#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 27, 2024; 2:25 GMT TreeBASE (cc) 1994-2008 Study reference: Nguyen V.X., Detcharoen M., Tuntiprapas P., Soe-htun U., Sidik J., Harah M., Prathep A., & Papenbrock J. 2014. Genetic species identification and population structure of Halophila (Hydrocharitaceae) from the Western Pacific to the Eastern Indian Ocean. BMC Evolutionary Biology, 14. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S15597] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=100; TAXLABELS 'Halophila ovalis HK-tc1' 'Halophila ovalis HK-tc2' 'Halophila ovalis HK-tc3' 'Halophila ovalis HK-tc4' 'Halophila ovalis HK-tc5' 'Halophila ovalis HK-tc6' 'Halophila ovalis IN-ka1' 'Halophila ovalis IN-ka10' 'Halophila ovalis IN-ka2' 'Halophila ovalis IN-ka3' 'Halophila ovalis IN-ka4' 'Halophila ovalis IN-ka5' 'Halophila ovalis IN-ka6' 'Halophila ovalis IN-ka7' 'Halophila ovalis IN-ka8' 'Halophila ovalis IN-ka9' 'Halophila ovalis IN-ma1' 'Halophila ovalis IN-ma10' 'Halophila ovalis IN-ma2' 'Halophila ovalis IN-ma3' 'Halophila ovalis IN-ma4' 'Halophila ovalis IN-ma5' 'Halophila ovalis IN-ma6' 'Halophila ovalis IN-ma7' 'Halophila ovalis IN-ma8' 'Halophila ovalis IN-ma9' 'Halophila ovalis MA-bd1' 'Halophila ovalis MA-bd2' 'Halophila ovalis MA-bd3' 'Halophila ovalis MA-bd4' 'Halophila ovalis MA-bd5' 'Halophila ovalis MA-jo1' 'Halophila ovalis MA-jo2' 'Halophila ovalis MA-jo3' 'Halophila ovalis MA-jo4' 'Halophila ovalis MA-jo5' 'Halophila ovalis MA-mg1' 'Halophila ovalis MA-mg2' 'Halophila ovalis MA-mg3' 'Halophila ovalis MA-mg4' 'Halophila ovalis MA-mg5' 'Halophila ovalis MA-sb1' 'Halophila ovalis MA-sb2' 'Halophila ovalis MA-sb3' 'Halophila ovalis MA-sb4' 'Halophila ovalis MA-sb5' 'Halophila ovalis MA-sr1' 'Halophila ovalis MA-sr2' 'Halophila ovalis MA-sr3' 'Halophila ovalis MA-sr4' 'Halophila ovalis MA-sr5' 'Halophila ovalis MA-tg1' 'Halophila ovalis MA-tg2' 'Halophila ovalis MA-tg3' 'Halophila ovalis MA-tg4' 'Halophila ovalis MA-tg5' 'Halophila ovalis TH-kn1' 'Halophila ovalis TH-kn2' 'Halophila ovalis TH-kn3' 'Halophila ovalis TH-kn4' 'Halophila ovalis TH-sa1' 'Halophila ovalis TH-sa2' 'Halophila ovalis TH-sa3' 'Halophila ovalis TH-sa4' 'Halophila ovalis TH-sa5' 'Halophila ovalis TH-sa6' 'Halophila ovalis TH-sa7' 'Halophila ovalis TH-sa8' 'Halophila ovalis TH-tr1' 'Halophila ovalis TH-tr10' 'Halophila ovalis TH-tr11' 'Halophila ovalis TH-tr12' 'Halophila ovalis TH-tr2' 'Halophila ovalis TH-tr3' 'Halophila ovalis TH-tr4' 'Halophila ovalis TH-tr5' 'Halophila ovalis TH-tr6' 'Halophila ovalis TH-tr7' 'Halophila ovalis TH-tr8' 'Halophila ovalis TH-tr9' 'Halophila ovalis VN-tt1' 'Halophila ovalis VN-tt10' 'Halophila ovalis VN-tt2' 'Halophila ovalis VN-tt3' 'Halophila ovalis VN-tt4' 'Halophila ovalis VN-tt5' 'Halophila ovalis VN-tt6' 'Halophila ovalis VN-tt7' 'Halophila ovalis VN-tt8' 'Halophila ovalis VN-tt9' 'Halophila ovalis VN-vp1' 'Halophila ovalis VN-vp10' 'Halophila ovalis VN-vp2' 'Halophila ovalis VN-vp3' 'Halophila ovalis VN-vp4' 'Halophila ovalis VN-vp5' 'Halophila ovalis VN-vp6' 'Halophila ovalis VN-vp7' 'Halophila ovalis VN-vp8' 'Halophila ovalis VN-vp9' ; END; BEGIN TAXA; TITLE Taxa2; DIMENSIONS NTAX=24; TAXLABELS Halophila_ovalis_KN01 Halophila_ovalis_KN02 Halophila_ovalis_KN03 Halophila_ovalis_KN04 Halophila_ovalis_SA01 Halophila_ovalis_SA02 Halophila_ovalis_SA03 Halophila_ovalis_SA04 Halophila_ovalis_SA05 Halophila_ovalis_SA06 Halophila_ovalis_SA07 Halophila_ovalis_SA08 Halophila_ovalis_SA09 Halophila_ovalis_TR01 Halophila_ovalis_TR02 Halophila_ovalis_TR03 Halophila_ovalis_TR04 Halophila_ovalis_TR05 Halophila_ovalis_TR06 Halophila_ovalis_TR07 Halophila_ovalis_TR08 Halophila_ovalis_TR09 Halophila_ovalis_TR10 Halophila_ovalis_TR11 ; END; BEGIN TAXA; TITLE Taxa3; DIMENSIONS NTAX=28; TAXLABELS Halophila_decipiens_KC175913 Halophila_major_AB436929 Halophila_major_Hap._13 Halophila_major_Hap._16 Halophila_major_Hap._4 Halophila_major_Hap._5 Halophila_major_KC175910 Halophila_minor_AF366405 Halophila_minor_AF366406 Halophila_ovalis_Hap._1 Halophila_ovalis_Hap._10 Halophila_ovalis_Hap._11 Halophila_ovalis_Hap._12 Halophila_ovalis_Hap._14 Halophila_ovalis_Hap._15 Halophila_ovalis_Hap._17 Halophila_ovalis_Hap._18 Halophila_ovalis_Hap._19 Halophila_ovalis_Hap._2 Halophila_ovalis_Hap._3 Halophila_ovalis_Hap._6 Halophila_ovalis_Hap._7 Halophila_ovalis_Hap._8 Halophila_ovalis_Hap._9 Halophila_ovalis_KC175908 Halophila_ovalis_KC175909 Halophila_ovalis_KC175911 Halophila_ovalis_KC175912 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M21525] TITLE Halophila_ovalis_SSRs; LINK TAXA = Taxa1; DIMENSIONS NCHAR=30; FORMAT DATATYPE=Standard SYMBOLS= "0 1 2 3 4 5 6 7 8 9" MISSING=? GAP= -; MATRIX [ 10 20 30] [ . . .] 