#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 23, 2024; 14:07 GMT TreeBASE (cc) 1994-2008 Study reference: Li Y., You M., & Barbetti M.J. 2013. New Species of Pythium Associated with Seedling Root and Hypocotyl Disease on Common Bean (Phaseolus vulgaris) in Australia. Plant Disease, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S15060] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=39; TAXLABELS Pythium_conidiophorum_HQ643509 Pythium_conidiophorum_HQ643512 'Pythium conidiophorum UWA-17' 'Pythium conidiophorum UWA-20' 'Pythium conidiophorum UWA-BF03' 'Pythium conidiophorum UWA-BF04' 'Pythium conidiophorum UWA-L103' 'Pythium diclinum UWA-6R' Pythium_intermedium_EF078693 'Pythium intermedium UWA-3B' 'Pythium intermedium UWA-5B' 'Pythium intermedium UWA-L208' 'Pythium intermedium UWA-M3801' Pythium_irregulare_EU240169 Pythium_irregulare_EU240172 'Pythium irregulare UWA-1B' 'Pythium irregulare UWA-2B' 'Pythium irregulare UWA-L303' 'Pythium irregulare UWA-L406' 'Pythium irregulare UWA-M2102' 'Pythium irregulare UWA-WAC714' Pythium_lutarium_EU240086 Pythium_lutarium_JQ898467 'Pythium lutarium UWA-BF01' 'Pythium lutarium UWA-L202' 'Pythium lutarium UWA-L207' 'Pythium lutarium UWA-L401' 'Pythium lutarium UWA-L405' Pythium_mamillatum_DQ525086 Pythium_mamillatum_DQ528753 'Pythium mamillatum UWA-L106' 'Pythium mamillatum UWA-L302' Pythium_pachycaule_EF583439 'Pythium pachycaule UWA-BF02' Pythium_perplexum_FJ415965 'Pythium perplexum UWA-11B' 'Pythium perplexum UWA-12B' Rhizoctonia_solani_JQ3138111 Rhizoctonia_solani_KF305079 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M19850] TITLE ITS_of_Pythium_associated_with_seedling_root_and_hypocotyl_disease_in_Phaseolus_vulgaris; LINK TAXA = Taxa1; DIMENSIONS NCHAR=1114; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Pythium_conidiophorum_HQ643509 -----------------------------------------------------------------------------------------------------------------------------------------CCACACCATAAAAACTTTCCACGTGAA-CCGTTAAAA-TTATGTTC-TGTGCCTTCT--CTCGG-GAGGGC-TGAACGAAGGTGGACTGCGATGCTTTATTGCGTCCCGGACTGCCGATGCTTTTTCAAACCC-ATTAC-CTAATACTGATCTATACTCCTAAAACGAAAGTTTTTGGTTTTA---ATCC-ATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCACATTGCACTTTCGGGTTATGCCTGGAAGTATGCTTGTATCAGTGTCCGTACATCAAACTTGCCTTTCTTG-TTTTGTGTAGTCAAA-GACGAGAGACGGCAGAATGTGAGGTGTCTCGC------TGGCTC----CCTCCTCGG-------AGGAGAAGACG-CGAGTCCCTTTAAATGTACGTTCGCTCTTTCTTGTGCCTGGGATTGAAGTGTGACTTTCGAAC-GCGGTGATC--------TGTTT--GGATCGCTTTGCGCGAGTGGGCGACTTCGGTTAGGACATTAAAG-GAAGTGACCTCTATTGGCGGTATGTTAGGC-------TTCG---------------------------------------GCCCGACGTTGCAGCTGACGGGGTGTTGTTTT--CTGTTCTTTCCTTGAGGTGTACCTGTC-----TTGTGTGAGGCAATGGTCTG{AG}GCTA-TGGTTATCGTGTA-GTAGAATTTTGC-------TGCTCCTGCGCGCC----------GTGTAATTTATTATATGGTAAAGAAGGCAAACACCAATTTGGGACAGCTTGCGGATTTATTCGCGAGCGCTTTTTTAATTGGACCTGATATCAAGTAAGACTACCCGCTGAACTTAAG------------------------------ Pythium_conidiophorum_HQ643512 ------------------------------------------------------------------------------------------------------------------------------------------CCACACCATAAAACTTTCCACGTGAA-CCGTTAAAA-TTATGTTC-TGTGCCTTCT--CTCGG-GAGGGC-TGAACGAAGGTGGCCTGCGATGCTTTATTGCGTTGCGGACTGCCGATGCTTTTTCAAACCC-ATTAC-CTAATACTGATCTATACTCCTAAAACGAAAGTTTTTGGTTTTA---ATCC-ATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCACATTGCACTTTCGGGTTATGCCTGGAAGTATGCTTGTATCAGTGTCCGTACATCAAACTTGCCTTTCTTG-TTTTGTGTAGTCAA--GACGAGAGACGGCAGAATGTGAGGTGTCTCGC------TGGCTC----CCTCCTCGG-------AGGAGAAGACG-CGAGTCCCTTTAAATGTACGTTCGCTCTTTCTTGTGCCTGGGATTGAAGTGTGACTTTCGAAC-GCGGTGATC--------TGTTT--GGATCGCTTTGCGCGAGTGGGCGACTTCGGTTAGGACATTAAAG-GAAGTGACCTCTATTGGCGGTATGTTAGGC-------TTCG---------------------------------------GCCCGACTTTGCAGCTGACGGGGTGTTGTTTT--CTGTTCTTTCCTTGAGGTGTACCTGTC-----TTGTGTGAGGCAATGGTCTGGGCAAATGGTTATTGTGTA-GTAGAATGTTGC-------TGCTCCTGGGCGCC----------GTGTAATTCATTATATGGTAAAGAAGGCAAACACCAATTTGGGACAGCTTGTGGATTTATTCGCGAGCGCTTTTCTA----------------------------------------------------------------------- 'Pythium conidiophorum UWA-17' ---------------------------------------------------------------------------------------------------------------------------------------------------ACAACTTTCCACGTGAA-CCGTTAAAA-TTATGTTC-TGTGCCTTCT--CTCGG-GAGGGC-TGAACGAAGGTGGCCTGCGATGCTTTATTGCGTTGCGGACTGCCGATGCTTTTTCAAACCC-ATTAC-CTAATACTGATCTATACTCCTAAAACGAAAGTTTTTGGTTTTA---ATCC-ATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCACATTGCACTTTCGGGTTATGCCTGGAAGTATGCTTGTATCAGTGTCCGTACATCAAACTTGCCTTTCTTG-TTTTGTGTAGTCAA--GACGAGAGACGGCAGAATGTGAGGTGTCTCGC------TGGCTC----CCTCCTCGG-------AGGAGAAGACG-CGAGTCCCTTTAAATGTACGTTCGCTCTTTCTTGTGCCTGGGATTGAAGTGTGACTTTCGAAC-GCGGTGATC--------TGTTT--GGATCGCTTTGCGCGAGTGGGCGACTTCGGTTAGGACATTAAAG-GAAGTGACCTCTATTGGCGGTATGTTAGGC-------TTCG---------------------------------------GCCCGACTTTGCAGCTGACGGGGTGTTGTTTT--CTGTTCTTTCCTTGAGGTGTACCTGTC-----TTGTGTGAGGCAATGGTCTGGGCAAATGGTTATTGTGTA-GTAGAATGTTGC-------TGCTCCTGGGCGCC----------GTGTAATTCATTATATGGTAAAGAAGGCAAACACCAATTTGGGACAGCTTGTGGATTTATTCGCGAT--------------------------------------------------------------------------------- 'Pythium conidiophorum UWA-20' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTC-TGTGCCTTCT--CTCGG-GAGGGC-TGAACGAAGGTGGCCTGCGATGCTTTATTGCGTTGCGGACTGCCGATGCTTTTTCAAACCC-ATTAC-CTAATACTGATCTATACTCCTAAAACGAAAGTTTTTGGTTTTA---ATCC-ATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCACATTGCACTTTCGGGTTATGCCTGGAAGTATGCTTGTATCAGTGTCCGTACATCAAACTTGCCTTTCTTG-TTTTGTGTAGTCAA--GACGAGAGACGGCAGAATGTGAGGTGTCTCGC------TGGCTC----CCTCCTCGG-------AGGAGAAGACG-CGAGTCCCTTTAAATGTACGTTCGCTCTTTCTTGTGCCTGGGATTGAAGTGTGACTTTCGAAC-GCGGTGATC--------TGTTT--GGATCGCTTTGCGCAAGTGGGCGACTTCGGTTAGGACATTAAAG-GAAGTGACCTCTATTGGCGGTATGTTAGGC-------TTCG---------------------------------------GCCCGACTTTGCAGCTGACGGGGCGTTGTTTT--CTGTTCTTTCCTTGAGGTGTACCTGTC-----TTGTGTGAGGCAATGGTCTGGGCAAATGGTTATTGTGTA-GTAGAATGTTGC-------TGCTCCTGGGCGCC----------GTGTAATTCATTATATGGTAAAGAAGGCAAACACCAATTTGGGACAGCTTGTGGATTTAT---------------------------------------------------------------------------------------- 