAAAAAAGT------------------GAAACTCTAAAGAATTTCCAAAAACAAATTAAAAAATTCATTTTTCAATATCGGCAAATTGAATGGAACTCAAAACTTAAAGTTATTGTATATATATTTCGATGTAAAATTCATGCATCTTCT---ATTGCTGATTTTATTGTAGAACATCTGGAAAAACGAGTTCCATATAAAGTTGTGTTCGTTTTATTAAAAAAACATTTGCAAAGACAAAAACACTCAGCT---------------------------------TTAGGAATGAAAATCCAAATTTCTGGC Halimeda_discoidea_3_HV431_AY823896 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAGAAAGTACATCCATTAGGATTTCGATTAGGTATTACACAACCTCATTTATCACAATGGTATGCTTCCAAAAAATATTATTCCAAATATATATTGGAAGATCATTTTGTGAGAACAATATTGTCAGAAAAATATAAAAGAGCAAAATTTGTAAAAATTCACATTTCTCGTAAAATAGAAGATCATTTCGAAATAGTGATCCATGCTCAAAAACCTGAGATTTTGATTGGAAAAAAAAGT------------------GAAACTCTAAAGAATTTCCAAAAACAAATTAAAAAATTCATTTTTCAATATCGGCAAATTGAATGGAACTCAAAACTTAAAGTTATTGTATATATATTTCGATGTAAAATTCATGCATCTTCT---ATTGCTGATTTTATTGTAGAACATCTGGAAAAACGAGTTCCATATAAAGTTGTGTTCGTTTTATTAAAAAAACATTTGCAAAGACAAAAACACTCAGCT---------------------------------TTAGGAATGAAAATCCAAATTTCTGGC Halimeda_gracilis GGTGAGTTTTCGCCAACACGTTATTTTCGAGGACATAAAACTACTGATAAA------AAATCTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCGTTGGGGTTTCGTTTAGGTATAACACAGCCTCATTTATCACAATGGTATGCTTCCAAAAAATATTATTCAAAATATGTATTGGAAGACAATTTTTTAAGAACAATATTACAAAAAAAATATAGTAGAGCAGGATTTGAAAAAATTGAAATTTCTCGTAAAGTAGAAAATCATATTGAAATCGTCATTCACGCTCAAAAACCTGATATTTTGATTGGAAAAAAAGGT------------------GAAAATTTAGAACTATTTCAAAAAGAAATAAAA---------------------------CATTTTAATACTAAAAAAAAAGTTATATTATATGTTCGTCGATGTAAAACGAGTGCATCCTCG---ATAGCTGATTTTATTGTACAAAATATCGAAAAACGAGTTCCATATAAACTGATATTCATTTTATTAAAAAAACATTTTAAAATTGAT---------------------------------------------TTTGGAATGAAAATTCAAATTTCTGGC Halimeda_hummii GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTCAACGTAAAAGTAAAGGTAAAGGTAAAAAGAAAACGTCATAAATAAATATGGGACAAAAAGTACATCCGTTGGGGTTTCGATTAGGTATCACACAACCTCATTTATCACAATGGTATGCTTCCAAAAGACATTATTCAAAATATGTATTGGAAGATAATTTTGTAAGAACAATATTGTCAGAAAAATATAAAAGAGCCAAATTTGAAAAAATTCAAATTTCTCGTAAAATAGAAGATCATCTCGAAATAGTGATCCACGCCCAAAAACTTGATATTCTGATTGGAAAGAAAAGT------------------GAAAATTTAGAGATTTTTCAAAAACAAATTAAAAAATTCATTTTTCAATATCGGCAAATTGAATGGAATTCAAAACTTAAAGTTATATTATATATCTTTCGATGTAAAAATACTGCATCTTCT---ATTGCTGATTTTATTGTAGAACATCTGGAAAAACGAGTTCCATATAAAGTTGTATTTGGTTTATTAAAAAAACATTTACAAAGACAAAAACACTCAGCT---------------------------------TTAGGAATGAAGGTTCAAATTGCTGGC Halimeda_lacunalis_H0118_AY823897 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTCAAACGTAAAAAAAGT------CGT---------------TAA------ATGGGACAAAAAGTACATCCGTTAGGGTTTCGATTAGGTATCACACAACCTCATTTATCACAATGGTATGCTTCTAAAACAAATTATTCAAAATATGTATTGGAAGATAATTTTATAAGAACAATATTGTCAGAAAAATATAAAAGAGCAAAATTTGTAAAAATTCAAATTTCTCGTAAAATAGAAGATCACCTCGAAATAGTGATCCACGCTCAAAAACCTGATATTTTGATTGGAAAAAAAATTGACAGTCGA---------GAATCTTTAAAAATTTTTCAGAAACAAATTAAGAAATTCATTTTTCAATATCGGGGAATTGAATGGAATTCTAAACTCAAAGTTATATTATATATATTTCGATGTAAAACTAGTGCATCTTCT---ATTGCTGATTTTATTGTAGAACATTTGGAAAAACGCGTTCCATATAAAGTCGTATTTGTTTTATTAAAAAAACATTTACAAAGACAAAAACATTCAGCT---------------------------------TTAGGAATGAAAATTCTCATTTCTGGC Halimeda_lacunalis_H0121_AY823898 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTCAAACGTAAAAAAAGT------CGT---------------TAA------ATGGGACAAAAAGTACATCCGTTAGGGTTTCGATTAGGTATCACACAACCTCATTTATCACAATGGTATGCTTCTAAAACAAATTATTCAAAATATGTATTGGAAGATAATTTTATAAGAACAATATTGTCAGAAAAATATAAAAGAGCAAAATTTGTAAAAATTCAAATTTCTCGTAAAATAGAAGATCACCTCGAAATAGTGATCCACGCTCAAAAACCTGATATTTTGATTGGAAAAAAAATTGACAGTCGA---------GAATCTTTAAAAATTTTTCAGAAACAAATTAAGAAATTCATTTTTCAATATCGGGGAATTGAATGGAATTCTAAACTCAAAGTTATATTATATATATTTCGATGTAAAACTAGTGCATCTTCT---ATTGCTGATTTTATTGTAGAACATTTGGAAAAACGCGTTCCATATAAAGTCGTATTTGTTTTATTAAAAAAACATTTACAAAGACAAAAACATTCAGCT---------------------------------TTAGGAATGAAAATTCTCATTTCTGGC Halimeda_lacunalis_HV306_1_AY823899 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTCAAACGTAAAAAAAGT------CGT---------------TAA------ATGGGACAAAAAGTACATCCGTTAGGGTTTCGATTAGGTATCACACAACCTCATTTATCACAATGGTATGCTTCTAAAACAAATTATTCAAAATATGTATTGGAAGATAATTTTATAAGAACAATATTGTCAGAAAAATATAAAAGAGCAAAATTTGTAAAAATTCAAATTTCTCGTAAAATAGAAAATCACCTCGAAATAGTGATCCACGCTCAAAAACCTGATATTTTGATTGGAAAAAAAATTGACAGTCGA---------GAATCTTTAAAAATTTTTCAGAAACAAATTAAGAAATTCATTTTTCAATATCGGGGAATTGAATGGAATTCTAAACTCAAAGTTATATTATATATATTTCGATGTAAAACTAGTGCATCTTCT---ATTGCTGATTTTATTGTAGAACATTTGGAAAAACGCGTTCCATATAAAGTCGTATTTGTTTTATTAAAAAAACATTTACAAAGACAAAAACATTCAGCT---------------------------------TTAGGAATGAAAATTCTCATTTCTGGC Halimeda_lacunalis_HV308_1_AY823900 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTCAAACGTAAAAAAAGT------CGT---------------TAA------ATGGGACAAAAAGTACATCCGTTAGGGTTTCGATTAGGTATCACACAACCTCATTTATCACAATGGTATGCTTCTAAAACAAATTATTCAAAATATGTATTGGAAGATAATTTTATAAGAACAATATTGTCAGAAAAATATAAAAGAGCAAAATTTGTAAAAATTCAAATTTCTCGTAAAATAGAAAATCACCTCGAAATAGTGATCCACGCTCAAAAACCTGATATTTTGATTGGAAAAAAAATTGACAGTCGA---------GAATCTTTAAAAATTTTTCAGAAACAAATTAAGAAATTCATTTTTCAATATCGGGGAATTGAATGGAATTCTAAACTCAAAGTTATATTATATATATTTCGATGTAAAACTAGTGCATCTTCT---ATTGCTGATTTTATTGTAGAACATTTGGAAAAACGCGTTCCATATAAAGTCGTATTTGTTTTATTAAAAAAACATTTACAAAGACAAAAACATTCAGCT---------------------------------TTAGGAATGAAAATTCTCATTTCTGGC Halimeda_macrophysa_H0271_AM049987 GGTGAGTTTGCACCTACACGTTCTTTTCGGGGTCATAAAAACACTGATAAA------AAATTCAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCTTTGGGGTTTCGATTAGGTATTACACAACCTCATTTATCACAATGGTATGCTTCCAAAAAATACTATTCTAAATATGTCTTGGAAGATAATTTTATAAGAACTCTATTGTCAGAAAAGTATAATAGAGCACGATTTGAAAAAATACACATTTCTCGTAAAATAGAAGATCATATTGAAATAGTGATCTATGCTCAAAAACCTGATCTTCTGATTGGCAAAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAAAATCTATTTTTCAATATCGAGAAATTGAATGGAACTCAAACCTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAACGTATTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAACT---------------------------------TTAGGTATGAAAATTAAAATTTCTGGC Halimeda_magnidisca_HEC12910_AY823901 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCCTTGGGATTTCGATTAGGTATTACACAACCTCATTTATCACATTGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGACCATTTTGTAAGAACTCTATTGTCAGAAAAATATAATAGAGCACGATTTGAGAAAATTCAAATTTCTCGTAAAATCGAAGATCATCTTGAAATAGTGATCTATGCTCAAAAACCTGATATTCTGATTGGTAAAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAACATTTATTTTTCAATATCGACAAATTGAATGGAACTCAAAATTGAAAGTTATATTATATATATTTCAGTGTAAAATGAGTGCGTCATCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAACGAATTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGACAAAAACAATCAACT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_magnidisca_SOC385_AY823902 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCCTTGGGATTTCGATTAGGTATTACACAACCTCATTTATCACATTGGTATGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGACCATTTTGTAAGAACTCTATTGTCAGAAAAATATAATAGAGCACGATTTGAGAAAATTCAAATTTCTCGTAAAATCGAAGATCATCTTGAAATAGTGATCTATGCTCAAAAACCTGATATTCTGATTGGTAAAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAACATTTATTTTTCAATATCGACAAATTGAATGGAACTCAAAATTGAAAGTTATATTATATATATTTCAGTGTAAAATGAGTGCGTCATCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAACGAATTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGACAAAAACAATCAACT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_taenicola_H0037_AY823903 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTCAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCCTTGGGATTTCGATTAGGTATTACACAACCTCATTTATCACAATGGTACGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATTATTTTGTAAGAACTCTATTGTTAGAAAAATATAATAGAGCAGGATTTGAAAAAATTCACATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTAGTTCATGCTCAAAAACCTGATATTTTGATTGGAAAAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAACATTTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAACGAATTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAACT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_taenicola_HV285_1_AY823904 