#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 19, 2024; 14:21 GMT TreeBASE (cc) 1994-2008 Study reference: Hickey L., & Taylor D. 1991. The leaf architecture of Ticodendron and the application of foliar characters in discerning its relationships. Annals of the Missouri Botanical Garden, 78: 105-130. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S159] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=19; TAXLABELS Acsmithia 'Alnus {1}' 'Alnus {2}' Brunellia Canacomyrica Castanea Castanopsis Ceratopetalum Cunonia Davidsonia Fagopsis Myrica 'Nothofagus {1}' 'Nothofagus {2}' Outgroup_to_Amentiferae Platycarya Pterocarya Rhoiptelea Ticodendron ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M2304] TITLE Table_3; LINK TAXA = Taxa1; DIMENSIONS NCHAR=70; FORMAT DATATYPE=Standard SYMBOLS= "0 1 2 3 4 5 6 7 8" MISSING=? GAP= -; CHARSTATELABELS 1 Leaf_organization / pinnate_compound simple., 2 Leaf_arrangement / opposite alternate., 3 Margin / toothed_in_one_order toothed_in_more_than_one_order., 4 'Tooth shape (apical and basal m' / concave_convex convex_convex concave_concave concave_acuminate acuminate_acuminate concave_straight., 5 Sinus_shape / angular smooth., 6 Position_of_principal_vein_of_t / lateral_toward_apical_sinus medial Ticodendron_NA Betulaceae_NA Fagopsis_NA Fagaceae_NA., 7 Course_of_principal_vein_of_too / epically_deflected nothofagoid_principal_displaced Ticodendron_NA Betulaceae_NA Fagopsis_NA Fagaceae_NA., 8 The_presence_of_veins_associate / both_admedial_and_accessory only_admedial only_accessory Ticodendron_NA Betulaceae_NA Fagopsis_NA Fagaceae_NA., 9 Strength_of_admedial_vein_of_to / same_vein_order lower_vein_order Betulaceae_NA Ticodendron_NA Fagopsis_NA Cunoniaceae_NA Fagaceae_NA., 10 Course_of_conjunctal_veins_clos / none single in_alternate_pairs Ticodendron_NA Betulaceae_NA Fagopsis_NA Fagaceae_NA., 11 'Major vein(s) closest to sinus' / admedial accessory_or_branch principal admedial_and_accessory Ticodendron_NA Betulaceae_NA 'nothofagoid: branch from princi' Fagopsis_NA Fagaceae_NA., 12 Position_of_principal_vein_of_t / Cunoniaceae_NA Nothofagus_NA Brunelliaceae_NA medial., 13 Course_of_principal_vein_of_too / Cunoniaceae_NA Brumelliaceae_NA Nothofagus_NA straight epically_deflected basally_deflected., 14 Presence_of_veins_associated_wi / Cunoniaceae_NA Brumelliaceae_NA Nothofagus_NA both_admedial_and_accessory only_accessory., 15 Strength_of_ademedial_vein_of_t / Cumoniaceae_NA Nothofagus_NA Brunelliaceae_NA Betulaceae_NA Fagopsis_NA lower_vein_order same_vein_order., 16 Course_of_conjumctal_veins_of_t / Cunoniaceae_NA Brumelliaceae_NA Nothofagus_NA m_opposite_pairs in_alternate_pairs none., 17 Fusion_of_principal_and_conjumc / Cunoniaceae_NA Nothofagus_NA Fagopsis_NA Brumelliaceae_NA Fagaceae_NA separate fused., 18 Termmation_of_medial_vein_at_ap / splayed attenuate tapered truncated bulbous., 19 Smus_bracing_of_teeth / not_braced braced_by_convergent_thickened, 20 'Major vein(s) closest to sinus' / Cunoniaceae_NA Brunelliaceae_NA Nothofagus__NA acmedial accessory_or_branch conjunctal_or_branch admedial_and_accessory., 21 Glandularity_of_tooth_apex / glandular_dark glandular_translucent nonglandular., 22 Apical_morphology_of_teeth_m_cl / setaceous simple type., 23 Characteristics_of_the_leaf_bas / doesnt_encircle_axis_stipules_d