'Pythium conidiophorum UWA-BF03' ----------------------------------------------------------------------------------------------------------------------------------------------------------TCCACGTGAA-CCGTTAAAA-TTATGTTC-TGTGCCTTCT--CTCGG-GAGGGC-TGAACGAAGGTGGACTGCGATGCTTTATTGCGTCCCGGACTGCCGATGCTTTTTCAAACCC-ATTAC-CTAATACTGATCTATACTCCTAAAACGAAAGTTTTTGGTTTTA---ATCC-ATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCACATTGCACTTTCGGGTTATGCCTGGAAGTATGCTTGTATCAGTGTCCGTACATCCAACTTGCCTTTCTTG-TTTTGTGTAGTCAAA-GACGAGAGACGGCAGAATGTGAGGTGTCTCGC------TGGCTC----CCTCCTCGG-------AGGAGAAGACG-CGAGTCCCTTTAAATGTACGTTCGCTCTTTCTTGTGCCTGGGATTGAAGTGTGACTTTCGAAC-GCGGTGATC--------TGTTT--GGATCGCTTTGCGCGAGTGGGCGACTTCGGTTAGGACATTAAAG-GAAGTGACCTCTATTGGCGGTATGTTAGGC-------TTCG---------------------------------------GCCCGACGTTGCAGCTGACGGGGTGTTGTTTT--CTGTTCTTTCCTTGAGGTGTACCTGTC-----TTGTGTGAGGCAATGGT-TG{AG}GCTA-TGGTTATCGTGTA-GTAGAATTTTGC-------TGCTCCTGCGCGCC----------GTGTAATTTATTATATGGTAAAGAAGGCAAACACCAATTTGGGACAGCTTGCGGATTTATTCGCGAGCGCTTTTTTAATTGGACCTGATATCAAGTAAGACTACC------------------------------------------- 'Pythium conidiophorum UWA-BF04' ---------------------------------------------------------------------------------------------------------------------------------------------------------TTCCACGTGAA-CCGTTAAAA-TTATGTTC-TGTGCCTTCT--CTCGG-GAGGGC-TGAAC-AAGGTGGCCTGCGATGCTTTATTGCGTTTCGGACTGCCGATGCTTTTTCAAACCC-ATTAC-CTAATACTGATCTATACTCCTAAAACGAAAGTTTTTGGTTTTA---ATCC-ATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCACATTGCACTTTCGGGTTATGCCTGGAAGTATGCTTGTATCAGTGTCCGTACATCAAACTTGCCTTTCTTG-TTTTGTGTAGTCAA--GACGAGAGACGGCAGAATGTGAGGTGTCTCGC------TGGCTC----CCTCCTCGG-------AGGAGAAGACG-CGAGTCCCTTTAAATGTACGTTCGCTCTTTCTTGTGCCTGGGATTGAAGTGTGACTTTCGAAC-GCGGTGATC--------TGTTT--GGATCGCTTTGCGCGAGTGGGCGACTTCGGTTAGGACATTAAAG-GAAGTGACCTCTATTGGCGGTATGTTAGGC-------TTCG---------------------------------------GCCCGACTTTGCAGCTGACGGGGTGTTGTTTT--CTGTTCTTTCCTTGAGGTGTACCTGTC-----TTGTGTGAGGCAATGGTCTGGGCAAATGGTTATTGTGTA-GTAGAATGTTGC-------TGCTCCTGGGCGCC----------GTGTAATTCATTATATGGTAAAGAAGGCAAACACCAATTTGGGACAGCTTGTGGATTTATT--------------------------------------------------------------------------------------- 'Pythium conidiophorum UWA-L103' ----------------------------------------------------------------------------------------------------------------------------------------------------------TCCACGTGAA-CCGTTAAAA-TTATGTTC-TGTGCCTTCT--CTCGG-GAGGGC-TGAACGAAGGTGGCCTGCGATGCTTTATTGCGTTGCGGACTGCCGATGCTTTTTCAAACCC-ATTAC-CTAATACTGATCTATACTCCTAAAACGAAAGTTTTTGGTTTTA---ATCC-ATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCACATTGCACTTTCGGGTTATGCCTGGAAGTATGCTTGTATCAGTGTCCGTACATCAAACTTGCCTTTCTTG-TTTTGTGTAGTCAA--GACGAGAGACGGCAGAATGTGAGGTGTCTCGC------TGGCTC----CCTCCTCGG-------AGGAGAAGACG-CGAGTCCCTTTAAATGTACGTTCGCTCTTTCTTGTGCCTGGGATTGAAGTGTGACTTTCGAAC-GCGGTGATC--------TGTTT--GGATCGCTTTGCGCGAGTGGGCGACTTCGGTTAGGACATTAAAG-GAAGTGACCTCTATTGGCGGTATGTTAGGC-------TTCG---------------------------------------GCCCGACTTTGCAGCTGACGGGGTGTTGTTTT--CTGTTCTTTCCTTGAGGTGTACCTGTC-----TTGTGTGAGGCAATGGTCTGGGCAAATGGTTATTGTGTA-GTAGAATGTTGC-------TGCTCCTGGGCGCC----------GTGTAATTCATTATATGGTAAAGAAGGCAAACACCAATTTGGGACAGCTTGTGGATTT------------------------------------------------------------------------------------------ 'Pythium diclinum UWA-6R' ------------------------------------------------------------------------------------------------------------TAGGGTGAACCTGCGGAAGGATCATTTACCACACCAAAAAAAACTTTCCACGTGAAACCGTTGTAAACTATGTTC-TGTGCTCTCTT-CTCGGAGAGAGC-TGAACGAAGGTGGGCTGC---------TTAAATTGTAGTCTGC-GATGTACTTTTAAACCCCATTAAACTAATACTGAACTATACTCCGAAAACGAAAGTCTTTGGTTTTA---ATCA-ATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCACATTGCACTTTCGGGTTATGCCTGGAAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGCCTTTCTTT-TTTTGTGTAGTCAA--GAAGAGAGATGGCAGACTGTGAGGTGTCTCGC------TGACTC----CCTCTTCGG-------AGGAGAAGACG-CGAGTCCCTTTAAATGTACGTTCGCTCTTTCTTGTGTTTAAGAT-GAAGTGTGACTTTCGAAC-GCAGTGATC--------TGTTT--GGATCGCTTTGCTCGAGTGGGCGACTTCGGTTAGGACATTAAAG-GAAGCAACCTCTATTGGCGGTATGTTAGGC-------TTCG---------------------------------------GCCCGACTTTGCAGCTGACTGGA-GTTGTTTT--CTGTTCTTTCCTTGAGGTGTACCTGTC-----TTGTGTGAGGCAATGGTCTGGGCAAATGGTTATTGTGTA-GTAGGAAGTTGC-------TGCTCTTAAACGC------------TCTAGCTTCGTT-AGAGTAAAGGAGGCAG-CACCAATTTGGGATAG-TCGTTGATTTATCAATGGCGCTCTTTCTAATTGGAACCTGATTC-------------------------------------------------------- Pythium_intermedium_EF078693 --------------------------------------------------------------------------------CATTACCACACCTAAAAAACTTTCCACGTGAACTGTCATTATTTGTTGTGCGCTCTCTGCGGTG-TCGGTGGCGTCTGTTGGC-TGTATTTGATACTGCTGGC-GGGTGCGAGCCGGATGCA-GAGGC-TGAACGAAGGTCGAGTTGCTT-------TGC-TCTCGGCTGACTTA--TTTTTCAAACCCA-ATACCCAACTTACTGA-TTATACTGTGAGAACGAAAGTTCTTGCTTTTA---ACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAACCTTGCCTTTCTTCCTTCTGTGTAGTCAGT-GGAGGATGTG-GCAGA-CGTGAAGTGTCTCGCTGTGGCTGGTTTTTGGTCGTTTCGGCTA--TGAATACAGTTTG-CGAGTCCTTTTAAATGGACACGACTTTCTCTTTTTTGTTTCTGC-GAGGTGCTGTGCTCGAAC-GCGGTGGTT--------TTC----GGATCGCTCGCGGCTGT-TGGCGACTTCGGTGAATGCAT-TATG-GAGTGGACCTCGATTCGCGGTATGTTGGGC-------TTCG---------------------------------------GCTGGACAATGTTGCTTATTGTGTGTTTGTT---CCGCGTTCGCCTTGAGGTGTACTTTCT----GCTGTGTGCTTGAACTGGGATCTGCTTTGTTAGTAGTGCGCGGTGATCGTTATTCGCGGGGACATCTGTTGTTG--TG-CATGCTCTTAGTGTGTGC--TTGAGCAGAAGAGAGGTTTGAATTTGGGAAAG-TAGTGTACTGTGGCGTTAATCGCTGTGTGTACATCTCAATTGGACCTGATATCAGAC------------------------------------------- 'Pythium