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTCAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCCTTGGGATTTCGATTAGGTATTACACAACCTCATTTATCACAATGGTACGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATTATTTTGTAAGAACTCTATTGTTAGAAAAATATAATAGAGCAGGATTTGAAAAAATTCACATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTAGTTCATGCTCAAAAACCTGATATTTTGATTGGAAAAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAACATTTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAACGAATTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAACT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_taenicola_HV285_2_AY823905 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTCAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCCTTGGGATTTCGATTAGGTATTACACAACCTCATTTATCACAATGGTACGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATTATTTTGTAAGAACTCTATTGTTAGAAAAATATAATAGAGCAGGATTTGAAAAAATTCACATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTAGTTCATGCTCAAAAACCTGATATTTTGATTGGAAAAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAACATTTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAACGAATTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAACT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_taenicola_HV306_3_AY823906 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTCAAACGT---------------CGT---------------TAA------ATGGGACAAAAAGTACATCCCTTGGGATTTCGATTAGGTATTACACAACCTCATTTATCACAATGGTACGCTTCCAAAAAATATTATTCAAAATATGTCTTGGAAGATTATTTTGTAAGAACTCTATTGTTAGAAAAATATAATAGAGCAGGATTTGAAAAAATTCACATTTCTCGTAAAATAGAAGATCATCTTGAAATAGTAGTTCATGCTCAAAAACCTGATATTTTGATTGGAAAAAAAGGT------------------GAAAATTTAGAAATTTTTCAAAAACAAATTAAAACATTTATTTTTCAATATCGACAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATATTTCGGTGTAAAACTAGTGCATCATCTGCTATTGCTGATTTTATTGTTGAACATCTGGAAAAACGAATTCCATATAAAGTTGTTTTTACTTTATTAAAAAAACATTTAAAAAGAAAAAAACAATCAACT---------------------------------TTAGGAATGAAAATTCAAATTTCTGGC Halimeda_tuna_1_H0074_AY823909 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTCAACGTAAACGTAAA------CGT---------------TAA------ATGGGACAAAAAGTACATCCGTTGGGGTTTCGATTAGGTATCACACAACCTCATTTATCACAATGGTATGCTTCCAAACGACATTATTCAAAATATGTATTGGAAGATAATTTTGTAAGAACAATATTGTCAGAAAAATATAAAAGAGCCAAATTTGAAAAAATTAAAATTTCTCGTAAAATAGAAGATCATCTCGAAATAGTGATCCACGCCCAAAAACCTGATATTCTGATTGGAAAAAAAAGT------------------GAGAATTTAGAAGTTTTTCAAAAACAAATTAAAAAATTCATTTTTCAATATCGGCAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATTTTTCGATGTAAAAATACTGCATCTTCT---ATTGCTGATTTTATTGTAGAACATCTAGAAAAACGAGTTCCATATAAAGTTGTATTTGTTTTATTAAAAAAACATTTACAAAGACAAAAACATTCAGCT---------------------------------TTAGGAATGAAAGTTCAAATTGCTGGC Halimeda_tuna_1_H0231_AY823910 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTCAACGTAAACGTAAA------CGTCAT------------TAA------ATGGGACAAAAAGTACATCCGTTGGGGTTTCGATTAGGTATCACACAACCTCATTTATCACAATGGTATGCTTCTAAAAAACATTATTCAAAATATGTATTGGAAGATAATTTTGTAAGAACAATATTGTTAGAAAAATATAAAAGAGCCAAATTTGAAAAAATTCAAATTTCTCGTAAAATAGAAGATCATCTCGAAATAGTGATCCATGCCCAAAAACCTGATATTCTGATTGGTAAAAAAAGT------------------GAGAATTTAGAAGTTTTTCAAAAACAAATTAAAAAATTCATTTTTCAATATCGGCAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATTTTTCGATGTAAAAATACTGCATCTTCT---ATAGCTGATTTTATTGTAGAAAATTTAGAAAAAAGAGTTCCATATAAAGTTGTATTTGTTTTATTAAAAAAACATTTACAAAGACAAAAACACTCAGCT---------------------------------TTAGGAATGAAGGTTCAAATTGCTGGC Halimeda_tuna_1_HV447_AY823911 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTCAACGTAAACGTAAA------CGT---------------TAA------ATGGGACAAAAAGTACATCCGTTGGGGTTTCGATTAGGTATCACACAACCTCATTTATCACAATGGTATGCTTCCAAAAGACATTATTCAAAATATGTATTGGAAGATAATTTTGTAAGAACAATATTGTCAGAAAAATATAAAAGAGCCAAATTTGAAAAAATTAAAATTTCTCGTAAAATAGAAGATCATCTCGAAATAGTGATCCACGCCCAAAAACCTGATATTCTGATTGGTAAAAAAAGT------------------GAGAATTTAGAAGTTTTTCAAAAACAAATTAAAAAATTCATTTTTCAATATCGGCAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATTTTTCGATGTAAAAATACTGCATCTTCT---ATTGCTGATTTTATTGTAGAACATCTAGAAAAACGAGTTCCATATAAAGTTGTATTTGTTTTATTAAAAAAACATTTACAAAGACAAAAACATTCAGCT---------------------------------TTAGGAATGAAAGTTCAAATTGCTGGC Halimeda_tuna_1_HV458_AY823912 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTCAACGTAAACGTAAA------CGT---------------TAA------ATGGGACAAAAAGTACATCCGTTGGGGTTTCGATTAGGTATCACACAACCTCATTTATCACAATGGTATGCTTCCAAAAGACATTATTCAAAATATGTATTGGAAGATAATTTTGTAAGAACAATATTGTCAGAAAAATATAAAAGAGCCAAATTTGAAAAAATTAAAATTTCTCGTAAAATAGAAGATCATCTCGAAATAGTGATCCACGCCCAAAAACCTGATATTCTGATTGGTAAAAAAAGT------------------GAGAATTTAGAAGTTTTTCAAAAACAAATTAAAAAATTCATTTTTCAATATCGGCAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATTTTTCGATGTAAAAATACTGCATCTTCT---ATTGCTGATTTTATTGTAGAACATCTAGAAAAACGAGTTCCATATAAAGTTGTATTTGTTTTATTAAAAAAACATTTACAAAGACAAAAACATTCAGCT---------------------------------TTAGGAATGAAAGTTCAAATTGCTGGC Halimeda_tuna_1_HV459_AY823913 GGTGAGTTTGCACCTACACGTTATTTTCGAGGTCATAAAAACACTGATAAA------AAATTTCAACGTAAACGTAAA------CGT---------------TAA------ATGGGACAAAAAGTACATCCGTTGGGGTTTCGATTAGGTATCACACAACCTCATTTATCACAATGGTATGCTTCCAAAAGACATTATTCAAAATATGTATTGGAAGATAATTTTGTAAGAACAATATTGTCAGAAAAATATAAAAGAGCCAAATTTGAAAAAATTAAAATTTCTCGTAAAATAGAAGATCATCTCGAAATAGTGATCCACGCCCAAAAACCTGATATTCTGATTGGTAAAAAAAGT------------------GAGAATTTAGAAGTTTTTCAAAAACAAATTAAAAAATTCATTTTTCAATATCGGCAAATTGAATGGAACTCAAAACTTAAAGTTATATTATATATTTTTCGATGTAAAAATACTGCATCTTCT---ATTGCTGATTTTATTGTAGAACATCTAGAAAAACGAGTTCCATATAAAGTTGTATTTGTTTTATTAAAAAAACATTTACAAAGACAAAAACATTCAGCT---------------------------------TTAGGAATGAAAGTTCAAATTGCTGGC Halimeda_tuna_2_H0113_AY823907 NNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGGTCATAAAAAGACTGATAAAAAAGTCAAACTCAAACGT---------------CGTCGTAAA------AGTTAA------ATGGGACAAAAAGTACATCCGTTAGGGTTTCGAGTAGGAATTACACAACCGCATTTATCACAATGGTACGCTTCCAAGAGATATTATTCACAATATGTATTGGAAGATAATTTTATAAGGACAATATTGTTAAAAAAGTATAAAAGAGCAAATTTTTCAAAAATTCATATTTCTCGTAAAACAGACGATCACTTCGAAATAGTGATCCATGCTCAAAACCTGGGAATTCTGATTGGTACAAAAAGTGAAAAAAGTGAAAAAAGTGAAAAATTCAAACTTTTTCAAAAACAAATCAAAGAGTTCATTTTTCACTATCGACAAAGTGAATGGAACTCAAAACTGAGAGTTGTATTACATATATTTCGATGTAAAACGAGTGCATCTTCT---ATTGCTGATTTTATTGTGGAACATCTGGAAAGACGCGTTCCATATAAAGTTGTATTTAATTTATTAAAAAAACATTTACAAAGACAAGAACGACAAGAACGACAAGAACACTTTGATTCAGCTTTAGGG---ATAGGGATGAAAATTCAAATTTCTGGC Halimeda_tuna_2_H0493_AY823908 NNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGGTCATAAAAAGACTGATAAA------AAAGGCAAACGT---------------CGTCGTAAA------AGTTAA------ATGGGACAAAAAGTACATCCGTTAGGGTTTCGAGTAGGAATTACACAACCGCATTTATCACAATGGTACGCTTCCAAGAAATATTATTCACAATATGTATTGGAAGATAATTTTATAAGGACAATATTGTTAAAAAAGTATAAAAGAGCAAATTTTTCAAAAATTCATATTTCTCGTAAAACAGCCAATCACTTCGAAATAGTGATCCATGCTCAAAACCTGGGAATTCTGATTGGTACAAAAAGT------------------GAAAAATTAAAACTTTTTCAAAAACAAATCAAAGAGTTCATTTTTCACTATCGACAAAGTGAATGGAACTCAAAACTGAAAGTTGTATTACATATATTTCGATGTAAAACGAGTGCATCTTCT---ATTGCTGATTTTATTGAGGAACATCTGGAAAGACGCGTTCCATATAAAGTTGCATTTAATTTATTACAAAAACATTTACAAAGACAAGAACGACAAGAA---CACTTTATC{AC}AAGATTCAGCTTTAGGGATTTTAGGGATGAAAATTCAAATTTCTGGC ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = 'rps19-rps3') = N: 1-660; CODONPOSSET CodonPositions (CHARACTERS = 'rps19-rps3') = N: 1-660; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M1041] TITLE ITS; LINK TAXA = Taxa1; DIMENSIONS NCHAR=528; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=N GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Halimeda_cuneata_1_H0195_1_AF407256 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACGA-------GA{AG}TT---C--GAAC--AGGCG-TCAG--C--------CAGA---G--GCGA--CGCCGGAGTCTAGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCCTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCCGCG--CCAGTGCTCTCCCCTCGG-TCGC-GGAGAGGCGG{CT}AGTGGACGAGACACCCG----ACGGAC--G---TCGGCGTGTCCGTGCCAGCGC-GCCGGTCTCCAACGCTC-GG--TCGAAGGACTTG-A-GCG----ACGGACGACAGT---C---GAGAC------------GCTTCGATGTCCTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_cuneata_1_KZN2K4_21_AY823840 