#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on March 28, 2024; 16:20 GMT TreeBASE (cc) 1994-2008 Study reference: Liu A., Xu T., & Guo L. 2006. Molecular and morphological description of Pestalotiopsis hainanensis sp. nov., a new endophyte from the tropical region of China. Fungal Diversity, null. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S1569] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=30; TAXLABELS Pestalotiopsis_aquatica Pestalotiopsis_clavispora Pestalotiopsis_conigena Pestalotiopsis_crassiuscula Pestalotiopsis_disseminata Pestalotiopsis_gracilis Pestalotiopsis_hainanensis Pestalotiopsis_heterocornis_1 Pestalotiopsis_heterocornis_2 Pestalotiopsis_heterocornis_3 Pestalotiopsis_jesteri Pestalotiopsis_karstenii_1 Pestalotiopsis_karstenii_2 Pestalotiopsis_karstenii_3 Pestalotiopsis_kunmingensis Pestalotiopsis_lawsoniae Pestalotiopsis_mangifolia Pestalotiopsis_microspora Pestalotiopsis_neglecta Pestalotiopsis_olivacea Pestalotiopsis_paeoniae Pestalotiopsis_paeoniicola Pestalotiopsis_photiniae Pestalotiopsis_rhododendri Pestalotiopsis_subcuticularis Pestalotiopsis_theae Pestalotiopsis_versicolor Pestalotiopsis_westerdijkii Seiridium_cardinale Seiridium_ceratosporum ; END; BEGIN TAXA; TITLE Taxa2; DIMENSIONS NTAX=27; TAXLABELS Pestalotiopsis_aquatica Pestalotiopsis_clavispora Pestalotiopsis_conigena Pestalotiopsis_crassiuscula Pestalotiopsis_disseminata Pestalotiopsis_hainanensis Pestalotiopsis_heterocornis_1 Pestalotiopsis_heterocornis_2 Pestalotiopsis_heterocornis_3 Pestalotiopsis_karstenii_1 Pestalotiopsis_karstenii_2 Pestalotiopsis_karstenii_3 Pestalotiopsis_kunmingensis Pestalotiopsis_lawsoniae Pestalotiopsis_mangifolia Pestalotiopsis_microspora Pestalotiopsis_neglecta Pestalotiopsis_olivacea Pestalotiopsis_paeoniae Pestalotiopsis_paeoniicola Pestalotiopsis_photiniae Pestalotiopsis_subcuticularis Pestalotiopsis_theae Pestalotiopsis_versicolor Pestalotiopsis_westerdikii Seiridium_cardinale Seiridium_ceratosporum ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M1219] TITLE 'Beta-tubulin'; LINK TAXA = Taxa2; DIMENSIONS NCHAR=485; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Pestalotiopsis_aquatica -----------------------------TGGTATGTAATCT-GTCTGCCTCGACACGGCCTCAA-TACGACGTTTTTCG-TGCCTGCACGACGGCCCCG-ATCAGT--GAATTAGGTCA-AGATACAGGG--AACATGACGCTAATAGGTCATTTATAGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTATGTACTATTTTCAATTCCTCCTGCTTCCTGTTGA-GCTTGTAGGCTGAC-TCGATGGCCATTTAGCTACAACGGTACCTCCGAGCTCCAGCT-CGAGCGTATGAGCGTCTACTTCAACGAGGCTTCCGGCAACAAGTACGTTCCTCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGC-CGTCCGCGCCGGT---CCCTTCGGCCAGCTCTTCCGCCCTGACAACTTCGTCTTCGGTCAGTCCGGTGCTGGCAACAACTGGGCCAAGGGT-- Pestalotiopsis_clavispora -----------------------------TGGTATGTAACCT-GTCTGCCTCGACACGGCCTTGAATACGACGTTTTTCG-TGCCTGCACGACGGCCCCG-AACAGT--GAATTAGGTCA-AGATAGAGGG--AACATGATGCTAATAGGTCATTGATAGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTATGTACTATTTTCAATTCCTCCTGCTTCCTGTTGA-GCTTGTAGGCTGAC-TCGATGGCCATTTAGCTACAACGGTACCTCCGAGCTCCAGCT-CGAGCGTATGAGCGTCTACTTCAACGAGGCTTCCGGTAACAAGTACGTTCCTCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGC-CGTCCGCGCCGGT---CCCTTCGGCCAGCTCTTCCGCCCTGACAACTTCGTCTTCGGTCAGTCCGGTGCTGGCAACAACTGGGCCAAGGGT-- Pestalotiopsis_conigena -----------------------------TGGTATGTAATCT-GTCTGCCTCGACACGGCCTCAA-TACGACGTTTTTCG-TGCCTGCACGACGGCCCCG-ATCAGT--GAATTAGGTCA-AGATACAGGG--AACATGACGCTAATAGGTCATTTATAGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTATGTACTATTTTCAATTCCTCCTGCTTCCTGTTGA-GCTTGTAGGCTGAC-TCGATGGCCATTTAGCTACAACGGTACCTCCGAGCTCCAGCT-CGAGCGTATGAGCGTCTACTTCAACGAGGCTTCCGGCAACAAGTACGTTCCTCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGC-CGTCCGCGCCGGT---CCCTTCGGCCAGCTCTTCCGCCCTGACAACTTCGTCTTCGGTCAGTCCGGTGCTGGCAACAACTGGGCCAAGGGT-- Pestalotiopsis_crassiuscula ------------------------------------TAATCT-GTCTGCCTCGACACGGCCTCAA-TACGACGTTTTTCG-TGCCTGCACGACGGCCCCG-ATCAGT--GAATTAGGTCA-AGATACAGGG--AACATGACGCTAATAGGTCATTTATAGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTATGTACTATTTTCAATTCCTCCTGCTTCCTGTTGA-GCTTGTAGGCTGAC-TCGATGGCCATTTAGCTACAACGGTACCTCCGAGCTCCAGCT-CGAGCGTATGAGCGTCTACTTCAACGAGGCTTCCGGCAACAAGTACGTTCCTCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGC-CGTCCGCGCCGGT---CCCTTCGGCCAGCTCTTCCGCCCTGACAACTTCGTCTTCGGTCAGTCCGGTGCTGGCAACAACTGGGCCAAGGGT-- Pestalotiopsis_disseminata -----------------------------TGGTATGTAGCCC-ATCTACCTCGACGC-GCCTCAA-TACGACACCCCCCGGCAACTCGACAACG--ACATTCTCAAC---TGCTTGTTTGGAACCATACGAAAGACTTGATACTGACCGGTCTATGATAGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTACGTACCCTTTCCCTGGCTACTCGCTTTCTCGTGA-ACATGTCAGCTAACAGTTGTGCTTGTTCAGCTACAACGGTACCTCCGAGCTCCAGCT-CGAGCGCATGAGCGTCTACTTCAACGAGGCTTCCGGCAACAAGTACGTTCCTCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGC-CGTCCGCGCCGGT---CCTTTCGGTCAGCTCTTCCGCCCTGACAACTTCGTCTTCGGTCAGTCCGGTGCCGGAAACAACTGGGCCAAGGGT-- Pestalotiopsis_hainanensis -----------------------------TGGTATGTAGCCC-ATCTACCTCGACAC-GCCTCAA-TACGACAACCCCCCGCAACTCGACAACG--ACGTTCTCAACAAGTGCTTGCTTGGAAACAAGGGAAAGACTTGATACTGACCGGTCCCTGATAGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTACGTACCCTTTCCTTGGCTACTTGCTTTCCCACGA-ACATCTCAGCTAACACTCGTGGTTGTTCAGCTACAACGGTACCTCCGAGCTCCAGCT-CGAGCGCATGAGCGTCTACTTCAACGAGGCTTCCGGCAACAAGTACGTTCCTCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGC-CGTCCGCGCCGGT---CCTTTCGGTCAGCTCTTCCGCCCTGACAACTTCGTCTTCGGTCAGTCCGGTGCCGGAAACAACTGGGCCAAGGGT-- Pestalotiopsis_heterocornis_1 --------------------------------TATGTAGCCC-ATCTACCTCGACAC-GCCTCAA-TACGACACCCTCCG-CAACTCGACGACG--ACATTCTCGGC---TTCTTGGTTGGAACCGAACCAAAGACTTGATACTGACCGGTCTCTGATAGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTACGTACCGTTTCCTTGCCTACTTGCTTTCCCACGA-ACATGTTAGCTAACACTCGTGCTTGCTCAGCTACAACGGCACCTCCGAGCTCCAGCT-CGAGCGCATGAGCGTCTACTTCAACGAGGCTTCCGGCAACAAGTACGTTCCTCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGACGC-CGTCCGCGCCGGT---CCTTTCGGCCAGCTCTTCCGCCCTGACAACTTCGTCTTCGGTCAGTCCGGTGCCGGAAACAACTGGGCCAAGGGT-- Pestalotiopsis_heterocornis_2 ----------------------------------------CC-ATCTACCTCGACAC-GCCTCAA-TACGACACCCTCCG-CAACTCGACGACG--GCATTCTCGGC---TACTTGGTTGGAACCAAACGAAAGACTTGATACTGACCGGTCTCTGATAGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTACGTACCGTTTCCTTGGCTACTTGCTTTCCCACGA-ACATGTTAGCTAACACTCGTGCTTGCTCAGCTACAACGGCACCTCCGAGCTCCAGCT-CGAGCGCATGAGCGTCTACTTCAACGAGGCTTCCGGCAACAAGTACGTTCCTCGTGCTGTCCTCGTCGATCTCGAGCCCGGTACCATGGACGC-CGTCCGCGCCGGT---CCTTTCGGCCAGCTCTTCCGCCCTGACAACTTCGTCTTCGGTCAGTCCGGTGCCGGAAACAACTGGGCCAAGGGT-- Pestalotiopsis_heterocornis_3 --------------------------------TATGTAGTCC-ATCTACCTCGACAC-GCCTCAA-TACGACACCCTCCG-CAACTCGACGACG--GCATTCTCGGC---TACTTGGTTGGAACCAAACGAAAGACTTGATACTGACCGGTCTCTGATAGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTACGTACCGTTTCCTTGGCTACTTGCTTTCCCACGA-ACATGTTAGCTAACACTCGTGCTTGCTCAGCTACAACGGCACCTCCGAGCTCCAGCT-CGAGCGCATGAGCGTCTACTTCAACGAGGCTTCCGGCAACAAGTACGTTCCTCGTGCTGTCCTCGTCGATCTCGAGCCCGGTACCATGGACGC-CGTCCGCGCCGGT---CCTTTCGGCCAGCTCTTCCGCCCTGACAATTTCGTCTTCGGTCAGTCCGGTGCCGGAAACAACTGGGCCAAGGGT-- Pestalotiopsis_karstenii_1 -----------------------------TGGTATGTATCCC-ATCTACCTCGACAC-GCCTCAA-TACGACGCCTCCCG-CAGCTCGACCACG--ACGGCCTCAAC---TACTTGGTTGGAACCAAACAAAAGACTTGATACTGACCGGTCTCTGATAGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTACGTACCCTTGCCTTCTCTATTTGCCTTCCCACGA-ACATGTTAGCTAACACTCGTGCTTGCTCAGCTACAACGGTACCTCCGAGCTCCAGCT-CGAGCGCATGAGCGTCTACTTCAACGAGGCTTCCGGCAACAAGTACGTTCCTCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGC-CGTCCGCGCCGGT---CCTTTCGGTCAGCTCTTCCGCCCTGACAACTTCGTCTTCGGTCAGTCCGGTGCCGGAAACAACTGGGCCAAGGGT-- Pestalotiopsis_karstenii_2 ------------------------------------TATCCC-ATCTACCTCGACAC-GCCTCAA-TACGACGCCTCCCG-CAGCTCGACCACG--ACGGCCTCAAC---TACTTGGTTGGAACCAAACAAAAGACTTGATACTGACCGGTCTCTGATAGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTACGTACCCTTGCCTTCTCTATTTGCCTTCCCACGA-ACATGTTAGCTAACACTCGTGCTTGCTCAGCTACAACGGTACCTCCGAGCTCCAGCT-CGAGCGCATGAGCGTCTACTTCAACGAGGCTTCCGGCAACAAGTACGTTCCTCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGC-CGTCCGCGCCGGT---CCTTTCGGTCAGCTCTTCCGCCCTGACAACTTCGTCTTCGGTCAGTCCGGTGCCGGAAACAACTGGGCCAAGGGT-- Pestalotiopsis_karstenii_3 -----------------------------TGGTATGTAGCCC-ATCTACCTCCACG--GCCTCAG-AACGACGCCTCCCG-CAGCTCGACCACG--ACGGCCTCAAC---TATTTGGTTGGAACCAAACAAAAGACTTGATACTGACCGGTCTCTGATAGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTACGTACCCTTGCCTTCTCCATTTGCCTTCCCACGA-ACATGTTAGCTAACACTCGTGCTTGCTCAGCTACAACGGTACCTCCGAGCTCCAGCT-CGAGCGCATGAGCGTCTACTTCAACGAGGCTTCCGGCAACAAGTACGTTCCTCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGC-CGTCCGCGCCGGT---CCTTTCGGTCAGCTCTTCCGCCCTGACAACTTCGTCTTCGGTCAATCCGGTGCCGGAAACAACTGGGCCAAGGGT-- Pestalotiopsis_kunmingensis -----------------------------TGGTATGTACCCCCATCGACCTCAACAC-GCCCCGA-CACGACGCCTCCCG-CAACCCGACAACGCGGCGTTCTCAAC---TACTCGGTTGGAACCAAACGAAAGACTTGATACTGACCAGTCTTTGATAGGCAAACCATTTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTACGTACCCTTTCATTGGCTCCTTGCTTTCTCATGG-ACATGTTGACTAACACTCGCGGTTGTTCAGCTACAACGGTACCTCTGAGCTCCAGCT-CGAGCGCATGAGCGTCTACTTCAACGAGGCTTCCGGCAACAAGTACGTTCCTCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGC-CGTCCGCGCCGGT---CCTTTCGGTCAGCTCTTCCGCCCTGACAACTTCGTCTTCGGTCAGTCCGGTGCCGGAAACAACTGGGCCAAGGGT-- Pestalotiopsis_lawsoniae -----------------------------TGGTATGTAGCCC-ATCTACCTCGACGC-GCCTCAA-TACGACACCCCC-GGCAGCTCGACAACG--AAATTCTCAAC---TGCTTGTTTGGAACCATACGAAAGACTTGATACTGACCGGTCTATGATAGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTACGTACCCTTTCCCTGGCTACTCGCTTTCTCGTGA-ACATGTCAGCTAACAGTCGTGCTTGTTCAGCTACAACGGTACCTCTGAGCTCCAGCT-CGAGCGCATGAGCGTCTACTTCAACGAGGCTTCCGGCAACAAGTACGTTCCTCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGC-CGTCCGCGCCGGT---CCTTTCGGTCAGCTCTTCCGCCCTGACAACTTCGTTTTCGGTCAGTCCGGTGCCGGAAACAACTGGGCCAAGGGT-- Pestalotiopsis_mangifolia ------------------------------GGTATGTAGCCC-ATCTACCTCGACGC-GCCTCAA-TACGACACCCCCGG-CAACTCGACAACG--ACATTCTCAAC---TGCCTGGTTGGAACCATACGAAAGACTTGATACTGACCGGTCTATGATAGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTACGTACCCTTTCCCTGGCTACTCGCTTTCTCGTGA-ACATGTCAGCTAACAGTCGTGCTTGTTCAGCTACAACGGTACCTCCGAGCTCCAGCT-CGAGCGCATGAGCGTCTACTTCAACGAGGCTTCCGGCAACAAGTACGTTCCTCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGC-CGTCCGCGCCGGT---CCTTTCGGTCAGCTCTTCCGCCCTGACAACTTCGTCTTCGGTCAGTCTGGTGCCGGAAACAACTGGGCCAAGGGT-- Pestalotiopsis_microspora -----------------------------TGGTATGTAGCCC-ATCTACCTCGACGC-GCCTCAA-TACGACACCCCCGGGCAACTCGACCACG--ATAATCTCAAC---TGCTTGGTTGGAACCATACGAAAGACTCGATACTGACCGGTCTATGATAGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTACGTACCCTTTCCCTGGCTGTTCGCTTTCTCGTGA-ACATGTCAGCTAACAGTCGTGCTTGTTCAGCTACAACGGTACCTCCGAGCTCCAGCT-CGAGCGCATGAGCGTCTACTTCAACGAGGCTTCCGGCAACAAGTACGTTCCTCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGC-CGTCCGCGCCGGT---CCTTTCGGTCAGCTCTTCCGCCCTGACAACTTCGTCTTCGGTCAGTCCGGTGCCGGAAACAACTGGGCCAAGGGT-- Pestalotiopsis_neglecta -----------------------------TGGTATGTAGCCC-ATCTACCTCGACGC-GCCTCAA-TACGACACCCCCGG-CAACTCGACCACG--ATAATCTCAAC---TGCTTGGTTGGAACCATACGAAAGACTCGATACTGACCGGTCTATGATAGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTACGTACCCTTTCCCTGGCTGTTCGCTTTCTCGTGA-ACATGTCAGCTAACAGTCGTGCTTGTTCAGCTACAACGGTACCTCCGAGCTCCAGCT-CGAGCGCATGAGCGTCTACTTCAACGAGGCTTCCGGCAACAAGTACGTTCCTCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGC-CGTCCGCGCCGGT---CCTTTCGGTCAGCTCTTCCGCCCTGACAACTTCGTCTTCGGTCAGTCCGGTGCCGGAAACAACTGGGCCAAGGGT-- Pestalotiopsis_olivacea -----------------------------------ATAGCCC-ATCTACCTCGACGC-GCCTCAA-TACGACACCACCGG-CAACTCGACAACG--ACATTCTCAAC---TGCTTGGTTGAAACCAAAAGAAAGACCTGATACTGACCGGTCTTTGATAGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTACGTACCCTTTCCCTGGCTACTCGTTTTTCCACGA-ACATGTCAGCTAACAGTCGTGCTTGTTCAGCTACAACGGTACCTCCGAGCTCCAGCT-CGAGCGCATGAGCGTCTACTTCAACGAGGCTTCCGGTAACAAGTACGTTCCTCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGC-CGTCCGCGCCGGT---CCTTTCGGTCAGCTCTTCCGCCCTGACAACTTCGTCTTCGGCCAGTCCGGTGCCGGAAACAACTGGGCCAAGGGT-- Pestalotiopsis_paeoniae ----------------------------------TGTTACCT-GTCTGCCTCGACACGGCCTTAC-TACGACGTTTTTCG-TGCCTGCACGACGGCCCCG-AACAGT--GAAATAGGTCA-AGATAGAGGG--AACATGATACTAATAGGTCATTTATAGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTATGTACTAACTTCAATTCCTCCTGCTTCCTGTTGA-GTTTGTAGGCTGAC-TCGATGGCCATTTAGCTACAACGGTACCTCCGAGCTCCAGCT-CGAGCGTATGAGCGTCTACTTCAACGAGGCTTCCGGCAACAAGTACGTTCCTCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGC-CGTCCGCGCCGGT---CCCTTCGGCCAGCTCTTCCGCCCTGACAACTTCGTCTTCGGTCAGTCCGGTGCTGGCAACAACTGGGCCAAGGGT-- Pestalotiopsis_paeoniicola -----------------------------TGGTATGTAACCT-GTCTGCCTCGACACGGCCTTGA-TACGACGTTTTTCG-TGCCTGCACGACGGCCCCG-AACAGT--GAATTAGGTCA-AGATAGAGGG--AACATGATGCTAATAGGTCATTGATAGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTATGTACTATTTTCAATTCCTCCTGCTTCCTGTTGA-GCTTGTAGGCTGAC-TCGATGGCCATTTAGCTACAACGGTACCTCCGAGCTCCAGCT-CGAGCGTATGAGCGTCTACTTCAACGAGGCTTCCGGTAACAAGTACGTTCCTCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGC-CGTCCGCGCCGGT---CCCTTCGGCCAGCTCTTCCGCCCTGACAACTTCGTCTTCGGTCAGTCCGGTGCTGGCAACAACTGGGCCAAGGGT-- Pestalotiopsis_photiniae --------------------------------TATGTAACCT-GTCTGTCTCGACACGGCCTCAA-TACGACGTTTTTCG-TGCCTGCACGACGGCCCCG-AACAGT--GAATTAGGTCA-AGATAGAGGG--AACATGATGCTAATAGGTCATTGATAGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTATGTACTATTTTTAATTCCTCCTGCTTCCTGTTAA-GCTTGTAGGCTGAC-TCGATGGCCATTTAGCTACAACGGTACCTCCGAGCTCCAGCT-CGAGCGTATGAGCGTCTACTTCAACGAGGCTTCCGGCAACAAGTACGTTCCTCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGC-CGTCCGCGCCGGT---CCCTTCGGCCAGCTCTTCCGCCCTGACAACTTCGTCTTCGGTCAGTCCGGTGCTGGCAACAACTGGGCCAAGGGT-- Pestalotiopsis_subcuticularis ----------------------------------TGTAATCT-GTCTGCCTCGACACGGCCTCAA-TACGACGTTTTTCG-TGCCTGCACGACGGCCCCGGATCAGT--GAATTAGGTCA-AGATACAGGGG-AACATGACGCTAATAGGTCATTTATAGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTATGTACTATTTTCAATTCCTCCTGCTTCCTGTTGA-GCTTGTAGGCTGAC-TCGATGGCCATTTAGCTACAACGGTACCTCCGAGCTCCAGCT-CGAGCGTATGAGCGTCTACTTCAACGAGGCTTCCGGCAACAAGTACGTTCCTCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGC-CGTCCGCGCCGGT---CCCTTCGGCCAGCTCTTCCGCCCTGACAACTTCGTCTTCGGTCAGTCCGGTGCTGGCAACAACTGGGCCAAGGGT-- Pestalotiopsis_theae --------------------------------TATGTATCCT-ATCTACCTCGGCATTGCCTCGA-TATGACGCCTTTTGACGAGTCTACGACGACCTTG-AACGCT--TGATTAGGTCACGGATAAA-----AACACGACGCTAATGGGTCATTGATAGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTACGTACCATCTCC---TCCGATTACTTCTTGTTGA-GCACACGAACTAAC-TTGTGGCCTTGTTAGCTACAACGGTACCTCCGAGCTCCAGCT-CGAGCGCATGAGTGTCTACTTCAATGAGGCTTCCGGCAACAAGTACGTCCCTCGTGCCGTTCTCGTCGATCTCGAGCCTGGTACCATGGATGC-CGTTCGCGCCGGT---CCCTTCGGTCAGCTTTTCCGCCCTGACAACTTCGTCTTCGGTCAGTCCGGTGCTGGCAACAACTGGGCCAAGGGT-- Pestalotiopsis_versicolor ---------------------------------ATGTAACCT-GTCTGTCTCGACACGGCCTCAA-TACGACGTTTTTCG-TGCCTGCACGACAGCCCCG-AACAGT--GAATTAGGTCA-AGATAGAGGG--AACATGATGCTAATAGGTCATTGATAGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTATGTACTATTTTCAATTCCTCCTGCTTCCTGTTGA-GCTTGTAGGCTGAC-TCGATGGCCATTTAGCTACAACGGTACCTCCGAGCTCCAGCT-CGAGCGTATGAGTGTCTACTTCAACGAGGCTTCCGGCAACAAGTACGTTCCTCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGC-CGTCCGCGCCGGT---CCCTTCGGCCAGCTCTTCCGCCCTGACAACTTCGTCTTCGGTCAGTCCGGTGCTGGCAACAACTGGGCCAAGGGT-- Pestalotiopsis_westerdikii ------------------------------------TAATCT-GTCTGCCTCGACACGGCCTTGA-TACGACGTTTTTCG-TGCCTGCACGACGGCCCCG-ATCAGT--GAATTAGGTCA-AGATACAGGGG-AACATGATGCTAATAGGTCATTTATAGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTATGTACTATTTTCAATTCCTCCTGCTTCCTGTTGA-GCTTGTAGGCTGAC-TCGATGGCCATTTAGCTACAACGGTACCTCCGAGCTCCAGCT-CGAGCGTATGAGCGTCTACTTCAACGAGGCTTCCGGCAACAAGTACGTTCCTCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGC-CGTCCGCGCCGGT---CCCTTCGGCCAGCTCTTCCGCCCTGACAACTTCGTCTTCGGTCAGTCCGGTGCTGGCAACAACTGGGCCAAGGGT-- Seiridium_cardinale TGCTCCTCTGACCAGCCGTGGTGCTTACTCTTTCCGCGCTGTCACCGTTCCCGAGTT-GACTCAG--CAGATGTTCGACCCCAAGAACATGATGGCTGCCTCCGACTTCCGCAACGGTCGCTACCTGACCTGCTCTGCCATCTTGTAAGTTTACAGCCCGACAATTCATATCTGAGATGTATCAGCT-AACAGTCATGTAGCCGTGGTAAGGTCTCCATGAAGGAGGTCGAGGACCAGATGCGCACCATCCAGAACAAGAACTCGTCGTACTTCGTCGAG----TGGATCCCCAACAACGTGCAGACCGCCCTCTGCTCGATCCCTCCCCGTGGCCTCAAG-ATGTCGTC--TACCTTTGTTGGTAA-CTCGACTGCTATCCAAGAGCTTTTCAAGCGTGTCGGCGAGCAATTCACTGCCATGTTCCGTCGCAAGGCTTTCTTGCATTGGTACACTGGTGAGGGTATGGACGAGATGGAGTTCAC