intermedium UWA-3B' ---------------------------------------------------------------------------------------------AAAAAACTTTCCACGTGAACCGTCATTATTTGTTGTGCGCTCTCTGCGGTG-TCGGTGGCGTCTGTTGGC-TGTATTTGATACTGCTGGC-GGGTGCGAGCCGGATGCA-GAGGC-TGAACGAAGGTCGAGTTGCTT-------TGC-TCTCGGCTGACTTA--TTTTTCAAACCCA-ATACCCAACTTACTGA-ATATACTGTGAGAACGAAAGTTCTTGCTTTTA---ACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAACCTTGCCTTTCTTCCTTCTGTGTAGTCAGT-GGAGGATGTG-GCAGA-CGTGAAGTGTCTCGCTGTGGCTGGTTTTTGGTCGTTTCGGCTA--TGAATACAGTTTG-CGAGTCCTTTTAAATGGACACGACTTTCTCTTTTTTGTTTCTGC-GAGGTGCTGTGCTCGAAC-GCGGTGGTT--------TTC----GGATCGCTCGCGGCTGT-TGGCGACTTCGGTGAATGCAT-TATG-GAGTGGACCTCGATTCGCGGTATGTTGGGC-------TTCG---------------------------------------GCTGGACAATGTTGCTTATTGTGTGTTTGTT---CCGCGTTCGCCTTGAGGTGTACTTTCT----GCTGTGTGCTTGAACTGGGATCTGCTTTGTTAGTAGTGCGCGGTGATCGTTATTCGCGGGGACATCTGTTGTTG--TG-CATGCTCTTAGTGTGTGC--TTGAGCAGAAGAGAGGTTTGAATTTGGGAAAG-TAGTGT---------------------------------------------------------------------------------------------- 'Pythium intermedium UWA-5B' ----------------------------------------------------------------------------------------------------------------------------GTTGTGCGCTCTCTGCGGTG-TCGGTGGCGTCTGTTGGC-TGTATTTGATACTGCTGGC-GGGTGCGAGCCGGATGCA-GAGGC-TGAACGAAGGTCGAGTTGCTT-------TGC-TCTCGGCTGACTTA--TTTTTCAAACCCA--TACCCAACTTACTGA-TTATACTGTGAGAACGAAAGTTCTTGCTTTTA---ACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAACCTTGCCTTTCTTCCTTCTGTGTAGTCAGT-GGAGGATGTG-GCAGA-CGTGAAGTGTCTCGCTGTGGCTGGTTTTTGGTCGTTTCGGCTA--TGAATACAGTTTG-CGAGTCCTTTTAAATGGACACGACTTTCTCTTTTTTGTTTCTGC-GAGGTGCTGTGCTCGAAC-GCGGTGGTT--------TTC----GGATCGCTCGCGGCTGT-TGGCGACTTCGGTGAATGCAT-TATG-GAGTGGACCTCGATTCGCGGTATGTTGGGC-------TTCG---------------------------------------GCTGGACAATGTTGCTTATTGTGTGTTTGTT---CCGCGTTCGCCTTGAGGTGTACTTTCT----GCTGTGTGCTTGAACTGGGATCTGCTTTGTTAGTAGTGCGCGGTGATCGTTATTCGCGGGGACATCTGTTGTTG--TG-CATGCTCTTAGTGTGTGC--TTGAGCAGAAGAGAGGTTTGAATTTGGGAAAG-TAGTGTACTGTGGCGTTAATCGCTGTGTGTACATCTCAATTGGACCTG---------------------------------------------------- 'Pythium intermedium UWA-L208' -------------------------------------------------------------------------------------------------AACTTTCCACGTGAACTGTCATTATTTGTTGTGCGCTCTCTGCGGTG-TCGGTGGCGTCTGTTGGC-TGTATTTGATACTGCTGGC-GGGTGCGAGCCGGATGCA-GAGGC-TGAACGAAGGTCGAGTTGCTT-------TGC-TCTCGGCTGACTTA--TTTTTCAAACCCA-ATACCCAACTTACTGA-TTATACTGTGAGAACGAAAGTTCTTGCTTTTA---ACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAACCTTGCCTTTCTTCCTTCTGTGTAGTCAGT-GGAGGATGTG-GCAGA-CGTGAAGTGTCTCGCTGTGGCTGGTTTTTGGTCGTTTCGGCTA--TGAATACAGTTTG-CGAGTCCTTTTAAATGGACACGACTTTCTCTTTTTTGTTTCTGC-GAGGTGCTGTGCTCGAAC-GCGGTGGTT--------TTC----GGATCGCTCGCGGCTGT-TG-CGACTTCGGTGAATGCAT-TATG-GAGTGGACCTCGATTCGCGGTATGTTGGGC-------TTCG---------------------------------------GCTGGACAATGTTGCTTATTGTGTGTTTGTT---CCGCGTTCGCCTTGAGGTGTACTTTCT----GCTGTGTGCTTGAACTGGGATCTGCTTTGTTAGTAGTGCGCGGTGATCGTTATTCGCGGGGACATCTGTTGTTG--TG-CATGCTCTTAGTGTGTGC--TTGAGCAGAAGAGAGGTTTGAATTTGGGAAAG-TAGTGTACTGTGGCGTTAATCGCTGTGTGTACATCTCAATTGGACCTGATATCT---------------------------------------------- 'Pythium intermedium UWA-M3801' ---------------------------------------------------------------------------------------------AAAAAACTTTCCACGTGAACTGTCATTATTTGTTGTGCGCTCTCTGCGGTG-TCGGTGGCGTCTGTTGGC-TGTATTTGATACTGCTGGC-GGGTGCGAGCCGGATGCA-GAGGC-TGAACGAAGGTCGAGTTGCTT-------TGC-TCTCGGCTGACTTA--TTTTTCAAACCCA-ATACCCAACTTACTGA-TTATACTGTGAGAACGAAAGTTCTTGCTTTTA---ACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCACAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCA-CCTTGCCTTTCTTCCTTCTGTGTAGTCAGT-GGAGGATGTG-GCAGA-CGTGAAGTGTCTCGCTGTGGCTGGTTTTTGGTCGTTTCGGCTA--TGAATACAGTTTG-CGAGTCCTTTTAAATGGACACGACTTTCTCTTTTTTGTTTCTGC-GAGGTGCTGTGCTCGAAC-GCGGTGGTT--------TTC----GGATCGCTCGCGGCTGT-TGGCGACTTCGGTGAATGCAT-TATG-GAGTGGACCTCGATTCGCGGTATGTTGGGC-------TTCG---------------------------------------GCTGGACAATGTTGCTTATTGTGTGTTTGTT---CCGCGTTCGCCTTGAGGTGTAATT-CT----GCTGTGTGCTTGAACTGGGATCTGCTTTGTTAGTAGTGCGCGGTGATCGTTATTCGCGGGGACATCTGTTGTTG--T--CATGCTCTTAGTGTGTGC--TTGAGCAGAAGAGAGGTTTGAATTTGGGAAAG-TAGTG----------------------------------------------------------------------------------------------- Pythium_irregulare_EU240169 GGATCATTACCACACCTAAAAAAACTTTCCACGTGAACTGTCGTTATTTGTTGTGTGTGTGCGTGTTGGTAGCATGCGTG--TTTGCTTACGCTTTGGTGTTTGCGAGTGTGTGTGT---TGTCGGTGCGCAAACTGAACGAAGGTCGTGTGTTGCTGTGTGT--CTGCTGTACTGCTGACTT-TGCATTGATTTGCATGGTGTTGGCAGGAGCGGCGGGTG--CTGT-TG------CAT-GCGCGGCTGACCTATTTTTTTCAAACCCC-ATACCTAAATGACTGA-TTATACTGTGAGAACGAAAGTTCTTGCTTTTA---ACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAAACTTGCGTTTCTTCCTTCCGTGTAGTCGGT-GGAGGAGAGTTGCAGA-TGTGAAGTGTCTCGCTGTGGTTGGTGTTTGTTGTTTGCAATGA---ATGCACAGCTTG-CGAGTCCTTTTAAATGGACACGACTTTCTCTTTTTTGTATGTGC-GCGGTGCTGTGCGTGAAC-GCGGTGGTT--------TTC----GGATCGCTCGCGGCTGT-CGGCGACTTCGGTGAATGCAT-AATG-GAGTGGACCTCGATTCGCGGTATGTTGGGC-------TTCG---------------------------------------GCTGGACAATGTTGCTTATTGTGTGTCTGTT---CCGTGTTCGCCTTGAGGTGTACTG----ATGGCTGTGGGATTGAACTGGTTACTGT--TGTTAGTAGTGTGTGTAGCACGTTGT-CGTGGATGCATCTGTGTTTT--TGCAT--ACTTGTGTGTGTGCAATTGTACAGAAGAGGAGTCTCAATTTGGGAAAAGTTTTGTATACTCCGGGTTGATCCTGCGTGTATATCTCAATTGGACCTGATATCAGACAAGACT------------------------------------- Pythium_irregulare_EU240172 GGATCATTACCACACCTAAAAAAACTTTCCACGTGAACTGTCGTTATTTGTTGTGTGTGTGCGTGTTGGTAGCATGCGTG--TTTGCTTACGCTTTGGTGTTTGCGAGTGTGTGTGT---TGTCGGTGCGCAAACTGAACGAAGGTCGTGTGTTGCTGTGTGT--CTGCTGTACTGCTGACTT-TGCATTGATTTGCATGGTGTTGGCAGGAGCGGCGGGTG--CTGT-TG------CAT-GCGCGGCTGACCTATTTTTTTCAAACCCC-ATACCTAAATGACTGA-TTATACTGTGAGAACGAAAGTTCTTGCTTTTA---ACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAAACTTGCGTTTCTTCCTTCCGTGTAGTCGGT-GGAGGAGAGTTGCAGA-TGTGAAGTGTCTCGCTGTGGTTGGTGTTTGTTGTTTGCAATGA---ATGCACAGCTTG-CGAGTCCTTTTAAATGGACACGACTTTCTCTTTTTTGTATGTGC-GCGGTGCTGTGCGTGAAC-GCGGTGGTT--------TTC----GGATCGCTCGCGGCTGT-CGGCGACTTCGGTGAATGCAT-AATG-GAGTGGACCTCGATTCGCGGTATGTTGGGC-------TTCG---------------------------------------GCTGGACAATGTTGCTTATTGTGTGTCTGTT---CCGTGTTCGCCTTGAGGTGTACTG----ATGGCTGTGGGATTGAACTGGTTACTGT--TGTTAGTAGTGTGTGTAGCACGTTGT-CGTGGATGCATCTGTGTTTT--TGCAT--ACTTGTGTGTGTGCAATTGTACAGAAGAGGAGTCTCAATTTGGGAAAAGTTTTGTATACTCCGGGTTGATCCTGCGTGTATATCTCAATTGGACCTGATATCAGACAAGACT------------------------------------- 