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACGA-------GAATT---C--GAAC--AGGCG-TCAG--C--------CAA----G--GCGA--CGCCGGAGTCTAGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCCTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCCGCG--CCAGTGCTCTCCCCTCGG-TCGC-GGAGAGGCGGCAGTGGACGAGACACCCG----ACGGAC--G---TCGGCGTGTCCGTGCCAGCGC-GCCGGTCTCCAACGCTC-GG--TCGAAGGACTTG-A-GCG----ACGGACGACAGT---C---GAGAC------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_cuneata_1_KZN2K4_41_AY823842 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACGA-------GAATT---C--GAAC--AGGCG-TCAG--C--------CAA----G--GCGA--CGCCGGAGTCTAGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCCTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCCGCG--CCAGCGCTCTCCCCTCG{AG}-TCGC-GGAGAGGCGGCAGTGGACGAGACACCCG----ACGGAC--G---TCGGCGTGTCCGTGCCAGCGC-GCCGGTCTCCAACGCTC-GG--TCGAAGGACTTG-A-GCG----ACGGACGACA{CG}T---C---GAGAC------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_cuneata_2_KZN2K4_20_AY823843 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACGA-------GAATT---C--GAAC--AGGCG-TCAG--CGCTTCG--CAA----GAGGCGA--CGCCGGAGTCTAGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCCTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCCGCG--CCAGCGCTCTCCC-TC-GATCGC-GGAGAGGCG{AG}CAGTGGACGCGACACCCG----ACCGAC--G---TCGGCGTGTCCGTGCCAGCGC-GCCGGTCGCCGCAGCTC-GG--TCGAAGGACC-GCA-GC----CACGGACGACAGT---C---GAGAC------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_cuneata_2_KZNb2352_AY823841 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACGA-------GAATT---C--GAAC--AGGCG-TCAG--CGCTTCG--CAA----GAGGCGA--CGCCGGAGTCTAGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCCTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCCGCG--CCAGCGCTCTCCC-TC-GATCGC-GGAGAGGCGGCAGTGGACGCGACACCCG----ACCGAC--G---TCGGCGTGTCCGTGCCAGCGC-GCCGGTCGCCGCAGCTC-GG--TCGAAGGACC-GCA-GC----CACGGACGACAGT---C---GAGAC------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_cuneata_3_H0210_AY823844 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AATGC-------GAATT---C--G-G---AGGCG-TCGAAGCCCTCA----GA-G--G--GCGA--CGCCGGAGTGTGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCCTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCTGCA--AGAGCGCTCTCCCCTC-GACGGC-GGAGAGGCGGCAGTGGACGCGACACCCG----ACCGAC--G---TCGGCGTGTCCGTGCCAGCGC-GCCGGTCGCCGCAGCTC-GG--TCGAAGGACCTG-A-GCG----ACGGACGGCAGT---CT--GAAAC------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_cuneata_3_WA182_AY823838 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AATGC-------GAATT---C--G-G---AGGCG-TCGAAGCCCTCA----GA-G--G--GCGA--CGCCGGAGTGTGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCCTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCTGCA--AGAGCGCTCTCCCCTC-GACGGC-GGAGAGGCGGCAGTGGACGCGACACCCG----ACCGAC--G---TCGGCGTGTCCGTGCCAGCGC-GCCGGTCGCCGCAGCTC-GG--TCGAAGGACCTG-A-GCG----ACGGACGGCAGT---CT--GAAAC------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_cuneata_4_SOC212b_AY823845 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACGC-------GAATT---C--G-G---AGGCG-TCGAGGCCCTCT----GC-G--G--GCGA--CGCCGGAGTGAGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCTGCA--CCAGCGCTCTCCCCTC-GACGGC-GGAGAGGCGGCAGTGGACGCGACACCCG----ACCGAC--G---TCGGCGTGTCCGTGCCAGCGC-GCCGGTCGCCGCAGCTC-GG--TCGAAGGACCTG-A-GCG----ACGGACGGCAGT---C---GAAAC------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_cuneata_4_SOC252_AF525595 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACGC-------GAATT---C--G-G---AGGCG-TCGAGGCCCTCT----GC-G--G--GCGA--CGCCGGAGTGAGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCTGCA--CCAGCGCTCTCCCCTC-GACGGC-GGAGAGGCGGCAGTGGACGCGACACCCG----ACCGAC--G---TCGGCGTGTCCGTGCCAGCGC-GCCGGTCGCCGCAGCTC-GG--TCGAAGGACCTG-A-GCG----ACGGACGGCAGT---C---GAAAC------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_cuneata_4_SOC348_AF525596 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACGC-------GAATT---C--G-G---AGGCG-TCGAGGCCCTCT----GC-G--G--GCGA--CGCCGGAGTGAGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCTGCA--CCAGCGCTCTCCCCTC-GACGGC-GGAGAGGCGGCAGTGGACGCGACACCCG----ACCGAC--G---TCGGCGTGTCCGTGCCAGCGC-GCCGGTCGCCGCAGCTC-GG--TCGAAGGACCTG-A-GCG----ACGGACGGCAGT---C---GAAAC------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_cuneata_7_H0500_AF823837 TTTTCGTAGGTGAACCTGCGAAAGGATCATTACCGGCACATCCC---------CAACAC-C-----G--CT---CG-GA----AGGCG-TCCG--CCCCTCG-TCGG-GCAG--GCGA--CGCCGGAGTCTCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCCGCA-GGCCGCGCTCTCCCCCTCG-TCGC-GGAGAGGCAGCAGTGGACGCGGCACCCG----ACCG-CG-GG--TCGGCGTGCCCGTACCGGCGCTCCCCGTC{AG}CCGCCGCTC-GG--TCGAAGGGCCAGCG-GCGCGAGGCGCACCACGTT---C---GAGAC------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_cuneata_7_H0501_AY823850 TTTTCGTAGGTGAACCTGCGAAAGGATCATTACCGGCACATCCC---------CAACAC-C-----G--CT---CG-GA----AGGCG-TCCG--CCCCTCG-TCGG-GCAG--GCGA--CGCCGGAGTCTCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCCGCA-GGCCGCGCTCTCCCCCTCG-TCGC-GGAGAGGCAGCAGTGGACGCGGCACCCG----ACCG-CG-GG--TCGGCGTGCCCGTACCGGCGCTCCCCGTCACCGCCGCTC-GG--TCGAAGGGCCAGCG-GCGCGAGGCGCACCACGTT---C---GAGAC------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_cuneata_7_H0502_AY823851 TTTTCGTAGGTGAACCTGCGAAAGGATCATTACCGGCACATCCC---------CAACAC-C-----G--CT---CG-GA----AGGCG-TCCG--CCCCTCG-TCGG-GCAG--GCGA--CGCCGGAGTCTCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCCGCA-GGCCGCGCTCTCCCCCTCG-TCGC-G{AG}A{AG}AGGCAGCAGTGGACGCGGCACCCG----ACCG-CG-GG--TCGGCGTGCCCGTACCGGCGCTCCCCGTC{AG}CCGCCGCTC-GG--TC{AG}AAGGGCCAGCG-GCGCGAGGCGCACCACGTT---C---GAGAC------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_cuneata_f_digitata_Philippines_HV605_AY823846 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC---------AAAGA--------GAATT---C--GAAC--AGGCG-TCCG--CGC{CT}AC----------G--GCGA--CGCCGGAGT-TGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGTGGAGGGAGGACGCGTCGGCGACATCGCCCTGCA---CA--GCCCTCGGAC------GA-CGAGAGGCGGCAGTGGACGAGGCACCCG----AC{AG}GAC--G---TCGGCGTGTCCGTGCCAGCAC-GCACGTCACCGC{AT}GCTCTGG--TCGAAGGACCTC-A-GCG----ACGGACGACTGT---C---GAAG-------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_cuneata_f_digitata_Philippines_HV732_AY823847 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC---------AAAGA--------GAATT---C--GAAC--AGGCG-TCCG--CGCCAC----------G--GCGA--CGCCGGAGT-TGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGTGGAGGGAGGACGCGTCGGCGACATCGCCCTGCA---CA--GCCCTCGGAC------GA-CGAGAGGCGGCAGTGGACGAGGCACCCG----ACGGAC--G---TCGGCGTGTCCGTGCCAGCAC-GCACGTCACCGCTGCTCTGG--TCGAAGGACCTC-A-GCG----ACGGACGACTGT---C---GAAG-------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_cuneata_f_undulata_H0122_AF407252 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCCA{GT}CGAGAGAGAACGC-C-----GCATT---C--GTGCGGAGGCG-TC-G--CA--------GA----G-AACGA--CGCCGCAGTCTCGGAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTCCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCCGCG--CCAGCGCTCTCCCTTC-GACGGC-GGAGAGGCGACGGTGGACGAGGCACCCGACCGACNGAC--GTCGTCGGCGTGTCCGTGCCAGCGC-GACTGTCGACGCCGCTC-GG--TCCAAGCGCC-GAACGCG----GCGGACGACGCT---C---GTAC-------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_cuneata_f_undulata_HV586_AY823848 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCCATCGAGAGAGAACGC-C-----GCATT---C--GTGCGGAGGCG-TC-G--CA--------GA----G-AACGA--CGCCGC{AG}GTCTCGGAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTCCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCCGCG--CCAGCGCTCTCCCCTC-GACGGC-GGAGAGGCGACGGTGGACGAGGCACCCGACCGACTGAC--GTCGTCGGCGTGTCCGTGCCAGCGC-GACTGTCGACGCCGCTC-GG--TCCAAGCGCC-GAA{AC}GCG----GCGGGCGAC{AG}CC---C---GTGCACTC{AT}{CG}AACGAACGCTGCGATGTC{GT}TC{GT}GCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_cuneata_f_undulata_HV683_AY823849 