Seiridium_ceratosporum ----------------------------------TGTAATC--AGCATTCTCGAT-----TTCGA-GCCGACGACTTCTCGCAGTCAAACAAAG--ATTTCCACGAC---GATTTTTTTTACCATCTAGGA---ACAGAGTACTGACGGTTCCTATACAGGCAAACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGAGTGTACGTATAATATTCCTCGACAGGATCGATGAGGTGA-AAAT-CAAGCTGAT--CGCATTTTTCACAGCTACAATGGCACCTCGGAGCTTCAGCT-GGAGCGCATGAGCGTCTACTTCAACGAGGCTTCCGGCAACAAGTACGTTCCCCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGACGC-CGTTCGTGCCGGC---CCCTTCGGCCAGCTCTTCCGCCCCGACAACTTCGTTTTCGGTCAATCCGGTGCTGGCAACAACTGGGCCAAGGGT-- ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = 'Beta-tubulin') = N: 1-485; CODONPOSSET CodonPositions (CHARACTERS = 'Beta-tubulin') = N: 1-485; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M1217] TITLE 'ITS1,5.8S,ITS2'; LINK TAXA = Taxa1; DIMENSIONS NCHAR=553; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Pestalotiopsis_aquatica GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCTTTTGTTGCCTCGG-CAGAAGTTA----------------------------------TAG-GTCTT-----------------CTTA-------TAGCTG----CTGCCGGTGGACCATTAAACTCTTGTTATTTTAT-GTAATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAATCTACT-TCTCTTAGGAGTTGTAGTTCCTGAAATACAACGGCGGATTTGTAGTATCCTCTGAGCGTAGTAATTTTT-TTCTCGCTTTTGTTAGGTGCTATAACTCC--CAGCCGCTAAACCCCCAATTT-TTTGTGGTTGACCTCGG Pestalotiopsis_clavispora GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCTTTTGTTGCCTCGG-CAGAAGTTA----------------------------------TAG-GTCTT-----------------CTTA-------TAGCTG----CTGCCGGTGGACCATTAAACTCTTGTTATTTTAT-GTAATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAATCTACT-TCTTTTATTAGTTGTAGTTCCTGAAATACAACGGCGGATTTGTAGTATCCTCTGAGCGTAGTAATTTTTTT-CTCGCTTTTGTTAGGTGCTATAACTCC--CAGCCGCTAAACCCCCAATTT-TTTGTGGTTGACCTCGG Pestalotiopsis_conigena GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCTTTTGTTGCCTCGG-CAGAAGTTA----------------------------------TAG-GTCTT-----------------CTTA-------TAGCTG----CTGCCGGTGGACCATTAAACTCTTGTTATTTTAT-GTAATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAATCTACT-TCTCTTAGGAGTTGTAGTTCCTGAAATACAACGGCGGATTTGTAGTATCCTCTGAGCGTAGTAATTTTT-TTCTCGCTTTTGTTAGGTGCTATAACTCC--CAGCCGCTAAACCCCCAATTT-TTTGTGGTTGACCTCGG Pestalotiopsis_crassiuscula GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCTTTTGTTGCCTCGG-CAGAAGTTA----------------------------------TAG-GTCTT-----------------CTTA-------TAGCTG----CTGCCGGTGGACCATTAAACTCTTGTTATTTTAT-GTAATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAATCTACT-TCTCTTAGGAGTTGTAGTTCCTGAAATACAACGGCGGATTTGTAGTATCCTCTGAGCGTAGTAATTTTTTTTCTCGCTTTTGTTAGGTGCTATAACTCC--CAGCCGCTAAACCCCCAATTT-TTTGTGGTTGACCTCGG Pestalotiopsis_disseminata GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCA-TTGTTGCCTCGG-CAGAAGCTGCTCGGTACACCTTACCTTGGAACGGCCTACCCTGTAGCGCCTTACCCTGGAACGGCTTACCCTG-------TAACGG----CTGCCGGTGGACTACCAAACTCTTGTTATTTTATTGTAATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAGCCTACT-GCTTTTACTAGCTGTAGCTCCTGAAATACAACGGCGGATCTGCGATATCCTCTGAGCGTAGTAA-TTTTTATCTCGCTTTTGACTGGAGTTGCAGCGTCTTTAGCCGCTAAATCCCCCAATTTTTAATGGTTGACCTCGG Pestalotiopsis_gracilis GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCTTTTGTTGCCTCGG-CAGAAGTTA----------------------------------TAG-GTCTT-----------------CTTA-------TAGCTG----CTGCCGGTGGACCATTAAACTCTTGTTATTTTAT-GTAATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAATCTACT-TCTTT--ATAGTTGTAGTTCCTGAAATACAACGGCGGATTTGTAGTATCCTCTGAGCGTAGTAATTTTT-TTCTCGCTTTTGTTAGGTGCTATAACTCC--CAGCCGCTAAACCCCCAATTT-TTTGTGGTTGACCTCGG Pestalotiopsis_hainanensis GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCA-TTGTTGCCTCGG-CAGAAGCTACCTGGTT-ACCTTACCTTGGAACGGCCTACCCTGTAGCGCCTTACCCTGGAACGGCCTACCCTGG------TAACGG----CTGCCGGTGGACTACCAAACTCTTGTTATTATATTGTAATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAGCCTACT-GCTTTTGCTAGCGGTAGCTCCTGAAATACAACGGCGGATCTGCGATATCCTCTGAGCGTAGTAATTTTTAT-CTCGCTTTTGACTGGAGTTGCAGCGTCTTTAGCCGCTAAACCCCCCAATTTTTAATGGTTGACCTCGG Pestalotiopsis_heterocornis_1 GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCA-TTGTTGCCTCGG-CAGAAGCTGCTCGGCGCGCCTTACTTTGGAACGGCCTACCCTGTAGCGCCTTACCCTGGAACGGCTTACCCTG-------CAACGG----CTGCCGGTGGACTACCAAACTCTTGTTATTTTATGGTTATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAGCCTACT-GCTTTTGCTAGCTGTAGCTCCTGAAATACAACGGCGGATCTGCGATATCCTCTGAGCGTAGTAA-TTTTTATCTCGCTTTTGACTGGAGTTGCAGCGTCTTTAGCCGCTAAACCCCCCAATTTTTAATGGTTGACCTCGG Pestalotiopsis_heterocornis_2 GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCA-TTGTTGCCTCGG-CAGAAGCTGCTCGGCGCGCCTTACCTTGGAACGGCCTACCCTGTAGCGCCTTACCCTGGAACGGCTTACCCTG-------CAACGG----CTGCCGGTGGACTACCAAACTCTTGTTATTTTATAGTTATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAGCCTACT-GCTTTTGCTAGCTGTAGCTCCTGAAATACAACGGCGGATCTGCGATATCCTCTGAGCGTAGTAA-TTTTTATCTCGCTTTTGACTGGAGTTGCAGCGTCTTTAGCCGCTAAACCCCCCAATTTTTAATGGTTGACCTCGG Pestalotiopsis_heterocornis_3 GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCA-TTGTTGCCTCGG-CAGAAGCTGCTCGGTGCACCTTACCTTGGAACGGCCTACCCTGTAGCGCCTTACCCTGGAACGGCTTACCCTG-------CAACGG----CTGCCGGTGGACTACCAAACTCTTGTTATTTTATGGTTATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAGCCTACT-GCTTTTGCTAGCTGTAGCTCCTGAAATACAACGGCGGATCTGCGATATCCTCTGAGCGTAGTAA-TTTTTATCTCGCTTTTGACTGGAGTTGCAGCGTCTTTAGCCGCTAAACCCCCCAATTTTTAATGGTTGACCTCGG Pestalotiopsis_jesteri GGGATCATTATAGAGTTTTTCAAACTCCCAA-CCCATGTGAACTTACCA-CTGTTGCCTCGG-CAGAGGCTACCCGGTA---CCTACCTCGGAACGGCCTACCCTGTAGCGCCTTACCTGGGAGCGG-TTACCCTG-------TAGCGG----CTGCCGGTGGACTACCAAACTCTTGTTATTTTATTGTAATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAGCCTACTAGCCCTCGCGGCCTGTAGCTCCTGAAATACAACGGCGGATCTGCGATATCCTCTGAGCGTAGTAATCTTACCTCTCGCTTTTGTCAGGATTCCCAGCATC--TAGCCGCTAAACCCCCCAATTTTTAATGGTTGACCTCGG Pestalotiopsis_karstenii_1 GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCA-TTGTTGCCTCGG-CAGAAGCTACCCGGT--ACCTTACCTTGGAACGGCCTACCCTGTAGCGCCTTACCCTGGAACGGCTTACCCTG-------TAACGG----CTGCCGGTGGACTACCAAACTCTTGTTATTTTATTGTTATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAGCCTACT-GCTTTTGCTAGCTGTAGCTCCTGAAATACAACGGCGGATCTGCGATATCCTCTGAGCGTAGTAATTTTTTTTCTCGCTTTTGACTGGAGTTGCAGCGTCTTTAGCCGCTAAATCCCCCAATTTTTAATGGTTGACCTCGG Pestalotiopsis_karstenii_2 GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCA-TTGTTGCCTCGG-CAGAAGCTACCCGGT--ACCTTACCTTGGAACGGCCTACCCTGTAGCGCCTTACCCTGGAACGGCTTACCCTG-------TAACGG----CTGCCGGTGGACTACCAAACTCTTGTTATTTTATTGTTATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAGCCTACT-GCTTTTGCTAGCTGTAGCTCCTGAAATACAACGGCGGATCTGCGATATCCTCTGAGCGTAGTAATTTTTTTTCTCGCTTTTGACTGGAGTTGCAGCGTCTTTAGCCGCTAAATCCCCCAATTTTTAATGGTTGACCTCGG Pestalotiopsis_karstenii_3 GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCA-TTGTTGCCTCGG-CAGAAGCTACCCGGT--ACCTTACCTTGGAACGGCCTACCCTGTAGCGCCTTACCCTGGAACGGCTTACCCTG-------TAACGG----CTGCCGGTGGACTACCAAACTCTTGTTATTTTATTGTTATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAGCCTACT-GCTTTTGCTAGCTGTAGCTCCTGAAATACAACGGCGGATCTGCGATATCCTCTGAGCGTAGTAATTTTTTTTCTCGCTTTTGACTGGAGTTGCAGCGTCTTTAGCCGCTAAATCCCCCAATTTTTAATGGTTGACCTCGG Pestalotiopsis_kunmingensis GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCAATTGTTGCCTCGG-CAGAGGCTACCCGGT--ACCTTACCTTGGTGCGGCCTACCCTGTAGCGCCTTACCCTGGAACGGGCTACCCTG-------TAGCGG----CTGCCGGTGGACTACCAAACTCTTGTTATTTTATGGTTATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAGCCTACT-GCTTTTACTAGCTGTAGCTTCTGAAATACAACGGCGGATCTGCGATATCCTCTGAGCGTAGTAAATTTTTTTCTCGCTTTTGACTGGAGTTGCAGCGTCTTTAGCCCCTTAACCCCCCAATTTTTAATGGGTGGCCTCGG Pestalotiopsis_lawsoniae GGGATCATTATAGAGTTTTTTAAACTCCCAA-CCCATGTGAACTTACCA-TTGTTGCCTCGG-CAGAAGCGGCTCGGTGCACCTTACCCTGGAACGGCCTACCCTGTAGCGCCTTACCCTGGAACGGCCTACCCTG-------TAGCGG----CTGCCGGTGGACTACCAAACTCTTGTTATTGTATTGTAATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAGCCTACT-GCTTTTACTAGCTGTAGCTCCTGAAATACAACGGCGGATCTGCGATATCCTCTGAGCGTAGTAAATTTTTATCTCGCTTTTGACTGGAGTTGCAGCGTCTTTAGCCGCTAAATCCCCCAATTTTTAATGGTTGACCTCGG Pestalotiopsis_mangifolia GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCA-TTGTTGCCTCGG-CAGAAGCTGCTCGGTGCACCTTACCTTGGAACGGCCTACCCTGTAGCGCCTTACCCTGGAACGGCTTACCCTG-------TAGCGG----CTGCCGGTGGACTACCAAACTCTTGTTATTTTATTGTAATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAGCCTACT-GCTTTTACTAGCTGTAGCTCCTGAAATACAACGGCGGATCTGTGATATCCTCTGAGCGTAGTAA-TTTTTATCTCGCTTTTGACTGGAGTTGCAGCGTCTTTAGCCGCTAAATCCCC-AATTTTTAATGGGTGACCTCGG