'Halophila ovalis HK-tc1' 264264255255230230156180175175 'Halophila ovalis HK-tc2' 264264255255230230156180175175 'Halophila ovalis HK-tc3' 264264255255230230156180175175 'Halophila ovalis HK-tc4' 264264255255230230156180175175 'Halophila ovalis HK-tc5' 264264255255230230156180175175 'Halophila ovalis HK-tc6' 264264255255230230156180175175 'Halophila ovalis IN-ka1' 246264255280230240186186175175 'Halophila ovalis IN-ka10' 246264255280230240186186175175 'Halophila ovalis IN-ka2' 246264255280230240186186175175 'Halophila ovalis IN-ka3' 246264255280230240186186175175 'Halophila ovalis IN-ka4' 246264255280230240186186175175 'Halophila ovalis IN-ka5' 246264255280230240186186175175 'Halophila ovalis IN-ka6' 246264255280230240186186175175 'Halophila ovalis IN-ka7' 246264255280230240186186175175 'Halophila ovalis IN-ka8' 246264255280230240186186175175 'Halophila ovalis IN-ka9' 246264255280230240186186175175 'Halophila ovalis IN-ma1' 256256255280230240178178175175 'Halophila ovalis IN-ma10' 256256255280230240178178175175 'Halophila ovalis IN-ma2' 256256255280230240178178175175 'Halophila ovalis IN-ma3' 256256255280230240178178175175 'Halophila ovalis IN-ma4' 256256255280230240178178175175 'Halophila ovalis IN-ma5' 256256255280230240178178175175 'Halophila ovalis IN-ma6' 256256255280230240178178175175 'Halophila ovalis IN-ma7' 256256255280230240178178175175 'Halophila ovalis IN-ma8' 256256255280230240178178175175 'Halophila ovalis IN-ma9' 256256255280230240178178175175 'Halophila ovalis MA-bd1' 260266255255230236156184175175 'Halophila ovalis MA-bd2' 260266255255230236156184175175 'Halophila ovalis MA-bd3' 260266255255230236156184175175 'Halophila ovalis MA-bd4' 260266255255230236156184175175 'Halophila ovalis MA-bd5' 260266255255230236156184175175 'Halophila ovalis MA-jo1' 260268255280230236156180175175 'Halophila ovalis MA-jo2' 260268255280230236156180175175 'Halophila ovalis MA-jo3' 260268255280230236156180175175 'Halophila ovalis MA-jo4' 260268255280230236156180175175 'Halophila ovalis MA-jo5' 260268255280230236156180175175 'Halophila ovalis MA-mg1' 266272255255230236156184175175 'Halophila ovalis MA-mg2' 266272255255230236156184175175 'Halophila ovalis MA-mg3' 266272255255230236156184175175 'Halophila ovalis MA-mg4' 266272255255230236156184175175 'Halophila ovalis MA-mg5' 266272255255230236156184175175 'Halophila ovalis MA-sb1' 266266255255230236156184175177 'Halophila ovalis MA-sb2' 266266255255230236156184175177 'Halophila ovalis MA-sb3' 266266255255230236156184175177 'Halophila ovalis MA-sb4' 266266255255230236156184177177 'Halophila ovalis MA-sb5' 266266255255230236156184177177 'Halophila ovalis MA-sr1' 266266255255230236156156175175 'Halophila ovalis MA-sr2' 266266255255230236156156175175 'Halophila ovalis MA-sr3' 266266255255230236156156175175 'Halophila ovalis MA-sr4' 266266255255230236156156175175 'Halophila ovalis MA-sr5' 266266255255230236156156175175 'Halophila ovalis MA-tg1' 260268255255230236156186175175 'Halophila ovalis MA-tg2' 260268255255230236156186175175 'Halophila ovalis MA-tg3' 260268255255230236156186175175 'Halophila ovalis MA-tg4' 260268255255230236156186175175 'Halophila ovalis MA-tg5' 260268255255230236156186175175 'Halophila ovalis TH-kn1' 260292255255230238180186175175 'Halophila ovalis TH-kn2' 260292255255230238180186175175 'Halophila ovalis TH-kn3' 260292255255230238180186175175 'Halophila ovalis TH-kn4' 260292255255230238180186175175 'Halophila ovalis TH-sa1' 264296255280230240156156175175 'Halophila ovalis TH-sa2' 264296255280230240156156175175 'Halophila ovalis TH-sa3' 264296255280230240156156175175 'Halophila ovalis TH-sa4' 264296255280230240156156175175 'Halophila ovalis TH-sa5' 264296255280230240156156175175 'Halophila ovalis TH-sa6' 264296255280230240156156175175 'Halophila ovalis TH-sa7' 264296255280230240156156175175 'Halophila ovalis TH-sa8' 264296255280230240156156175175 'Halophila ovalis TH-tr1' 264296255280230240156156175175 'Halophila ovalis TH-tr10' 264296255280230240156156175175 'Halophila ovalis TH-tr11' 264296255280230240156156175175 'Halophila ovalis TH-tr12' 264296255280230240156156175175 'Halophila ovalis TH-tr2' 264296255280230240156156175175 'Halophila ovalis TH-tr3' 264296255280230240156156175175 'Halophila ovalis TH-tr4' 264296255280230240156156175175 'Halophila ovalis TH-tr5' 264264255280230240156156175175 'Halophila ovalis TH-tr6' 264264255280230240156156175175 'Halophila ovalis TH-tr7' 264296255280230240156156175175 'Halophila ovalis TH-tr8' 264296255280230240156156175175 'Halophila ovalis TH-tr9' 264296255280230240156156175175 'Halophila ovalis VN-tt1' 260260255255230238156180175177 'Halophila ovalis VN-tt10' 260260255255230238156180175177 'Halophila ovalis VN-tt2' 260260255255230238156180175177 'Halophila ovalis VN-tt3' 260260255255230238156180175177 'Halophila ovalis VN-tt4' 260260255255230238156180175177 'Halophila ovalis VN-tt5' 260260255255230238156180175177 'Halophila ovalis VN-tt6' 