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCCAGCGAGAGAGAACGC-C-----GCATT---C--GTGCGGAGGCG-TC-G--CA--------GA----G-AACGA--CGCCGCAGTCTCGGAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTCCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCCGCG--CCAGCGCTCTCCCCTC-GACGGC-GGAGAGGCGACGGTGGACGAGGCACCCGACCGACAGAC--GTCGTCGGCGTGTCCGTGCCAGCGC-GACTGTCGACGCCGCTC-GG--TCCAAGCGCC-GAACGCG----GCGGGCGACGCC---C---GTGCACTCAGAACGAACGCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_discoidea_1_99_029_AF525605 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC---------AAAGA--------GAATT---C--GAAC--AGGCG-TCAG--CGCTAC----------G--GCGA--CGCCGGAGT-TGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGAAGATA-GAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGTGGAGGGAGGACGCGTCGGCGACATCGCCCTGCA---CA--GCCCTCGGAC------GA-CGAGAGGCGGCAGTGGACGAGGCACCCG----GCAGAC--G---TCGGCGTGTCCGTGCCAGCAC-GCACGTCACCGCAGCTCTGG--TCGAAGGACCTG-A-GCG----ACGGACGACTGT---C---GAAG-------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATTAGCGG Halimeda_discoidea_1_AF525598 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC---------AAATA--------GAATT---C--GAAC--AGGCG-TCCG--CGCTAC----------G--GCGA--CGCCGGAGT-TGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGTGGAGGGAGGACGCGTCGGCGACATCGCCCTGCA---CA--GCCCTCGGAC------GA-CGAGAGGCGGCAGTGGACGAGGCACCCG----ACAGAC--G---TCGGCGTGTCCGTTCCAGCAC-GCACGTCACCGCAGCTCTGG--TCGAAGGACCTC-A-GCG----ACGGACGACTGT---C---GAAG-------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_discoidea_1_AF525600 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC---------AAAGA--------GAATT---C--GAAC--AGGCG-TCCG--CGCTAC----------G--GCGA--CGCCGGAGT-TGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGTGGAGGGAGGACGCGTCGGCGACATCGCCCTGCA---CA--GCCCTCGGAC------GA-CGAGAGGCGGCAGTGGACGAGGCACCCG----ACAGAC--G---TCGGCGTGTCCGTGCCAGCAC-GCACGTCACCGCAGCTCTGG--TCGAAGGACCTC-A-GCG----ACGGACGACTGT---C---GAAG-------------GCTGCGATGTCCTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_discoidea_1_AF525601 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC---------AAAGA--------GAATT---C--GAAC--AGGCG-TCCG--CGCTAC----------G--GCGA--CGCCGGAGT-TGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTT{CT}GGGTGGAGGGAGGACGCGTCGG{CT}GACATCGCCCTGCA---CA--GCCCTCGGAC------GA-CGAGAGGCGGCAGTGGACGAGGCACCCG----ACGGAC--G---TCGGCGTGTCCGTGCCAGCAC-GCACGTCACCGCAGCTCTGG--TCGAAGGACCTC-A-GCG----ACGGACGACTGT---C---GAAG-------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_discoidea_1_H0041_AF525604 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC---------AAAGA--------GAATT---C--GAAC--AGGCG-TCAG--CGCTAC----------G--GCGA--CGCCGGAGT-TGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGTGGAGGGAGGACGCGTCGGCGACATCGCCCTGCA---CA--GCCCTCGGAC------GA-CGAGAGGCGGCAGTGGACGAGGCACCCG----ACAGAC--G---TCGGCGTGTCCGTGCCAGCAC-GCACGTCACCGCAGCTCTGG--TCGAAGGACCTC-A-GCG----ACGGACGACTGT---C---GAAG-------------GCTGCGATGTCCTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_discoidea_1_H0117_AF525597 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC---------AAAGA--------GAATT---C--GAA{CT}--AGGCG-TCCG--CGCTAC----------G--GCGA--CGCCGGAGT-TGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGTGGAGGGAGGACGCGTCGGCGACATCGCCCTGCA---CA--GCCCTC{GT}GAC------GA-CGAGAGGCGGCAGTGGACGAGGCACCCG----GCGGAC--G---TCGGCGTGTCCGTGCCAGCAC-GCACGTCACCGCAGCTCTGG--TCGAAGGACCTC-A-GCG----ACGGACGACTGT---C---GAAG-------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_discoidea_1_H0153_AF525602 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC---------{AG}AAGA--------GAATT---C--GAAC--AGGCG-TCCG--CGCTAC----------G--GCGA--CGCCGGAGT-TGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGTGGAGGGAGGACGCGTCGGCGACATCGCCTTGCA---CA--GCCCTCGGAC------GA-CGAGAGGCGGCAGTGGACGAGGCACCCG----GCGGAC--G---TCGGCGTGTCCGTGCCAGCAC-GCACGTCACCGCAGCTCTTGG-TCGAAGGACCTC-A-GCG----ACGGACGACTGT---C---GAAG-------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_discoidea_1_H0191_AF525599 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC---------AAAGA--------GAATT---C--GAAC--AGGCG-TCCG--CGCCAC----------G--GCGA--CGCCGGAGT-TGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGTGGAGGGAGGACGCGTCGGCGACATCGCCCTGCA---CA--GCCCTCGGAC------GA-CGAGAGGCGGCAGTGGACGAGGCACCCG----ACAGAC--G---TCGGCGTGTCCGTGCCAGCAC-GCACGTCACCGC{AT}GCTCTGG--TCGAAGGACCTC-A-GCG----ACGGACGACTGT---C---GAAG-------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_discoidea_1_HEC12634b_AF525603 TTTTCGTAGGTGCACCTGCGAAAGGATCATTATCGGCACATCCC---------AAAGA--------GAATT---C--GAAC--AGGCG-TCCG--CGCTAC----------G--GCGA--CGCCGAAGT-TGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGTGGAGGGAGGACGCGTCGGCGACATCGCCCTGCA---CA--GCCCTCGGAC------GA-CGAGAGGCGGCAGTGGACGAGGCACCCG----ACGGAC--G---TCGGCGTGTCCGTGCCAGCAC-GCACGTCACCGCAGCTCTGG--TCGAAGGACCTC-A-GCG----ACGGACGACTGT---C---GAAG-------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_discoidea_1_MAS153_AY823852 TTTTCNTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACGA-------GAATT---C--GAAC--AGGCG-TCAG--CTCT-------A---GG--GCGA--CGCCGGAGTCTGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGTGGAGGGAGGACGCGTCGGCGACATCGCCCTGCA---CA--GCCCTCGGAC------GA-GGAGAGGCACCAGTGGACGAGGCACCCG----ACGGAC--G---TCGGCGTGTCCGTGCCAGCGC-GCATCTCGCCGTAGCTA-GG--TCGAAGGACCTC-G-GCG----ACGGACGACTGT---C---GAGA-------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_discoidea_1_MAS356_AY823853 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACGA-------GAATT---C--GAAC--AGGCG-TCAG--CTCT-------A---GG--GCGA--CGCCGGAGTCTGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGTGGAGGGAGGACGCGTCGGCGACATCGCCCTGCA---CA--GCCCTCGGAC------GA-GGAGAGGCACCAGTGGACGAGGCACCCG----ACGGAC--G---TCGGCGTGTCCGTGCCAGCGC-GCATCTCGCCGTAGCTA-GG--TCGAAGGACCTC-G-GCG----ACGGACGACTGT---C---GAGA-------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_discoidea_1_OMII118_AF823839 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACGA-------GAATT---C--GAAC--AGGCG-TCAG--CTCT-------A---GG--GCGA--CGCCGGAGTCTGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGTGGAGGGAGGACGCGTCGGCGACATCGCCCTGCA---CA--GCCCTCGGAC------GA-GGAGAGGCACCAGTGGACGAGGCACCCG----ACGGAC--G---TCGGCGTGTCCGTGCCAGCGC-GCATCTCGCCGTAGCTA-GG--TCGAAGGACCTC-G-GCG----ACGGACGACTGT---C---GAGA-------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_discoidea_1_SOC212a_AY823854 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC---------AAAGA--------GAATT---C--GAAC--AGGCG-TCAG--CGCTAC----------G--GCGA--CGCCGGAGT-TGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCG{CT}GTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGTGGAGGGAGGACGCGTCGGCGACATCGCCCTGCA---CA--GCCCTCGGAC------GA-CGAGAGGCGGCAGTGGACGAGGCACCCG----GCAGAC--G---TCGGCGTGTCCGTGCCAGCAC-GCACGTCACCGCAGCTCTGG--TCGAAGGACCTG-A-GCG----ACGGACGACTGT---C---GAAG-------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_discoidea_1_SOC299_AF407254 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC---------AAAGA--------GAATT---C--GAAC--AGGCG-TCAG--CGCTAC----------G--GCGA--CGCCGGAGT-TGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGAAGATA-GAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGTGGAGGGAGGACGCGTCGGCGACATCGCCCTGCA---CA--GCCCTCGGAC------GA-CGAGAGGCGGCAGTGGACGAGGCACCCG----GCAGAC--G---TCGGCGTGTCCGTGCCAGCAC-GCACGTCACCGCAGCTCTGG--TCGAAGGACCTG-A-GCG----ACGGACGACTGT---C---GAAG-------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATTAGCGG Halimeda_discoidea_2_H0144_AF525585 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACAC-T-----G--TCAAATGTGAA---AGGCG-TCAG--CCCTGCGCTCG---CAG--GCGA--CGCCGGAGTTTCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCAACATCGCCCTGCACATCAGCGCTCTCCCCTC-G-TCGC-GGAGAGGCAGCGGTGGACGCGGCACCCG----ACTGCCC-G---TCGGCGTGCCCGTGCCAGCTCTCGCCGTCGCCGCCGCTC-GG--TCGAATGACCTGCA-GCGG-ACGCGGAC-AC--A---C--AGAGAC------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_discoidea_2_H0207_AF407249 