#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 27, 2024; 3:29 GMT TreeBASE (cc) 1994-2008 Study reference: Takahashi T., Sato M., Toyooka K., Matsuzaki R., Kawafune K., Kawamura M., Okuda K., & Nozaki H. 2014. Five Cyanophora (Cyanophorales, Glaucophyta) species delineated based on morphological and molecular data. Journal of Phycology, 50(6): 1058-1069. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S16131] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=6; TAXLABELS Cyanophora_biloba_UTEX_2766 Cyanophora_cuspidata_101 Cyanophora_cuspidata_SAG_45.84 'Cyanophora kugrensii NIES-763' 'Cyanophora paradoxa CCAP 981/1' 'Cyanophora sudae NIES-764' ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M23302] TITLE Cyanophora_ITS; LINK TAXA = Taxa1; DIMENSIONS NCHAR=614; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Cyanophora_biloba_UTEX_2766 ACACTGTATCCAATATACCTTGTGAACTGTTCTGTTCGGGTGCCTGGTTGTCGGCGCTCGCATACCTTTACGGTGTGCTTGCGTCCACAGCCTGGTGCCGTATCACTTTACACCCATTTCATACCTTTGACTGAATCTCTGCTAGTGACGCAAGTCCTGGCAAATCT-AATAAAAAACAACTTTTAACAACGGATATCTTGGTTCTCGCAACGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCAAATCTTTGAACGCATATTGCGCTTCTGGGCTCGCTCAGAAGCATGTCTGTTTCAGTGTCATTATCATCATCCTCACCATACCTTTATGGTCCCTGGTGGACTTGAGTTTCATAGCATTTTCGGATGCTATGTTACTTGAAATATAGAGGTTACTGGGACGGTGGCTGTCCTAAGTGGTGTATTAATCTGCTTCGGCAGAAAATCACCATTTTAGTATGCTGCCCTCGTTGTGCTCAGTTTCCACCTGCTT-GCATTTTTAATTTTGACCTGAAATCAGGCAAGGCCACCCGCTGAACTTAAGCATATTAATAAGCGGAGGAAAAGAAACTAACAAGGATTCC Cyanophora_cuspidata_101 ACACTGTATCCAATATACCTTGTGAACTGTTCTGTTTGGGTGCCAGGTTGTCGGCGCTCGCATACCTTTATGGTGTGCTTGTTTCCGCT-CCTGGTGCCGTATCACTTTCAACCCATTTCATACCTTTGACTGAATCTATGCTAGTGACGCAAGTCCTGGCAA-TCTTAATAAAAAACAACTTTTAACAACGGATATCTTGGCTCTCGCAACGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCAAATCTTTGAACGCATATTGCGCTTCTGGGCTCGCTCAGAAGCATGTCTGTTTCAGTGTCATTATTATCATCCTCATCATACCTTTATGGTC--TGATGGACTTGAGCTTCATAGAATCTTCGGAAGCTATGTTGCTTGAAATTCAGAGGTTACTGGGACGGTAGCTGTCCTAAGTGGTGTATTAATCTGCTTCGGCAGAAAATCACC-TCTTAGTAAGCTGCCCTCGTTGTGCTCAGTTTCCACCTGCTTAGCATCTTTAATTTTGACCTGAAATCAGGCAAGGCCACCCGCTGAACTTAAGCATATTAATAAGCGGAGGAAAAGAAACTAACAAGGATTCC Cyanophora_cuspidata_SAG_45.84 ACACTGTATCCAATATACCTTGTGAACTGTTCTGTTTGGGTGCCAGGTTGTCGGCGCTCGCATACCTTTATGGTGTGCTTGTTTCCGCT-CCTGGTGCCGTATCACTTTCAACCCATTTCATACCTTTGACTGAATCTATGCTAGTGACGCAAGTCCTGGCAA-TCTTAATAAAAAACAACTTTTAACAACGGATATCTTGGCTCTCGCAACGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCAAATCTTTGAACGCATATTGCGCTTCTGGGCTCGCTCAGAAGCATGCCTGTTTCAGTGTCATTATTATCATCCTCATCATACCTTTATGGTC--TGATGGACTTGAGCTTCATAGAATCTTCGGAAGCTATGTTGCTTGAAATTCAGAGGTTACTGGGACGGTAGCTGTCCTAAGTGGTGTATTAATCTGCTTCGGCAGAAAATCACC-TCTTAGTAAGCTGCCCTCGTTGTGCTCAGTTTCCACCTGCTTAGCATCTTTAATTTTGACCTGAAATCAGACAAGGCCACCCGCTGAACTTAAGCATATTAATAAGCGGAGGAAAAGAAACTAACAAGGATTCC 