260260255255230238156180175177 'Halophila ovalis VN-tt7' 260260255255230238156180175177 'Halophila ovalis VN-tt8' 260260255255230238156180175177 'Halophila ovalis VN-tt9' 260260255255230238156180175177 'Halophila ovalis VN-vp1' 260292255255230238156182175177 'Halophila ovalis VN-vp10' 260292255255230238156182175177 'Halophila ovalis VN-vp2' 260292255255230238156182175177 'Halophila ovalis VN-vp3' 260292255255230238156182175177 'Halophila ovalis VN-vp4' 260292255255230238156182175177 'Halophila ovalis VN-vp5' 260292255255230238156182175177 'Halophila ovalis VN-vp6' 260292255255230238156182175177 'Halophila ovalis VN-vp7' 260292255255230238156182175177 'Halophila ovalis VN-vp8' 260292255255230238156182175177 'Halophila ovalis VN-vp9' 260292255255230238156182175177 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M21526] TITLE Halophila_ovalis_AFLP; LINK TAXA = Taxa2; DIMENSIONS NCHAR=219; FORMAT DATATYPE=Standard SYMBOLS= "0 1" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 ] [ . . . . . . . . . . . . . . . . . . . . . ] Halophila_ovalis_KN01 110010101101100011011111101101000111100011000100101110111100000110010111111101011100011000011001010011000111101100010001101010000000100100001101100001100010010010100000100001010000000000100000000000000000000000000001000 Halophila_ovalis_KN02 110010111111100011011111111101001101100011000111101110111110100110011111111101111110011011011001010011000111111101111101111010000000101100011101110101100011011110100010100001010001000000110000010100100000000100000011001 Halophila_ovalis_KN03 011010111011000011011111111101001100001010000011101111011111111110011011111101111101111101011001010011000111111001111101101110000000101000010010110100011011010101110010000000000000100000110000000100000000010000000000001 Halophila_ovalis_KN04 110011011101010011111111111111100011100011001011101110101111100110010110011101011101011010101001010011001111101100010001101000000000001100001101101001100000011100010001100011100010000011100000010100000000000100000000000 Halophila_ovalis_SA01 010111011111100001101011111101011111000011001101011101101101100011110001111011001110101101010001111101001101101110101101111011010010110100110110001001001001001100100111101000001001001100001101100010010000000000000000000 Halophila_ovalis_SA02 010010111111101111111011011101001001001011000101111101111111100110010011111011011110111100110101111101001100111110100100011010010100110110100001100001011001101100100100101010010101000010001101000101110000000100000001101 Halophila_ovalis_SA03 010111001101101111011001101101011101000011000100101100111111100110010011111011011110101100110101011101011110111110100110011000010110110110110101100001111000000101101001101000010100010000001100000100011100000000000000000 Halophila_ovalis_SA04 010111011101000111111001111101001101000011000111101101111111100110011010111001011110101000010101111101000111111110100100011010010000110010100101100001011000010100100100101000000001100000001100000100001100000000000000100 Halophila_ovalis_SA05 010111001101100111111001111101011101100011000100101100111111100010010111111001011110001100010001101101010110111110100110111000110110111010111111100111010100011111101000101001010100100000101100000000111110100000000110101 Halophila_ovalis_SA06 010110101101100010111001111001011101100011000101111100111111100110010010111001111110011000010101010001000101111000000000011000010000000000000001000100000000000000000000000000010000000000001000000101001000001000000000010 Halophila_ovalis_SA07 010110011101101011011011111101011111100011010101101100111111100110010011111011111110011101110101111101011101111110100110111000010110100010110101100101111100101111100101101110010001000000101100000100111100111110000111111 Halophila_ovalis_SA08 010110111101101011011001111101011010100011100101101101111101101110010010111001011110001000110001010001001110111110100000010000010100000000000001100001000000000010101000100000000000000000000000000101000100000010000000000 Halophila_ovalis_SA09 011110111101101011011001111101001101110011001101101101111111100110010010111101111110011000011001110101011111111110100000011001010100000000001101100001001000000000100000101000010000000000000000000000000100000010000000000 Halophila_ovalis_TR01 010110101101111110011001111101011011000011000001101111111101100110011011111001011110101100010101110111010101111110100100111010010000100110110100000001011000000000100000101000000000000001001000000100011100000000000000000 Halophila_ovalis_TR02 010110110101111111111111111101001100100011001110101101110111100110011011111011011110101101111101010111011101111110100110111010011000101110110000110101010000000100101000101000000000100000000000000000011100001001000001000 Halophila_ovalis_TR03 010110101111111111111011111101011111100011000100111101111111100111011010111111011110101101110101110111011101111110100111111010010010111110110101100101110000111101101001101010010101000001101000000000011100000000000001000 