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACAC-T-----G--TCAAATGTGAA---AGGCG-TCCG--CCCTGCGCTCG---CAG--GGAA--CGCCGGAGTTTCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCTGCACATCAGCGCTCTCCCCTC-G-TCGC-GGAGAGGCAGCGGTGGACGCGGCACCCG----ACTGCCC-G---TCTGCGTGCCCGTGCCAGCTCTCGCCGTCGCCGCCGCTC-GG--TCGAATGACCCGCA-GCGG-ACGCGGAC-AC--A---C--AGAGAC------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_discoidea_2_H0209_AF525587 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACAC-T-----G--TCAAATGTGAA---AGGCG-TCAG--CCCTGCGCTCG---CAG--GAGA--CGCCGGAGTTTCGAAAGCATGCGTGTTGGACGGCTCGGTTCCCGTGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCTTCGCCTTCGGGCGGAGGGAGGACGCGTCGGGCACATCGCCCTGCACATCAGCGCTCTCCCCTC-G-TCGC-GGAGAGGCAGCGGTGGACGCGGCACCCG----ACTGCCC-G---TCTGCGTGCCCGTGCCAGCTCTCGCCGTCGCCGCCGCTC-GG--TCGAATGACCCGCA-GCGG-ACGCGGAC-AC--A---C--AGAGAC------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_discoidea_2_H0410_AF525586 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACAC-T-----G--TCAAATGTGAA---AGGCG-TCAG--CCCTGCGCTCG---CAG--GCGA--CGCCGGAGTTTCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCAACATCGCCCTGCACATCAGCGCTCTCCCCTC-G-TCGC-GGAGAGGCAGCGGTGGACGCGGCACCCG----ACTGCCC-G---TCGGCGTGCCCGTGCCAGCTCTCGCCGTCGCCGCCGCTC-GG--TCGAATGACCTGCA-GCGG-ACGCGGAC-AC--A---C--AGAGAC------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_discoidea_2_HV495_AY823855 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACAC-T-----G--TCAAATGTGAA---AGGCG-TC{AG}G--CCCTGCGCTCG---CAG--GAGA--{CT}GCCGGAGTTTCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCTGCACATCAGCGCTCTCCCCTC-G-TCGC-GGAGAGGCAGCGGTGGACGCGGCACCCG----ACTGCCC-G---TCGGCGTGCCCGTGCCAGCTCTCGCCGTCGTCGCCGCTC-GG--TCGAATGACCTGCA-GCGG-ACGCGGAC-AC--A---C--AGAGAC------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_gracilis TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------TATTCTC-----GAACT---C--AAAC--AGGCGCTCAG--CCCT-T----G-----G--GCGA--CGCTGCAGTATCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCTGGCGGAGGGAGGACNCGTCGG{CG}NACATCGCCCCGNA--CCACCGCTCTCCCACC--ACCGAGGGAAAGGCGGCAGTGGACGGAGCACCCG------------GA---CGGCGTGTCCGTTCCCGCTCGCNCAGTCGCTCCGNGT--GGCCTCNACANACCNGNG-GNCCNACTCGACCGAAANA-------NAANCC-----------GTNGCNATGCCGTCGGCNAGGAAACCCGTTGAACTTAANCNNATNATTAANCGG Halimeda_hummii_H0251_AF525583 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC------GACCGACACACA----G--TC--CC--GAA---AGGCG-TC-G--CCCCTC---CGA--GGG--GCGGG-CGCCGGAGTCTCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCCTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCCGCA-AGCAGCGCTCTCCCCCTCG-TCGC-GGAGAGGCCG{AC}GGTGGACGAGGCACCCG----ACTGACC-G---TCGGCGTGCCCGTGCAGGCGCCCCGCGTCGCCGCCGCCA-GG--TCGAAGGGCCGGCG-GTCGGAGGCGAGC-ACGTT---C-GAAAGAC------------GCCGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_lacunalis_H0118_AF407246 TTTTCGTAGGTGAGCCTGCGAAAGGGTCATTATCGGCACATCCC----------AACACACACATCG--TT---C--GAA---AGGCG--C-G--CCTCTT---------GG--GCGA--CGCCGGAGCTTAGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCTTCGCCCTCGGGCGTGGGGAGGACGCGTCGGCGACATCGCCCTGTG-TGCAGCGCTCTCCTCCTTGATCTC-GGAGAGGCGGCAGTGGACG-GACACCCG----TCGGACAGG---TCGGCGTGCCCGTTGAAGAGCTGCCCGTCGACGTCGCTC-GG--TCGAAGGACCGTCG-GCG----AGAGAC-GCA-T---C---GAAAGGTAA--------GTTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_lacunalis_H0121_AF525579 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACACACACATCG--TT---C--GAA---AGGCG--C-G--CCTCTT---------GG--GCGA--CGCCGGAGCTTAGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCTTCGCCCTCGGGCGTGGGGAGGACGCGTCGGCGACATCGCCCTGTG-TGCAGCGCTCTCCTCCTTGATCTC-GGAGAGGCGGCAGTGGACG-GACACCCG----TCGGACAGG---TCGGCGTGCCCGTTGAAGAGCTGCCCGTCGACGTCGCTC-GG--TCGAAGGACCGTCG-GCG----AGAGAC-GCA-T---C---GAAAGGTAA--------GTTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_lacunalis_H0212_AF525580 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACACACACATCG--TT---C--GAA---AGGCG--C-G--CCTCTT---------GG--GCGA--CGCCGGAGCTTAGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCTTCGCCCTCGGGCGTGGGGAGGACGCGTCGGCGACATCGCCCTGTG-TGCAGCGCTCTCCTCCTTGATCTC-GGAGAGGCGGCAGTGGACG-GACACCCG----TCGGACAGG---TCGGCGTGCCCGTG{AT}A-GAGCTGCCCGTCGACGTCGCTC-GG--TC{GT}AACGACCGTCG-GCG----AGAGAC-GCA-T---C---GAAAGGTAA--------GTTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_lacunalis_HV306_1_AY786519 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACACACACATCG--TT---C--GAA---AGGCG--C-G--CCT{CG}TT---------GG--GCGA--CGCCGGAGCTTAGAAAGCATGCG{GT}GG{CT}GGACGGCTCGGTTCCCGCGTC{AG}ATGAAGGACGTAGCGA-GATACGAA{AG}GGTGTTGCGAATTGCAAGATTTCGCGAGTCA{AC}TGACCATCCGAATGCATCGCC{GT}CCCTCCCTTCGCCCTCGGGCGTGGGGAGGACGCGTCGG{AC}{GT}ACATCGCCCTGTG-TGCAGCGCTCTCCT{CG}CTTGATATC-{AG}GAGAGGCGG{CG}AG{CT}GGAC{AG}-GACACCCG----ACGGACAGG---TCGGCGTGCCCGTT{AC}AAGAGCTGCCCGTCGACGTCGCTC-GG--TCTAACGACCGTCG-GCG----AGAGAC-GCA-T---C---GAAAGGTAA--------GTTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_lacunalis_HV308_1_AY786520 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGC{AG}CATCCC----------AACACACACATCG--TT---C--GAA---AGGCG--C-G--CCTCTT---------GG--GCGA--CGCCGGAGCTTAGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCTTCGCCCTCGGGCGTGGGGAGGACGCGTCGGCGACATCGCCCT{AG}TG-TGCAGCGCTCTCCTCCTTGATATC-GGAGAGGCGGCAGTGGAC{AG}-GACACCCG----ACGGACAGG---TCGGCGTGCCCGTTCAAGAGCTGCCCGTCGACGTCGCTC-GG--TCTAACGACCGTCG-GCG----AGAGAC-GCA-T---C---GAAAGGTAA--------GTTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_macrophysa TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AANNNNN-----N--TT---C--GAA---AGGCG-TC-G--ACTTCT---C-A--GAG--GCGA--CGCCGGAGTCTCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAA{GT}GACGTAG{CT}GA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCTGC{AG}--CCAGCGCTCTCCC-TC-GATCGC-GGAGAGGC{CT}GCGGTGGACGCGACACCCG----AC{CT}G-TT-GAAGTCGGCGTGTCCGTGCGAGCGC-GACTGTCGACGC{CT}GCCC-TG--TCCAAGAAC--GAG-G{CT}G----GCGGACGACGCTGAAC---GAAAC------------GCCGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_magnidisca TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AATGC-------GAATT---C--GAAC--AGGCG-TCCACGCC{CT}TCC----GA-G--G--GCGA--CGCCGAAGTCTGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCTGCA--CCAGCGCTCTCCCCTC-GACGGC-GGAGAGGCGGCAGTGGACGCGACACCCG----ACCGAC--G---TCGGCGTGTCCGTGCCAGCGC-GCCGGTCGCCGCAGCTC-GG--TCGAAGGACCTG-A-GCG----ACGGACGGCAGT---C---GAAAC------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_taenicola_H0037_AF407255 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACGA-------GGATT---CTCGAAC--AGGCG-TCGGCGCCCTNT----GA-GGCG--GCGAGACGCCGGAGT-TGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCTGCG--CCAGCGCTCTCCCCTC-GATCGC-GGAGAGGCGGCAGTGGACGCTGCACCCG----ACGGAC--G---TCGGCGTGCGCGTGCCAGCGC-GCCAGTCGCCACCGCTC-GG--TCGAAGGACC-GCG-GCG----ACGGACGACGGAA------GAAA--TAC--------GGTGCGATGTCCTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_taenicola_HV285_1_AY786521 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACGA-------GGACT---CTCGAAC--AGGC-CTCGGCGCCCTCT----GA-GGCG--GCGAGACGCCGGAGT-TGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGNCCTGCG--CCAGCGCTCTCCCCTC-GATCGC-GGAGAGGCGGCAGTGGACGCTGCACCCG----ACGGAC--G---TCGGCGTGCGCGTGCCAGCGC-GCCAGTCGCCACCGCTC-GG--TCGAAGGACC-GCG-GCG----ACGGACGACGGAA------GAAA--TAC--------GGTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_taenicola_HV285_2_AY786522 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACGA-------GGACT---CTCGAAC--AGGCG-TGGGCGCCCTGT----GA-GGCG--GCGAGACGCCGGAGT-TGGAAAGCATGCGTGGTGCACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCTCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCTGCG--CCAGCGCTCTCCCCTC-GATCGC-GGAGAGGCGGCAGTGGACGCTGCACCCG----ACGGAC--G---TCGGCGTGCGCGTGCCAGCGC-GCCAGTCGCCACCGCTC-GG--TCGAAGGACC-GCG-GCG----ACGGACGACGGAA------GAAA--TAC--------GGTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_taenicola_HV306_3_AY786523 