Pestalotiopsis_microspora GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCA-TTGTTGCCTCGG-CAGAAGCTGCTCGGTGCACCCTACCTTGGAACGGCCTACCCTGTAGCGCCTTACCCTGGAACGGCTTACCCTG-------TAACGG----CTGCCGGTGGACTACCAAACTCTTGTTATTTTATTGTAATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAGCCTACT-GCTTTTGCTAGCTGTAGCTCCTGAAATACAACGGCGGATCTGCGATATCCTCTGAGCGTAGTAAATTTTTATCTCGCTTTTGACTGGAGTTGCAGCGTCTTTGGCCGCTAA-TCCCCCAATTTTTAATGGTTGACCTCGG Pestalotiopsis_neglecta GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCA-TTGTTGCCTCGG-CAGAAGCTGCTCGGTGCACCCTACCTTGGAACGGCCTACCCTGTAGCGCCTTACCCTGGAACGGCTTACCCTG-------TAACGG----CTGCCGGTGGACTACCAAACTCTTGTTATTTTATTGTAATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAGCCTACT-GCTTTTGCTAGCTGTAGCTCCTGAAATACAACGGCCGATCTGCGATATCCTCTGAGCGTAGTAAATTTT-ATCTCGCTTTTGACTGGAGTTGCAGCGTCTTTGGCCGCTAAATCCCCCAATTTTTAATGGTTGACCTCGG Pestalotiopsis_olivacea GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCA-TTGTTGCCTCGG-CAGAAGCTGCTCGGTACACCTTACCTTGGAACGGCCTACCCTGTAGCGCCTTACCCTGGAACGGCTTACCCTG-------TAACGG----CTGCCGGTGGACTACCAAACTCTTGTTATTTTATTGTAATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAGCCTACT-GCTTTTACTAGCTGTAGCTCCTGAAATACAACGGCGGATCTGCGATATCCTCTGAGCGTAGTAA-TTTTTATCTCGCTTTTGACTGGAGTTGCAGCGTCTTTAGCCGCTAA-TCCCCCAATTTTTAATGGTTGACCTCGG Pestalotiopsis_paeoniae GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCTTTTGTTGCCTCGG-CAGAAGTTA----------------------------------TAG-GTCTT-----------------CTTA-------TAGCTG----CTGCCGGTGGACCATTAAACTCTTGTTATTTTAT-GTAATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTATTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAATCTACT-TCTCTTAGGAGTTGTAGTTCCTGAAATACAACGGCGGATTTGTAGTATCCTCTGAGCGTAGTAATTTTCCTTCTCGCTTTTGTTAGGTGCTATAACTCC--CACCCGCTCGACCCCCAATTTATTTGTGGTTGACCTCGG Pestalotiopsis_paeoniicola GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCTTTTGTTGCCTCGG-CAGAAGTTA----------------------------------TAG-GTCTT-----------------CTTA-------TAGCTG----CTGCCGGTGGACCATTAAACTCTTGTTATTTTAT-GTAATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAATCTACT-TCTTTTATTAGTTGTAGTTCCTGAAATACAACGGCGGATTTGTAGTATCCTCTGAGCGTAGTAATTTTTTT-CTCGCTTTTGTTAGGTGCTATAACTCC--CAGCCGCTAAACCCCCAATTT-TTTGTGGTTGACCTCGG Pestalotiopsis_photiniae GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCTTTTGTTGCCTCGGGCAGAAGTTA----------------------------------TAG-GTCTT-----------------CTTA-------TAGCTG----CTGCCGGTGGACCATTAAACTCTTGTTATTTTAT-GTAATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAATCTACT-TCTTTTATTAGTTGTAGTTCCTGAAATACAACGGCGGATTTGTAGTATCCTCTGAGCGTAGTAATTTTTTTTCTCGCTTTTGTTAGGTGCTATAACTCC--CAGCCGCTAAACCCCCAATTT-TTTGTGGTTGACCTCGG Pestalotiopsis_rhododendri GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCTTTTGTTGCCTCGG-CAGAAGTTA----------------------------------TAG-GTCTT-----------------CTTA-------TAGCTG----CTGCCGGTGGACCATTAAACTCTTGTTATTTTAT-GTAATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAATCTACT-TCTCTTAGGAGTTGTAGTTCCTGAAATACAACGGCGGATTTGTAGTATCCTCTGAGCGTAGTAATTTTT-TTCTCGCTTTTGTTAGGTGCTATAACTCC--CAGCCGCTAAACCCCCAATTT-TCTGTGGTTGACCTCGG Pestalotiopsis_subcuticularis GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCTTTTGTTGCCTCGG-CAGAAGTTA----------------------------------TAG-GTCTT-----------------CTTA-------TAGCTG----CTGCCGGTGGACCATTAAACTCTTGTTATTTTAT-GTAATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAATCTACT-TCTCTTAGGAGTCGTAGTTCCTGAAATACAACGGCGGATTTGTAGTATCCTCTGAGCGTAGTAATTTTT-TTCTCGCTTTTGTTAGGTGCTATAACTCC--CAGCCGCTAAACCCCCAATTT-TTTGTGGTTGACCTCGG Pestalotiopsis_theae GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCTTTTGTTGCCTCGG-CAGAGGTTACCTGGTA---CCTG----------------------------------GAGACAGGTTACCCTG-------TAGCAG----CTGCCGGTGGACTACTAAACTCTTGTTATTTTAT-GTAATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAATTTACA---------GTTATGTAATTCCTGAAATACAACGGCGGATCTGTGGTATCCTCTGAGCGTAGTAAATTATT-TCTCGCTTTTGTTAGGTGCTGCAGCTCC--CAGCCGCTAAACCCCCAA-TTTTTTGTGGTTGACCTCGG