Halophila_ovalis_TR04 010110111111111111111011111111011111100011000100101101111111110111011010111111111110101101110101110111011101111110110111111110110110111110110101110111111011111111111001101100010101101001101100000110111100100000000001001 Halophila_ovalis_TR05 010110100101111111111001111101011111101011000110111110111111100111011011111111011110101101110101110111011101111110110111111010110110110110111101100111111000101101101111101010010101000111101100000110011100100000000001001 Halophila_ovalis_TR06 111111111111111111111111111101011001100011101111111101111111100111011011111001111110101101110101110111011101111110100100001110010110110110110110100001011100011100100111101000000001000001001101000100011100000000000001000 Halophila_ovalis_TR07 111111111111111111111111111111010011100011010111101101111111100111011011111011011110101101110101110111001101011110100101000000010110110110110101100001111000101101100101101110010101000101001111100110111110010100000000100 Halophila_ovalis_TR08 011111111111111111111111111111011001100011001101101101111111100111011011111111011110101101110111110111011101011110100100001100011000010110010101100101011001000101101000101000000001000001000000000000000000000000000000000 Halophila_ovalis_TR09 011111111111111111111111111111011001100011001111101101111101100111011111111111011110001101110111110111011101011110100100001100010000010110010101100101011001001101100100101000010011100011011010010000001000000000000000000 Halophila_ovalis_TR10 111011111111111111111101111011011001010011010111101110111111100110010111111011011110001001110101010111001101101110110110101010010000011111110101100111011011100011110101111010111110010000111100000010111100010100100000100 Halophila_ovalis_TR11 111111111111111111101111111111011000101011010111111101011001100110011101111111101110001101111001010111001100111110100001010100000110010010001010111101000000011101100110101010001001001110100101011111001101101100000001000 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M21527] TITLE Halophila_ITS_Alignment; LINK TAXA = Taxa3; DIMENSIONS NCHAR=628; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Halophila_decipiens_KC175913 CGTGACGAGCTCGAGTCGGGGCGAGGAATCCATCGTTCTCTTGCCCCGCATCGCATCTGCAGACCCAACGCTCGTATTCCAGCGGCGATGGGTCTCGCGGATCCCTAACGAACCCCCGGCGCGGATCGCGTCAAGGAGTACATGTGCGAACTTGGGCGGGTGCACGGTCGCGCGCATCCTCGTGCGGCTTGTGTTATTCCGC--CCCTTCCACGCAGCGAATTGGATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCACCCTGAATGCGGTGGACCTGGGTGGTGGAAGCGGAAGTTGGCCATCCGTGAGCT-ATAGGCATCGCACGATCCTTCGCGGTTGGCTAAATTCTCTCGACGATGTCTTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGCCGTGTCCTCTT-GGCGAGACCTCCATGGCCATTCCCCAAGCTAAGTATCCCCAGGTCAGGC Halophila_major_AB436929 CGTGACGAGCTCGAGTCGGGGCGAGGAATCCAGCATTCCCCCGCCCCGCCTTGCATCCGCGGATCCATCGCTCGCGTTCCGGCGGCGATGGGTCCTGCGGATCC-CAACGAACCCCCGGCGCGGATCGCGTCAAGGAGTACATGTGCGAACTCGGGCGGGCGCACGGCCGCGCG--TCCTCGCGTGGCCCGTGCGGTTCCGC--CCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCGCCCCCGACGCGGTGGCCCTGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTCGTAGGCATCGCAAGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCCTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGCCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATTCCCCAAGCTGAGTATCCCCAGGTCAGGC Halophila_major_Hap._13 CGTGACGAGCTCGAGTCGGGGCGAGGAATCCAGCATTCCCCCGCCCCGCCTCGCATCCGCGGATCCATCGCTCGCGTTCCGGCGGCGATGGGTCCTGCGGATCC-CAACGAACCCCCGGCGCGGATCGCGTCAAGGAGTACATGTGCGAACTCGGGCGGGCGCACGGCCGCGCG--TCCTCGCGTGGCTCGTGCGGTTCCGC--CCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCGCCCCCGACGCGGTGGCCCTGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTCGTAGGCATCGCAAGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCCTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGCCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATTCCCCAAGCTGAGTATCCCCAGGTCAGGC Halophila_major_Hap._16 CGTGACGAGCTCGAGTCGGGGCGAGGAATCCAGCATTCCCCCGCCCCGCCTCGCATCCGCGGATCCATCGCTCGCGTTCCGGCGGCGATGGGTCCTGCGGATCC-CAACGAACCCCCGGCGCGGATCGCGTCAAGGAGTACATGTGCGAACTCGGGCGGGCGCACGGCCGCGCG--TCCTCGCGTGGCTCGTGCGGTTCCGC--CCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCGCCCCCGACGCGGTGGCCCTGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTCGTAGGCATCGCACGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCTTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGCCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATTCCCCAAGCTGAGTATCCCCAGGTCAGGC Halophila_major_Hap._4 CGTGACGAGCTCGAGTCGGGGCGAGGAATCCAGCATTCCCCCGCCCCGCCTCGCGTCCGCGGATCCATCGCTCGCGTTCCGGCGGCGATGGGTCCTGCGGATCC-TAACGAACCCCCGGCGCGGATCGCGTCAAGGAGTACATGTGCGAACTCGGGCGGGCGCACGGCCGCGCG--TCCTCGCGCGGCCCGTGCGGTTCCGC--CCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCGCCCCCGACGCGGTGGCCCTGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTCGTAGGCATCGCAAGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCCTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGCCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATTCCCCAAGCTGAGTATCCCCAGGTCAGGC