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACGA-------GGACT---CTCGAAT--AGGCG-TCGGCGCCCTCT----GA-GGCG--GCGAGACGCCGGAGT-TGGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCTGCG--CCAGCGCTCTCCCCTC-GATCGC-GGAGAGGCGGCAGTGGACGCTGCACCCG----ACGGAC--G---TCGGCGTGCGCGTGCCAGCGC-GCCAGTCGCCACCGCTC-GG--TCGAAGGACC-GCG-GCG----ACGGACGACGGAA------GAAA--TAC--------GGTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_tuna_1_H0231_AF407248 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC---------AAACAA-CA----G--TT--TC--AAAG--AGGCG-TCTG--CCTTCT---CGA--GAG--GCGA--CGCCGGAGTCTCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCCGCT-AG-AGCGCTCTCCCCCTCG-TCGC-GGAGAGGCCGCAGTGGACGAGGCAACCG----AC-GTCG-G---TCGGCGTGCCCGTGACGTCGCTCCACTTCGCCGCCGCTC-GG--TCGAAGGGCCGGCG-GTCGGAGGCGAAC-ACGTA---C-GAAAGAC------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_tuna_1_Jamaica_HV447_AY823857 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC---------AAACAA-CA----G--TT--GC--AAAG--AGGCG-TCCG--CCTTCT---CGA--GAG--GCGA--CGCCGGAGTCTCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCCGCG-AG-AGCGCTCTCCCCCTCG-TCGC-GGAGAGGCCGCAGTGGACGA{AG}GCACCCG----AC-GTCG-G---TCGGCGTGCCCGTGAC{GT}TCGCTCCACGTCGCCGCCGCTC-GG--TCGAA{AG}GGCCGGCG-GTCGGA{AG}GCGAAC-ACTTA---C-GAAAGAC------------GCTGCGATGTCGTC{AG}GCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_tuna_1_Jamaica_HV458_AY823858 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC---------AAACAA-CA----G--TT--{GT}C--AAAG--AGGCG-TC{CT}G--CCTTCT---CGA--GAG--GCGA--CGCCGGAGTCTCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTA{AG}CGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGA{AG}GGAGGACGCGTCGGCGACATCGCCCCGCG-AG-AGCGCTCTCCCCCTCG-TCGC-GGAGAGGCCGCAGTGGACGA{AG}GCACCCG----AC-GTCG-G---TCGGCGTGCCCGTGACGTCGCTCCACGTCGCCGCCGCTC-GG--TCGAAGGGCCGGCG-GTCGGAGGCGAAC-ACTTA---C-GAAAGAC------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_tuna_1_Jamaica_HV459_AY823859 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC---------AAACAA-CA----G--TT--GC--AAAG--AGGCG-TCCG--CCTTCT---CGA--GAG--GCGA--CGCCGGAGTCTCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCCGCG-AG-AGCGCTCTCCCCCTCG-TCGC-GGAGAGGCCGCAGTGGACGAGGCACCCG----AC-GTCG-G---TCGGCGTGCCCGTGAC{GT}TCGCTCCACGTCGCCGCCGCTC-GG--TCGAAGGGCCGGCG-GTCGGAGGCGAAC-ACTTA---C-GAAAGAC------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_tuna_1_Mexico_H0231_AF407248 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC---------AAACAA-CA----G--TT--TC--AAAG--AGGCG-TCTG--CCTTCT---CGA--GAG--GCGA--CGCCGGAGTCTCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCCGCT-AG-AGCGCTCTCCCCCTCG-TCGC-GGAGAGGCCGCAGTGGACGAGGCAACCG----AC-GTCG-G---TCGGCGTGCCCGTGACGTCGCTCCACTTCGCCGCCGCTC-GG--TCGAAGGGCCGGCG-GTCGGAGGCGAAC-ACGTA---C-GAAAGAC------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_tuna_1_Panama_H0074_AF525589 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC---------AAACAA-CA----G--TT--TC--AAAG--AGGCG-TCTG--CCTTCT---CGA--GAG--GCGA--CGCCGGAGTCTCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCTTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCCGCT-AG-AGCGCTCTCCCCCTCG-TCGC-GGAGAGGCCGCAGTGGACGAGGCAACCG----AC-GTCG-G---TCGGCGTGCCCGTGACGTCGCTCCACTTCGCCGCCGCTC-GG--TCGAAGGGCCGGCG-GTCGGAGGCGAAC-ACGTA---C-GAAAGAC------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_tuna_2_H0113_AF407250 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACAC-T-----G--TTGTCC-TGA----AGGCG-TCAG--CCCTCTCCTCGGAGCGGCGGCGA--CGCCGGAGTCTCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCCTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCTGCG-AG-AGCGCTCTCCCCCCAT-TCGC-GGAGAGGCCGCAGTGGACNAGGCACCCG----ACCGATT-G---TCGGCGTGCACGTGACAGCGCTGCCCGCCGTCGCCGCTC-GG--TCGAAGGACCCGCG-GCGGCAGGCGAACGATTG----C---GAACT------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_tuna_2_Malta_H0202_AF525588 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACAC-T-----G--TTGTCC-TGA----AGGCG-TCAG--CCCTCTCCTCGGAGCGGCGGCGA--CGCCGGAGTCTCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCCTCGGGCGGAGGGA{AG}GACGCGTCGGCGACAT{CT}GCCCTGCG-AG-AGCGCTCTCCCCCCAT-TCGC-GGAGAGGCCGCAGTGGACGAGGCACCCG----ACCGATT-G---TCGGCGTGCACGTGACAGCGCTGCCCGCCGTCGCCGCTC-GG--TCGAAGGACCCGCG-GCGGCAGGCGA{AC}CGATTG----C---GAATT------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCAATAAGCGG Halimeda_tuna_2_Slovenia_H0493_AY823856 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACAC-T-----G--TTGTCC-TGA----AGGCG-TCAG--CCCTCTCCTCGGAGCGGC---GA--CGCCGGAGTCTCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCCTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCTGCG-AG-AGCGCTCTCCCCCCAT-TCGC-GGAGAGGCCGCAGTGGACGAGGCACCCG----ACCGAT{GT}-G---TCGGCGTGCACGTGACAGCGCTGCCCGCCGTCGCCGCTC-GG--TCGAAGGACCCGCG-GCGGCA{GT}GCGAACGATTG----C---GAATT------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG Halimeda_tuna_2_Spain_HV319__AY786524 TTTTCGTAGGTGAACCTGCGAAAGGATCATTATCGGCACATCCC----------AACAC-T-----G--TTGTCC-TGA----AGGCG-TCAG--CCCTCTCCTCGGAGCGGCGGCGA--CGCCGGAGTCTCGAAAGCATGCGTGGTGGACGGCTCGGTTCCCGCGTCGATGAAGGACGTAGCGA-GATACGAAAGGTGTTGCGAATTGCAAGATTTCGCGAGTCAATGACCATCCGAATGCATCGCCGCCCTCCCCTCGCCCTCGGGCGGAGGGAGGACGCGTCGGCGACATCGCCCTGCG-AG-AGCGCTCTCCCCCCAT-TCGC-GGAGAGGCCGCAGTGGACGAGGCACCCG----ACCGATT-G---TCGGCGTGCACGTGACAGCGCTGCCCGCCGTCGCCGCTC-GG--TCGAAGGACCCGCG-GCGGCAGGCGAACGATTG----C---GAACT------------GCTGCGATGTCGTCGGCGAGGAAACCCGCTGAACTTAAGCATATCATTAAGCGG ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = ITS) = N: 1-528; CODONPOSSET CodonPositions (CHARACTERS = ITS) = N: 1-528; END; BEGIN TREES; TITLE Tb7628; LINK TAXA = Taxa1; TRANSLATE 1 Halimeda_cuneata_f_undulata_HV683_AY823849, 2 Halimeda_cuneata_f_undulata_HV586_AY823848, 3 Halimeda_cuneata_f_undulata_H0122_AF407252, 4 Halimeda_cuneata_f_digitata_Philippines_HV732_AY823847, 5 Halimeda_cuneata_f_digitata_Philippines_HV605_AY823846, 6 Halimeda_cuneata_7_H0502_AY823851, 7 Halimeda_cuneata_7_H0501_AY823850, 8 Halimeda_cuneata_7_H0500_AF823837, 9 Halimeda_cuneata_4_SOC348_AF525596, 10 Halimeda_cuneata_4_SOC252_AF525595, 11 Halimeda_cuneata_4_SOC212b_AY823845, 12 Halimeda_cuneata_3_WA182_AY823838, 13 Halimeda_cuneata_3_H0210_AY823844, 14 Halimeda_cuneata_2_KZNb2352_AY823841, 15 Halimeda_cuneata_2_KZN2K4_20_AY823843, 16 Halimeda_cuneata_1_KZN2K4_41_AY823842, 17 Halimeda_cuneata_1_KZN2K4_21_AY823840, 18 Halimeda_cuneata_1_H0195_1_AF407256, 19 Halimeda_discoidea_2_H0410_AF525586, 20 Halimeda_discoidea_2_H0209_AF525587, 21 Halimeda_discoidea_2_H0207_AF407249, 22 Halimeda_discoidea_2_H0144_AF525585, 23 Halimeda_discoidea_1_SOC299_AF407254, 24 Halimeda_discoidea_1_SOC212a_AY823854, 25 Halimeda_discoidea_1_OMII118_AF823839, 26 Halimeda_discoidea_1_MAS356_AY823853, 27 Halimeda_discoidea_1_MAS153_AY823852, 28 Halimeda_discoidea_1_HEC12634b_AF525603, 29 Halimeda_discoidea_1_H0191_AF525599, 30 Halimeda_discoidea_1_H0153_AF525602, 31 Halimeda_discoidea_1_H0117_AF525597, 32 Halimeda_discoidea_1_H0041_AF525604, 33 Halimeda_discoidea_1_AF525601, 34 Halimeda_discoidea_1_AF525600, 35 Halimeda_discoidea_1_AF525598, 36 Halimeda_discoidea_1_99_029_AF525605, 37 Halimeda_tuna_2_Spain_HV319__AY786524, 38 Halimeda_tuna_2_Slovenia_H0493_AY823856, 39 Halimeda_tuna_2_Malta_H0202_AF525588, 40 Halimeda_tuna_2_H0113_AF407250, 41 Halimeda_tuna_1_Panama_H0074_AF525589, 42 Halimeda_tuna_1_Mexico_H0231_AF407248, 43 Halimeda_tuna_1_Jamaica_HV459_AY823859, 44 Halimeda_tuna_1_Jamaica_HV458_AY823858, 45 Halimeda_tuna_1_Jamaica_HV447_AY823857, 46 Halimeda_tuna_1_H0231_AF407248, 47 Halimeda_taenicola_HV306_3_AY786523, 48 Halimeda_taenicola_HV285_2_AY786522, 49 Halimeda_taenicola_HV285_1_AY786521, 50 Halimeda_taenicola_H0037_AF407255, 51 Halimeda_magnidisca, 52 Halimeda_macrophysa, 53 Halimeda_lacunalis_HV308_1_AY786520, 54 Halimeda_lacunalis_HV306_1_AY786519, 55 Halimeda_lacunalis_H0212_AF525580, 56 Halimeda_lacunalis_H0121_AF525579, 57 Halimeda_lacunalis_H0118_AF407246, 58 Halimeda_hummii_H0251_AF525583, 59 Halimeda_gracilis, 60 