#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 24, 2024; 9:35 GMT TreeBASE (cc) 1994-2008 Study reference: Jones J.J., Nita M., & Naidu R.A. 2014. Occurence and distribution of Grapevine leafroll associated virus-2, -3 and Grapevine fleck virus and species of mealybugs in Virginia and mid-Atlantic vineyards. European Journal of Plant Pathology, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S16141] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=27; TAXLABELS 'Beet yellows virus NC001598-BYV Outgroup' 'Grapevine leafroll-associated virus 2 AY881628-Unknown-South Africa' 'Grapevine leafroll-associated virus 2 EF123010-Plant de Treffor-Unknown' 'Grapevine leafroll-associated virus 2 EF123011-Chaouch rose-Unknown' 'Grapevine leafroll-associated virus 2 EF123029-Arinto-Unknown' 'Grapevine leafroll-associated virus 2 EU760775-Cabernet Sauvignon-USA' 'Grapevine leafroll-associated virus 2 EU760791-Cabernet Sauvignon-USA' 'Grapevine leafroll-associated virus 2 EU760799-Cabernet Sauvignon-USA' 'Grapevine leafroll-associated virus 2 FJ436234-Unknown-USA' 'Grapevine leafroll-associated virus 2 GU457405-Pinot noir-USA' 'Grapevine leafroll-associated virus 2 HQ162309-Unknown-China' 'Grapevine leafroll-associated virus 2 JQ771955-Pinot noir-USA' 'Grapevine leafroll-associated virus 2 JX559644-Unknown-Canada' 'Grapevine leafroll-associated virus 2 KF417612-Lenoir-USA' 'Grapevine leafroll-associated virus 2 KF417613-Cabernet Sauvignon-USA *' 'Grapevine leafroll-associated virus 2 KF417614-Vidal blanc-USA *' 'Grapevine leafroll-associated virus 2 KF417615-Vidal blanc-USA *' 'Grapevine leafroll-associated virus 2 KF417616-Cabernet Sauvignon-USA *' 'Grapevine leafroll-associated virus 2 KF417617-Seyval blanc-USA *' 'Grapevine leafroll-associated virus 2 KF417618-Traminette-USA *' 'Grapevine leafroll-associated virus 2 KF417619-Cabernet Sauvignon-USA *' 'Grapevine leafroll-associated virus 2 KF417620-Chardonnay-USA *' 'Grapevine leafroll-associated virus 2 KF417621-Sangiovese-USA *' 'Grapevine leafroll-associated virus 2 KF417622-Vidal blanc-USA *' 'Grapevine leafroll-associated virus 2 KF417623-Vidal blanc-USA *' 'Grapevine leafroll-associated virus 2 KF417624-Cabernet Sauvignon-USA *' 'Grapevine leafroll-associated virus 2 KF417625-Vidal blanc-USA *' ; END; BEGIN TAXA; TITLE Taxa2; DIMENSIONS NTAX=134; TAXLABELS 'Grapevine leafroll-associated virus 3 AF037268-isolate NY-1-USA' 'Grapevine leafroll-associated virus 3 AJ748510-Unknown-Austria' 'Grapevine leafroll-associated virus 3 AJ748511-Unknown-Austria' 'Grapevine leafroll-associated virus 3 AJ748512-Unknown-Austria' 'Grapevine leafroll-associated virus 3 AJ748513-Unknown-Austria' 'Grapevine leafroll-associated virus 3 AJ748514-Unknown-China' 'Grapevine leafroll-associated virus 3 AJ748515-Unknown-Syria' 'Grapevine leafroll-associated virus 3 AJ748516-Unknown-Syria' 'Grapevine leafroll-associated virus 3 AJ748517-Unknown-Syria' 'Grapevine leafroll-associated virus 3 AJ748518-Unknown-Italy' 'Grapevine leafroll-associated virus 3 AJ748519-Unknown-Italy' 'Grapevine leafroll-associated virus 3 AJ748520-Unknown-Italy' 'Grapevine leafroll-associated virus 3 AJ748521-Unknown-Italy' 'Grapevine leafroll-associated virus 3 AJ748522-Unknown-Tunisia' 'Grapevine leafroll-associated virus 3 AJ748523-Unknown-USA' 'Grapevine leafroll-associated virus 3 AJ748524-Unknown-Israel' 'Grapevine leafroll-associated virus 3 DQ780885-Unknown-USA' 'Grapevine leafroll-associated virus 3 DQ780886-Unknown-USA' 'Grapevine leafroll-associated virus 3 DQ780887-Unknown-USA' 'Grapevine leafroll-associated virus 3 DQ780888-Unknown-USA' 'Grapevine leafroll-associated virus 3 DQ780889-Unknown-USA' 'Grapevine leafroll-associated virus 3 DQ780890-Unknown-USA' 'Grapevine leafroll-associated virus 3 DQ780891-Unknown-USA' 'Grapevine leafroll-associated virus 3 EU259806-Unknown-South Africa' 'Grapevine leafroll-associated virus 3 EU344893-Merlot-Chile' 'Grapevine leafroll-associated virus 3 FJ195745-Cabernet franc-USA' 'Grapevine leafroll-associated virus 3 FJ195746-Chardonnay-USA' 'Grapevine leafroll-associated virus 3 FJ195747-Riesling-USA' 'Grapevine leafroll-associated virus 3 FJ195748-Merlot-USA' 'Grapevine leafroll-associated virus 3 FJ195749-Cabernet franc-USA' 'Grapevine leafroll-associated virus 3 FJ883760-Lamberger-USA' 'Grapevine leafroll-associated virus 3 FJ883761-Lemberger-USA' 'Grapevine leafroll-associated virus 3 FJ883762-Lemberger-USA' 'Grapevine leafroll-associated virus 3 FJ883763-Chardonnay-USA' 'Grapevine leafroll-associated virus 3 FJ883764-Chardonnay-USA' 'Grapevine leafroll-associated virus 3 FJ883765-Lemberger-USA' 'Grapevine leafroll-associated virus 3 FJ883766-Chardonnay-USA' 'Grapevine leafroll-associated virus 3 FJ883767-Lemberger-USA' 'Grapevine leafroll-associated virus 3 FJ883768-Chardonnay-USA' 'Grapevine leafroll-associated virus 3 FJ883769-GR7-USA' 'Grapevine leafroll-associated virus 3 GQ246623-Zi tao-China' 'Grapevine leafroll-associated virus 3 GQ344807-Cabernet Sauvignon-USA' 'Grapevine leafroll-associated virus 3 GQ344808-Cabernet Sauvignon-USA' 'Grapevine leafroll-associated virus 3 GQ344809-Cabernet Sauvignon-USA' 'Grapevine leafroll-associated virus 3 GQ344810-Chardonnay-USA' 'Grapevine leafroll-associated virus 3 GQ344811-Chardonnay-USA' 'Grapevine leafroll-associated virus 3 GQ344812-Lemberger-USA' 'Grapevine leafroll-associated virus 3 GQ344813-Lemberger-USA' 'Grapevine leafroll-associated virus 3 GQ344814-Lemberger-USA' 'Grapevine leafroll-associated virus 3 GQ344815-Merlot-USA' 'Grapevine leafroll-associated virus 3 GQ344816-Merlot-USA' 'Grapevine leafroll-associated virus 3 GQ344817-Merlot-USA' 'Grapevine leafroll-associated virus 3 GQ344818-Merlot-USA' 'Grapevine leafroll-associated virus 3 GQ344819-Syrah-USA' 'Grapevine leafroll-associated virus 3 GQ344820-Syrah-USA' 'Grapevine leafroll-associated virus 3 GQ344821-Syrah-USA' 'Grapevine leafroll-associated virus 3 GQ344823-Chardonnay-USA' 'Grapevine leafroll-associated virus 3 GQ344824-Chardonnay-USA' 'Grapevine leafroll-associated virus 3 GQ344825-Chardonnay-USA' 'Grapevine leafroll-associated virus 3 GQ344827-Cabernet Sauvignon-USA' 'Grapevine leafroll-associated virus 3 GQ344828-Cabernet Sauvignon-USA' 'Grapevine leafroll-associated virus 3 GQ352631-Cabernet Sauvignon-South Africa' 'Grapevine leafroll-associated virus 3 GQ352632-Ruby Cabernet-South Africa' 'Grapevine leafroll-associated virus 3 GQ478313-Otilia-China' 'Grapevine leafroll-associated virus 3 GU983863-Merlot-USA' 'Grapevine leafroll-associated virus 3 HE794022-Kekfrankos-Hungary' 'Grapevine leafroll-associated virus 3 HE794023-Kakfrankos-Hungary' 'Grapevine leafroll-associated virus 3 HE794024-Keknyelu-Hungary' 'Grapevine leafroll-associated virus 3 HE794025-Olaszrizling-Hungary' 'Grapevine leafroll-associated virus 3 HM059040-Isabel-Brazil' 'Grapevine leafroll-associated virus 3 HM245755-Unknown-Turkey' 'Grapevine leafroll-associated virus 3 HM245756-Unknown-Turkey' 'Grapevine leafroll-associated virus 3 HM636872-Red Globe-Chile' 'Grapevine leafroll-associated virus 3 HM636873-Red Globe-Chile' 'Grapevine leafroll-associated virus 3 HM636874-Flame seedless-Chile' 'Grapevine leafroll-associated virus 3 HM636875-Perlette-Chile' 'Grapevine leafroll-associated virus 3 HM636876-Prime-Chile' 'Grapevine leafroll-associated virus 3 HM636877-Crimson seedless-Chile' 'Grapevine leafroll-associated virus 3 HM636878-Thompson seedless-Chile' 'Grapevine leafroll-associated virus 3 HM636879-Crimson seedless-Chile' 'Grapevine leafroll-associated virus 3 JN859074-Cabernet Sauvignon-India' 'Grapevine leafroll-associated virus 3 JX220899-Pinot noir-New Zealand' 'Grapevine leafroll-associated virus 3 JX220900-Syrah-New Zealand' 'Grapevine leafroll-associated virus 3 JX559645-Unknown-Canada' 'Grapevine leafroll-associated virus 3 KC113195-Concord-USA' 'Grapevine leafroll-associated virus 3 KC113196-Concord-USA' 'Grapevine leafroll-associated virus 3 