'Cyanophora kugrensii NIES-763' ACACTGTATCCAATATACCTTGTGAACTGTTCTGTTTGGGTGCCAGGTTGTCGGCGCTCGCATACCTTTATGGTATGCTTGTTTCCGCT-CCTGGTGCCGTATCACTTTAAACCCATTTCATACCTTTGACTGAATCTATGCTAGTGACGCAAGTCCTGGCAA-TCTTAATAAAAAACAACTTTTAACAACGGATATCTTGGCTCTCGCAACGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCAAATCTTTGAACGCATATTGCGCTTCTGGGCTCGCTCAGAAGCATGTCTGTTTCAGTGTCATTATTATCATCCTCACCATACCTTTATGGTCCCTGGTGGACTTGAGCTTCATAGAATCTTCGGAAGCTATGTTGCTTGAAATATAGAGGTTACTGGGACGGTAGCTGTCCTAAGTGGTGTATTAATCTGCTTCGGCAGAAAATCACC-TCTTAGTAAGCTGCCCTCGTTGTGCTCAGTTTCCACCTGCTT-GCATTTTTAATTTTGACCTGAAATCAGGCAAGGCCACCCGCTGAACTTAAGCATATTAATAAGCGGAGGAAAAGAAACTAACAAGGATTCC 'Cyanophora paradoxa CCAP 981/1' ACACTGTATCCAATATACCTTGTGAACTGTTCTGTTCGGGTGCCAGGTTGTCGGCGCTCGCATACCTTC-TGGTATGCTTGTTTCCGATGCCTGGTGCCGTATCACTTTAAACCCATTTCATACCTTTGACTGAATCTATGCTAGTGACGCAAGTCCTGGCAA-TCTTAATAAAAAACAACTTTTAACAACGGATATCTTGGCTCTCGCAACGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCAAATCTTTGAACGCATATTGCGCTTCTGGGCTCGCTCAGAAGCATGTCTGTTTCAGTGTCATTATCATCATCCTCACCATACCTTTATGGTCCCTGGTGGACTTGAGCGTCATAGGGTCTTCGGAACCTATGTTGCTTGAAATTCAGAGGTTACTGGGACGGTAGCTGTCCTAAGTGGTGTATTAATCTGCCTCGGCAGAAAATCACC-TCTTAGTAAGCTGCCCTCGTTGTGCTCAGTTTCCACCTGCTT-GCATTTTTAATTTTGACCTGAAATCAGGCAAGGCCACCCGCTGAACTTAAGCATATTAATAAGCGGAGGAAAAGAAACTAACAAGGATTCC 'Cyanophora sudae NIES-764' ACACTGTATCCAATATACCTTGTGAACCGTTCTGTTCGGGTGCCAG-TTGTCGGCGCTCGCATACCTTTATGGTATGCTTGTTTCCGACGACTGGTGCCGTATCACTTCACACCCATTTCATACCTTTGACTGAATCTCTGCTAGTGACGCAAGTCCTGGCAAATCT-AATTAAAAACAACTTTTAACAACGGATATCTTGGCTCTCGCAACGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCAAATCTTTGAACGCATATTGCGCTTCTGGGCTCGCTCAGAAGCATGTCTGTTTCAGTGTCATTATCATCATCCTCACCATACCTTTATGGTCCCTGGTGGACTTGAGCTTCATAGCGTCTTCGGATGCTATGTTGCTTGAAATATAGAGGTTACTGGGACGGTAGCTGTCCTAAGTGGTGTATTAATCTGCTTCGGCAGAAAATCACCATCTTAGTAAGCTGCCCTCGTTGTGCTCAGTTTCCACCTGCTT-GCATTTTTAATTTTGACCTGAAATCAGGCAAGGCCACCCGCTGAACTTAAGCATATTAATAAGCGGAGGAAAAGAAACTAACAAGGATTCC ; END; BEGIN TREES; TITLE Cyanophora_Fig.6; LINK TAXA = Taxa1; TRANSLATE 1 'Cyanophora paradoxa CCAP 981/1', 2 'Cyanophora kugrensii NIES-763', 3 Cyanophora_cuspidata_SAG_45.84, 4 Cyanophora_cuspidata_101, 5 Cyanophora_biloba_UTEX_2766, 6 'Cyanophora sudae NIES-764'; TREE Fig._6 = [&R] ((((4:0.0,3:0.00332992)0.9980:0.01182509,2:0.0)0.5520:0.00590818,1:0.01290008)0.8460:0.00617415,(6:0.00910018,5:0.02591717)0.8460:0.00132017); END;