encircles_the_axis_and_forms_sh, 24 Presence_of_wmgs_on_the_petiole / has_stipules has_both_wmgs_and_stipules no_wmgs_or_stipules., 25 Stipules_deciduous_below_the_se / yes_always_deciduous no_not_usually_deciduous Juglandaceae_NA Myricaceae_NA., 26 Petiob_attachment / envhrged_base_without_stipules enlarged_base_with_portion_of_s without_enhrged_base., 27 Petiole_scar / '3(4) trace-3 lacunar' arc_of_more_than_4_traces no_scars_visible., 28 Stipule_base / not_wider_than_attachment wider_than_attachment luglandaceae_NA Myricaceae_NA., 29 Principal_venation / pinnate_semicraspedodromous craspedodromous., 30 Angle_of_origin_of_lower_basal / with_two_pairs_at_a_lower_angle with_basal_no_different_in_angl with_basal_pair_at_a_lower_angl basal_vein_at_highest_angle_wit actinodromous., 31 Areoles / incomplete imperfect well_developed., 32 Margmal_venaion / incomplete_spiked mcompletely_looped looped., 33 Number_of_deuterals / greater_than_18 1ess_than_or_equal_to_18., 34 'Number of deuterals + opadials' / '19-28' 1ess_than_or_equal_to_18 greater_than_28., 35 'Number of deuterals + opadials' / greater_than_60 '41-60' less_than_or_equal_to_40., 36 Trichome_type / simple 'glanduhr-peltate and simple' 'glandular-peltate' 'T-shaped' Cumoniaceae_NA., 37 Stomate_type / paracytic anomocyic variable., 38 Dehision_of_tooth_tip_in_young / nondeciduous deciduous none., 39 Shape_of_tooth_tip_m_young_expa / short_stout elongate_capitate short_capitate elongate_simple Rhoiptelea_NA Myrica_NA., 40 Direction_of_apex_of_tooth_tip / pointing_abaxially pointing_adaxially in__plane_of_lamina., 41 Branching_of_twigs / straight 'slightly zig-zag' 'zig-zag.', 42 Axillary_buds / 'in plane of leaf base(s)' 'out of phne of leaf base(s).', 43 Uniformity_of_course_of_basal_s / no nearly_so yes., 44 Existence_of_comb_vein / present absent., 45 The_existence_of_mtersecondarie / 'common (greater than 40%)' 'few (3 to 5)' 'rare (1 or 2)' 'none (never any).', 46 Branching_of_secondaries / 'rare (1 or 2)' 'few (3 to 5)' 'common (greater than 40%)' 'none (never any).', 47 Base_of_a_number_of_leaves_asym / none common., 48 In_type_1_teeth / principal_vein_originates_from Ticodendron_NA Fagaceae_NA Betulaceae_NA Fagopsis_NA., 49 Pollen_shape / prolate_spherical suboblate_spherical oblate., 50 Pollen_aperture / corporate porate colpate., 51 Pollen_sculpturing_and_density / reticulate spinulose_moderate spinulose_few striate spinulose_many verrucate 'psilate-perforate.', 52 'Exine type tectate/perforate' / columellate 'columellate-granular.', 53 Exme_proportions / sexme_greater_than_or_equal_to sexine_greater_than_nexme sexine_much_greater_than_nexine, 54 Vessels / scalariform_with_many_bars scahriform_with_few_bars simple_and_scalariform_with_mod simple_and_scahriform_with_few simple, 55 Imperforate_type / 'tracheids and-or fiber-tracheid' tracheids_and_fibers_with_borde fibers_with_bordered_pits fibers_without_bordered_pits., 56 Axile_parenchyma / diffuse banded both other., 57 Rays / 'heterogeneous 1-3+ seriate' 'heterogeneous 1-2 seriate' 'homogeneous 1-2 seriate.', 58 Ray_crystals / no yes., 59 'Bract-bracteole complex off mai' / yes only_bract no., 60 'Bract-bracteole complex fused' / no yes Brunelliaceae__NA., 61 Main_inflorescence_axis / 'branched (panicle cymose)' 'simple unbranched (unbranched c', 62 Structure_m_exile_of_bracteoles / 'inflorescence axis (complex cym' flower licodendron_variable_dependent nothing Davidsonia_NA., 63 Gynoecium / 'apocarpous lateral-admedial' two_syncarpous_and_ascidate_car two_syncarpous_and_ascidate_car three_syncarpous_ascidate_attac two_syncarpous_a_coplicate_late two_syncarpous, 64 Ovule_integuments / apobitegmic apounitegmic hemiunitegmic hemibitegmic., 65 Ovule_morphology / bitegmic_hemianatropous bitegmic_anatropous unitegmic_orthotropous unitegmic_hemianatropous unitegmic_anatropous., 66 Stamen_attachment_and_tip / basal_with_apical_extension basal_without_apical_extension dorsiventrally_fixed_without_ap dorsiventrally_fixed_with_apica, 67 Flowers / bisexual_or_reduced_bisexual unisexual., 68 'Perianth other than bract-bract' / yes_two_whorls no yes_one_whorl., 69 Endosperm / yes no_or_scanty., 70 Ovary / superior 'inferior or semi-inferior.', ; MATRIX [ 10 20 30 40 50 60 70] [ . . . . . . .] Acsmithia 10021100101000000000210000000010020?0000000000100060000000000000100200 'Alnus {1}' 111100001003335550131210010102211001102221000010214110102?011112401211 'Alnus {2}' 111103342453343350141210010111211111102221213313?????????????????????? Brunellia 01020000000343635216211001??00220000110010103321000002330?000003130200 Canacomyrica 111100000103336350161102302302110001125100101100?????????????????????? Castanea 110505566683336342060210100013220001101221003312003013101?000033020211 Castanopsis 110015566683336352062200100011220001101221202312?????????????????????? Ceratopetalum 0000000250200000030000000000021011241001000033000200020201000010030200 Cunonia 000000025020000002100010010002020004?130000000002040000000001140020000 Davidsonia 011301011003335351162100120113200200011000002200100?222000120413120210 Fagopsis 11010445457354452214211001?1112?111?????2121330400500?????0111???011?? Myrica 1104000010034364601621023003012210011252202011001141202001001151211211 'Nothofagus {1}' 110100100061221213022101001100221002111021010300211103301?0111?2401211 'Nothofagus {2}' 111010001023436350152201001112221112101021213000?????????????????????? Outgroup_to_Amentiferae 0000000000000000000000000000000000000000000000000000000000000000000000 Platycarya 0112000000033363611621022202102202011121100002101141242101001351201211 Pterocarya 0110000100033363541611022202001210011121100122101141242101001351200211 Rhoiptelea 0112000001034363521621001101001102011040100001102141200000000113000210 Ticodendron 1102122333435363520521100101111211031130212033112141200001011212301111 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M2293] TITLE Table_2; LINK TAXA = Taxa1; DIMENSIONS NCHAR=48; FORMAT DATATYPE=Standard SYMBOLS= "0 1 2 3 4 5 6 7 8" MISSING=? GAP= -; CHARSTATELABELS 1 Leaf_organization / pinnate_compound simple., 2 Leaf_arrangement / opposite alternate., 3 Margin / toothed_in_one_order toothed_in_more_than_one_order., 4 'Tooth shape (apical and basal m' / concave_convex convex_convex concave_concave concave_acuminate acuminate_acuminate concave_straight., 5 Sinus_shape / angular smooth., 6 Position_of_principal_vein_of_t / lateral_toward_apical_sinus medial Ticodendron_NA Betulaceae_NA Fagopsis_NA Fagaceae_NA., 7 Course_of_principal_vein_of_too / epically_deflected nothofagoid_principal_displaced Ticodendron_NA Betulaceae_NA