KC113197-Concord-USA' 'Grapevine leafroll-associated virus 3 KC953908-Mencia-Spain' 'Grapevine leafroll-associated virus 3 KC953909-Unknown-Spain' 'Grapevine leafroll-associated virus 3 KC953910-Tempranillo-Spain' 'Grapevine leafroll-associated virus 3 KC953911-Albarino-Spain' 'Grapevine leafroll-associated virus 3 KC953912-Mencia-Spain' 'Grapevine leafroll-associated virus 3 KC953913-Caino Tinto-Spain' 'Grapevine leafroll-associated virus 3 KC953914-Albarino-Spain' 'Grapevine leafroll-associated virus 3 KC953915-Caino Tinto-Spain' 'Grapevine leafroll-associated virus 3 KC953916-Mencia-Spain' 'Grapevine leafroll-associated virus 3 KC953917-Brancellao-Spain' 'Grapevine leafroll-associated virus 3 KC953918-Tempranillo-Spain' 'Grapevine leafroll-associated virus 3 KC953919-Tempranillo-Spain' 'Grapevine leafroll-associated virus 3 KC953920-Mencia-Spain' 'Grapevine leafroll-associated virus 3 KC953921-Mencia-Spain' 'Grapevine leafroll-associated virus 3 KC953922-Tempranillo-Spain' 'Grapevine leafroll-associated virus 3 KC953923-Mencia-Spain' 'Grapevine leafroll-associated virus 3 KC953924-Retinto-Spain' 'Grapevine leafroll-associated virus 3 KC953925-Tempranillo-Spain' 'Grapevine leafroll-associated virus 3 KC953926-Albarino-Spain' 'Grapevine leafroll-associated virus 3 KC953927-Mencia-Spain' 'Grapevine leafroll-associated virus 3 KC953928-Albarino-Spain' 'Grapevine leafroll-associated virus 3 KC953929-Albarino-Spain' 'Grapevine leafroll-associated virus 3 KC953930-Mencia-Spain' 'Grapevine leafroll-associated virus 3 KC953931-Retinto-Spain' 'Grapevine leafroll-associated virus 3 KC953932-Mencia-Spain' 'Grapevine leafroll-associated virus 3 KC953933-Albarino-Spain' 'Grapevine leafroll-associated virus 3 KC953934-Brancellao-Spain' 'Grapevine leafroll-associated virus 3 KC953935-Brancellao-Spain' 'Grapevine leafroll-associated virus 3 KC953936-Mencia-Spain' 'Grapevine leafroll-associated virus 3 KC953937-Albarino-Spain' 'Grapevine leafroll-associated virus 3 KF029728-Unknown-Poland' 'Grapevine leafroll-associated virus 3 KF029729-Unknown-Poland' 'Grapevine leafroll-associated virus 3 KF029730-Unknown-Poland' 'Grapevine leafroll-associated virus 3 KF029731-Unknown-Poland' 'Grapevine leafroll-associated virus 3 KF029732-Unknown-Poland' 'Grapevine leafroll-associated virus 3 KF417599-Vidal blanc-USA *' 'Grapevine leafroll-associated virus 3 KF417600-Vidal blanc-USA *' 'Grapevine leafroll-associated virus 3 KF417601-Traminette-USA *' 'Grapevine leafroll-associated virus 3 KF417602-Sangiovese-USA *' 'Grapevine leafroll-associated virus 3 KF417603-Cabernet Sauvignon-USA *' 'Grapevine leafroll-associated virus 3 KF417604-Chancellor-USA *' 'Grapevine leafroll-associated virus 3 KF417605-Chardonnay-USA *' 'Grapevine leafroll-associated virus 3 KF417606-Chardonnay-USA *' 'Grapevine leafroll-associated virus 3 KF417607-Rkatsiteli-USA *' 'Grapevine leafroll-associated virus 3 KF417608-Chardonnay-USA *' 'Grapevine leafroll-associated virus 3 KF417609-Syrah-USA *' 'Pineapple mealybug wilt-associated virus 2 EU016675-PMWaV-2 Outgroup' ; END; BEGIN TAXA; TITLE Taxa3; DIMENSIONS NTAX=9; TAXLABELS 'Grapevine fleck virus AJ309022-Unknown-Italy' 'Grapevine fleck virus GU372367-Chardonnay-USA' 'Grapevine fleck virus GU372368-Chardonnay-USA' 'Grapevine fleck virus GU372369-Chardonnay-USA' 'Grapevine fleck virus GU372370-Chardonnay-USA' 'Grapevine fleck virus GU372371-Chardonnay-USA' 'Grapevine fleck virus KF417610-Chancellor-USA *' 'Grapevine fleck virus KF417611-Albarino-USA *' 'Grapevine red globe virus AF521977-GRGV Outgroup' ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M23315] TITLE Grapevine_fleck_virus_Replicase_sequences; LINK TAXA = Taxa3; DIMENSIONS NCHAR=464; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] 'Grapevine fleck virus AJ309022-Unknown-Italy' AACACAATCCAGAAGGATA-CGATCGCCTCCTCCATC--ATTGCCGCCCTCAACCCTTCCCTCACCTCCTCCCTCACCCTCTACCCCTACG-CGCTCCCCCCGCGC----TGGCC-CTCCGCCCTCAACCAAGCCGGCATCCCCGCCA----CTTCCTACGGCCACCAATCCCACCCCCACCCAATCCACAA-GACCATT--GAAACCCATCTCCTCCATGAGCATTGGGCCAACCGTGCGACTCTCCCGTCCACGGTCATG-TTCATGAAGAGGTCGAAGTT---CGACAAGCTCCGC------GTCTCCAACGCGGCTCTCGTCAAATCGGCCTCAAACTTCC--TCCACCTCCTCAACCCCATCCTCACCGCCCGGGACG---CCGACCGGTACACCCAC-CTCCCCCTCCCCGACACCCTCCCCTCCACCCCTCTCTACTTCATG-CATC-ATTCCCTCA 'Grapevine fleck virus GU372367-Chardonnay-USA' AACACCATCCAGAAGGACA-CGATCGCCTCATCCATC--ATCGCCGCCCTTAACCCTTCCCTCACCTCCTCCCTCACCCTCTACCCCTACG-CGCTCCCCTCGCGT----TGGCC-CTCCGCCCTCAACCAAGCTGGCATTCCTGCCA----CTTCCTACGGCCACCAATCCCACCCTCACCCAATCCACAA-GACCATC--GAAACCCATCTCCTTCATGAGCATTGGGCCAACCGTGCGACTCTCCCGTCCACGGTTATG-TTCATGAAGAGGTCGAAGTT---CGACAAGCTCCGT------GTCTCCAACGCGGCGCTCGTCAAATCGGCCTCAAACTTCC--TTCACCTCCTCAACCCCATCCTCACCGCCCGGGACG---CCGACCGGTACACCCAC-CTCCCCCTCCCCGACACCCTCCCCTCCACCCCTCTCTACTTCATG-CATG-ATGCCCTCA 'Grapevine fleck virus GU372368-Chardonnay-USA' AACACCATCCAGAAGGACA-CGATCGCCTCGTCCATC--ATCGCGGCCCTCAACCCATCCCTCACCTCATCCCTCACTCTCTATCCCTACG-CGCTCCCCGCGCGT----TGGCC-CGCAGCCCTCAACCACGCCGGCATCCCCGCCA----CCTCCTATGGCCACCAATCCCACCCCCACCCCATCCATAA-GACCATC--GAAACCCACCTCCTTCACGAACACTGGGCTAACCGTGCCACCCTCCCCTCCACGGTCATG-TTCATGAAGCGATCCAAGTT---TGACAAGCTCCGC------GTCTCCAACGCGGCGCTCGTCAAATCGGCCTCAAACTTCC--TCCACCTCCTCAACCCCATTCTTACCGCTCGCGACG---CCGATCGGTACACCCAC-ATGCCCCTTCCCGAATCCCTTCCCTCCACTCCCCTCTACTTCATG-CATG-ACGCCCTCA 'Grapevine fleck virus GU372369-Chardonnay-USA' AACACCATCCAGAAGGACA-CGATCGCCTCATCCATC--ATCGCCGCCCTTAACCCTTCCCTCACCTCCTCCCTCACCCTCTACCCCTACG-CGCTCCCCTCGCGT----TGGCC-CTCCGCCCTCAACCAAGCTGGCATTCCTGCCA----CTTCCTACGGCCACCAATCCCACCCCCACCCAATCCACAA-GACCATC--GAAACCCATCTCCTTCATGAGCATTGGGCCAACCGTGCGACTCTCCCGTCCACGGTCATG-TTCATGAAGAGGTCGAAGTT---CGACAAGCTCCGT------GTCTCCAACGCGGCGCTCGTCAAATCGGCCTCAAACTTCC--TTCACCTCCTCAACCCCATCCTCACCGCCCGGGACG---CCGACCGGTACACCCAC-CTCCCCCTCCCCGACACCCTCCCCTCCACCCCTCTCTACTTCATG-CATG-ACGCCCTCA 'Grapevine fleck virus GU372370-Chardonnay-USA' AACACCATCCAGAAGGACA-CGATCGCCTCATCCATC--ATCGCCGCCCTTAACCCTTCCCTCACCTCCTCTCTTACCCTCTACCCCTACG-CGCTCCCCTCGCGT----TGGCC-CTCCGCCCTCAACCAAGCTGGCATTCCTGCCA----CTTCCTACGGCCACCAATCCCACCCCCACCCAATCCACAA-GACCATC--GAAACCCATCTCCTTCATGAGCATTGGGCCAACCGTGCGACTCTCCCGTCCACGGTCATG-TTCATGAAGAGGTCGAAGTT---CGACAAGCTCCGT------GTCTCCAACGCGGCGCTCGTCAAATCGGCCTCAAACTTCC--TTCACCTCCTCAACCCCATCCTCACCGCCCGGGACG---CCGACCGGTACACCCAC-CTCCCCCTCCCCGACACCCTCCCCTCCACCCCTCTCTACTTCTTG-CATG-ATGCCCTCA 'Grapevine fleck virus GU372371-Chardonnay-USA' AACACCATCCAGAAGGACA-CGATCGCCTCCTCCATC--ATCGCCGCCCTTAACCCTTCCCTCACCTCCTCCCTCACCCTCTACCCCTACG-CGCTCCCCTCGCGC----TGGCC-CTCCGCCCTCAACCAAGCCGGCATCCCCGCCA----CTTCCTACGGCCACCAATCCCACCCCCACCCCATCCACAA-GACCATC--GAAACCCATCTCCTTCATGAGCATTGGGCCAACCGTGCGACTCTCCCGTCCACGGTCATG-TTCATGAAGAGGTCGAAGTT---CGACAAGCTCCGT------GTCTCCAACGCGGCGCTCGTCAAATCGGTCTCAAACTTCC--TTCACCTCCTCAACCCCATCCTCACCGCCCGGGACG---CCGACCGGTACACCCAC-CTCCCCCTCCCCGACACCCTCCCCTCCACCCCTCTCTACTTCATG-CATG-ATGCCCTCA 'Grapevine fleck virus KF417610-Chancellor-USA *' AACACCATCCAGAAGGACA-CGATCGCCTCCTCCATC--ATAGCCGCTCTCAACCCCTCCCTCACCTCCTCTCTCACCCTCTATCCCTACG-CCCTCCCGGCGCGT----TGGCC-GTCCGCGCTCAACCACGCCGGAATCCCTGCCA----CCTCCTACGGCCACCAATCCCATCCTCACCCCATCCATAA-GACCATT--GAAACCCATCTCCTCCATGAGCACTGGGCTAACCGCGCCACCCTCCCTTCCACCGTCCTG-TTCATGAAGAGGTCGAAGTT---TGACAAGCTCCGG------GTCTCCAACGCGGCGCTCGTCAAATCGGCCTCAAACTTCC--TTCACCTCCTCAACCCCATCCTCACCGCCCGTGACG---CCGACCGTTACACCCAC-ATGCCCCTCCCCGACACCCTCCCGTCAACCCCCCTCTACTTCATG-CATG-ACGCCCTCG 'Grapevine fleck virus KF417611-Albarino-USA *' AAGAGTGTCTGGAAGGACA-CGATCGCGTCTTCCATC--ATCGCCGCCCTTAACCCTTCCCTCACCTCCTCCCTCACCCTCTACCCCTACG-CGCTCCCCTCGCGC----TGGCC-TTCCGCCCTCAACCAAGCCGGCATCCCTGCCA----CTTCCTACGGCCACCAATCCCACCCCCACCCCATCCACAA-GACCATC--GAAACCCATCTCCTTCATGAGCATTGGGCCAACCGCGCGACTCTCCCGTCCACGGTCATG-TTCATGAAGAGGTCGAAGTT---CGACAAGCTCCGT------GTCTCCAACGCGGCGCTCGTCAAATCGGCCTCAAACTTCC--TCCACCTCCTCAACCCCATCCTCACCGCCCGGGACG---CCGACCGGTACACCCAC-CTTCCCCTCCCCGACACCCTCCCTTCCACCCCTCTCTATTTCATG-CATG-ATGCCCTCA 'Grapevine red globe virus AF521977-GRGV