'Pythium irregulare UWA-1B' ----------CACACCTAAAAAATCTTTCCACGTGAACTGTCGTTATTTGTTGTGTGTGTGCGTGTTGGTAGCATGCGTG--TTTGCTTACGCTTTGGTGTTTGCGAGTGTGTGTGT---TGTCGGTGCGCAAACTGAACGAAGGTCGTGTGTTGCTGTGTGT--CTGCTGTACTGCTGACTT-TGCATTGATTTGCATGGTGTTGGCAGGAGCGGCGGGTG--CTGT-TG------CAT-GCGCGGCTGACCTATTTTTTTCAAACCCC-ATACCTAAATGACTGA-TTATACTGTGAGAACGAAAGTTCTTGCTTTTA---ACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCGCTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAAACTTGCGTTTCTTCCTTCCGTGTAGTCGGT-GGAGGAGAGTTGCAGA-TGTGAAGTGTCTCGCTGTGGTTGGTGTTTGTTGTTTGCAATGA---ATGCACAGCTTG-CGAGTCCTTTTAAATGGACACGACTTTCTCTTTTTTGTATGTGC-GCGGTGCTGTGCGTGAAC-GCGGTGGTT--------TTC----GGATCGCTCGCGGCTGT-CGGCGACTTCGGTGAATGCAT-AATG-GAGTGGACCTCGATTCGCGGTATGTTGGGC-------TTCG---------------------------------------GCTGGACAATGTTGCTTATTGTGTGTCTGTT---CCGTGTTCGCCTTGAGGTGTACTG----ATGGCTGTGGGATTGAACTGGTTACTGT--TGTTAGTAGTGTGTGTAGCACGTTGT-CGTGGATGCATCTGTGTTTT--TGCAT--ACTTGTGTGTGTGCAATTGTACAGAAGAGG??--------------------------------------------------------------------------------------------------------------------- 'Pythium irregulare UWA-2B' ----------------------------------------------------GTGTGTGAGCGTGTTGGTAGCATGCTTG--TTTGCTTACGCTTTGGTGTTTGCGAGTGTGTGTGT---TGTCGGTGCGCAAACTGAACGAAGGTCGTGTGTTGCTGTGTGT--CTGCTGTACTGCTGACTT-TGCATTGATTTGCATGGTGTTGGCAGGAGCGGCGGGTG--CTGT-TG------CAT-GCGCGGCTGACCTATTTTTTTCAAACCCC-ATACCTAAATGACTGA-TTATACTGTGAGAACGAAAGTTCTTGCTTTTA---ACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAAACTTGCGTTTCTTCCTTCCGTGTAGTCGGT-GGAGGAGAGTTGCAGA-TGTGAAGTGTCTCGCTGTGGTTGGTGTTTGTTGTTTGCAATGA---ATGCACAGCTTG-CGAGTCCTTTTAAATGGACACGACTTTCTCTTTTTTGTATGTGC-GCGGTGCTGTGCGTGAAC-GCGGTGGTT--------TTC----GGATCGCTCGCGGCTGT-CGGCGACTTCGGTGAATGCAT-AATG-GAGTGGACCTCGATTCGCGGTATGTTGGGC-------TTCG---------------------------------------GCTGGACAATGTTGCTTATTGTGTGTCTGTT---CCGTGTTCGCCTTGAGGTGTACTG----ATGGCTGTGGGATTGAACTGGTTACTGT--TGTTAGTAGT-TGTGTAGCACGTTGT-CGTGGATGCATCTGTGTTTT--TGCAT--ACTTGTGTGTGTGCAATTGTACAGAAGAGGAGTCTCAATTTGGGAAAAGTTTTGTATACTCC??------------------------------------------------------------------------------------- 'Pythium irregulare UWA-L303' --------ACCACACCTAAAAAAACTTTCCACGTGAACTGTCGTTATTTGTTGTGTGTGTGCGTGTTGGTAGCATGCGTG--TTTGCTTACGCTTTGGTGTTTGCGAGTGTGTGTGT---TGTCGGTGCGCAAACTGAACGAAGGTCGTGTGTTGCTGTGTGT--CTGCTGTACTGCTGACCT-TGCATTGATTTGCATGGTGTTGGCAGGAGCGGCGGGTG--CTGT-TG------CAT-GCGCGGCTGACCTATTTTTTTCAAACCCC-ATACCTAAATGACTGA-TTATACTGTGAGAACGAAAGTTCTTGCTTTTA---ACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTC-GTATCAGTGTCCGTAAATCAAACTTGCGTTTCTTCCTTCCGTGTAGTCGGT-GGAGGAGAGTTGCAGA-TGTGAAGTGTCTCGCTGTGGTTGGTGTTTGTTGTTTGCAATGA---ATGCACAGCTTG-CGAGTCCTTTTAAATGGACACGACTTTCTCTTTTTTGTATGTGC-GCGGTGCTGTGCGTGAAC-GCGGTGGTT--------TTC----GGATCGCTCGCGGCTGT-CGGCGACTTCGGTGAATGCAT-AATG-GAGTGGACCTCGATTCGCGGTATGTTGGGC-------TTCG---------------------------------------GCTGGACAATGTTGCTTATTGTGTGTCTGTT---CCGTGTTCGCCTTGAGGTGTACTG----ATGGCTGTGGGATTGAACTGGTTACTGT--TGTTAGTAGTGTGTGTAGCACGTTGT-CGTGGATGCATCTGTGTTTT--TGCAT--ACTTGTGTGTGTGCAATTGTACAGAAGAGGAGTCTCAATTTGGGAAAAGTTTTGTATACTCCGGGTTGC-------------------------------------------------------------------------------- 'Pythium irregulare UWA-L406' --------------CCTAAAAAAACTTTCCACGTGAACTGTCGTTATTTGTTGTGTGTGTGCGTGTTGGTAGCATGCGTG--TTTGCTTACGCTTTGGTGTTTGCGAGTGTGTGTGT---TGTCGGTGCGCAAACTGAACGAAGGTCGTGTGTTGCTGTGTGT--CTGCTGTACTGCTGACTT-TGCATTGATTTGCATGGTGTTGGCAGGAGCGGCGGGTG--CTGT-TG------CAT-GCGCGGCTGACCTATTTTTTTCAAACCCC-ATACCTAAATGACTGA-TTATACTGTGAGAACGAAAGTTCTTGCTTTTA---ACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAAACTTGCGTTTCTTCCTTCCGTGTAGTCGGT-GGAGGAGAGTTGCAGA-TGTGAAGTGTCTCGCTGTGGTTGGTGTTTGTTGTTTGCAATGA---ATGCACAGCTTG-CGAGTCCTTTTAAATGGACACGACTTTCTCTTTTTTGTATGTGC-GCGGTGCTGTGCGTGAAC-GCGGTGGTT--------TTC----GGATCGCTCGCGGCTGT-CGGCGACTTCGGTGAATGCAT-AATG-GAGTGGACCTCGATTCGCGGTATGTTGGGC-------TTCG---------------------------------------GCTGGACAATGTTGCTTATTGTGTGTCTGTT---CCGTGTTCGCCTTGAGGTGTACTG----ATGGCTGTGGGATTGAACTGGTTACTGT--TGTTAGTAGTGTGTGTAGCACGTTGT-CGTGGATGCATCTGTGTTTT--TGCAT--ACTTGTGTGTGTGCAATTGTACAGAAGAGGAGTCTCA---------------------------------------------------------------------------------------------------------------- 'Pythium irregulare UWA-M2102' -------------------------------------------------GTTGTGTGTGTGCGTGTTGGTAGCATGCGTG--TTTGCTTACGCTTTGGTGTTTGCGAGTGTGTGTGT---TGTCGGTGCGCAAACTGCACGAAGGTCGTGTGTTGCTGTGTGT--CTGCTGTACTGCTGACTT-TGCATTGATTTGCATGGTGTTGGCAGGAGCGGCGGGTG--CTGT-TG------CAT-GCGCGGCTGACCTATTTTTTTCAAACCCC-ATACCTAAATGACTGA-TTATACTGTGAGAACGAAAGTTCTTGCTTT-A---ACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAAACTTGCGTTTCTTCCTTCCGTGTAGTCGGT-GGAGGAGAGTTGCAGA-TGTGAAGTGTCTCGCTGTGGTTGGTGTTTGTTGTTTGCAATGA---ATGCACAGCTTG-CGAGTCCTTTTAAATGGACACGACTTTCTCTTTTTTGTATGTGC-GCGGTGCTGTGCGTGAAC-GCGGTGGTT--------TTC----GGATCGCTCGCGGCTGT-CGGCGACTTCGGTGAATGCAT-AATG-GAGTGGACCTCGATTCGCGGTATGTTGGGC-------TTCG---------------------------------------GCTGGACAATGTTGCTTATTGTGTGTCTGTT---CCGTGTTCGCCTTGAGGTGTACTG----ATGGCTGTGGGATTGAACTGGTTACTGT--TGTTAGTAGTGTGTGTAGCACGTTGT-CGTGGATGCATCTGTGTTTT--TGCAT--ACTTGTGTGTGTGCAATTGTACAGAAGAGG----------------------------------------------------------------------------------------------------------------------- 'Pythium irregulare