Halophila_major_Hap._5 CGTGACGAGCTCGAGTCGGGGCGAGGAATCCAGCATTCCCCCGCCCCGCCTCGCGTCCGCGGATCCATCGCTCGCGTTCCGGCGGCGATGGGTCCTGCGGATCC-TAACGAACCCCCGGCGCGGATCGCGTCAAGGAGTACATGTGCGAACTCGGGCGGGCGCACGGCCGCGCG--TCCTCGCGCGGCCCGTGCGGTTCCGC--CCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCGCCCCCGACGCGGTGGCCCTGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTCGTAGGCATCGCAAGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCCTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGCCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATTCCCCAAGCTGAGTATCCCCAGGTCAGGC Halophila_major_KC175910 CGTGACGAGCTCGAGTCGGGGCGAGGAATCCAGCATTCCCCCGCCCCGCCTCGCATCCGCGGATCCATCGCTTGCGTTCCGGCGGCGATGGGTCCTGCGGATCC-TAACGAACCCCCGGCGCGGATCGCGTCAAGGAGTACATGTGCGAACTCGGGCGGGCGCACGGCCGCGCG--TCCTCGCGCGGCTCGTGCGGTTCCGC--CCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCGCCCCCGACGCGGTGGCCCTGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTCGTAGGCATCGCAAGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCCTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGCCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATTCCCCAAGCTGAGTATCCCCAGGTCAGGC Halophila_minor_AF366405 CGTGACGAGCTCGAGCCGGGGCGAGGAATCCAGCATTCTCTCGCCCCGCCTCGCACCCGTGGACCCGTCGCTCGCGTTCCAGCGGCGACGGTTGCTGCGGATCC-TAACGAACCCCCGGCGCGGATCGCGTCAAGGAGTACATGTGCGAACTTGGGCGGGTGCACGGTCGCGCG--TCCTCGCGCGG?TCGTGCGGTTCCGC--CCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTA{GT}CGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCACCTCGAATGCGGTGGACCCGGGTGGTGGAAGCG{AG}AAGCTGGCCATCCGTGAGCTTATAGGCATCGCAAGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCTTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACCCGTTGCTTCACGCGCCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATCTCGAAAGCTGAGTATCCCCAGGTCAGGC Halophila_minor_AF366406 CGTGACGAGCTCGAGCCGGGGCGAGGAATCCAGCATTCTCTCGCCCCGCCTCGCACCCGTGGACCTGTCGCTCGCGTTCCAGCGGCGACGGTTGCTGCGGATCC-TAACGAACCCCCGGCGCGGATCGCGTCAAGGAGTACATGTGCGAACTTGGGCGGGTGCACGGTCGCGCG--TCCTCGCGCGGCTCGTGCGGTTCCGC--CCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCACCTCGAATGCGGTGGACGCGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTTAGAGGCATCGCAAGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCTTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACCCGTTGCTTCACGCGCCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATCTCGAAAGCTGAGTATCCCCAGGTCAGGC Halophila_ovalis_Hap._1 CGTGACGAGCTCGAGTCGGGGCGGGGAATCCAGCATTCTCTCGCCCCGCCTTGCATCCGTGGACCCATCGCTCGCGTTCCTGCGGCGACGGGTCCTACGGATCC-TAACGAACCCCCGGCGCAGATCGCGTCAAGGAGTACATGTGCGAACTTGGGCGGGTGCACGGCCGCGCG--TCCCCGCGCGGCCCGTGCGGTTCCGC--CCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCACCCCGAATGCGGTGGACTCGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTTATAGGCATCGCACGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCTTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGCCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATTCCCAAAGCTGAGTATCCCCAGGTCAGGC Halophila_ovalis_Hap._10 CGTGACGAGCTCGAGTCGGGGCGGGGAATCCAGCATTCTCTCGCCCCGCCTTGCATCCGTGGACCCATCGCTCGCGTTCCTGCGGCGACGGGTCCTACGGATCC-TAACGAACCCCCGGCGCAGATCGCGTCAAGGAGTACATGTGCGAACTTGGGCGGGTGCACGGCCGCGCG--TCCCCGCGCGGCCCGTGCGGTTCCGC--CCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATGGGCGATCGCTCCCCTCCCCCCACCCCGAATGCGGTGGACTCGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTTATAGGCATCGCACGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCTTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGCCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATTCCCAAAGCTGAGTATCCCCAGGTCAGGC Halophila_ovalis_Hap._11 CGTGACGAGCTCGAGTCGGGGCGGGGAATCCAGCATTCTCTCGCCCCGCCTTGCATCCGTGGACCCATCGCTCGCGTTCCTGCGGCGACGGGTCCTACGGATCC-TAACGAACCCCCGGCGCAGATCGCGTCAAGGAGTACATGTGCGAACTTGGGCGGGTGCACGGCCGCGCG--TCCCCGCGCGGCCCGTGCGGTTCCGC--CCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCACCCCGAATGCGGTGGACTCGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTTATAGGCATCGCACGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCTTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGCCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATTCCCAAAGCTGAGTATCCCCAGGTCAGGC Halophila_ovalis_Hap._12 CGTGACGAGCTCGAGTCGGGGCGGGGAATCCAGCATTCTCTCGCCCCGCCTTGCATCCGTGGACCCATCGCTCGCGTTCCTGCGGCGACGGGTCCTACGGATCC-TAACGAACCCCCGGCGCAGATCGCGTCAAGGAGTACATGTGCGAACTTGGGCGGGTGCACGGCCGCGCG--TCCCCGCGCGGCCCGTGCGGTTCCGC--CCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCACCCCGAATGCGGTGGACTCGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTTATAGGCATCGCACGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCTTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGCCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATTCCCAAAGCTGAGTATCCCCAGGTCAGGC