Outgroup' TCCATCCCTCAGCCCCTCATCGATCTCCACGTGCATCTGAAGACCAACGTGGACACCCAACTCGGCCCCCTCACCTCCATGCGCCTCACTGGCGAACCAGGAACGTATGATGACAACTCTGATTACAACCTGGCCGTCACTGCAGCCAAATTCATCCTA-GACCCCGAGGTCCACGCCGTTCTCATCTCCGGCGACGATCTTGACATCTCCCCCCCCCCTCCAGTCCGCCCCACCTGGCCCATTCTCGAAGCCATGCTCTCACTTCGCTTCAAGACTGAAGTCTCCCGCTACGGTCTTTTCTGCGGTTACTATCTTGGCCCCGCTGGAGCCGTCCGCTCACCTCTGGCCCTCTTTGCCAAGCTCATCATCGCCGTCGACGACGGTTCCATCGAGGACAAGAAAGCTTCATATCTCTCAGAATTTGCTGTCGGCCACTCCCTCGGTCAGGACATGTGGACTCTC- ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M23316] TITLE 'Grapevine leafroll-associated virus 2 HSP70h sequences'; LINK TAXA = Taxa1; DIMENSIONS NCHAR=334; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] 'Beet yellows virus NC001598-BYV Outgroup' GAGAGATAGTGCTTACATACCTACTTACGTATTTTTACATTCTGATACTCAAGAAGTGGCTTTCGGATACGACGCCGAGGTTCTTTCTAACGATCTTTCAGTTCGTGGAGGTTTCTATCGCGACTTAAAACGCTGGATAGGATGCGACGAAGAAAACTATAGAGACTACCTGGAAAAACTTAAGCCGCACTACAAGACAGAGCTGCTTAAGGTTGCTCAAAGTTCGAAGTCCACTGTGAAATTGGACTGTTACTCTGGTACCGTGCCACAGAATGCCACTTTACCAGGTTTGATAGCGACTTTCGTCAAAGCTCTGATTTCCACAGCCAGCGAA 'Grapevine leafroll-associated virus 2 AY881628-Unknown-South Africa' --ATAATTCGGCGTACATCCCAACTTACCTCTATCTCTTTTCCGATTCTAACCACATGACGTTTGGTTACGAGGCTGAATCGTTGATGAGTAACTTGAAAGTTAGGGGTTCGTTTTATAGAGATTTGAAACGTTGGGTGGGTTGCGATTCGAGTAACCTCGACGAATACCTCGATCGTTTAAAACCTCACTACTCGGTACGCTTGATTAAGATTGGTTCTGGTTTGAACGAAACCGTTTCTATTGGAAGCTTCGGGGGCACTGTCAGATCTGAAGTTCATCTACCGGGGTTGATAGCCCTTTTTATCAAGGCTATCGTTGGCTGTGCCGAGAAC 'Grapevine leafroll-associated virus 2 EF123010-Plant de Treffor-Unknown' --ACAATTCGGCATACATCCCTACTTATCTTTATCTCTTCTCTGATTCTAACCACATGACTTTCGGTTACGAGGCTGAGTCGTTGATGAGTAATGAGAAGGTCAAAGGTTCGTTTTATAGAGACTTGAAACGTTGGGTGGGTTGCGATTCGAGTAATCTCGACGAATATCTTAATCGTTTAAAACCACACTACTCAGTCCGCTTGATTAAGATCGGTTCTGGTTTGAACGAAACTGTCTCGATTGGAAATTTCGGTGGTACGGTCAGGTCTGAGTGTCATCTACCGGGGTTAATAGCTTCCTTCATCAAGGCCGTCATCAGTTGTGCGGAGGGT 'Grapevine leafroll-associated virus 2 EF123011-Chaouch rose-Unknown' --ATAATTCGGCGTACATCCCCACTTACCTCTATCTCTTCTCCGATTCTAACCACATGACTTTTGGTTACGAGGCCGAATCACTGATGAGTAATCTGAAAGTTAAAGGTTCGTTTTATAGAGATTTAAAACGTTGGGTGGGTTGCGATTCGAGTAACCTCGACGCGTACCTTGACCGTTTAAAACCTCATTACTCGGTCCGCTTGGTTAAGATCGGCTCTGGCTTGAACGAAACTGTTTCAATTGGAAACTTCGGGGGCACTGTTAAGTCTGAGGCTCATCTGCCAGGGTTGATAGCTCTCTTTATTAAGGCTGTCATTAGTTGCGCGGAGGGC 'Grapevine leafroll-associated virus 2 EF123029-Arinto-Unknown' --ATAATTCGGCGTACATCCCTACTTATCTCTATCTCTTCTCCGATTCTAACCACATGACTTTTGGTTATGAGGCCGAATCACTGATGAGTAATTTGAAAGTTAAAGGTTCGTTTTATAGAGATTTAAAACGTTGGGTGGGTTGCGATTCGAGTAACCTCGACGCGTACCTTGACCGTTCAAAACCTCATTACTCGGTCCGCTTGGCTAAGATCGGCTCTGGCTTGAACGAAACTGTTTCAATTGGAAATTTCGGGGGCACTGTTAAGTCTGAGGCTCATCTGCCGGGGTTGATAGCTCTCTTTATTAAGGCTATCATTAGTTGCGCGGAGGGC 'Grapevine leafroll-associated virus 2 EU760775-Cabernet Sauvignon-USA' ----AATTCGGCGTACATCCCCACTTACCTCTATCTCTTCTCCGATTCTAACCACATGACTTTTGGTTACGAGGCCGAATCACTGATGAGTAATCTGAAAGTTAAAGGTTCGTTTTATAGAGATTTAAAACGTTGGGTGGGTTGCGATTCGAGTAACCTCGACGCGTACCTTGACCGTTTAAAACCTCATTACTCGGTCCGCTTGGTTAAGATCGGCTCTGGCTTGAACGAAACTGTTTCAATTGGAAACTTCGGGGGCACTGTTAAGTCTGAGGCTCATCTGCCAGGGTTGATAGCTCTCTTTATTAAGGCTGTCATTAGTTGCGCGGAGGGC 'Grapevine leafroll-associated virus 2 EU760791-Cabernet Sauvignon-USA' --ATAATTCGGCGTACATCCCCACTTACCTTTATCTTTTCTCCGATTCTAACCACATGACTTTTGGTTATGAGGCTGAGTCGTTGATGGGTAATGAGAAGGTCAAAGGTTCTTTTTTCAGAGACTTGAAACGTTGGGTGGGTTGTGATTCGAGTAATTTAGACGAATATCTCGATCGTTTAAAACCACACTATTCAGTCCGCTTGATTAAGATCGGTTCTGGTTTGAACGATACCGTTTCGATTGGAAATTTCGGGGGCACGGTCAAGTCTGAGTGTCATCTACCGGGGTTGATAGCTTCTTTCATCAAGGCTGTCATTAGTTGCGCGGAGGGC 'Grapevine leafroll-associated virus 2 EU760799-Cabernet Sauvignon-USA' --ATAATTCGGCGTACATCCCCACTTACCTTTATCTTTTCTCCGATTCTAACCACATGACTTTTGGTTATGAGGCTGAGTCGTTGATGGGTAATGAGAAGGTCAAAGGTTCTTTTTTCAGAGACTTGGAACGTTGGGTGGGTTGTGATTCGAGTAATTTAGACGAATATCTCGATCGTTTAAAACCACACTATTCAGTCCGCTTGACTAAGATCGGTTCTGGTTTGAACGATACCGTTTCGATTGGAAATTTCGGGGGCACGGTCAAGTCTGAGTGTCATCTACCGGGGTTGATAGCTTCTTTCATCAAGGCTGTCATTAGTTGCGCGGAGGGC 'Grapevine leafroll-associated virus 2 FJ436234-Unknown-USA' --ATAATTCGGCGTACATCCCCACTTACCTCTATCTCTTCTCCGATTCTAACCACATGACTTTTGGTTACGAGGCCGAATCACTGATGAGTAATCTGAAAGTTAAAGGTTCGTTTTATAGAGATTTAAAACGTTGGGTGGGTTGCGATTCGAGTAACCTCGACGCGTACCTTGACCGTTTAAAACCTCATTACTCGGTCCGCTTGGTTAAGATCGGCTCTGGCTTGAACGAAACTGTTTCAATTGGAAACTTTGGGGGCACTGTTAAGTCTGAGGCTCATCTGCCAGGGTTGATAGCTCTCTTTATTAAGGCTGTCATTAGTTGCGCGGAGGGC 'Grapevine leafroll-associated virus 2 GU457405-Pinot noir-USA' --ATAATTCGGCGTACATCCCCACTTACCTCTATCTCTTCTCCGATTCTAACCACATGACTTTTGGTTACGAGGCCGAATCACTGATGAGTAATCTGAAAGTTAAAGGTTCGTTTTATAGAGATTTAAAACGTTGGGTGGGTTGCGATTCGAGTAACCTCGACGCGTACCTTGACCGTTTAAAACCTCATTACTCGGTCCGCTTGGTTAAGATCGGCTCTGGCTTGAACGAAACTGTTTCAATTGGAAACTTCGGGGGCACTGTTAAGTCTGAGGCTCATCTGCCAGGGTTGATAGCTCTCTTTATTAAGGCTGTCATTAGTTGCGCGGAGGGC 'Grapevine leafroll-associated virus 2 HQ162309-Unknown-China' --ATAATTCGGCGTACATCCCCACTTACCTCTATCTCTTCTCCGATTCTAACCACATGACTTTTGGTTACGAGGCCGAATCACTGATGAGTAATCTGAAAGTTAAAGGTTCGTTTTATAGAGATTTAAAACGTTGGGTGGGCTGCGATTCGAGTAACCTCGACGCGTACCTTGACCGTTTAAAACCTCATTACCCGGTCCGCTTGGTTAAGATCGGCTCTGGCTTGAACGAAACTGTTTCAATTGGAAACTTCGGGGGCACTGTTAAGTCTGAGGCTCATCTGCCAGGGTTGATAGCTCTCTTTATTAAGGCTGTCATTAGTTGCGCGGAGGGC 'Grapevine leafroll-associated virus 2 JQ771955-Pinot noir-USA' --ATAATTCGGCGTACATCCCCACTTACCTCTATCTCTTCTCCGATTCTAACCACATGACTTTTGGTTACGAGGCCGAATCACTGATGAGTAATCTGAAAGTTAAAGGTTCGTTTTATAGAGATTTAAAACGTTGGGTGGGTTGCGATTCGAGTAACCTCGACGCGTACCTTGACCGTTTAAAACCTCATTACTCGGTCCGCTTGGTTAAGATCGGCTCTGGCTTGAACGAAACTGTTTCAATTGGAAACTTCGGGGGCACTGTTAAGTCTGAGGCTCATCTGCCAGGGTTGATAGCTCTCTTTATTAAGGCTGTCATTAGTTGCGCGGAGGGC 'Grapevine leafroll-associated virus 2 JX559644-Unknown-Canada' --ATAATTCGGCGTACATCCCCACTTACCTCTATCTCTTCTCCGATTCTAACCACATGACTTTTGGTTACGAGGCCGAATCACTGATGAGTAATCTGAAAGTTAAAGGTTCGTTTTATAGAGATTTAAAACGTTGGGTGGGTTGCGATTCGAGTAACCTCGACGCGTACCTTGACCGTTTAAAACCTCATTACTCGGTCCGCTTGGTTAAGATCGGCTCTGGCTTGAACGAAACTGTTTCAATTGGAAACTTCGGGGGCACTGTTAAGTCTGAGGCTCATCTGCCAGGGTTGATAGCTCTCTTTATTAAGGCTGTCATTAGTTGCGCGGAGGGC 'Grapevine leafroll-associated virus 2 KF417612-Lenoir-USA' --ATAATTCGGCGTACATCCCCACTTACCTCTATCTCTTCTCCGATTCTAACCACATGACTTTTGGTTACGAGGCCGAATCACTGATGAGTAATCTGAAAGTTAAAGGTTCGTTTTATAGAGATTTAAAACGTTGGGTGGGTTGCGATTCGAGTAACCTCGACGCGTACCTTGACCGTTTAAAACCTCATTACTCGGTCCGCTTGGTTAAGATCGGCTCTGGCTTGAACGAAACTGTTTCAATTGGAAACTTCGGGGGCACTGTTAAGTCTGAGGCTCATCTGCCAGGGTTGATAGCTCTCTTTATTAAGGCTGTCATTAGTTGCGCGGAGGGC 'Grapevine leafroll-associated virus 2 KF417613-Cabernet Sauvignon-USA *' --ATAATTCGGCGTACATCCCCACTTACCTCTATCTCTTCTCCGATTCTAACCACATGACTTTTGGTTACGAGGCCGAATCACTGATGAGTAATCTGAAAGTTAAAGGTTCGTTTTATAGAGATTTAAAACGTTGGGTGGGTTGCGATTCGAGTAACCTCGACGCGTACCTTGACCGTTTAAAACCTCATTACTCGGTCCGCTTGGTTAAGATCGGCTCTGGCTTGAACGAAACTGTTTCAATTGGAAACTTCGGGGGCACTGTTAAGTCTGAGGCTCATCTGCCAGGGTTGATAGCTCTCTTTATTAAGGCTGTCATTAGTTGCGCGGAGGGC 'Grapevine leafroll-associated virus 2 KF417614-Vidal blanc-USA *' --ATAATTCGGCGTACATCCCCACTTATCTCTATCTCTTCTCCGATTCTAACCACATGACTTTTGGTTATGAGGCTGAATCATTGATGAGTAATGTGAAGGTCAAAGGTTCGTTTTTTAGAGACTTGAAGCGTTGGGTGGGTTGCGATTCGAGTAATTTTGACGAATATCTCGATCGTTTAAAACCACACTACTCAGTCCGCTTGGTTAAGATCGGTTCAGGTTTGAACGACACCGTTTCAATTGGAAATTTCGGAGGCACGGTCAGGTCTGAGTTCCATCTACCAGGGTTGATAGCTTCATTCATCAAGGCTGTCATTAGTTGCGCGGAGGGC 'Grapevine leafroll-associated virus 2 KF417615-Vidal blanc-USA *' --ATAATTCGGCGTACATCCCCACTTACCTCTATCTCTTCTCCGATTCTAACCACATGACTTTTGGTTACGAGGCCGAATCACTGATGAGTAATCTGAAAGTTAAAGGTTCGTTTTATAGAGATTTAAAACGTTGGGTGGGTTGCGATTCGAGTAACCTCGACGCGTACCTTGACCGTTTAAAACCTCATTACCCGGTCCGCTTGGTTAAGATCGGCTCTGGCTTGAACGAAACTGTTTCAATTGGAAACTTCGGGGGCACTGTTAAGTCTGAGGCTCATCTGCCAGGGTTGATAGCTCTCTTTATTAAGGCTGTCATTAGTTGCGCGGAGGGC 'Grapevine leafroll-associated virus 2 KF417616-Cabernet Sauvignon-USA *' --ATAATTCGGCGTACATCCCCACTTACCTCTATCTCTTCTCCGATTCTAACCACATGACTTTTGGTTACGAGGCCGAATCACTGATGAGTAATCTGAAAGTTAAAGGTTCGTTTTATAGAGATTTAAAACGTTGGGTGGGTTGCGATTCGAGTAACCTCGACGCGTACCTTGACCGTTTAAAACCTCATTACTCGGTCCGCTTGGTTAAGATCGGCTCTGGCTTGAACGAAACTGTTTCAATTGGAAACTTCGGGGGCACTGTTAAGTCTGAGGCTCATCTGCCAGGGTTGATAGCTCTCTTTATTAAGGCTGTCATTAGTTGCGCGGAGGGC 'Grapevine leafroll-associated virus 2 KF417617-Seyval blanc-USA *' --ATAATTCGGCGTACATCCCCACTTACCTCTATCTCTTCTCCGATTCTAACCACATGACTTTTGGTTACGAGGCCGAATCACTGATGAGTAATCTGAAAGTTAAAGGTTCGTTTTATAGAGATTTAAAACGTTGGGTGGGTTGCGATTCGAGTAACCTCGACGCGTACCTTGACCGTTTAAAACCTCATTACTCGGTCCGCTTGGTTAAGATCGGCTCTGGCTTGAACGAAACCGTTTCAATTGGAAACTTCGGGGGCACTGTTAAGTCTGAGGCTCATCTGCCAGGGTTGATAGCTCTCTTTATTAAGGCTGTCATTAGTTGCGCGGAG--- 'Grapevine leafroll-associated virus 2 KF417618-Traminette-USA *' --ATAATTCGGCGTACATCCCCACTTATCTCTATCTCTTCTCCGATTCTAACCACATGACTTTTGGTTATGAGGCTGAATCATTGATGAGTAATGTGAAGGTCAAAGGTTCGTTTTTTAGAGACTTGAAGCGTTGGGTGGGTTGCGATTCGAGTAATTTTGACGAATATCTCGATCGTTTAAAACCACACTACTCAGTCCGCTTGGTTAAGATCGGTTCAGGTTTGAACGAAACCGTTTCAATTGGAAATTTCGGAGGCACGGTCAGGTCTGAGTTCCATCTACCAGGGTTGATAGCTTCATTCATCAAGGCTGTCATTAGTTGCGCGGAGGGC 'Grapevine leafroll-associated virus 2 KF417619-Cabernet Sauvignon-USA *' --ATAATTCGGCGTACATCCCCACTTATCTCTATCTCTTCTCCGATTCTAACCACATGACTTTTGGTTATGAGGCTGAATCATTGATGAGTAATGTGAAGGTCAAAGGTTCGTTTTTTAGAGACTTGAAGCGTTGGGTGGGTTGCGATTCGAGTAATTTTGACGAATATCTCGATCGTTTAAAACCACACTACTCAGTCCGCTTGGTTAAGATCGGTTCAGGTTTGAACGATACCGTTTCAATTGGAAATTTCGGAGGCACGGTCAGGTCTGAGTTCCATCTACCAGGGTTGATAGCTTCATTCATCAAGGCTGTCATTAGTTGCGCGGAGGGC 'Grapevine leafroll-associated virus 2 KF417620-Chardonnay-USA *' --ATAATTCGGCGTACATCCCCACTTACCTCTATCTCTTCTCCGATTCTAACCACATGACTTTTGGTTACGAGGCCGAATCACTGATGAGTAATCTGAAAGTTAAAGGTTCGTTTTATAGAGATTTAAAACGTTGGGTGGGTTGCGATTCGAGTAACCTCGACGCGTACCTTGACCGTTTAAAACCTCATTACTCGGTCCGCTTGGTTAAGATCGGCTCTGGCTTGAACG{AG}AACTGTTTCAATTGGAAACTTCGGGGGCACTGTTAAGTCTGAGGCTCATCTGCCAGGGTTGATAGCTCTCTTTATTAAGGCTGTCATTAGTTGCGCGGAGGGC 'Grapevine leafroll-associated virus 2 KF417621-Sangiovese-USA *' ---------------------------------------------------------------------------TGAATCATTGATGAGTAATGTGAAGGTCAAAGGTTCGTTTTTTAGAGACTTGAAGCGTTGGGTGGGTTGCGATTCGAGTAATTTTGACGAATATCTCGATCGTTTAAAACCACACTACTCAGTCCGCTTGGTTAAGATCGGTTCAGGTTTGAACGAAACCGTTTCAATTGGAAATTTCGGAGGCACGGTCAGGTCTGAGTTCCATCTACCAGGGTTGATAGCTTCATTCATCAAGGCTGTCATTAGTTGCGCGGAGGGC 'Grapevine leafroll-associated virus 2 KF417622-Vidal blanc-USA *' --ATAATTCGGCGTACATCCCCACTTACCTCTATCTCTTCTCCGATTCTAACCACATGACTTTTGGTTACGAGGCCGAATCACTGATGAGTAATCTGAAAGTTAAAGGTTCGTTTTATAGAGATTTAAAACGTTGGGTGGGTTGCGATTCGAGTAACCTCGACGCGTACCTTGACCGTTTAAAACCTCATTACCCGGTCCGCTTGGTTAAGATCGGCTCTGGCTTGAACGAAACTGTTTCAATTGGAAACTTCGGGGGCACTGTTAAGTCTGAGGCTCATCTGCCAGGGTTGATAGCTCTCTTTATTAAGGCTGTCATTAGTTGCGCG------ 'Grapevine leafroll-associated virus 2 KF417623-Vidal blanc-USA *' --ATAATTCGGCGTACATCCCCACTTACCTCTATCTCTTCTCCGATTCTAACCACATGACTTTTGGTTACGAGGCCGAATCACTGATGAGTAATCTGAAAGTTAAAGGTTCGTTTTATAGAGATTTAAAACGTTGGGTGGGTTGCGATTCGAGTAACCTCGACGCGTACCTTGACCGTTTAAAACCTCATTACCCGGTCCGCTTGGTTAAGATCGGCTCTGGCTTGAACGAAACTGTTTCAATTGGAAACTTCGGGGGCACTGTTAAGTCTGAGGCTCATCTGCCAGGGTTGATAGCTCTCTTTATTAAGGCTGTCATTAGTTGCGCGGAGGGC 'Grapevine leafroll-associated virus 2 KF417624-Cabernet Sauvignon-USA *' --ATAATTCGGCGTACATCCCCACTTACCTCTATCTCTTCTCCGATTCTAACCACATGACTTTTGGTTACGAGGCCGAATCACTGATGAGTAATCTGAAAGTTAAAGGTTCGTTTTATAGAGATTTAAAACGTTGGGTGGGTTGCGATTCGAGTAACCTCGACGCGTACCTTGACCGTTTAAAACCTCATTACCCGGTCCGCTTGGTTAAGATCGGTTCTGGCTTGAACGAAACTGTTTCAATTGGAAACTTCGGGGGCACTGTTAAGTCTGAGGCTCATCTGCCAGGGTTGATAGCTCTCTTTATTAAGGCTGTCATTAGTTGCGCGGAGGGC 'Grapevine leafroll-associated virus 2 KF417625-Vidal blanc-USA *' --ATAATTCGGCGTACATCCCCACTTACCTCTATCTCTTCTCCGATTCTAACCACATGACTTTTGGTTACGAGGCCGAATCACTGATGAGTAATCTGAAAGTTAAAGGTTCGTTTTATAGAGATTTAAAACGTTGGGTGGGTTGCGATTCGAGTAACCTCGACGCGTACCTTGACCGTTTAAAACCTCATTACCCGGTCCGCTTGGTTAAGATCGGCTCTGGCTTGAACGAAACTGTTTCAATTGGAAACTTCGGGGGCACTGTTAAGTCTGAGGCTCATCTGCCAGGGTTGATAGCTCTCTTTATTAAGGCTGTCATTAGTTGCGCGGAGGGC ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M23317] TITLE 'Grapevine leafroll-associated virus 3 HSP70h sequences'; LINK TAXA = Taxa2; DIMENSIONS NCHAR=484; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] 'Grapevine leafroll-associated virus 3 AF037268-isolate NY-1-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCCGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAAGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATACTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGGTCTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAGCCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 AJ748510-Unknown-Austria' -AACTGGTC--TTGACAACTTTTATCCAGACC-CTGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCCAATTTGCCGCAGATATC--TAAGGTTGTGT--TCGACAATACTGATTTTAGGTGTTCGGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGACTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTAGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 AJ748511-Unknown-Austria' -AACCGGTC--TTGACAACTTTTATCCAGACC-CTGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 AJ748512-Unknown-Austria' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 AJ748513-Unknown-Austria' -AACTGGTC--TTGACAACTTTTATCCAGACC-CTGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCCAATTTGCCGCAGATATC--TAAGGTTGTGT--TCGACAATACTGATTTTAGGTGTTCGGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGACTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTAGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAAAAGAGACCGACGTAGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 AJ748514-Unknown-China' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 AJ748515-Unknown-Syria' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 AJ748516-Unknown-Syria' -AACCGGTC--TTGACAACTTTTATCCAGACC-CCGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAATGACGTGGCCAATTTGCCGCAGATATC--TAAAGTTGTGT--TCGACAATACTGATTTTAGGTGTTCGGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGACTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTAGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAAAAGAGACCGACGTAGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 AJ748517-Unknown-Syria' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTCTCAGCCGGTGGTAATTTTCCCGAAA--GATAGTCCAATAC-CCCGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 AJ748518-Unknown-Italy' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 AJ748519-Unknown-Italy' -GACTGGTC--TCGATAACTTTTATCCAGACC-CGGTTATTGCCGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGAAGTGATGTGGCTAATTTGCCGCAGATATC--TAAAGTTGTGT--TCGATAGTGCCGATTTTAGATGTTCAGT-GGCCTGTG-GAGCTAAGGTTTACTGCGACATTTTGGCGG-GTAATAGTGG--ACTGAGACTGGTGGACACT--TTAACGAACACGC--TAACGGACGAAGTGACGGATTTTCAACCGGTGGTGATTTTCCCGAAA--GGCAGTCCAATAC-CCTGCTCATACAC-TCATAGGTAC-ACGGTGAGCGGTGATGAAGTGGT--ATATGGT-ATATTTGAAG-----GGGAGAATAATAG--------AGCTTTTCTAAATGAACCGACATTCCGGGGCGTATCGAAACGTAGGGGAG-AACCAAAAGAAAGCGATGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 AJ748520-Unknown-Italy' -GACTGGTC--TCGATAACTTTTATCCAGACC-CGGTTATTGCCGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGAAGTGATGTGGCTAATTTGCCGCAGATATC--TAAAGTTGTGT--TCGATAGTGCCGATTTTAGATGTTCAGT-GGCCTGTG-GAGCTAAGGTTTACTGCGACATTTTGGCGG-GTAATAGTGG--ACTGAGACTGGTGGACACT--TTAACGAACACGC--TAACGGACGAAGTGACGGATTTTCAACCGGTGGTGAATTTCCCGAAA--GGCAGTCCAATAC-CCTGCTCATACAC-TCATAGGTAC-ACGGTGAGCGGTGATGAAGTGGT--ATATGGT-ATATTTGAAG-----GGGAGAATAATAG--------AGCTTTTCTAAATGAACCGACATTCCGGGGCGTATCGAAACGTAGGGGAG-AACCAAAAGAAAGCGATGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 AJ748521-Unknown-Italy' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 AJ748522-Unknown-Tunisia' -AACCGGTC--TTGACAACTTTTATCCAGACC-CGGTTATCGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGCGATGTGGCCAGTTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-AGCCTGTG-GAGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGATTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTAGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCATAGATAC-ACAGTGGGTAGTGGGAATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGAGGAG-ACCCAGTAGAGACTGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 AJ748523-Unknown-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCTGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 AJ748524-Unknown-Israel' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 DQ780885-Unknown-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTTAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCGGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 