UWA-WAC714' -----------------------ACTTTCCACGTGAACTGTCGTTATTTGTTGTGTGTGTGCGTGTTGGTAGCATGCGTG--TTTGCTTACGCTTTGGTGTTTGCGAGTGTGTGTGT---TGTCGGTTCGCAAACTGAACGAAGGTCGTGTGTTGCTGTGTGT--CTGCTGTACTGCTGACTT-TGCATTGATTTGCATGGTGTTGGCAGGAGCGGCGGGTG--CTGT-TG------CAT-GCGCGGCTGACCTACTTTTTTCAAACCCC-ATACCTAAATGACTGA-TTATACTGTGAGAACGAAAGTTCTTGCTTTTA---ACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAAACTTGCGTTTCTTCCTTCCGTGTAGTCGGT-GGAGGAGAGTTGCAGA-TGTGAAGTGTCTCGCTGTGGTTGGTGTTTGTTGTTTGCAATGA---ATGCACAGCTTG-CGAGTCCTTTTAAATGGACACGACTTTCTCTTTTTTGTATGTGC-GCGGTGCTGTGCGTGAAC-GCGGTGGTT--------TTC----GGATCGCTCGCGGCTGT-CGGCGACTTCGGTGAATGCAT-AATG-GAGTGGACCTCGATTCGCGGTATGTTGGGC-------TTCG---------------------------------------GCTGGACAATGTTGCTTATTGTGTGTCTGTT---CCGTGTTCGCCTTGAGGTGTACTG----ATGGCTGTGGGATTGAACTGGTTACTGT--TGTTAGTAGTGTGTGTAGCACGTTGT-CGTGGATGCATCTGTGTTTT--TGCAT--ACTTGTGTGTGTGCAATTGTACAGAAGAGGAGTCTCAATTTGGGAAAAGTTTTGTATACTCCG-------------------------------------------------------------------------------------- Pythium_lutarium_EU240086 ----------------------------------------------------------------------------------------------------------TCCGTAGGTGAACCTGCGGAAGGATCATTACCACACCAAAAAAA-CTTTCCACGTGAA-CCGTTGTAA-CTATGTTC-TGTGCTCTCTT-CTCGGAGAGAGC-TGAACGAAGGTGGGCTGC---------TTAA-TTGTAGTCTGCCGATGTACTTTTAAACCC-ATTAAACTAATACTGAACTATACTCCGAAAACGAAAGTCTTTGGTTTTA---ATCA-ATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCACATTGCACTTTCGGGTTATGCCTGGAAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGCCTTTCTTT-TTTTGTGTAGTCAA--GAAGAGAGATGGCAGACTGTGAGGTGTCTCGC------TGACTC----CCTCTTCGG-------AGGAGAAGACG-CGAGTCCCTTTAAATGTACGTTCGCTCTTTCTTGTGTTTAAGAT-GAAGTGTGACTTTCGAGC-GCAGTGATC--------TGTTT--GGATCGCTTTGCTCGAGTGGGCGACTTCGGTTAGGACATTAAAG-GAAGCAACCTCTATTGGCGGTATGTTAGGC-------TTCG---------------------------------------GCCCGACTTTGCAGCTGACTGGA-GTTGTTTT--CTGTTCTTTCCTTGAGGTGTACCTGTC-----TTGTGTGAGGCAATGGTCTGGGCAAATGGTTATTGTGTA-GTAGGAAGTTGC-------TGCTCTTAAGCGC------------TCTAGCTTCGGTTAGAGTAAAGGAGGCAA-CACCAATTTGGGATAG-TCGTTGATTTATCAATGGCGCTCTTTCTAATTGGACCTGATATCAGGCAAGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA----------- Pythium_lutarium_JQ898467 ----------------------------------------------------------------------------------------------CGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTACCACACCAAAAAAA-CTTTCCACGTGAA-CCGTTGTAA-CTATGTTC-TGTGCTCTCTT-CTCGGAGAGAGC-TGAACGAAGGTGGGCTGC---------TTAA-TTGTAGTCTGCCGATGTACTTTTAAACCC-ATTAAACTAATACTGAACTATACTCCGAAAACGAAAGTCTTTGGTTTTA---ATCA-ATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCACATTGCACTTTCGGGTTATGCCTGGAAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGCCTTTCTTT-TTTTGTGTAGTCAA--GAAGAGAGATGGCAGACTGTGAGGTGTCTCGC------TGACTC----CCTCTTCGG-------AGGAGAAGACG-CGAGTCCCTTTAAATGTACGTTCGCTCTTTCTTGTGTTTAAGAT-GAAGTGTGACTTTCGAAC-GCAGTGATC--------TGTTT--GGATCGCTTTGCTCGAGTGGGCGACTTCGGTTAGGACATTAAAG-GAAGCAACCTCTATTGGCGGTATGTTAGGC-------TTCG---------------------------------------GCCCGACTTTGCAGCTGACTGGA-GTTGTTTT--CTGTTCTTTCCTTGAGGTGTACCTGTC-----TTGTGTGAGGCAATGGTCTGGGCAAATGGTTATTGTGTA-GTAGGAAGTTGC-------TGCTCTTAAGCGC------------TCTAGCTTCGGTTAGAGTAAAGGAGGCAA-CACCAATTTGGGATAG-TCGTTGATTTATCAATGGCGCTCTTTCTAATTGGACCTGATATCAGGCAAGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAAGAAACAA 'Pythium lutarium UWA-BF01' ---------------------------------------------------------------------------------------------------------------------------------------------------AAA-CTTTCCACGTGAA-CCGTTGTAA-CTATGTTC-TGTGCTCTCTT-CTCGGAGAGAGC-TGAACGAAGGTGGGCTGC---------TTAA-TTGTAGTCTGCCGATGTACTTTTAAACCC-ATTAAACTAATACTGAACTATACTCCGAAAACGAAAGTCTTTGGTTTTA---ATCA-ATAACAACTTTCAG-AGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCACATTGCACTTTCGGGTT-TGCCTGGAACTATGCCTGTATCAGTGTCCGTACATCAAACTTGCCTTTCTTT-TTTTGTGTAGTCAA--GAAGAGAGATGGCAGACTGTGAGGTGTCTCGC------TGACTC----CCTCTTCGG-------AGGAGAAGACG-CGAGTCCCTTTAAATGTACGTTCGCTCTTTCTTGTGTTTAAGAT-GAAGTGTGACTTTCGAAC-GCAGTGATC--------TGTTT--GGATCGCTTTGCTCGAGTGGGCGACTTCGGTTAGGACATTAAAG-GAAGCAACCTCTATTGGCGGTATGTTAGGC-------TTCG---------------------------------------GCCCGACTTTGCAGCTGACTGGA-GTTGTTTT--CTGTTCTTTCCTTGAGGTGTACCTGTC-----TTGTGTGAGGCAATGGTCTGGGCAAATGGTTATTGTGTA-GTAGGAAGTTGC-------TGCTCTTAAGCGC------------TCTAGCTTCGGTTAGAGTAAAGGAGGCAA-CACCAATTTGGGATAG-TCGTTGATTTATCAATGGCGCTCTTTCTAATTGGACCTGATATCAGGCAAGACTACCCG----------------------------------------- 'Pythium lutarium UWA-L202' ----------------------------------------------------------------------------------------------------------------------------------------CCACACCAAA-AAA-CTTTCCACGTGAA-CCGTTGTAA-CTATGTTC-TGTGCTCTCTT-CTCGGAGAGAGC-TGAACGAAGGTGG---------------TAA-TTGTAGTCTGCCGATGTACATTTAAACCC-ATTAAACTAATACTGAACTATACTCCGAAAACGAAAGTCTTTGGTTTTA---ATCA-ATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCACATTGCACTTTCGGGTTATGCCTGGAAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGCCTTTCTTT-TTTTGTGTAGTCAA--GAAGAGAGATGGCAGACTGTGAGGTGTCTCGC------TGACTC----CCTCTTCGG-------AGGAGAAGACG-CGAGTCCCTTTAAATGTACGTTCGCTCTTTCTTGTGTTTAAGAT-GAAGTGTGACTTTCGAAC-GCAGTGATC--------TGTTT--GGATCGCTTTGCTCGAGTGGGCGACTTCGGTTAGGACATTAAAG-GAAGCAACCTCTATTGGCGGTATGTTAGGC-------TTCG---------------------------------------GCCCGACTTTGCAGCTGACTGGA-GTTGTTTT--CTGTTCTTTCCT-GAGGTGTACCTGTC-----TTGTGTGAGGCAATGGTCTGGGCAAATGGTTATTGTGTA-GTAGGAAGTTGC-------TGCTCTTAAGCGC------------TCTAGCTTCGGTTAGAGTAAAGGAGGCAA-CACCAATTTGGGATAG-TCGTTGATTTATCAATGGCGCTCTTTCTAATTGGACCTGATATCAGGCAAGACTACCCGCTG-------------------------------------- 'Pythium lutarium