Halophila_ovalis_Hap._14 CGTGACGAGCTCGAGTCGGGGCGGGGAATCCAGCATTCTCTCGCCCCGCCTTGCATCCGTGGACCCATCGCTCGCGTTCCTGCGGCGACGGGTCCTACGGATCC-TAACGAACCCCCGGCGCAGATCGCGTCAAGGAGTACATGTGCGAACTTGGGCGGGTGCACGGCCGCGCG--TCCCCGCGCGGCCCGTGCGGTTCCGC--CCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCACCCCGAATGCGGTGGACTCGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTTATAGGCATCGCACGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCTTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGCCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATTCCCAAAGCTGAGTATCCCCAGGTCAGGC Halophila_ovalis_Hap._15 CGTGACGAGCTCGAGTCGGGGCGGGGAATCCAGCATTCTCTCGCCCCGCCTTGCATCCGTGGACCCATCGCTCGCGTTCCTGCGGCGACGGGTCCTACGGATCC-TAACGAACCCCCGGCGCAGATCGCGTCAAGGAGTACATGTGCGAACTTGGGCGGGTGCACGGCCGCGCG--TCCCCGCGCGGCCCGTGCGGTTCCGC--CCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCACCCCGAATGCGGTGGACTCGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTTATAGGCATCGCACGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCTTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGCCGTGTCGTCCCCGGCGAGACCTCCGTGGCCATTCCCAAAGCTGAGTATCCCCAGGTCAGGC Halophila_ovalis_Hap._17 CGTGACGAGCTCGAGTCGGGGCGGGGAATCCAGCATTCTCTCGCCCCGCCTTGCATCCGTGGACCCATCGCTCGCGTTCCTGCGGCGACGGGTCCTACGGATCC-TAACGAACCCCCGGCGCAGGTCGCGTCAAGGAGTACATGTGCGAACTTGGGCGGGTGCACGGCCGCGCG--TCCCCGCGCGGCCCGTGCGGTTCCGCGCCCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCACCCCGAATGCGGTGGACTCGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTTATAGGCATCGCACGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCTTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGGCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATTCCCAAAGCTGAGTATCCCCAGGTCAGGC Halophila_ovalis_Hap._18 CGTGACGAGCTCGAGTCGGGGCGGGGAATCCAGCATTCTCTCGCCCCGCCTTGCATCCGTGGACCCATCGCTCGCGTTCCTGCGGCGACGGGTCCTACGGATCC-TAACGAACCCCCGGCGCAGGTCGCGTCAAGGAGTACATGTGCGAACTTGGGCGGGTGCACGGCCGCGCG--TCCCCGCGCGGCCCGTGCGGTTCCGCGCCCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCACCCCGAATGCGGTGGACTCGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTTATAGGCATCGCACGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCTTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGCCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATTCCCAAAGCTGAGTATCCCCAGGTCAGGC Halophila_ovalis_Hap._19 CGTGACGAGCTCGAGTCGGGGCGGGGAATCCAGCATTCTCTCGCCCCGCCTTGCATCCGTGGACCCATCGCTCGCGTTCCTGCGGCGACGGGTCCTACGGATCC-TAACGAACCCCCGGCGCAGGTCGCGTCAAGGAGTACATGTGCGAACTTGGGCGGGTGCACGGCCGCGCG--TCCCCGCGCGGCCCGTGCGGTTCCGCGCCCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCACCCCGAATGCGGTGGACTCGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTTATAGGCATCGCACGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCTTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGCCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATTCCCAAAGCTGAGTATCCCCAGGTCAGGC Halophila_ovalis_Hap._2 CGTGACGAGCTCGAGTCGGGGCGGGGAATCCAGCATTCTCTCGCCCCGCCTTGCATCCGTGGACCCATCGCTCGCGTTCCTGCGGCGACGGGTCCTACGGATCC-TAACGAACCCCCGGCGCAGATCGCGTCAAGGAGTACATGTGCGAACTTGGGCGGGTGCACGGCCGCGCG--TCCCCGCGCGGCCCGTGCGGTTCCGC--CCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCACCCCGAATGCGGTGGACTCGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTTATAGGCATCGCACGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCTTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGCCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATTCCCAAAGCTGAGTATCCCCAGGTCAGGC Halophila_ovalis_Hap._3 CGTGACGAGCTCGAGTCGGGGCGGGGAATCCAGCATTCTCTCGCCCCGCCTTGCATCCGTGGACCCATCGCTCGCGTTCCTGCGGCGACGGGTCCTACGGATCC-TAACGAACCCCCGGCGCAGATCGCGTCAAGGAGTACATGTGCGAACTTGGGCGGGTGCACGGCCGCGCG--TCCCCGCGCGGCCCGTGCGGTTCCGC--CCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCACCCCGAATGCGGTGGACTCGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTTATAGGCATCGCACGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCTTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGCCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATTCCCAAAGCTGAGTATCCCCAGGTCAGGC Halophila_ovalis_Hap._6 CGTGACGAGCTCGAGTCGGGGCGGGGAATCCAGCATTCTCTCGCCCCGCCTTGCATCCGTGGACCCATCGCTCGCGTTCCTGCGGCGACGGGTCCTACGGATCC-TAACGAACCCCCGGCGCAGATCGCGTCAAGGAGTACATGTGCGAACTTGGGCGGGTGCACGGCCGCGCG--TCCCCGCGCGGCCCGTGCGGTTCCGC--CCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCACCCCGAATGCGGTGGACTCGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTTATAGGCATCGCACGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCTTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGCCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATTCCCAAAGCTGAGTATCCCCAGGTCAGGC Halophila_ovalis_Hap._7 