DQ780886-Unknown-USA' -AACTGGTC--TCGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGATGAGGTGGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 DQ780887-Unknown-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAATACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 DQ780888-Unknown-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGGTATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 DQ780889-Unknown-USA' -GACCGGTC--TTGACAACTTTTATCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCGAGTGCTCTAGCTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-AGCCTGTG-GAGCTAAGGTTTACTGTGATATTTTGGCTG-GCAATAGTGG--GCTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTGATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAT-ACAGTGGGTGGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTGTCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCACAGTTTAAT 'Grapevine leafroll-associated virus 3 DQ780890-Unknown-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 DQ780891-Unknown-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAATTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCGTATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 EU259806-Unknown-South Africa' ---------AGCTGGTAGTGTTTACGTTGA----AACCCAAATTTTCGTACCTGTAGGTAGCAGTACT-TATTTAATTGGTAAAGCAGCGGGGAAAGCTTATCGCGACGGTG--TAGAGGGAAGG--TTGT--ATGTTAACCCGAAAAGGTGGGTAGGTGTGAC-GAGGGATAACGTCGAACGTTACGTTGAGAA-ATTAAAACCT--ACATACACCGTAAAGATAG--ACAGCGGAGGCGCCTTATTAATCGGAGGTTTAGGTTCCGGACCGGACACCTTATTGAGGGTC--GTTGACGTGATATGTTTATTCTTGAGA-GCCTTGATACTGGAGTGCGAAAGGTATACGTCTA--CTACGGTTACAGCTGCAGTT---GTAACGGTACCGGCTGATTATAACTCCTTTAAACGAAGCTTCGTTGTTGAG-GTACTGAAAGGTCTTGGTA-TACCGGTTAGAGGTGTTGTTA-ACGAACCGAC 'Grapevine leafroll-associated virus 3 EU344893-Merlot-Chile' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCACATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAACAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGATTAAT 'Grapevine leafroll-associated virus 3 FJ195745-Cabernet franc-USA' -AACTGGTC--TTGACAACTTTTACCCCGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCCACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 FJ195746-Chardonnay-USA' -AACTGGTC--TTGACAACTTTTACCCCGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCAAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 FJ195747-Riesling-USA' -AACCGGTC--TTGACAACTTTTATCCAGACC-CTGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCCAATTTGCCGCAGATATC--TAAGGTTGTGT--TCGACAATACTGATTTTAGGTGTTCGGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGACTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTAGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAAAAGAGACCGACGTAGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 FJ195748-Merlot-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CTGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCCAATTTGCCGCAGATATC--TAAGGTTGTGT--TCGACAATACTGATTTTAGGTGTTCGGT-{AG}GCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGATTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTAGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAAAAGAGACCGACGTGGCCCAATTTAAT 'Grapevine leafroll-associated virus 3 FJ195749-Cabernet franc-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCCGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGAAGTGATGTGGCTAATTTGCCGCAGATATC--TAAAGTTGTGT--TTGACAGTGCCGATTTTAGATGTTCAGT-GGCCTGTG-GAGCTAAGGTTTACTGCGACATTTTGGCGG-GTAATAGTGG--ACTGAGACTGGTGGACACT--TTAACGAACACGC--TAACGGACGAAGTGACGGATTTTCAACCGGTGGTGATTTTCCCGAAA--GGCAGTCCAATAC-CCTGCTCATACAC-TCATAGGTAC-ACGGTGAGCGGTGATGAAGTGGT--ATATGGT-ATATTTGAAG-----GGGAGAATAATAG--------AGCTTTTCTAAATGAACCGACATTCCGGGGCGTATCGAAACGTAGGGGAG-AACCAAAAGAAAGCGATGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 FJ883760-Lamberger-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 FJ883761-Lemberger-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCCGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAAATTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 FJ883762-Lemberger-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCA?AGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 FJ883763-Chardonnay-USA' -AACCGGTC--TTGATAACTTTTATCCAGACC-CTGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGACGTGGCCAATTTGCCGCAGATATC--TAAGGTTGTGT--TCGATAATACTGATTTTAGGTGTTCGGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGACTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTGGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAAAAGAGACCGACGTAGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 FJ883764-Chardonnay-USA' -AACCGGTC--TTGACAACTTTTATCCAGACC-CTGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGACGTGGCCAATTTGCCGCAGATATC--TAAGGTTGTGT--TCGACAATACTGATTTTAGGTGTTCGGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGACTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTGGTGGAGATGTGGT--TTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAAAAGAGACCGACGTAGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 FJ883765-Lemberger-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCCAATTTGCCGCAGATATC--TAAGGTTGTGT--TCGACAATACTGATTTTAGGTGTTCGGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGACTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTAGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 FJ883766-Chardonnay-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCCGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAAGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATACTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGGTCTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTAGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACACAAAAGAGACCGACGTAGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 FJ883767-Lemberger-USA' -AACCGGTC--TTGACAACTTTTATCCAGACC-CTGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCCAATTTGCCGCAGATATC--TAAGGTTGTGT--TCGACAATACTGATTTTAGGTGTTCGGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGACTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTAGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAATCGTAGGGGAG-ACACAAAAGAGACCGACGTAGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 FJ883768-Chardonnay-USA' -AACCGGTC--TTGACAACTTTTATCCAGACC-CTGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCCAATTTGCCGCAGATATC--TAAGGTTGTGT--TCGACAATACTGATTTTAGGTGTTCGGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGACTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTAGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACACAAAAGAGACCGACGTAGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 FJ883769-GR7-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CTGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCCAATTTGCCGCAGATATC--TAAGGTTGTGT--TCGACAATACTGATTTTAGGTGTTCGGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGACTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTAGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAAAAGAGTCCGACGTAGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 GQ246623-Zi tao-China' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAAATAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 GQ344807-Cabernet Sauvignon-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 GQ344808-Cabernet Sauvignon-USA' -AACCGGTC--TTGACAACTTTTATCCAGACC-CGGTTATCGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGCGATGTGGCCAGTTTGCCGCAGATATC--TAAGGTCGTGT--TCGGCAGTACCGATTTTAGATGTTCGGT-AGCCTGTG-GAGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGATTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTAGATTTTCAGCCGGTGGTAATTTTTCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCATAGATAC-ACAGTGGGTAGTGGGGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACTGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 GQ344809-Cabernet