UWA-L207' ------------------------------------------------------------------------------------------------------------------------------------------------AAAAAA-CTTTCCACGTGAA-CCGTTGTAA-CTATGTTC-TGTGCTCTCTT-CTCGGAGAGAGC-TGAACGAAGGTGGGCTGC---------TTAA-TTGTAGTCTGCCGATGTACTTTTAAACCC-ATTAAACTAATACTGAACTATACTCCGAAAACGAAAGTCTTTGGTTTTA---ATCA-ATAACAACTT-CAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCACATTGCACTTTCGGGTTATGCCTGGAAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGCCTTTCTTT-TTTTGTGTAGTCAA--GAAGAGAGATGGCAGACTGTGAGGTGTCTCGC------TGACTC----CCTCTTCGG-------AGGAGAAGACG-CGAGTCCCTTTAAATGTACGTTCGCTCTTTCTTGTGTTTAAGAT-GAAGTGTGACTTTCGAAC-GCAGTGATC--------TGTTT--GGATCGCTTTGCTCGAGTGGGCGACTTCGGTTAGGACATTAAAG-GAAGCAACCTCTATTGGCGGTATGTTAGGC-------TTCG---------------------------------------GCCCGACTTTGCAGCTGACTGGA-GTTGTTTT--CTGTTCTTTCCTTGAGGTGTAC-TGTC-----TTGTGTGAGGCAATGGTCTGGGCAAATGGTTATTGTGTA-GTAGGAAGTTGC-------TGCTCTTAAGCGC------------TCTAGCTTCGGTTAGAGTAAAGGAGGCAA-CACCAATTTGGGATAG-TCGTTGATTTATCAATGGCGCA------------------------------------------------------------------------------ 'Pythium lutarium UWA-L401' -------------------------------------------------------------------------------------------------------GTTTCCGTAGGTGAACCTGCGGAAGGATCATTACCACACCAAAAAAA-CTTTCCACGTGAA-CCGTTGTAA-CTATGTTC-TGTGCTCTCTT-CTCGGAGAGAGC-TGAACGAAGGTGGGCTGC---------TTAA-TTGTAGTCTGCCGA-GTACTTTTAAACCC-ATTAAACTAATACTGAACTATACTCCGAAAACGAAAGTCTTTGGTTTTA---ATCA-ATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGACGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCACATTGCACTTTCGGGTTATGCCTGGAAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGCCTTTCTTT-TTTTGTGTAGTCAA--GAAGAGAGATGGCAGACTGTGAGGTGTCTCGC------TGACTC----CCTCTTCGG-------AGGAGAAGACG-CGAGTCCCTTTAAATGTACGTTCGCTCTTTCTTGTGTTTAAGAT-GAAGTGTGACTTTCGAAC-GCAGTGATC--------TGTTT--GGATCGCTTTGCTCGAGTGGGCGACTTCGGTTAGGACATTAAAG-GAAGCAACCTCTATTGGCGGTATGTTAGGC-------TTCG---------------------------------------GCCCGACTTTGCAGCTGACTGGA-GTTGTTTT--CTGTTCTTTCCTTGAGGTGTACCTGTC-----TTGTGTGAGGCAATGGTCTGGGCAAATGGTTATTGTGTA-GTAGGAAGTTGC-------TGCTGTTAAGCGC------------TCTAGCTTCGGTTAGAGTAAAGGAGGCAA-CACCAATTTGGGATAG-TCGTTGATTTATCAAT------------------------------------------------------------------------------------ 'Pythium lutarium UWA-L405' ---------------------------------------------------------------------------------------------------------------------------------------------CCAAAAAAA-CTTTCCACGTGAA-CCGTTGTAA-CTATGTTC-TGTGCTCTCTT-CTCGGAGAGAGC-TGAACGAAGGTGGGCTGC---------TTAA-TTGTAGTCTGCCGATGTACTTTTAAACCC-ATTAAACTAATACTGAACTATACTCCGAAAACGAAAGTCTTTGGTTTTA---ATCA-ACAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCACATTGCACTTTCGGGTTATGCCTGGAAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGCCTTTCTTT-TTTTGTGTAGTCAA--GAAGAGAGATGGCAGACTGTGAGGTGTCTCGC------TGACTC----CCTCTTCGG-------AGGAGAAGACG-CGAGTCCCTTTAAATGTACGTTCGCTCTTTCTTGTGTTTAAGAT-GAAGTGTGACTTTCGAAC-GCACTGATC--------TGTTT--GGATCGCTTTGCTCGAGTGGGCGACTTCGGTTAGGACATTAAAG-GAAGCAACCTCTATTGGCGGTATGTTAGGC-------TTCG---------------------------------------GCCCGACTTTGCAGCTGACTGGA-GTTGTTTT--CTGTTCTTTCCTTGAGGTGTACCTGTC-----TTGTGTGAGGCAATGGTCTGGGCAAATGGTTATTGTGTA-GTAGGAAGTTGC-------TGCTCTTAAGCGC------------TCTAGCTTCGGTTAGAGTAAAGGAGGCAA-CACCAATTTGGGATAG-TCGTTGATTT------------------------------------------------------------------------------------------ Pythium_mamillatum_DQ525086 ---------CCACACCTAAAAAA-CTTTCCACGTGAACTGTCGTTATTTGTTGTGTGTGTGCGCGTTGCTGGCGTGCGTGCGTTTGCTTACGCTTCGGTGTTTGCGAGTGTGCGCGTGC-TGGCGGTGCGCGGACTGAACGAAGGTCGTGTGTTGCTGTGTGTGCCTGCTGCACCGCTGACTT-TGCATTGATTTGCATGGTGTTGGC-GGAGCGGCGGGTGTGCTGTGCG------TGC-GCGCGGCTGACTTA-TTTTTTCAAACCCG-ATACCTAAATGACTGA-TTATACTGTGAGAACGAAAGTTCTTGCTTTAA---ACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAAACTTGCGTTTCTTCCTTCCGTGTAGTCGGT-GGAGGAGAGTTGCAGA-TGTGAAGTGTCTCGCTGTGGTTGGCGTTCGTTGTTTGTAATGATGAATGCACAGCTTG-CGAGTCCTTTTAAATGGACAC?ACTTTCTC{GT}TTTTTGTATCTGC-GCGGTGCTGTGCGTGAAC-GCGGTGGTT--------TTC----GGATCGCTCGCGGCTGT-CGGCGACTTCGGTGAATGCAT-GATG-GAGTGGACCTCGATTCGCGGTATGTTGGGC-------TTCG---------------------------------------GCTGGACAATGTTGCTTATTGTGTGTTTGTT---CCGTGTTCGCCTTGAGGTGTACTG----GTGGCTGTGGGATTGAACTGGTTGCTGT--TGTTAGTAGT--GTGTGGCGCGTTGT-CGTGGGTGCATCTGTGTTTCTGCGCATTCATTCGTGTGTGTGCAGTTG-GCAGAAGAGGAGTCTCAATTTGGGAAA---TCAGTGTACTCGAGGTTGATCCTGCGTGTATATCTCAA------------------------------------------------------------- Pythium_mamillatum_DQ528753 ---------CCACACCTAAAAAA-CTTTCCACGTGAACTGTCGTTATTTGTTGTGTGTGTGCGCGTTGCTGGCGTGCGTGCGTTTGCTTACGCTTCGGTGTTTGCGAGTGTGCGCGTGC-TGGCGGTGCGCGGACTGAACGAAGGTCGTGTGTTGCTGTGTGTGCCTGCTGCACCGCTGACTT-TGCATTGATTTGCATGGTGTTGGC-GGAGCGGCGGGTGTGCTGTGCG------TGC-GCGCGGCTGACTTA-TTTTTTCAAACCCG-ATACCTAAATGACTGA-TTATACTGTGAGAACGAAAGTTCTTGCTTTAA---ACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAAACTTGCGTTTCTTCCTTCCGTGTAGTCGGT-GGAGGAGAGTTGCAGA-TGTGAAGTGTCTCGCTGTGGTTGGCGTTCGTTGTTTGTAATGATGAATGCACAGCTTG-CGAGTCCTTTTAAATGGACAC?ACTTTCTC{GT}TTTTTGTATCTGC-GCGGTGCTGTGCGTGAAC-GCGGTGGTT--------TTC----GGATCGCTCGCGGCTGT-CGGCGACTTCGGTGAATGCAT-GATG-GAGTGGACCTCGATTCGCGGTATGTTGGGC-------TTCG---------------------------------------GCTGGACAATGTTGCTTATTGTGTGTTTGTT---CCGTGTTCGCCTTGAGGTGTACTG----GTGGCTGTGGGATTGAACTGGTTGCTGT--TGTTAGTAGT--GTGTGGCGCGTTGT-CGTGGGTGCATCTGTGTTTCTGCGCATTCATTCGTGTGTGTGCAGTTG-GCAGAAGAGGAGTCTCAATTTGGGAAA---TCAGTGTACTCGAGGTTGATCCTGCGTGTATATCTCAA------------------------------------------------------------- 'Pythium mamillatum UWA-L106' ---------------------------------------------------------TGTGC-CGTTGCTGGCGTGCGTGCGTTTGCTTACGCTTCGGTGTTTGCGAGTGTGCGCGTGC-TGGCGGTGCGCGGACTGAACGAAGGTCGTGTGTTGCTGTGTGTGCCTGCTGCACCGCTGACTT-TGCATTGATTTGCATGGTGTTGGC-GGAGCGGCGGGTGTGCTGTGCG------TGC-GTGCGGCTGACTTA-TTTTTTCAAACCCG-ATACCTAAATGACTGA-TTATACTGTGAGAACGAAAGTTCTTGCTTTAA---ACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTAAATCAAACTTGCGTTTCTTCCTTCCGTGTAGTCGGT-GGAGGAGAGTTGCAGA-TGTGAAGTGTCTCGCTGTGGTTGGCGTTCGTTGTTTGTAATGATGAATGCACAGCTTG-CGAGTCCTTTTAAATGGACAC?ACTTTCTC{GT}TTTTTGTATCTGC-GCGGTGCTGTGCGTGAAC-GCGGTGGTT--------TTC----GGATCGCTCGCGGCTGT-CGGCGACTTCGGTGAATGCAT-GATG-GAGTGGACCTCGATTCGCGGTATGTTGGGC-------TTCG---------------------------------------GCTGGACAATGTTGCTTATTGTGTGTTTGTT---CCGTGTTCGCCTTGAGGTGTACTG----GTGGCTGTGGGATTGAACTGGTTGCTGT--TGTTAGTAGT--GTGTGGCGCGTTGT-CGTGGGTGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------ 