Halimeda_discoidea_2_HV495_AY823855; TREE ML = [&R] (59,(((((((2,1),3),52),(((21,20),60),(22,19))),(((((57,56),55),(54,53)),((8,7,6),(58,((46,41,42),(45,44,43))))),((40,37),39,38))),((49,48,47),50)),((((17,18),16),14,15),(((12,13),((10,9),11)),51))),((25,27,26),(((23,36),(((31,30),33,28),35,(34,32),(29,(5,4)))),24))); END; BEGIN TREES; TITLE Tb7627; LINK TAXA = Taxa1; TRANSLATE 1 Halimeda_cuneata_f_undulata_HV683_AY823849, 2 Halimeda_cuneata_f_undulata_HV586_AY823848, 3 Halimeda_cuneata_f_undulata_H0122_AF407252, 4 Halimeda_cuneata_f_digitata_Philippines_HV732_AY823847, 5 Halimeda_cuneata_f_digitata_Philippines_HV605_AY823846, 6 Halimeda_cuneata_7_H0502_AY823851, 7 Halimeda_cuneata_7_H0501_AY823850, 8 Halimeda_cuneata_7_H0500_AF823837, 9 Halimeda_cuneata_4_SOC348_AF525596, 10 Halimeda_cuneata_4_SOC252_AF525595, 11 Halimeda_cuneata_4_SOC212b_AY823845, 12 Halimeda_cuneata_3_WA182_AY823838, 13 Halimeda_cuneata_3_H0210_AY823844, 14 Halimeda_cuneata_2_KZNb2352_AY823841, 15 Halimeda_cuneata_2_KZN2K4_20_AY823843, 16 Halimeda_cuneata_1_KZN2K4_41_AY823842, 17 Halimeda_cuneata_1_KZN2K4_21_AY823840, 18 Halimeda_cuneata_1_H0195_1_AF407256, 19 Halimeda_discoidea_2_H0410_AF525586, 20 Halimeda_discoidea_2_H0209_AF525587, 21 Halimeda_discoidea_2_H0207_AF407249, 22 Halimeda_discoidea_2_H0144_AF525585, 23 Halimeda_discoidea_1_SOC299_AF407254, 24 Halimeda_discoidea_1_SOC212a_AY823854, 25 Halimeda_discoidea_1_OMII118_AF823839, 26 Halimeda_discoidea_1_MAS356_AY823853, 27 Halimeda_discoidea_1_MAS153_AY823852, 28 Halimeda_discoidea_1_HEC12634b_AF525603, 29 Halimeda_discoidea_1_H0191_AF525599, 30 Halimeda_discoidea_1_H0153_AF525602, 31 Halimeda_discoidea_1_H0117_AF525597, 32 Halimeda_discoidea_1_H0041_AF525604, 33 Halimeda_discoidea_1_AF525601, 34 Halimeda_discoidea_1_AF525600, 35 Halimeda_discoidea_1_AF525598, 36 Halimeda_discoidea_1_99_029_AF525605, 37 Halimeda_tuna_2_Spain_HV319__AY786524, 38 Halimeda_tuna_2_Slovenia_H0493_AY823856, 39 Halimeda_tuna_2_Malta_H0202_AF525588, 40 Halimeda_tuna_2_H0113_AF407250, 41 Halimeda_tuna_1_Panama_H0074_AF525589, 42 Halimeda_tuna_1_Mexico_H0231_AF407248, 43 Halimeda_tuna_1_Jamaica_HV459_AY823859, 44 Halimeda_tuna_1_Jamaica_HV458_AY823858, 45 Halimeda_tuna_1_Jamaica_HV447_AY823857, 46 Halimeda_tuna_1_H0231_AF407248, 47 Halimeda_taenicola_HV306_3_AY786523, 48 Halimeda_taenicola_HV285_2_AY786522, 49 Halimeda_taenicola_HV285_1_AY786521, 50 Halimeda_taenicola_H0037_AF407255, 51 Halimeda_magnidisca, 52 Halimeda_macrophysa, 53 Halimeda_lacunalis_HV308_1_AY786520, 54 Halimeda_lacunalis_HV306_1_AY786519, 55 Halimeda_lacunalis_H0212_AF525580, 56 Halimeda_lacunalis_H0121_AF525579, 57 Halimeda_lacunalis_H0118_AF407246, 58 Halimeda_hummii_H0251_AF525583, 59 Halimeda_gracilis, 60 Halimeda_discoidea_2_HV495_AY823855; TREE MP_majority_rule = [&R] ((((((2,1),3),52),(((21,20),60),(22,19))),(((57,56),55),(54,53)),((((17,18),16),14,15),(((12,13),((10,9),11)),51)),(((((8,7),6),58),((46,41,42),((45,43),44))),((40,37),(39,38))),((49,48,47),50)),((25,27,26),(((((23,36),24),35,(34,32),29),(31,30),33,28),5,4)),59); END; BEGIN TREES; TITLE Tb7631; LINK TAXA = Taxa2; TRANSLATE 1 Halimeda_lacunalis_HV306_1_AY823899, 2 Halimeda_lacunalis_HV308_1_AY823900, 3 Halimeda_macrophysa_H0271_AM049987, 4 Halimeda_magnidisca_HEC12910_AY823901, 5 Halimeda_magnidisca_SOC385_AY823902, 6 Halimeda_taenicola_H0037_AY823903, 7 Halimeda_taenicola_HV285_1_AY823904, 8 Halimeda_taenicola_HV285_2_AY823905, 9 Halimeda_taenicola_HV306_3_AY823906, 10 Halimeda_tuna_1_H0074_AY823909, 11 Halimeda_tuna_1_H0231_AY823910, 12 Halimeda_tuna_1_HV447_AY823911, 13 Halimeda_tuna_1_HV458_AY823912, 14 Halimeda_tuna_1_HV459_AY823913, 15 Halimeda_tuna_2_H0113_AY823907, 16 Halimeda_tuna_2_H0493_AY823908, 17 Halimeda_cuneata_1_KZN2K4_21_AY823860, 18 Halimeda_cuneata_1_KZN2K4_41_AY823861, 19 Halimeda_cuneata_1_KZNb2263_AY823862, 20 Halimeda_cuneata_2_H0195_2_AY823863, 21 Halimeda_cuneata_2_KZN2K4_20_AY823864, 22 Halimeda_cuneata_2_KZNb2352_AY823865, 23 Halimeda_cuneata_3_H0210_AY823866, 24 Halimeda_cuneata_3_H0550_AY823867, 25 Halimeda_cuneata_3_H0551_AY823868, 26 Halimeda_cuneata_3_WA182_AY823869, 27 Halimeda_cuneata_3_WA206_AY823870, 28 Halimeda_cuneata_4_SOC212b_AY823871, 29 Halimeda_cuneata_4_SOC252_AY823872, 30 Halimeda_cuneata_4_SOC348_AY823873, 31 Halimeda_cuneata_7_H0500_AY823881, 32 Halimeda_cuneata_7_H0501_AY823882, 33 Halimeda_cuneata_7_H0502_AY823883, 34 Halimeda_cuneata_f_digitata_HV605_AY823874, 35 Halimeda_cuneata_f_digitata_HV732_AY823875, 36 Halimeda_cuneata_f_digitata_HV827_AY823876, 37 Halimeda_cuneata_f_undulata_H0122_AY823877, 38 Halimeda_cuneata_f_undulata_HV33_AM049983, 39 Halimeda_cuneata_f_undulata_HV41_AM049984, 40 Halimeda_cuneata_f_undulata_HV560_AY823878, 41 Halimeda_cuneata_f_undulata_HV586_AY823879, 42 Halimeda_cuneata_f_undulata_HV683_AY823880, 43 Halimeda_discoidea_1_H0041_AY823887, 44 Halimeda_discoidea_1_H0153_AY823888, 45 Halimeda_discoidea_1_HV58_AM049985, 46 Halimeda_discoidea_1_MAS153_AY823884, 47 Halimeda_discoidea_1_MAS356_AY823885, 48 Halimeda_discoidea_1_OMII118_AY823886, 49 Halimeda_discoidea_1_SOC212a_AY823889, 50 Halimeda_discoidea_1_SOC299_AY823890, 51 Halimeda_discoidea_2_H0144_AY823891, 52 Halimeda_discoidea_2_H0207_AY823892, 53 Halimeda_lacunalis_H0121_AY823898, 54 Halimeda_lacunalis_H0118_AY823897, 55 Halimeda_hummii, 56 Halimeda_gracilis, 57 Halimeda_discoidea_3_HV431_AY823896, 58 Halimeda_discoidea_3_HV396_AY823895, 59 Halimeda_discoidea_2_HV495_AY823894, 60 Halimeda_discoidea_2_H0209_AY823893; TREE Fig._4 = [&R] (56,(((((17,(19,18)),((((22,21),20),(5,4)),(((26,(27,(23,25))),24),((29,28),30)))),(((48,47),46),(((50,49),44),((((45,35),43),36),34)))),(7,((6,8),9))),(((37,((41,42),40)),(38,39)),3)),((((31,32),33),(((52,(60,51)),59),(58,57))),((55,(11,(10,((12,14),13)))),(((53,(1,2)),54),(15,16))))); END; BEGIN TREES; TITLE Tb7630; LINK TAXA = Taxa2; TRANSLATE 1 Halimeda_lacunalis_HV306_1_AY823899, 2 Halimeda_lacunalis_HV308_1_AY823900, 3 Halimeda_macrophysa_H0271_AM049987, 4 Halimeda_magnidisca_HEC12910_AY823901, 5 Halimeda_magnidisca_SOC385_AY823902, 6 Halimeda_taenicola_H0037_AY823903, 7 Halimeda_taenicola_HV285_1_AY823904, 8 Halimeda_taenicola_HV285_2_AY823905, 9 Halimeda_taenicola_HV306_3_AY823906, 10 Halimeda_tuna_1_H0074_AY823909, 11 Halimeda_tuna_1_H0231_AY823910, 12 Halimeda_tuna_1_HV447_AY823911, 13 Halimeda_tuna_1_HV458_AY823912, 14 Halimeda_tuna_1_HV459_AY823913, 15 Halimeda_tuna_2_H0113_AY823907, 16 Halimeda_tuna_2_H0493_AY823908, 17 Halimeda_cuneata_1_KZN2K4_21_AY823860, 18 Halimeda_cuneata_1_KZN2K4_41_AY823861, 19 Halimeda_cuneata_1_KZNb2263_AY823862, 20 Halimeda_cuneata_2_H0195_2_AY823863, 21 Halimeda_cuneata_2_KZN2K4_20_AY823864, 22 Halimeda_cuneata_2_KZNb2352_AY823865, 23 Halimeda_cuneata_3_H0210_AY823866, 24 Halimeda_cuneata_3_H0550_AY823867, 25 Halimeda_cuneata_3_H0551_AY823868, 26 Halimeda_cuneata_3_WA182_AY823869, 27 Halimeda_cuneata_3_WA206_AY823870, 28 Halimeda_cuneata_4_SOC212b_AY823871, 29 Halimeda_cuneata_4_SOC252_AY823872, 30 Halimeda_cuneata_4_SOC348_AY823873, 31 Halimeda_cuneata_7_H0500_AY823881, 32 Halimeda_cuneata_7_H0501_AY823882, 33 Halimeda_cuneata_7_H0502_AY823883, 34 Halimeda_cuneata_f_digitata_HV605_AY823874, 35 Halimeda_cuneata_f_digitata_HV732_AY823875, 36 Halimeda_cuneata_f_digitata_HV827_AY823876, 37 Halimeda_cuneata_f_undulata_H0122_AY823877, 38 Halimeda_cuneata_f_undulata_HV33_AM049983, 39 Halimeda_cuneata_f_undulata_HV41_AM049984, 40 Halimeda_cuneata_f_undulata_HV560_AY823878, 41 Halimeda_cuneata_f_undulata_HV586_AY823879, 42 Halimeda_cuneata_f_undulata_HV683_AY823880, 43 Halimeda_discoidea_1_H0041_AY823887, 44 Halimeda_discoidea_1_H0153_AY823888, 45 Halimeda_discoidea_1_HV58_AM049985, 46 Halimeda_discoidea_1_MAS153_AY823884, 47 Halimeda_discoidea_1_MAS356_AY823885, 48 Halimeda_discoidea_1_OMII118_AY823886, 