Fagopsis_NA Fagaceae_NA., 8 The_presence_of_veins_associate / both_admedial_and_accessory only_admedial only_accessory Ticodendron_NA Betulaceae_NA Fagopsis_NA Fagaceae_NA., 9 Strength_of_admedial_vein_of_to / same_vein_order lower_vein_order Betulaceae_NA Ticodendron_NA Fagopsis_NA Cunoniaceae_NA Fagaceae_NA., 10 Course_of_conjunctal_veins_clos / none single in_alternate_pairs Ticodendron_NA Betulaceae_NA Fagopsis_NA Fagaceae_NA., 11 'Major vein(s) closest to sinus' / admedial accessory_or_branch principal admedial_and_accessory Ticodendron_NA Betulaceae_NA 'nothofagoid: branch from princi' Fagopsis_NA Fagaceae_NA., 12 Position_of_principal_vein_of_t / Cunoniaceae_NA Nothofagus_NA Brunelliaceae_NA medial, 13 Course_of_principal_vein_of_too / Cunoniaceae_NA Brumelliaceae_NA Nothofagus_NA straight epically_deflected basally_deflected., 14 Presence_of_veins_associated_wi / Cunoniaceae_NA Brumelliaceae_NA Nothofagus_NA both_admedial_and_accessory only_accessory., 15 Strength_of_ademedial_vein_of_t / Cumoniaceae_NA Nothofagus_NA Brunelliaceae_NA Betulaceae_NA Fagopsis_NA lower_vein_order same_vein_order., 16 Course_of_conjumctal_veins_of_t / Cunoniaceae_NA Brumelliaceae_NA Nothofagus_NA m_opposite_pairs in_alternate_pairs none., 17 Fusion_of_principal_and_conjumc / Cunoniaceae_NA Nothofagus_NA Fagopsis_NA Brumelliaceae_NA Fagaceae_NA separate fused., 18 Termmation_of_medial_vein_at_ap / splayed attenuate tapered truncated bulbous., 19 Smus_bracing_of_teeth / not_braced braced_by_convergent_thickened, 20 'Major vein(s) closest to sinus' / Cunoniaceae_NA Brunelliaceae_NA Nothofagus__NA acmedial accessory_or_branch conjunctal_or_branch admedial_and_accessory., 21 Glandularity_of_tooth_apex / glandular_dark glandular_translucent nonglandular., 22 Apical_morphology_of_teeth_m_cl / setaceous simple type., 23 Characteristics_of_the_leaf_bas / doesnt_encircle_axis_stipules_d encircles_the_axis_and_forms_sh, 24 Presence_of_wmgs_on_the_petiole / has_stipules has_both_wmgs_and_stipules no_wmgs_or_stipules., 25 Stipules_deciduous_below_the_se / yes_always_deciduous no_not_usually_deciduous Juglandaceae_NA Myricaceae_NA., 26 Petiob_attachment / envhrged_base_without_stipules enlarged_base_with_portion_of_s without_enhrged_base., 27 Petiole_scar / '3(4) trace-3 lacunar' arc_of_more_than_4_traces no_scars_visible., 28 Stipule_base / not_wider_than_attachment wider_than_attachment luglandaceae_NA Myricaceae_NA., 29 Principal_venation / pinnate_semicraspedodromous craspedodromous., 30 Angle_of_origin_of_lower_basal / with_two_pairs_at_a_lower_angle with_basal_no_different_in_angl with_basal_pair_at_a_lower_angl basal_vein_at_highest_angle_wit actinodromous., 31 Areoles / incomplete imperfect well_developed., 32 Margmal_venaion / incomplete_spiked mcompletely_looped looped., 33 Number_of_deuterals / greater_than_18 1ess_than_or_equal_to_18., 34 'Number of deuterals + opadials' / '19-28' 1ess_than_or_equal_to_18 greater_than_28., 35 'Number of deuterals + opadials' / greater_than_60 '41-60' less_than_or_equal_to_40., 36 Trichome_type / simple 'glanduhr-peltate and simple' 'glandular-peltate' 'T-shaped' Cumoniaceae_NA., 37 Stomate_type / paracytic anomocyic variable., 38 Dehision_of_tooth_tip_in_young / nondeciduous deciduous none., 39 Shape_of_tooth_tip_m_young_expa / short_stout