'Pythium mamillatum UWA-L302' ---------CCACACCTAAAAAA-CTTTCCACGTGAACTGTCGTTATTTGTTGTGTGTGTGCGCGTTGCTGGCGTGCGTGCGTTTGCTTACGCTTCGGTGTTTGCGAGTGTGCGCGTGC-TGGCGGTGCGCGGACTGAACGAAGGTCGTGTGTTGCTGTGTGTGCCTGCTGCACCGCTGACTT-TGCATTGATTTGCATGGTGTTGGC-GGAGCGGCGGGTGTGCTGTGCG------TGC-GCGCGGCTGACTTA-TTTTTTCAAACCCG-ATACCTAAATGACTGA-TTATACTGTGAGAACGAAAGTTCTTGCTTTAA---ACTAGATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTATGCCTGGAAGTATGTCTGTATCACTGTCCGTAAATCAAACTTGCGTTTCTTCCTTCCGTGTAGTCGGT-GGAGGAGAGTTGCAGA-TGTGAAGTGTCTCGCTGTGGTTGGCGTTCGTTGTTTGTAATGATGAATGCACAGCTTG-CGAGTCCTTTTAAATGGACAC?ACTTTCTC{GT}TTTTTGTATCTGC-GCGGTGCTGTGCGTGAAC-GCGGTGGTT--------TTC----GGATCGCTCGCGGCTGT-CGGCGACTTCGGTGAATGCAT-GATG-GAGTGGACCTCGATTCGCGGTATGTTGGGC-------TTCG---------------------------------------GCTGGACAATGTTGCTTATTGTGTGTTTGTT---CCGTGTTCGCCTTGAGGTGTACTG----GTGGCTGTGGGATTGAACTGGTTGCTGT--TGTTAGTAGT--GTGTGGCGCGTTGT-CGTGGGTGCATCTGTGTTTT--CGCATTCATTCGTGTGTGTGCAGTTG-GCAGAAGAGGAGTC------------------------------------------------------------------------------------------------------------------- Pythium_pachycaule_EF583439 ----------------------------------------------------------------------------------------------------------------------------------------CCACACCAAAAAA--CTTTCC-CGTGAA-CCGTTGTAA-CTATGTTC-TGTGCTCTCT--CTCGG-GAGGGC-TGAACGAAGGTGGGCTGC---------TTAA-TTGTAGTCTGCCGATGTACTTTTAAACCC-ATTAAACTAATACTGAACTATACTCCGAAAACGAAAGTCTTTGGTTTTA---ATCA-ATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCACATTGCACTTTCGGGTTATGCCTGGAAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGCCTTTCTTT-TTTTGTGTAGTCAA--GAAGAGAGATGGCAGACTGTGAGGTGTCTCGC------TGACTC----CCTCTTCGG-------AGGAGAAGACG-CGAGTCCCTTTAAATGTACGTTCGCTCTTTCTTGTGTTTAAGAT-GAAGTGTGACTTTCGAAC-GCAGTGATC--------TGTTT--GGATCGCTTTGCTCGAGTGGGCGACTTCGGTTAGGACATTAAAG-GAAGCAACCTCTATTGGCGGTATGTTAGGC-------TTCG---------------------------------------GCCCGACTTTGCAGCTGACTGGA-GTTGTTTT--CTGTTCTTTCCTTGAGGTGTACCTGTC-----TTGTGTGAGGCAATGGTCTGGGCAAATGGTTAT?GTGTA-GTAGGAAGTTGC-------TGCTCTTGAACGC------------TCT-GTTTCGGC-AGAGTAAAGGAGGCAA-CACCAATTTGGGATAG-TCATTGATTTATCAGTGGCGCTCTTTCTAA---------------------------------------------------------------------- 'Pythium pachycaule UWA-BF02' ------------------------------------------------------------------------------------------------------------------------------------------ACACCAAAAAA--CTTTCC-CGTGAA-CCGTTGTAA-CTATGTTC-TGTGCTCTCT--CTCGG-GAGGGC-TGAACGAAGGTGGGCTGC---------TTAA-TTGTAGTCTGCCGATGTACTTTTAAACCC-ATTAAACTAATACTGAACTATACTCCGAAAACGAAAGTCTTTGGTTTTA---ATCA-ATAACAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAAATTTTGAACGCACATTGCACTTTCGGGTTATGCCTGGAAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGCCTTTCTTT-TTTTGTGTAGTCAA--GAAGAGAGATGGCAGACTGTGAGGTGTCTCGC------TGACTC----CCTCTTCGG-------AGGAGAAGACG-CGAGTCCCTTTAAATGTACGTTCGCTCTTTCTTGTGTTTA-GAT-GAAGTGTGACTTTCGAAC-GCAGTGATC--------TGTTT--GGATCGCTTTGCTCGAGTGGGCGACTTCGGTTAGGACATTAAAG-GAAGCAACCTCTATTGGCGGTATGTTAGGC-------TTCG---------------------------------------GCCCGACTTTGCAGCTGACTGGA-GTTGTTTT--CTGTTCTTTCCTTGAGGTGTACCTGTC-----TTGTGTGAGGCAATGGTCTGGGCAAATGGTTAT?GTGTA-GTAGGAAGTTGC-------TGCTCTTGAACGC------------TCT-GTTTCGGC-AGAGTAAAGGAGGCAA-CACCAATTTGGGATAG-TCATTGATTTATCAGTGGCGCTCTT--------------------------------------------------------------------------- Pythium_perplexum_FJ415965 -------------------------------------------------------------------------------------CCACACCAAAAAAACTTTCCACGTGAACCGTT--------TTGTGCGTTTTGTGCTTTG-T-GTTTGCTTTTGTTTGT-CTCGCTC--TTCGGGGTGT-GGTGAAGAAGAGGAAGCGCAAGGC-TAAACGAAGGCTGCGAGTCTCG------TGC-TTGCGGCCGATTTA--TTCTTTCAAACCC-ATACATTAAACACTGAACTATACTGTGAGGACGAAAGTCCTTGCTTTAA---ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTTCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTACCTCAACCTTGCCTTTCTTT-TCCTGTGTAGTCAGG-AGAGGAAATGTGCAGA-CGTGAAGTGTCTCGCC--TGTTGGTTT--AGCGGCTTCGGTTTC-TAAGTACGACTGGGCGAGTCCTTTTAAACGGACACGATCTTTCTGTTGTT--TTCTAC-GGAGTGTGGCGCTCGAAAAGCGGCGGTT--------TCTTACGGGATCGCTCGCAGTCGGACGGCGACTTTGGCGAATACATATAGG-AAGCAGAC-TCGACTCGCGGTACGTTAGGCGTGCTGTTTTGTGTGTGGATTTTGTAATGAAATCTCGCGCATTGCGGCTTGCTGAACAATGTTGCGTGTTGTG-GTCTGTTTTCCTGTGTTCGCTTCGAGGTGTACTGTCTAATGGCTGTGAGTTTGAACCTGTGGATATCATGCT-GTCGTTCG-GTAGAGTGCTG--CGTTATACTCTCTGTGGGAA--TACCACGATGCTTTCGAGTGT--TTTGGTAAAACAAAAGACGCAATTTGGGAAAAATTGTGTGTACTCGCGTGTACAGCGCGTGTATAACATCTCAA----------------------------------------------------------- 'Pythium perplexum UWA-11B' --------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGT-CTCGCTC--TTCGGGGTGT-GGTGAAGAAGAGGAAGCGCAAGGC-TAAACGAAGGCTGCGAGTCTCG------TGC-TTGCGGCCGATTTA--TTCTTTCAAACCC-ATACATTAAACACTGAACTATACTGTGAGGACGAAAGTCCTT-CTTTAA---ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTTCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTACCTCAACCTTGCCTTTCTTT-TCCTGTGTAGTCAGG-AGAGGAAATGTGCAGA-CGTGAAGTGTCTCGCC--TGTTGGTTT--AGCGGCTTCGGTTTC-TAAGTACGACTGGGCGAGTCCTTTTAAACGGACACGATCTTTCTGTTGTT--TTCTAC-GGAGTGTGGCGCTCGAAAAGCGGCGGTT--------TCTTACGGGATCGCTCGCAGTCGGACGGCGACTTTGGCGAATACATATAGG-AAGCAGAC-TCGACTCGCGGTACGTTAGGCGTGCTGTTTTGTGTGTGGATTTTGTAATGAAATCTCGCGCATTGCGGCTTGCTGAACAATGTTGCGTGTTGTG-GTCTGTTTTCCTGTGTTCGCTTCGAGGTGTACTGTCTAATGGCTGTGAGTTAGAACCTGTGGATATCATGCT-GTCGTTCG-GTAGAGTGCTG--CGTTATACTCTCTGTGGGAA--TACCACGATGCTTTCGAGTGT--TTTGGTAAAACAAAAGACGCAATTTGGGAAAAATTGTGTGTACTCGCGT------------------------------------------------------------------------------------ 'Pythium