Sauvignon-USA' -AACCGGTC--TTGACAACTTTTATCCAGACC-CGGTTATCGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGCGATGTGGCCAGTTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-AGCCTGTG-GAGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGATTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTAGATTTTCAGCCGGTGGTAATTTTTCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCATAGATAC-ACAGTGGGTAGTGGGGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACTGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 GQ344810-Chardonnay-USA' -AACCGGTC--TTGACAACTTTTATCCAGACC-CGGTTATCGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGCGATGTGGCCAGTTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-AGCCTGTG-GAGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGATTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTAGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCATAGATAC-ACAGTGGGTAGTGGGGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACTGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 GQ344811-Chardonnay-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 GQ344812-Lemberger-USA' -AACCGGTC--TTGACAACTTTTATCCAGACC-CGGTTATCGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGCGATGTGGCCAGTTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGATTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTAGATTTTCAGCCGGTGGTAATTTTTCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCATAGATAC-ACAGTGGGTAGTGGGGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACTGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 GQ344813-Lemberger-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCCTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 GQ344814-Lemberger-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCCTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 GQ344815-Merlot-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGGTGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGATGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 GQ344816-Merlot-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCCTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 GQ344817-Merlot-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 GQ344818-Merlot-USA' -AACCGGTC--TTGACAACTTTTATCCAGACC-CTGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGACGTGGCCAATTTGCCGCAGATATC--TAAAGTTGTGT--TCGACAATACTGATTTTAGGCGTTCAGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGACTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTAGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAGTAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAAAAGAGACCGACGTAGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 GQ344819-Syrah-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 GQ344820-Syrah-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 GQ344821-Syrah-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 GQ344823-Chardonnay-USA' -AACCGGTC--TTGACAACTTTTATCCAGACC-CGGTTATCGCTGTTATGATTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGCGATGTGGCCAGTTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-AGCCTGTG-GAGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGATTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTAGATTTTCAGCCGGTGGTAATTTTTCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCATAGATAC-ACAGTGGGTAGTGGGGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACTGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 GQ344824-Chardonnay-USA' -AACCGGTC--TTGACAACTTTTATCCAGACC-CGGTTATCGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGCGATGTGGCCAGTTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-AGCCTGTG-GAGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGATTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTAGATTTTCAGCCGGTGGTAATTTTTCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCATAGATAC-ACAGTGGGTAGTGGGGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACTGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 GQ344825-Chardonnay-USA' -GACCGGTC--TTGACAACTTTTATCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCGAGTGCTCTAGCTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-AGCCTGTG-GAGCTAAGGTTTACTGTGATATTTTGGCTG-GCAATAGTGG--GCTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTGATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAT-ACAGTGGGTGGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTGTCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 GQ344827-Cabernet Sauvignon-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 GQ344828-Cabernet Sauvignon-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 GQ352631-Cabernet Sauvignon-South Africa' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTAGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 GQ352632-Ruby Cabernet-South Africa' ---------AGCTGGTAGTGTTTACGTTGA----AACCCAAATTTTCGTACCTGTAGGTAGCAGTACT-TATTTAATTGGTAAAGCAGCGGGGAAAGCTTATCGCGACGGTG--TAGAGGGAAGG--TTGT--ATGTTAACCCGAAAAGGTGGGTAGGTGTGAC-GAGGGATAACGTCGAACGTTACGTTGAGAA-ATTAAAACCC--ACATACACCGTAAAGATAG--ACAGCGGAGGCGCCTTATTAATCGGAGGTTTAGGTTCCGGACCGGACACCTTATTGAGGGTC--GTTGACGTGATATGTTTATTCTTGAGA-GCCTTGATACTGGAGTGCGAAAGGTATACGTCTA--CTACGGTTACAGCCGCAGTT---GTAACGGTACCGGCTGATTATAACTCCTTTAAACGAAGCTTCGTTGTTGAG-GCACTGAAAGGTCTTGGTA-TACCGGTTAGAGGTGTTGTTA-ACGAACCGAC 'Grapevine leafroll-associated virus 3 GQ478313-Otilia-China' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGGCACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAA-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 GU983863-Merlot-USA' -AACTGGTC--TCGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 HE794022-Kekfrankos-Hungary' -AACCGGTC--TTGACAACTTTTATCCAGACC-CTGTTATTTCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCCAATTTGCCGCAGATATC--TAAGGTTGTGT--TCGACAATACTGATTTTAGGTGTTCGGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGACTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTGGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACATTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAAAAGAGACCGACGTAGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 HE794023-Kakfrankos-Hungary' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTACCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 HE794024-Keknyelu-Hungary' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 HE794025-Olaszrizling-Hungary' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGCTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCGG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGCAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACTTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 HM059040-Isabel-Brazil' ---------AGCTGGTAGTGTTTACGTTGA----AACCCAAATTTTCGTACCTGTAGGTAGCAGTACT-TATTTAATTGGTAAAGCAGCGGGGAAAGCTTATCGCGACGGTG--TAGAGGGAAGG--TTGT--ATGTTAACCCGAAAAGGTGGGTAGGTGTGAC-GAGGGATAACGTCGGACGTTACGTTGAGAA-ATTAAAACCC--ACATACACCGTAAAGATAG--ACAGCGGAGGCGCCTTATTAATCGGAGGTTTAGGTTCCGGACCGGACACCTTATTGAGGGTC--GTTGACGTGATATGTTTATTCTTGAGA-GCCTTGATACTGGAGTGCGAAAGGTATACGTCTA--CTACGGTTACAGCCGCAGTC---GTAACGGTACCGGCTGATTATAACTCCTTTAAACGAAGCTTCGTTGTTGAG-GCACTGAAAGGTCTTGGTA-TACCGGTTAGAGGTGTTGTTA-ACGAACCGAC 'Grapevine leafroll-associated virus 3 HM245755-Unknown-Turkey' ---CCGGCCGCCCGGCGCCGCGCAGACGGGCCGCGGTAGAAAACACAAGGGCGTGTGGAAGAATTCTGCTAGCCGGGGCAACATATGTTGTGGCCGGTTTAACACATATATC--TCAGGGTGTGA--TCAACAATACTGATTTTAGGTGTTCGGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGACTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTAGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAAAAGAGACCGACGTAGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 HM245756-Unknown-Turkey' --AGGGGGA----GAAGGGGTCTGGCGGCGGGGGGGCGCGCGGGGGGGGAAGGGAGAGGGAAAAAAAGATAGTGTTGGT--GGAACATTTCGCTTGGCCTGTGGAACTTTTCGCTAGGTTGGTGAAATCATTCGGTTGGGTTTTCGATGTTCGGG-TGCCGGGG-CATAAAGGATCTAGTGTGATATTCTTGCCG-GTTCGAACCGGTACTGAAACTGATCATAGCG--TTGCCGAGGTTCC--TCATGGACGGGCCGTTGCTCTTACGATCTGTGGTAATTTTCACAACA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTAGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAAAAGAGACCGACGTAGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 HM636872-Red Globe-Chile' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 