CGTGACGAGCTCGAGTCGGGGCGGGGAATCCAGCATTCTCTCGCCCCGCCTTGCATCCGTGGACCCATCGCTCGCGTTCCTGCGGCGACGGGTCCTACGGATCC-TAACGAACCCCCGGCGCAGATCGCGTCAAGGAGTACATGTGCGAACTTGGGCGGGTGCACGTCCGCGCG--TCCCCGCGCGGCCCGTGCGGTTCCGC--CCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCACCCCGAATGCGGTGGACTCGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTTATAGGCATCGCACGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCTTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGCCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATTCCCAAAGCTGAGTATCCCCAGGTCAGGC Halophila_ovalis_Hap._8 CGTGACGAGCTCGAGTCGGGGCGGGGAATCCAGCATTCTCTCGCCCCGCCTTGCATCCGTGGATCCATCGCTCGCGTTCCTGCGGCGACGGGTCCTACGGATCC-TAACGAACCCCCGGCGCAGATCGCGTCAAGGAGTACATGTGCGAACTTGGGCGGGTGCACGTCCGCGCG--TCCCCGCGCGGCCCGTGCGGTTCCGC--CCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCACCCCGAATGCGGTGGACTCGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTTATAGGCATCGCACGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCTTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGCCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATTCCCAAAGCTGAGTATCCCCAGGTCAGGC Halophila_ovalis_Hap._9 CGTGACGAGCTCGAGTCGGGGCGGGGAATCCAGCATTCTCTCGCCCCGCCTTGCATCCGTGGACCCATCGCTCGCGTTCCTGCGGCGACGGGTCCTACGGATCC-TAACGAACCCCCGGCGCAGATCGCGTCAAGGAGTACATGTGCGAACTTGGGCGGGTGCACGGCCGCGCG--TCCCCGCGCGGCCCGTGCGGTTCCGC--CCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCACCCCGAATGCGGTGGACTCGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTTATAGGCATCGCACGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCTTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGCCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATTCCCAAAGCTGAGTATCCCCAGGTCAGGC Halophila_ovalis_KC175908 CGTGACGAGCTCGAGTCGGGGCGGGGAATCCAGCATTCTCTCGCCCCGCCTTGCATCCGTGGACCCATCGCTCGCGTTCCTGCGGCGACGGGTCCTACGGATCC-TAACGAACCCCCGGCGCAGATCGCGTCAAGGAGTACATGTGCGAACTTGGGCGGGTGCACGGCCGCGCG--TCCCCGCGCGGCCCGTGCGGTTCCGC--CCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCACCCCGAATGCGGTGGACTCGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTTATAGGCATCGCACGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCTTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGCCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATTCCCAAAGCTGAGTATCCCCAGGTCAGGC Halophila_ovalis_KC175909 CGTGACGAGCTCGAGTCGGGGCGGGGAATCCAGCATTCTCTCGCCCCGCCTTGCATCCGTGGACCCATCGCTCGCGTTCCTGCGGCGACGGGTCCTACGGATCC-TAACGAACCCCCGGCGCAGATCGCGTCAAGGAGTACATGTGCGAACTTGGGCGGGTGCACGGCCGCGCG--TCCCCGCGCGGCCCGTGCGGTTCCGC--CCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCACCCCGAATGCGGTGGACTCGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTTATAGGCATCGCACGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCTTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGCCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATTCCCAAAGCTGAGTATCCCCAGGTCAGGC Halophila_ovalis_KC175911 CGTGACGAGCTCGAGTCGGGGCGGGGAATCCAGCATTCTCTCGCCCCGCCTTGCATCCGTGGACCCATCGCTCGCGTTCCTGCGGCGACGGGTCCTACGGATCC-TAACGAACCCCCGGCGCAGATCGCGTCAAGGAGTACATGTGCGAACTTGGGCGGGTGCACGGCCGCGCG--TCCCCGCGCGGCCCGTGCGGTTCCGC--CCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCACCCCGAATGCGGTGGACTCGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTTATAGGCATCGCACGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCTTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGCCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATTCCCAAAGCTGAGTATCCCCAGGTCAGGC Halophila_ovalis_KC175912 CGTGACGAGCTCGAGTCGGGGCGGGGAATCCAGCATTCTCTCGCCCCGCCTTGCATCCGTGGACCCATCGCTCGCGTTCCTGCGGCGACGGGTCCTACGGATCC-TAACGAACCCCCGGCGCAGATCGCGTCAAGGAGTACATGTGCGAACTTGGGCGGGTGCACGGCCGCGCG--TCCCCGCGCGGCCCGTGCGGTTCCGC--CCCTTCCACGCAGCGAACTGTATGACTCTCGGCAATGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCGTCAGGCCGAGGGCACGTCTGCCTGGGCGACCAATAGGCGATCGCTCCCCTCCCCCCACCCCGAATGCGGTGGACTCGGGTGGTGGAAGCGGAAGCTGGCCATCCGTGAGCTTATAGGCATCGCACGATCCTTCGCGGTTGGCTCAATTCTCTCGACGATGTCTTGCCTCTGACGCATCACGTCGCGCGGTGGATCGCACTCGTTGCTTCACGTGCCGTGTCGTCCC-GGCGAGACCTCCGTGGCCATTCCCAAAGCTGAGTATCCCCAGGTCAGGC ; END; BEGIN TREES; TITLE Halophila_ovalis_SSRs; LINK TAXA = Taxa1; TRANSLATE 1 'Halophila ovalis HK-tc1', 2 'Halophila ovalis HK-tc2', 3 'Halophila ovalis HK-tc3', 4 'Halophila ovalis HK-tc4', 5 'Halophila ovalis HK-tc5', 6 'Halophila ovalis HK-tc6', 7 'Halophila ovalis VN-vp1', 8 'Halophila ovalis VN-vp2', 9 'Halophila ovalis VN-vp3', 10 'Halophila ovalis VN-vp4', 11 'Halophila ovalis VN-vp5', 12 'Halophila ovalis VN-vp6', 13 'Halophila ovalis VN-vp7', 14 'Halophila ovalis VN-vp8', 15 'Halophila ovalis VN-vp9', 16 'Halophila ovalis VN-vp10', 17 'Halophila ovalis VN-tt1', 18 'Halophila ovalis VN-tt2', 19 'Halophila ovalis VN-tt3', 20 'Halophila ovalis VN-tt4', 21 'Halophila ovalis VN-tt5', 22 'Halophila ovalis VN-tt6', 23 'Halophila ovalis VN-tt7', 24 'Halophila ovalis VN-tt8', 25 'Halophila ovalis VN-tt9', 26 'Halophila ovalis VN-tt10', 27 'Halophila ovalis MA-sr1', 28 'Halophila ovalis MA-sr2', 29 'Halophila ovalis MA-sr3', 30 'Halophila ovalis MA-sr4', 31 'Halophila ovalis MA-sr5', 32 'Halophila ovalis MA-tg1', 33 