Pestalotiopsis_versicolor GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCTTTTGTTGCCTCGG-CAGAAATTA----------------------------------TAG-GTCTT-----------------CTTA-------TAGCTG----CTGCCGGTGGACCATTAAACTCTTGTTATTTTAT-GTAATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAATCTACT-TCTCTTAGGAGTTGTAGTTCCTGAAATACAACGGCGGATTTGTAGTATCCTCTGAGCGTAGTAATTTTT-TTCTCGCTTTTGTTAGGTGCTATAACTCC--CAGCCGCTAAACCCCCAATTT-TTTGTGGTTGACCTCGG Pestalotiopsis_westerdijkii GGGATCATTATAGAGTTTTCTAAACTCCCAA-CCCATGTGAACTTACCTTTTGTTGCCTCGG-CAGAAGTTA----------------------------------TAG-GTCTT-----------------CTTA-------TAGCTG----CTGCCGGTGGACCATTAAACTCTTGTTATTTTAT-GTAATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTGTTGGGAATCTACT-TCTTTCATTAGTTGTAGTTCCTGAAATACAACGGCGGATTTGTAGTATCCTCTGAGCGTAGTAATTTTTTT-CTCGCTTTTGTTAGGTGCTATAACTCC--CAGCCGCTAAACCCCCAATTT-TTTGTGGTTGACCTCGG Seiridium_cardinale GGGATCATTACAGAGTTATCCAACTCCCAAAACCCATGTGAACTTACCTTT-GTTGCCTCGG-CAGAAGCTACCTG-TA---CCTACC-TGGAACAGCCTACC-TGGAGCGATCC-----GGGCTGGCCTACCTGGAACGGTCTGGTGGTCGACTGCCGGTGGACCATTCAACTCTTGTTATTTTATTGTAATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTATTGGGAGTCTACT---------GTATTGTAGTTCCTCAAATCCAACGGCGGATCTGTGGTATCCTCTGAGCGTAGTAAATTTTTATCTCGCTTTTGTCAGGTGCTGCAGCTCC--CAGCCGCTAAACCCCCAAATTTTTAATGGTTGACCTCGG Seiridium_ceratosporum GGGATCATTACAGAGTTTTCTAACTCCCAAA-CCCATGTGAACTTACCTTT-GTTGCCTCGG-CAGAAGCTACCCGGTA---CCTACCCTGTAACAGTTACCC-TGTATCG-CAC-----GGCTCGGGTTACCCTG-------TAGCAATATTCTGCCGGTGGACTATTCAACTCTTGTTATTTTATTGTAATCTGAGCGTCTTATTTTAATAAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTAGCTTAGTATTGGGAATCTACT---------ATATTGTAGTTCCTCAAATCCAACGGCGGATCTGTGGTATCCTCTGAGCGTAGTAAATTTTTATCTCGCTTTTGTTAGGTGCTGCAGCTCC--CAGCCGCTAAACCCCCAA-TTTTTAATGGTTGACCTCGG ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = 'ITS1,5.8S,ITS2') = N: 1-553; CODONPOSSET CodonPositions (CHARACTERS = 'ITS1,5.8S,ITS2') = N: 1-553; END; BEGIN TREES; TITLE Tb7827; LINK TAXA = Taxa1; TRANSLATE 1 Pestalotiopsis_theae, 2 Seiridium_ceratosporum, 3 Seiridium_cardinale, 4 Pestalotiopsis_jesteri, 5 Pestalotiopsis_kunmingensis, 6 Pestalotiopsis_hainanensis, 7 Pestalotiopsis_karstenii_2, 8 Pestalotiopsis_karstenii_3, 9 Pestalotiopsis_karstenii_1, 10 Pestalotiopsis_heterocornis_3, 11 Pestalotiopsis_heterocornis_2, 12 Pestalotiopsis_heterocornis_1, 13 Pestalotiopsis_microspora, 14 Pestalotiopsis_neglecta, 15 Pestalotiopsis_lawsoniae, 16 Pestalotiopsis_mangifolia, 17 Pestalotiopsis_olivacea, 18 Pestalotiopsis_disseminata, 19 Pestalotiopsis_westerdijkii, 20 Pestalotiopsis_paeoniicola, 21 Pestalotiopsis_photiniae, 22 Pestalotiopsis_clavispora, 23 Pestalotiopsis_gracilis, 24 Pestalotiopsis_subcuticularis, 25 Pestalotiopsis_aquatica, 26 Pestalotiopsis_conigena, 27 Pestalotiopsis_rhododendri, 28 Pestalotiopsis_crassiuscula, 29 Pestalotiopsis_versicolor, 30 Pestalotiopsis_paeoniae; TREE Fig._2 = [&R] (((1,(30,29,28,27,26,25,24,(23,22,21,20,19))),(4,(5,((18,17,(16,15),(14,13),(10,(12,11))),(6,(9,8,7)))))),(3,2)); END; BEGIN TREES; TITLE Tb7828; LINK TAXA = Taxa2; TRANSLATE 1 Seiridium_cardinale, 2 Seiridium_ceratosporum, 3 Pestalotiopsis_theae, 4 Pestalotiopsis_paeoniicola, 5 Pestalotiopsis_clavispora, 6 Pestalotiopsis_versicolor, 7 Pestalotiopsis_photiniae, 8 Pestalotiopsis_aquatica, 9 Pestalotiopsis_conigena, 10 Pestalotiopsis_subcuticularis, 11 Pestalotiopsis_crassiuscula, 12 Pestalotiopsis_paeoniae, 13 Pestalotiopsis_westerdikii, 14 Pestalotiopsis_kunmingensis, 15 Pestalotiopsis_heterocornis_1, 16 Pestalotiopsis_heterocornis_2, 17 Pestalotiopsis_heterocornis_3, 18 Pestalotiopsis_hainanensis, 19 Pestalotiopsis_olivacea, 20 Pestalotiopsis_mangifolia, 21 Pestalotiopsis_microspora, 22 Pestalotiopsis_neglecta, 23 Pestalotiopsis_disseminata, 24 Pestalotiopsis_lawsoniae, 25 Pestalotiopsis_karstenii_3, 26 Pestalotiopsis_karstenii_2, 27 Pestalotiopsis_karstenii_1; TREE Fig._3 = [&R] ((((((27,26),25),((18,(19,(20,(24,23),(22,21)))),(15,(17,16)))),14),(3,((12,(13,(11,10,9,8))),(7,6),(5,4)))),(2,1)); END;