perplexum UWA-12B' ------------------------------------------------------------------------------------------------------TCCACGTGAACCGTT--------TTGTGCGTTTTGTGCTTTG-T-GTTTGCATTTGTTTGT-CTCGCTC--TTCGGGGTGT-GGTGAAGAAGAGGAAGCGCAAGGC-TAAACGAAGGCTGCGAGTCTCG------TGC-TTGCGGCCGATTTA--TTCTTTCAAACCC-ATACATTAAACACTGAACTATACTGTGAGGACGAAAGTCCTTGCTTTAA---ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGCACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTTCGGGTTATGCCTGGAAGTATGTCTGTATCAGTGTCCGTACCTCAACCTTGCCTTTCTTT-TCCTGTGTAGTCAGG-AGAGGAAATGTGCAGA-CGTGAAGTGTCTCGCC--TGTTGGTTT--AGCGGCTTCGGTTTC-TAAGTACGACTGGGCGAGTCCTTTTAAACGGACACGATATTTCTGTTGTT--TTCTAC-GGAGTGTGGCGCTCGAAAAGCGGCGGTT--------TCTTACGG-ATCGCTCGCAGTCGGACGGCGACTTTGGCGAATACATATAGG-AAGCAGAC-TCGACTCGCGGTACGTTAGGCGTGCTGTTTTGTGTGTGGATTTTGTAATGAAATCTCGCGCATTGCGGCTTGCTGAACAATGTTGCGTGTTGTG-GTCTGTTTTCCTGTGTTCGCTTCGAGGTGTACTGTCTAATGGCTGTGAGTTTGAACCTGTGGATATCATGCT-GTCGTTCG-GTAGAGTGCTG--CGTTATACTCTCTGTGGGAA--TACCACGATGCTTTCGAGTGT--TTTGGTAAAACAAAAGACGCAATTTGGGAAAAATTGTGTGTACTC---------------------------------------------------------------------------------------- Rhizoctonia_solani_JQ3138111 -----------------------------------------------------CTCTTCCG-TAGGTGCACGTGCAGAGGGGTCTTTAGTGAGTTTTATAGTGGAGAGTTGAGGTGGAGGGGGCCTTATCACATTGG---CATGTGCACTCTTTTCTTTTATATCC-ACACACCCCTGCGCACGTGTGAGACAGTCAATCTCCTGTGGGTTTTGGGGGGCAGAGCTTTATTGCAAAACCCTTTTTCCCCTTTTGCCTTTGCTGTCTACTCAATTTA-TACACACTCTAATTAATT-TTAAAACGAATGTAATTGATGTAACGCATTTAATACTAAGTTTCAACAACGGATCTCTTGGCTCTCGCCTTGATGAAGAACGCAGCGAAATGCGATAAGTAATGAGAATTGCAGAATTCAGCGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGT-ATTCCTTGGAGCATGCCTGTTTGAGTATCATGAAATC---TTCAAAG-CAAACCTTGTGTTAATTCAATCGGTCTCTTGCTTTGGTATTGGAGGTCT-TGGCA--GCTTCACACCTGCTCCTCTTTGTTTATTAGCTGGATCTCA--GTGTTATGCTTGGTTCCACTCGGCGTGATAAGTTATCTATCGCCGAGGACCCCGT-----AAAAAAGTGGCCAAGGCAAATGCAGACGAACCGCTTATAATAGTCCATTCACTCA-ACAACTAAATTTTTATGATCTGATCTCAAATCAGGTAGAAGACGAGTTCGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Rhizoctonia_solani_KF305079 -----------------------------------------------------TTCTTCCGGTAGG?GACCTTGCGGAAGGATCATTAATGAATT--AATGTAGAGGTTGGTTGTAGCTGGCTCCTAATTAACTTGGGGACATGTGCACACCTTTCTTTTTCATCCCATACACACCTGTGCACCTGTGAGACAG---ATGTTTTG-----TTTGGGGGAAGGAACTTTATTG---GACCTACTCTCCC---TGGACTTT--TGTTTACTTAATTTA-TATAAACTC-AATTTATT-TAGAAATGAATGTAATGGATGTAACACATTTAATACTAAGTTTCAACAACGGATTTTTTGGCTCTTGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATTGAATTTTTGAACGCCCCCTGCGCTCCTTGGT-ATTCCTTGGAGCAAGCCTGTTTGAGTATCAAGAAATT---TTCAAAATCAAACCTTTTGTTAAATCAATTGGTT--TTGCTTTGGTATTGGAGGTATATTGCA--GCTTCACCCCTGCTCCTCTTTGTGCCTTAGCTGGATTTCG--GTGTTATGCTTGGTTCCCCTCAGCGTGATAAGTTATCTATCGCTGAGGACCCCCTTTTAAAAAGGGGTGGCCAAGGTAAAAGCAGATGAACTGCTTTTAACAGTCCCATGACTTGGACAAATATTAATTTATGATCTGATCTCAAATCATGCCGTCGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ; END; BEGIN TREES; TITLE 'Consensus of 1,000'; LINK TAXA = Taxa1; TRANSLATE 1 'Pythium irregulare UWA-L406', 2 'Pythium irregulare UWA-M2102', 3 'Pythium irregulare UWA-1B', 4 'Pythium irregulare UWA-L303', 5 'Pythium irregulare UWA-WAC714', 6 'Pythium irregulare UWA-2B', 7 Pythium_irregulare_EU240169, 8 Pythium_irregulare_EU240172, 9 Pythium_mamillatum_DQ525086, 10 'Pythium mamillatum UWA-L302', 11 Pythium_mamillatum_DQ528753, 12 'Pythium mamillatum UWA-L106', 13 'Pythium intermedium UWA-L208', 14 'Pythium intermedium UWA-M3801', 15 'Pythium intermedium UWA-3B', 16 Pythium_intermedium_EF078693, 17 'Pythium intermedium UWA-5B', 18 'Pythium perplexum UWA-11B', 19 'Pythium perplexum UWA-12B', 20 Pythium_perplexum_FJ415965, 21 Pythium_lutarium_JQ898467, 22 'Pythium lutarium UWA-L401', 23 'Pythium lutarium UWA-L405', 24 Pythium_lutarium_EU240086, 25 'Pythium lutarium UWA-BF01', 26 'Pythium lutarium UWA-L202', 27 'Pythium lutarium UWA-L207', 28 Pythium_pachycaule_EF583439, 29 'Pythium pachycaule UWA-BF02', 30 'Pythium diclinum UWA-6R', 31 Pythium_conidiophorum_HQ643509, 32 'Pythium conidiophorum UWA-BF03', 33 'Pythium conidiophorum UWA-17', 34 'Pythium conidiophorum UWA-BF04', 35 Pythium_conidiophorum_HQ643512, 36 'Pythium conidiophorum UWA-L103', 37 'Pythium conidiophorum UWA-20', 38 Rhizoctonia_solani_JQ3138111, 39 Rhizoctonia_solani_KF305079; TREE Fig._1 = [&R] ((38:0.10362723216310421,39:0.0888414610397269):0.20563255929779886,(((37:5.723718926595733E-4,(36:1.1541079378607488E-4,(34:4.434222005657018E-4,((31:0.0018095962210483707,32:3.753494624634257E-4):0.01508857065289182,(33:0.0,35:0.004342773038807035):0.0013403507698656059):0.0024314047137743433):0.002128458945853562):0.003412831349506096):0.026139032867000478,((28:9.888235707904425E-4,29:0.0):0.002842056540570903,(23:0.004570686054654716,27:0.0034878669900741954,30:0.01404433381404524,(26:0.0017959260755046058,(25:0.0,(22:0.003216967389822134,(21:8.625379149288515E-4,24:0.002005369133397994):0.0):7.70542203687441E-6):0.0023903261213504834):0.004286580846659338):0.0039316371818308715):0.046886606516558405):0.14666224871187056,((18:0.0,(19:2.274026914842464E-4,20:0.006333882656225476):0.011605583997887692):0.14352925747755452,((15:0.00137227710547827,(14:0.002620004865492187,17:0.0020244424237778613,(13:2.91698563958942E-6,16:0.002866725127651182):0.009948431128478652):0.002270875858662369):0.1073486639853265,((12:0.0,(10:1.0527994741593716E-4,(9:7.853700514370843E-6,11:6.86474656430569E-6):0.0060644083183446496):0.013935911002111667):0.026659739575906727,(2:0.0010763678692894407,(3:0.0015172980536647396,(1:0.0011839629150905973,(6:0.0,(5:0.0,(4:0.0,(7:0.0,8:0.0):0.005023418272075086):0.004372420908524077):0.0031929694692313104):0.002742654701028413):0.0028614168728230416):0.0012473416130659443):0.01635646254438894):0.07702463675835158):0.04237623688818648):0.08648185729784535):0.20563255929779886); END;