elongate_capitate short_capitate elongate_simple Rhoiptelea_NA Myrica_NA., 40 Direction_of_apex_of_tooth_tip / pointing_abaxially pointing_adaxially in__plane_of_lamina., 41 Branching_of_twigs / straight 'slightly zig-zag' 'zig-zag.', 42 Axillary_buds / 'in plane of leaf base(s)' 'out of phne of leaf base(s).', 43 Uniformity_of_course_of_basal_s / no nearly_so yes., 44 Existence_of_comb_vein / present absent., 45 The_existence_of_mtersecondarie / 'common (greater than 40%)' 'few (3 to 5)' 'rare (1 or 2)' 'none (never any).', 46 Branching_of_secondaries / 'rare (1 or 2)' 'few (3 to 5)' 'common (greater than 40%)' 'none (never any).', 47 Base_of_a_number_of_leaves_asym / none common., 48 In_type_1_teeth / principal_vein_originates_from Ticodendron_NA Fagaceae_NA Betulaceae_NA Fagopsis_NA., ; MATRIX [ 10 20 30 40 ] [ . . . . ] Acsmithia 10021100101000000000210000000010020?000000000010 'Alnus {1}' 111100001003335550131210010102211001102221000010 'Alnus {2}' 111103342453343350141210010111211111102221213313 Brunellia 01020000000343635216211001??00220000110010103321 Canacomyrica 111100000103336350161102302302110001125100101100 Castanea 110505566683336342060210100013220001101221003312 Castanopsis 110015566683336352062200100011220001101221202312 Ceratopetalum 000000025020000003000000000002101124100100003300 Cunonia 000000025020000002100010010002020004?13000000000 Davidsonia 011301011003335351162100120113200200011000002200 Fagopsis 11010445457354452214211001?1112?111?????21213304 Myrica 110400001003436460162102300301221001125220201100 'Nothofagus {1}' 110100100061221213022101001100221002111021010300 'Nothofagus {2}' 111010001023436350152201001112221112101021213000 Outgroup_to_Amentiferae 000000000000000000000000000000000000000000000000 Platycarya 011200000003336361162102220210220201112110000210 Pterocarya 011000010003336354161102220200121001112110012210 Rhoiptelea 011200000103436352162100110100110201104010000110 Ticodendron 110212233343536352052110010111121103113021203311 ; END; BEGIN TREES; TITLE Tb4883; LINK TAXA = Taxa1; TRANSLATE 1 'Alnus {2}', 2 'Alnus {1}', 3 'Nothofagus {2}', 4 'Nothofagus {1}', 5 Castanea, 6 Castanopsis, 7 Myrica, 8 Canacomyrica, 9 Rhoiptelea, 10 Platycarya, 11 Pterocarya, 12 Davidsonia, 13 Cunonia, 14 Ceratopetalum, 15 Acsmithia, 16 Brunellia, 17 Fagopsis, 18 Ticodendron, 19 Outgroup_to_Amentiferae; TREE Fig._19 = [&R] (19,((13,14),(15,(((((11,10),12),9),16),('Nothofagus_{1}',(((('Alnus_{2}','Alnus_{1}'),(5,6)),(8,7)),('Nothofagus_{2}',(Fagopsis,18)))))))); END; BEGIN TREES; TITLE Tb4882; LINK TAXA = Taxa1; TRANSLATE 1 'Alnus {2}', 2 'Alnus {1}', 3 'Nothofagus {2}', 4 'Nothofagus {1}', 5 Castanea, 6 Castanopsis, 7 Myrica, 8 Canacomyrica, 9 Rhoiptelea, 10 Platycarya, 11 Pterocarya, 12 Davidsonia, 13 Cunonia, 14 Ceratopetalum, 15 Acsmithia, 16 Brunellia, 17 Fagopsis, 18 Ticodendron, 19 Outgroup_to_Amentiferae; TREE Fig._24 = [&R] (19,(15,((14,(16,(5,12))),(17,(13,(9,((7,(10,11)),(4,2,18)))))))); TREE Fig._23 = [&R] (19,(15,((14,(16,(5,12))),(17,(13,(9,(((10,11),7),((4,2),18)))))))); TREE Fig._20 = [&R] (19,((13,14),(15,(16,((5,12),(9,((7,(11,10)),(4,(2,(17,18)))))))))); TREE Fig._22 = [&R] (19,((13,14),(15,(16,(9,(12,(11,10))),(4,2,5,7,17,18))))); TREE Fig._21 = [&R] (19,((13,14),(15,(16,((9,(12,(11,10))),(4,((2,5),(7,(17,18))))))))); END;