HM636873-Red Globe-Chile' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 HM636874-Flame seedless-Chile' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 HM636875-Perlette-Chile' -AACCGGTC--TTGACAACTTTTATCCAGACC-CTGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCCAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAATACCGATTTTAGGTGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCACAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTAGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 HM636876-Prime-Chile' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATCGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 HM636877-Crimson seedless-Chile' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 HM636878-Thompson seedless-Chile' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATTTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 HM636879-Crimson seedless-Chile' AAACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTAGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAA- 'Grapevine leafroll-associated virus 3 JN859074-Cabernet Sauvignon-India' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 JX220899-Pinot noir-New Zealand' -GACGGGTT--TAAGCAATTTCTATCCGGATC-CAGTTATAGCTGTGATGACCGGCGGTTCGAGCGCTCTCTCAAGGGTACGTAAAGATGTGGCGGCATTGCCTCAAATATC--TAAGGTCGTGT--ATGACAGTAACGACTTCAGATGTTCGGT-GGCGTGTG-GGGCGAAGGTTTATTGTGATATCTTAGCGG-GTAGTAGTAG--TTTGCGACTAGTAGACACC--TTAACCAATACGC--TCACGGATGAAGTTTCTGATTTTACGCCTGTGGTGATTTTCCCGAAG--GGTAGTCCTATAC-CGTGCACTTATAC-ACACACGTAT-GATGTGTCGGGTGGTGATGTTAT--TTATGGT-ATTTTTGAAG-----GTGAGAATAATAG--------GGCCTTTTTGAACGAACCGACTTTCCGTGGCATATCTAAGCACAGGGGAG-AACCTAAAGAAAAGGATGTGGCACAGTTCAGT 'Grapevine leafroll-associated virus 3 JX220900-Syrah-New Zealand' -GACGGGTT--TAAGCAATTTCTACCCTGATC-CAGTTATCGCCGTTATGACTGGTGGTTCGAGTGCTCTCTCGAAAGTGCGTAAAGACGTGGCGGCGTTACCTCAGATATC--TAAGGTGGTGT--TTGACAGCTCTGATTTTAGATGTTCTGT-AGCGTGCG-GTGCGAAAGTTTACTGTGATATTTTAGCCG-GTAGTAGCGA--TCTACGACTTGTAGACACT--TTGACAAACACAC--TTACGGATGAGGTGTCAGACTTTACGCCAGTCGTGATTTTCCCGAAG--GGTAGTCCAATAC-CCTGTTCTTATAC-GCACACGTAC-GACGTGCATGGTGGCGACGTCGT--TTATGGT-ATATTTGAGG-----GAGAGTACAATAG--------GGCCTTTTTGAATGAACCAACTTTCCGCGGTTTGTCGACGCACAGAGGAG-ATCCTAAAGAAAAGGACGTAGCTCAGTTTAAT 'Grapevine leafroll-associated virus 3 JX559645-Unknown-Canada' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KC113195-Concord-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KC113196-Concord-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTTAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCGGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KC113197-Concord-USA' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTTAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCGGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KC953908-Mencia-Spain' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KC953909-Unknown-Spain' -AACCGGTC--TTGACAACTTTTATCCAGACC-CTGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCCAATTTGCCGCAGATATC--TAAGGTTGTGT--TCGACAATACTGATTTTAGGTGTTCGGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGACTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTAGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAAAAGAGACCGACGTAGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 KC953910-Tempranillo-Spain' -GACTGGTC--TCGATAACTTTTATCCAGACC-CGGTTATTGCCGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGAAGTGATGTGGCTAATTTGCCGCAGATATC--TAAAGTTGTGT--TCGATAGTACCGATTTTAGATGTTCAGT-GGCCTGTG-GAGCTAAAGTTTACTGCGACATTCTGGCGG-GTAATAGTGG--ACTGAGACTGGTGGACACT--TTAACGAACACGC--TAACGGACGAAGTGACGGATTTTCAACCGGTGGTGATTTTCCCGAAA--GGCAGTCCAATAC-CCTGCTCATACAC-TCATAGGTAC-ACGGTGAGCGGTGATGAAGTGGT--ATATGGT-ATATTTGAAG-----GGGAGAATAATAG--------AGCTTTTCTAAATGAACCGACATTCCGGGGTGTATCGAAACGTAGGGGAG-AACCAAAAGAAAGTGATGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KC953911-Albarino-Spain' -AACTGGTC--TTGACAACTTTTATCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KC953912-Mencia-Spain' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-AACCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KC953913-Caino Tinto-Spain' -AACCGGTC--TTGACAACTTTTATCCAGACC-CTGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTTAGGAGTGATGTGGCCAATTTGCCGCAGATATC--TAAGGTTGTGT--TCGACAATACTGATTTTAGGTGTTCGGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGACTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTAGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAAAAGAGACCGACGTAGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 KC953914-Albarino-Spain' -AACTGGTC--TTGACAACTTTTATCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 KC953915-Caino Tinto-Spain' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KC953916-Mencia-Spain' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KC953917-Brancellao-Spain' -AACTGGTC--TTGACAACTTTTATCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCACAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 KC953918-Tempranillo-Spain' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KC953919-Tempranillo-Spain' -AACCGGTC--TTGACAACTTTTATCCAGACC-CTGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCCAATTTGCCGCAGATATC--TAAGGTTGTGT--TCGACAATACTGATTTTAGGTGTTCGGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGACTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTAGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAAAAGAGACCGACGTAGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 KC953920-Mencia-Spain' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KC953921-Mencia-Spain' -AACTGGTC--TGTACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KC953922-Tempranillo-Spain' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KC953923-Mencia-Spain' -AACCGGTC--TTGACAACTTTTATCCAGACC-CTGTTATTGCAGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCCAATTTGCCGCAGATATC--TAAGGTTGTGT--TCGACAATACTGATTTTAGGTGTTCGGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGACTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTAGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAAAAGAGACCGACGTAGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 KC953924-Retinto-Spain' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCGAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KC953925-Tempranillo-Spain' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KC953926-Albarino-Spain' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KC953927-Mencia-Spain' -AACCGGTC--TTGACAACTTTTATCCAGACC-CTGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCCAATTTGCCGCAGATATC--TAAGGTTGTGT--TCGACAATACTGATTTTAGGTGTTCGGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGACTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTGGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAAAAGAGACCGACGTAGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 KC953928-Albarino-Spain' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KC953929-Albarino-Spain' -GACTGGTC--TCGATAACTTTTATCCAGACC-CGGTTATTGCCGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGAAGTGATGTGGCTAATTCGCCGCAGATATC--TAAAGTTGTGT--TCGATAGTGCCGATTTTAGATGTTCAGT-GGCCTGTG-GAGCTAAGGTTTACTGCGACATTCTGGCGG-GTAATAGTGG--ACTGAGACTGGTGGACACT--TTAACGAACACGC--TAACGGACGAAGTGACGGATTTTCAACCGGTGGTGATTTTCCCGAAA--GGCAGTCCAATAC-CCTGCTCATACAC-TCATAGGTTC-ACGGTGAGCGGTGATGAAGTGGT--ATATGGT-ATATTTGAAG-----GGGAGAATAATAG--------AGCTTTTCTAAATGAACCGACATTCCGGGGCGTATCGAAACGTAGGGGAG-AACCAAAAGAAAGTGATGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KC953930-Mencia-Spain' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KC953931-Retinto-Spain' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KC953932-Mencia-Spain' -AACCGGTC--TTGACAACTTTTATCCAGACC-CTGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCCAATTTGCCGCAGATATC--TAAGGTTGTGT--TCGACAATACTGATTTTAGGTGTTCGGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGACTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTGGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAAAAGAGACCGACGTAGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 