#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on April 23, 2024; 6:46 GMT

TreeBASE (cc) 1994-2008

Study reference:
Carmaran C., Romero A., & Giussani L. 2006. An approach towards a new phylogenetic
classification in Diatrypaceae. Fungal Diversity, null.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S1571]

BEGIN TAXA;
        TITLE  Taxa1;
        DIMENSIONS NTAX=27;
        TAXLABELS
            Cryptosphaeria_lignyota
            Cryptosphaeria_sulcata
            Diatrype_albopruinosa
            Diatrype_chlorosarcha
            Diatrype_disciformis
            Diatrype_flavovirens
            Diatrype_patagonica
            Diatrype_phaselina
            Diatrype_sp
            Diatrype_spilomea
            Diatrype_stigmoides
            Echinomyces_obesa
            Eutypa_lata
            Eutypa_lejoplaca
            Eutypa_leptoplaca
            Eutypa_spinosa
            Eutypella_arecae
            Eutypella_atropae
            Eutypella_aulacostroma
            Eutypella_canodisca
            Eutypella_cerviculata
            Eutypella_comosa
            Eutypella_gliciridae
            Eutypella_leprosa
            Eutypella_scoparia
            Kretzchmaria_clavus
            Kretzchmaria_sigmoidea
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M1221]

	TITLE Diatrypaceae;
	LINK TAXA = Taxa1;
	DIMENSIONS NCHAR=36;
	FORMAT DATATYPE=Standard SYMBOLS= "0 1 2 3 4 5 6 7 8 9" MISSING=? GAP= -;

MATRIX
[                                   10        20        30        40        50 ]
[                                    .         .         .         .         . ]
Cryptosphaeria_lignyota     010000001010001100010010111{01}11010000
Cryptosphaeria_sulcata      010000000010011100010010012321000000
Diatrype_albopruinosa       00001100101012110001001011{12}{23}21010000
Diatrype_chlorosarcha       00101001{01}010{01}21100010010111{12}11010200
Diatrype_disciformis        000011001010021100010010111{01}11010000
Diatrype_flavovirens        001000101010021100010010111011010100
Diatrype_patagonica         001001000010021100010010112211010000
Diatrype_phaselina          001000100010021010000110111111010?00
Diatrype_sp                 001000100010021100010010012321000100
Diatrype_spilomea           000101001110{01}2110001001011{01}011010000
Diatrype_stigmoides         000101001010{01}2110001001011{01}{01}11010000
Echinomyces_obesa           00000100{01}011221001001010{01}10011020000
Eutypa_lata                 100000001010110100010010011011010100
Eutypa_lejoplaca            10000000{01}110{01}21100010010{01}1{01}011010100
Eutypa_leptoplaca           100000000010121100010010111011010100
Eutypa_spinosa              10000000101112110001001011{01}{01}11010100
Eutypella_arecae            001001000001111001001010011011010100
Eutypella_atropae           001000001000021100010010111011010200
Eutypella_aulacostroma      0010010000{01}0{01}21100010010111{01}11010200
Eutypella_canodisca         001001001010021100010010112321000000
Eutypella_cerviculata       0010010010{01}1{01}21100010010{01}1{01}{01}11010200
Eutypella_comosa            1000000010{01}1{12}21001001010{01}10{01}11010200
Eutypella_gliciridae        010000001001221001000010011011010000
Eutypella_leprosa           0010010010{01}0{01}21100010010111{12}11010000
Eutypella_scoparia          0100000010{01}1{12}21001001010{01}10011010200
Kretzchmaria_clavus         0000000000100200001000011034201-1111
Kretzchmaria_sigmoidea      0000000000100200001000011034201-1111
;
END;

BEGIN TREES;
      TITLE Tb7830;
      LINK TAXA = Taxa1;
         TRANSLATE
            1    Eutypella_arecae,
            2    Eutypella_gliciridae,
            3    Eutypa_leptoplaca,
            4    Eutypella_canodisca,
            5    Diatrype_sp,
            6    Eutypa_lata,
            7    Eutypella_aulacostroma,
            8    Eutypella_leprosa,
            9    Diatrype_stigmoides,
            10   Diatrype_spilomea,
            11   Eutypa_spinosa,
            12   Eutypa_lejoplaca,
            13   Eutypella_comosa,
            14   Eutypella_scoparia,
            15   Eutypella_cerviculata,
            16   Diatrype_chlorosarcha,
            17   Diatrype_disciformis,
            18   Echinomyces_obesa,
            19   Eutypella_atropae,
            20   Diatrype_patagonica,
            21   Cryptosphaeria_lignyota,
            22   Cryptosphaeria_sulcata,
            23   Diatrype_flavovirens,
            24   Diatrype_albopruinosa,
            25   Diatrype_phaselina,
            26   Kretzchmaria_sigmoidea,
            27   Kretzchmaria_clavus;
      TREE Fig._21A = [&R] (27,(26,(25,24,23,21,20,19,17,16,15,12,11,8,7,6,3,(4,(22,5)),(18,14,13,2,1),(10,9))));
      TREE Fig._20 = [&R] (27,(26,(25,((((23,(19,(15,(7,(16,(8,(20,(24,(4,(22,5)))))))))),(21,(17,(10,9)))),(6,(12,(11,3)))),(2,(1,(13,(18,14))))))));



END;
BEGIN TREES;
      TITLE Tb7831;
      LINK TAXA = Taxa1;
         TRANSLATE
            1    Eutypella_arecae,
            2    Eutypella_gliciridae,
            3    Eutypa_leptoplaca,
            4    Eutypella_canodisca,
            5    Diatrype_sp,
            6    Eutypa_lata,
            7    Eutypella_aulacostroma,
            8    Eutypella_leprosa,
            9    Diatrype_stigmoides,
            10   Diatrype_spilomea,
            11   Eutypa_spinosa,
            12   Eutypa_lejoplaca,
            13   Eutypella_comosa,
            14   Eutypella_scoparia,
            15   Eutypella_cerviculata,
            16   Diatrype_chlorosarcha,
            17   Diatrype_disciformis,
            18   Echinomyces_obesa,
            19   Eutypella_atropae,
            20   Diatrype_patagonica,
            21   Cryptosphaeria_lignyota,
            22   Cryptosphaeria_sulcata,
            23   Diatrype_flavovirens,
            24   Diatrype_albopruinosa,
            25   Diatrype_phaselina,
            26   Kretzchmaria_sigmoidea,
            27   Kretzchmaria_clavus;
      TREE Fig._21B = [&R] (27,(26,(25,((23,21,19,17,15,7,(24,20,16,8,(4,(22,5))),(12,11,6,3),(10,9)),(2,(1,(18,14,13)))))));



END;