'Halophila ovalis MA-tg2', 34 'Halophila ovalis MA-tg3', 35 'Halophila ovalis MA-tg4', 36 'Halophila ovalis MA-tg5', 37 'Halophila ovalis MA-sb1', 38 'Halophila ovalis MA-sb2', 39 'Halophila ovalis MA-sb3', 40 'Halophila ovalis MA-sb4', 41 'Halophila ovalis MA-sb5', 42 'Halophila ovalis MA-bd1', 43 'Halophila ovalis MA-bd2', 44 'Halophila ovalis MA-bd3', 45 'Halophila ovalis MA-bd4', 46 'Halophila ovalis MA-bd5', 47 'Halophila ovalis MA-mg1', 48 'Halophila ovalis MA-mg2', 49 'Halophila ovalis MA-mg3', 50 'Halophila ovalis MA-mg4', 51 'Halophila ovalis MA-mg5', 52 'Halophila ovalis TH-kn1', 53 'Halophila ovalis TH-kn2', 54 'Halophila ovalis TH-kn3', 55 'Halophila ovalis TH-kn4', 56 'Halophila ovalis MA-jo1', 57 'Halophila ovalis MA-jo2', 58 'Halophila ovalis MA-jo3', 59 'Halophila ovalis MA-jo4', 60 'Halophila ovalis MA-jo5', 61 'Halophila ovalis TH-sa1', 62 'Halophila ovalis TH-sa2', 63 'Halophila ovalis TH-sa3', 64 'Halophila ovalis TH-sa4', 65 'Halophila ovalis TH-sa5', 66 'Halophila ovalis TH-sa6', 67 'Halophila ovalis TH-sa7', 68 'Halophila ovalis TH-sa8', 69 'Halophila ovalis TH-tr1', 70 'Halophila ovalis TH-tr2', 71 'Halophila ovalis TH-tr3', 72 'Halophila ovalis TH-tr4', 73 'Halophila ovalis TH-tr5', 74 'Halophila ovalis TH-tr6', 75 'Halophila ovalis TH-tr7', 76 'Halophila ovalis TH-tr8', 77 'Halophila ovalis TH-tr9', 78 'Halophila ovalis TH-tr10', 79 'Halophila ovalis TH-tr11', 80 'Halophila ovalis TH-tr12', 81 'Halophila ovalis IN-ma1', 82 'Halophila ovalis IN-ma2', 83 'Halophila ovalis IN-ma3', 84 'Halophila ovalis IN-ma4', 85 'Halophila ovalis IN-ma5', 86 'Halophila ovalis IN-ma6', 87 'Halophila ovalis IN-ma7', 88 'Halophila ovalis IN-ma8', 89 'Halophila ovalis IN-ma9', 90 'Halophila ovalis IN-ma10', 91 'Halophila ovalis IN-ka1', 92 'Halophila ovalis IN-ka2', 93 'Halophila ovalis IN-ka3', 94 'Halophila ovalis IN-ka4', 95 'Halophila ovalis IN-ka5', 96 'Halophila ovalis IN-ka6', 97 'Halophila ovalis IN-ka7', 98 'Halophila ovalis IN-ka8', 99 'Halophila ovalis IN-ka9', 100 'Halophila ovalis IN-ka10'; TREE Consensus_of_100_MPTs = [&R] ((1,2),(3,(4,(5,(6,((17,(18,(19,(20,(21,(22,(23,(24,(25,(26,(8,(9,(10,(11,(12,(13,(14,(15,(16,(7,(53,(54,(52,55))))))))))))))))))))))),((57,(58,(59,(56,60)))),(32,(33,(34,(35,(36,(42,(43,(44,(45,(46,((38,(39,(37,(40,41)))),((48,(49,(50,(47,51)))),(28,(29,(30,(31,(27,((82,(83,(84,(85,(86,(87,(88,(89,(81,90))))))))),((74,(73,(92,(93,(94,(95,(96,(97,(98,(99,(91,100))))))))))),(62,(63,(64,(65,(66,(67,(68,(69,(70,(71,(72,(75,(76,(77,(78,(79,(61,80))))))))))))))))))))))))))))))))))))))))))); END; BEGIN TREES; TITLE Halophila_ITS_Consensus; LINK TAXA = Taxa3; TRANSLATE 1 Halophila_decipiens_KC175913, 2 Halophila_minor_AF366405, 3 Halophila_minor_AF366406, 4 Halophila_major_Hap._13, 5 Halophila_major_AB436929, 6 Halophila_major_KC175910, 7 Halophila_major_Hap._5, 8 Halophila_major_Hap._4, 9 Halophila_major_Hap._16, 10 Halophila_ovalis_Hap._6, 11 Halophila_ovalis_Hap._12, 12 Halophila_ovalis_Hap._14, 13 Halophila_ovalis_Hap._9, 14 Halophila_ovalis_Hap._11, 15 Halophila_ovalis_Hap._15, 16 Halophila_ovalis_KC175912, 17 Halophila_ovalis_KC175911, 18 Halophila_ovalis_KC175908, 19 Halophila_ovalis_KC175909, 20 Halophila_ovalis_Hap._17, 21 Halophila_ovalis_Hap._18, 22 Halophila_ovalis_Hap._19, 23 Halophila_ovalis_Hap._1, 24 Halophila_ovalis_Hap._10, 25 Halophila_ovalis_Hap._3, 26 Halophila_ovalis_Hap._2, 27 Halophila_ovalis_Hap._8, 28 Halophila_ovalis_Hap._7; TREE Consensus_tree_of_101_trees_fro = [&R] (1:0.02471432,((6:0.00163208,((7:1.0E-8,8:1.0E-8):0.00328278,(5:0.00327554,(4:1.0E-8,9:0.00328721):1.0E-8):0.0032771):1.0E-8):0.02572248,((2:1.0E-8,3:0.00653181):0.02052229,(11:1.0E-8,(12:1.0E-8,13:1.0E-8,14:1.0E-8,15:1.0E-8,16:1.0E-8,17:1.0E-8,(18:1.0E-8,(19:1.0E-8,((21:1.0E-8,(20:0.0016088,22:1.0E-8):1.0E-8):0.00160904,(23:1.0E-8,(24:0.00160904,(25:1.0E-8,(26:1.0E-8,(10:1.0E-8,(27:0.0016039,28:1.0E-8):0.00161074):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):0.01534028):0.00599287):0.02471432); END; BEGIN TREES; TITLE Halophila_ovalis_AFLP; LINK TAXA = Taxa2; TRANSLATE 1 Halophila_ovalis_KN01, 2 Halophila_ovalis_KN02, 3 Halophila_ovalis_KN03, 4 Halophila_ovalis_KN04, 5 Halophila_ovalis_SA01, 6 Halophila_ovalis_SA02, 7 Halophila_ovalis_SA03, 8 Halophila_ovalis_SA04, 9 Halophila_ovalis_SA05, 10 Halophila_ovalis_SA06, 11 Halophila_ovalis_SA07, 12 Halophila_ovalis_SA08, 13 Halophila_ovalis_SA09, 14 Halophila_ovalis_TR01, 15 Halophila_ovalis_TR02, 16 Halophila_ovalis_TR03, 17 Halophila_ovalis_TR04, 18 Halophila_ovalis_TR05, 19 Halophila_ovalis_TR06, 20 Halophila_ovalis_TR07, 21 Halophila_ovalis_TR08, 22 Halophila_ovalis_TR09, 23 Halophila_ovalis_TR10, 24 Halophila_ovalis_TR11; TREE Consensus_of_101_MPTs = [&R] (10,12,13,(4,(1,(2,3))),(8,(14,(15,((7,(9,11)),((16,(17,18)),((20,(6,23)),((21,22),(19,(5,24)))))))))); END;