49 Halimeda_discoidea_1_SOC212a_AY823889, 50 Halimeda_discoidea_1_SOC299_AY823890, 51 Halimeda_discoidea_2_H0144_AY823891, 52 Halimeda_discoidea_2_H0207_AY823892, 53 Halimeda_lacunalis_H0121_AY823898, 54 Halimeda_lacunalis_H0118_AY823897, 55 Halimeda_hummii, 56 Halimeda_gracilis, 57 Halimeda_discoidea_3_HV431_AY823896, 58 Halimeda_discoidea_3_HV396_AY823895, 59 Halimeda_discoidea_2_HV495_AY823894, 60 Halimeda_discoidea_2_H0209_AY823893; TREE ML = [&R] (56,(((((17,19,18),(5,4)),((((22,21),20),((26,27,23,24,25),(29,28,30))),((48,47,46),((50,49),(45,43,34,35,36),44)))),(7,6,8,9)),((37,41,40,42,(38,39)),3)),(((((31,32,33),((52,60,51,59),(58,57))),(53,54,(1,2))),(15,16)),(55,(11,(10,12,13,14))))); END; BEGIN TREES; TITLE Tb7632; LINK TAXA = Taxa3; TRANSLATE 1 Halimeda_cuneata_1_AY826353_AY826369_AY823860, 2 Halimeda_cuneata_2_AY826354_AY826370_AY823865, 3 Halimeda_cuneata_3_AY826355_AY826371_AY823869, 4 Halimeda_cuneata_4_AY826356_AY826372_AY823872, 5 Halimeda_cuneata_7_AY826358_AY826374_AY823881, 6 Halimeda_cuneata_undulata, 7 Halimeda_discoidea_1_AY826359_AY826375_AY823886, 8 Halimeda_discoidea_1_AY826360_AY826376_AY823890, 9 Halimeda_discoidea_2_AY826361_AY826377_AY823892, 10 Halimeda_discoidea_3_AY826362_AY826378_AY823895, 11 Halimeda_gracilis, 12 Halimeda_hummii, 13 Halimeda_lacunalis, 14 Halimeda_macrophysa, 15 Halimeda_magnidisca, 16 Halimeda_taenicola, 17 Halimeda_tuna_1_AY826367_AY826383_AY823910, 18 Halimeda_tuna_2_AY826366_AY826382_AY823907; TREE Fig._6A = [&R] ((((1,((7,8),15)),(2,(3,4))),((6,14),16)),((5,(9,10)),(((12,17),13),18)),11); END; BEGIN TREES; TITLE Tb7629; LINK TAXA = Taxa2; TRANSLATE 1 Halimeda_lacunalis_HV306_1_AY823899, 2 Halimeda_lacunalis_HV308_1_AY823900, 3 Halimeda_macrophysa_H0271_AM049987, 4 Halimeda_magnidisca_HEC12910_AY823901, 5 Halimeda_magnidisca_SOC385_AY823902, 6 Halimeda_taenicola_H0037_AY823903, 7 Halimeda_taenicola_HV285_1_AY823904, 8 Halimeda_taenicola_HV285_2_AY823905, 9 Halimeda_taenicola_HV306_3_AY823906, 10 Halimeda_tuna_1_H0074_AY823909, 11 Halimeda_tuna_1_H0231_AY823910, 12 Halimeda_tuna_1_HV447_AY823911, 13 Halimeda_tuna_1_HV458_AY823912, 14 Halimeda_tuna_1_HV459_AY823913, 15 Halimeda_tuna_2_H0113_AY823907, 16 Halimeda_tuna_2_H0493_AY823908, 17 Halimeda_cuneata_1_KZN2K4_21_AY823860, 18 Halimeda_cuneata_1_KZN2K4_41_AY823861, 19 Halimeda_cuneata_1_KZNb2263_AY823862, 20 Halimeda_cuneata_2_H0195_2_AY823863, 21 Halimeda_cuneata_2_KZN2K4_20_AY823864, 22 Halimeda_cuneata_2_KZNb2352_AY823865, 23 Halimeda_cuneata_3_H0210_AY823866, 24 Halimeda_cuneata_3_H0550_AY823867, 25 Halimeda_cuneata_3_H0551_AY823868, 26 Halimeda_cuneata_3_WA182_AY823869, 27 Halimeda_cuneata_3_WA206_AY823870, 28 Halimeda_cuneata_4_SOC212b_AY823871, 29 Halimeda_cuneata_4_SOC252_AY823872, 30 Halimeda_cuneata_4_SOC348_AY823873, 31 Halimeda_cuneata_7_H0500_AY823881, 32 Halimeda_cuneata_7_H0501_AY823882, 33 Halimeda_cuneata_7_H0502_AY823883, 34 Halimeda_cuneata_f_digitata_HV605_AY823874, 35 Halimeda_cuneata_f_digitata_HV732_AY823875, 36 Halimeda_cuneata_f_digitata_HV827_AY823876, 37 Halimeda_cuneata_f_undulata_H0122_AY823877, 38 Halimeda_cuneata_f_undulata_HV33_AM049983, 39 Halimeda_cuneata_f_undulata_HV41_AM049984, 40 Halimeda_cuneata_f_undulata_HV560_AY823878, 41 Halimeda_cuneata_f_undulata_HV586_AY823879, 42 Halimeda_cuneata_f_undulata_HV683_AY823880, 43 Halimeda_discoidea_1_H0041_AY823887, 44 Halimeda_discoidea_1_H0153_AY823888, 45 Halimeda_discoidea_1_HV58_AM049985, 46 Halimeda_discoidea_1_MAS153_AY823884, 47 Halimeda_discoidea_1_MAS356_AY823885, 48 Halimeda_discoidea_1_OMII118_AY823886, 49 Halimeda_discoidea_1_SOC212a_AY823889, 50 Halimeda_discoidea_1_SOC299_AY823890, 51 Halimeda_discoidea_2_H0144_AY823891, 52 Halimeda_discoidea_2_H0207_AY823892, 53 Halimeda_lacunalis_H0121_AY823898, 54 Halimeda_lacunalis_H0118_AY823897, 55 Halimeda_hummii, 56 Halimeda_gracilis, 57 Halimeda_discoidea_3_HV431_AY823896, 58 Halimeda_discoidea_3_HV396_AY823895, 59 Halimeda_discoidea_2_HV495_AY823894, 60 Halimeda_discoidea_2_H0209_AY823893; TREE MP_majority_rule = [&R] (56,(((((17,19,18),((22,21),20)),((26,27,23,24,25),(29,28,30))),((48,47,46),((50,49),(45,43,34,35,36),44))),((37,41,40,42,(38,39)),3),(5,4),(7,6,8,9)),((((31,32,33),((52,60,51,59),(58,57))),((53,54,(1,2)),(15,16))),(55,(11,(10,12,13,14))))); END; BEGIN TREES; TITLE Tb7626; LINK TAXA = Taxa1; TRANSLATE 1 Halimeda_cuneata_f_undulata_HV683_AY823849, 2 Halimeda_cuneata_f_undulata_HV586_AY823848, 3 Halimeda_cuneata_f_undulata_H0122_AF407252, 4 Halimeda_cuneata_f_digitata_Philippines_HV732_AY823847, 5 Halimeda_cuneata_f_digitata_Philippines_HV605_AY823846, 6 Halimeda_cuneata_7_H0502_AY823851, 7 Halimeda_cuneata_7_H0501_AY823850, 8 Halimeda_cuneata_7_H0500_AF823837, 9 Halimeda_cuneata_4_SOC348_AF525596, 10 Halimeda_cuneata_4_SOC252_AF525595, 11 Halimeda_cuneata_4_SOC212b_AY823845, 12 Halimeda_cuneata_3_WA182_AY823838, 13 Halimeda_cuneata_3_H0210_AY823844, 14 Halimeda_cuneata_2_KZNb2352_AY823841, 15 Halimeda_cuneata_2_KZN2K4_20_AY823843, 16 Halimeda_cuneata_1_KZN2K4_41_AY823842, 17 Halimeda_cuneata_1_KZN2K4_21_AY823840, 18 Halimeda_cuneata_1_H0195_1_AF407256, 19 Halimeda_discoidea_2_H0410_AF525586, 20 Halimeda_discoidea_2_H0209_AF525587, 21 Halimeda_discoidea_2_H0207_AF407249, 22 Halimeda_discoidea_2_H0144_AF525585, 23 Halimeda_discoidea_1_SOC299_AF407254, 24 Halimeda_discoidea_1_SOC212a_AY823854, 25 Halimeda_discoidea_1_OMII118_AF823839, 26 Halimeda_discoidea_1_MAS356_AY823853, 27 Halimeda_discoidea_1_MAS153_AY823852, 28 Halimeda_discoidea_1_HEC12634b_AF525603, 29 Halimeda_discoidea_1_H0191_AF525599, 30 Halimeda_discoidea_1_H0153_AF525602, 31 Halimeda_discoidea_1_H0117_AF525597, 32 Halimeda_discoidea_1_H0041_AF525604, 33 Halimeda_discoidea_1_AF525601, 34 Halimeda_discoidea_1_AF525600, 35 Halimeda_discoidea_1_AF525598, 36 Halimeda_discoidea_1_99_029_AF525605, 37 Halimeda_tuna_2_Spain_HV319__AY786524, 38 Halimeda_tuna_2_Slovenia_H0493_AY823856, 39 Halimeda_tuna_2_Malta_H0202_AF525588, 40 Halimeda_tuna_2_H0113_AF407250, 41 Halimeda_tuna_1_Panama_H0074_AF525589, 42 Halimeda_tuna_1_Mexico_H0231_AF407248, 43 Halimeda_tuna_1_Jamaica_HV459_AY823859, 44 Halimeda_tuna_1_Jamaica_HV458_AY823858, 45 Halimeda_tuna_1_Jamaica_HV447_AY823857, 46 Halimeda_tuna_1_H0231_AF407248, 47 Halimeda_taenicola_HV306_3_AY786523, 48 Halimeda_taenicola_HV285_2_AY786522, 49 Halimeda_taenicola_HV285_1_AY786521, 50 Halimeda_taenicola_H0037_AF407255, 51 Halimeda_magnidisca, 52 Halimeda_macrophysa, 53 Halimeda_lacunalis_HV308_1_AY786520, 54 Halimeda_lacunalis_HV306_1_AY786519, 55 Halimeda_lacunalis_H0212_AF525580, 56 Halimeda_lacunalis_H0121_AF525579, 57 Halimeda_lacunalis_H0118_AF407246, 58 Halimeda_hummii_H0251_AF525583, 59 Halimeda_gracilis, 60 Halimeda_discoidea_2_HV495_AY823855; TREE Fig._3 = [&R] (59,((((2,1),3),52),((((((57,56),55),(54,53)),((49,(48,47)),50)),(((((17,18),16),(14,15)),(((12,13),((10,9),11)),51)),(((25,27),26),(((23,36),24),(((((31,(30,28)),((34,32),29)),33),35),(5,4)))))),((40,37),(39,38)))),((((8,7),6),(58,(((46,41),42),((45,44),43)))),(((21,20),60),(22,19)))); END; BEGIN TREES; TITLE Tb7633; LINK TAXA = Taxa4; TRANSLATE 1 Halimeda_cuneata_1_KZN2K4_21_AY823840, 2 Halimeda_cuneata_2_KZNb2352_AY823841, 3 Halimeda_cuneata_3_WA182_AY823838, 4 Halimeda_cuneata_4_SOC252_AF525595, 5 Halimeda_cuneata_7_H0500_AF823837, 6 Halimeda_cuneata_undulata, 7 Halimeda_discoidea_1_OMII118_AF823839, 8 Halimeda_discoidea_1_SOC299_AF407254, 9 Halimeda_discoidea_2_H0207_AF407249, 10 Halimeda_discoidea_3_HV396, 11 Halimeda_gracilis, 12 Halimeda_hummii, 13 Halimeda_lacunalis, 14 Halimeda_macrophysa, 15 Halimeda_magnidisca, 16 Halimeda_taenicola, 17 Halimeda_tuna_1_H0231_AF407248, 18 Halimeda_tuna_2_H0113_AF407250; TREE Fig._6B = [&R] ((((((1,2),16),((3,4),15)),(7,8)),(6,14)),((((5,(12,17)),13),18),(9,10)),11); END;