KC953933-Albarino-Spain' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACAAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KC953934-Brancellao-Spain' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KC953935-Brancellao-Spain' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCGAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KC953936-Mencia-Spain' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KC953937-Albarino-Spain' -GACTGGTC--TCGATAACTTTTATCCAGACC-CGGTTATTGCCGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGAAGTGATGTGGCTAATTCGCCGCAGATATC--TAAAGTTGTGT--TCGATAGTGCCGATTTTAGATGTTCAGT-GGCCTGTG-GAGCTAAGGTTTACTGCGACATTCTGGCGG-GTAATAGTGG--ACTGAGACTGGTGGACACT--TTAACGAACACGC--TAACGGACGAAGTGACGGATTTTCAACCGGTGGTGATTTTCCCGAAA--GGCAGTCCAATAC-CCTGCTCATACAC-TCATAGGTTC-ACGGTGAGCGGTGATGAAGTGGT--ATATGGT-ATATTTGAAG-----GGGAGAATAATAG--------AGCTTTTCTAAATGAACCGACATTCCGGGGCGTATCGAAACGTAGGGGAG-AACCAAAAGAAAGTGATGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KF029728-Unknown-Poland' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTACCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KF029729-Unknown-Poland' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTACCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KF029730-Unknown-Poland' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTACCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KF029731-Unknown-Poland' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KF029732-Unknown-Poland' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KF417599-Vidal blanc-USA *' -AACCGGTC--TTGACAACTTTTATCCAGACC-CTGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCCAATTTGCCGCAGATATC--TAAGGTTGTGT--TCGACAATACTGATTTTAGGTGTTCGGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGACTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTGGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAGTAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAAAAGAGACCGACGTAGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 KF417600-Vidal blanc-USA *' -AACCGGTC--TTGACAACTTTTATCCAGACC-CTGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCCAATTTGCCGCAGATATC--TAAGGTTGTGT--TCGACAATACTGATTTTAGGTGTTCGGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGACTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACTGTGGGTGGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAAAAGAGACCGACGTAGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 KF417601-Traminette-USA *' -AACCGGTC--TTGACAACTTTTATCCAGACC-CTGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCCAATTTGCCGCAGATATC--TAAGGTTGTGT--TCGACAATACTGATTTTAGGTGTTCGGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGACTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTGGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAAAAGAGACCGACGTAGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 KF417602-Sangiovese-USA *' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KF417603-Cabernet Sauvignon-USA *' -AACCGGTC--TTGACAACTTTTATCCAGACC-CTGTTATTGCCGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCCAATTTGCCGCAGATATC--TAAGGTTGTGT--TCGACAATACTGATTTTAGGTGTTCGGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGACTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTAGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAAAAGAGACCGACGTAGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 KF417604-Chancellor-USA *' -AACCGGTC--TTGACAACTTTTATCCAGACC-CTGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCCAATTTGCCGCAGATATC--TAAGGTTGTGT--TCGACAATACTGATTTTAGGTGTTCGGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGACTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTAGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAAAAGAGACCGACGTAGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 KF417605-Chardonnay-USA *' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ATCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KF417606-Chardonnay-USA *' -AACCGGTC--TTGACAACTTTTATCCAGACC-CTGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCCAATTTGCCGCAGATATC--TAAGGTTGTGT--TCGACAATACTGATTTTAGGTGTTCGGT-AGCCTGTG-GGGCTAAGGTTTACTGTGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTGACGAATACGC--TAACGGACGAGGTGGTGGACTTTCAACCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATACAC-TCACAGATAC-ACAGTGGGTAGTGGAGATGTGGT--GTACGGT-ATATTTGAAG-----GGGAGAATAACAG--------GGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAAAAGAGACCGACGTAGCGCAATTTAAT 'Grapevine leafroll-associated virus 3 KF417607-Rkatsiteli-USA *' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGTGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KF417608-Chardonnay-USA *' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Grapevine leafroll-associated virus 3 KF417609-Syrah-USA *' -AACTGGTC--TTGACAACTTTTACCCAGACC-CGGTTATTGCTGTTATGACTGGGGGGTCAAGTGCTCTAGTTAAGGTCAGGAGTGATGTGGCTAATTTGCCGCAGATATC--TAAGGTCGTGT--TCGACAGTACCGATTTTAGATGTTCGGT-GGCTTGTG-GGGCTAAGGTTTACTGCGATATTTTGGCAG-GTAATAGCGG--ACTGAGACTGGTGGACACT--TTAACGAATACGC--TAACGGACGAGGTAGTGGATTTTCAGCCGGTGGTAATTTTCCCGAAA--GGTAGTCCAATAC-CCTGTTCATATAC-TCATAGATAC-ACAGTGGGTGGTGGAGATGTGGT--ATACGGT-ATATTTGAAG-----GGGAGAATAACAG--------AGCTTTTCTAAATGAACCGACGTTCCGGGGCGTATCGAAACGTAGGGGAG-ACCCAGTAGAGACCGACGTGGCGCAGTTTAAT 'Pineapple mealybug wilt-associated virus 2 EU016675-PMWaV-2 Outgroup' --AACGGATATCATATCCCTTTTTTCTAAAGCACTTATAAAGGAAGCGGAACAGTCTACTGGACTACGCGTAACGGGTGCGGTGGTAACGGTACCAGCCGACTACAACTCTTTTAAACGTAGTTT--TATAACTAACTGCATGAAAGACTTGGGTATTCCAGTAAGGGCTATAGTAAATGAACCGACCGCTGCAGCGTTATATTCTTTATCTATATTACAAGAAAAGGATTTATTTCTGTCTGTTTTTGACTTTGGTGGAGGGACGTTTGATGTGTCTTTTGTTAGAAAACTCGGAGATGTGGTATGCGTACTGTTTAGCGTTGGCGATAACTTTTTAGGGGGAAGGGATATCGACAGGGCGGTAGCAGCTGAGGTGAAGGCAAGAGTGGGCGAATCTATTGATACAGCTACATTGTCATTATTTGCAGCGTCCATTAAAGAGGAGGTGACTAATGAGCCGAGGGCAAAGACGCACGTAGTAAA ; END; BEGIN TREES; TITLE 'Grapevine leafroll-associated virus 3 HSP70h ML analysis tree'; LINK TAXA = Taxa2; TRANSLATE 1 'Grapevine leafroll-associated virus 3 AJ748519-Unknown-Italy', 2 'Grapevine leafroll-associated virus 3 AJ748520-Unknown-Italy', 3 'Grapevine leafroll-associated virus 3 KC953929-Albarino-Spain', 4 'Grapevine leafroll-associated virus 3 KC953937-Albarino-Spain', 5 'Grapevine leafroll-associated virus 3 KC953910-Tempranillo-Spain', 6 'Grapevine leafroll-associated virus 3 FJ195749-Cabernet franc-USA', 7 'Grapevine leafroll-associated virus 3 AJ748516-Unknown-Syria', 8 'Grapevine leafroll-associated virus 3 GQ344818-Merlot-USA', 9 'Grapevine leafroll-associated virus 3 FJ883763-Chardonnay-USA', 10 'Grapevine leafroll-associated virus 3 FJ883764-Chardonnay-USA', 11 'Grapevine leafroll-associated virus 3 KF417604-Chancellor-USA *', 12 'Grapevine leafroll-associated virus 3 KF417606-Chardonnay-USA *', 13 'Grapevine leafroll-associated virus 3 KC953919-Tempranillo-Spain', 14 'Grapevine leafroll-associated virus 3 KC953909-Unknown-Spain', 15 'Grapevine leafroll-associated virus 3 FJ195747-Riesling-USA', 16 'Grapevine leafroll-associated virus 3 KC953913-Caino Tinto-Spain', 17 'Grapevine leafroll-associated virus 3 FJ883767-Lemberger-USA', 18 'Grapevine leafroll-associated virus 3 FJ883768-Chardonnay-USA', 19 'Grapevine leafroll-associated virus 3 KC953923-Mencia-Spain', 20 'Grapevine leafroll-associated virus 3 KF417603-Cabernet Sauvignon-USA *', 21 'Grapevine leafroll-associated virus 3 KC953932-Mencia-Spain', 22 'Grapevine leafroll-associated virus 3 KF417601-Traminette-USA *', 23 'Grapevine leafroll-associated virus 3 KC953927-Mencia-Spain', 24 'Grapevine leafroll-associated virus 3 KF417599-Vidal blanc-USA *', 25 'Grapevine leafroll-associated virus 3 KF417600-Vidal blanc-USA *', 26 'Grapevine leafroll-associated virus 3 HE794022-Kekfrankos-Hungary', 27 'Grapevine leafroll-associated virus 3 AJ748513-Unknown-Austria', 28 'Grapevine leafroll-associated virus 3 FJ883769-GR7-USA', 29 'Grapevine leafroll-associated virus 3 FJ195748-Merlot-USA', 30 'Grapevine leafroll-associated virus 3 AJ748510-Unknown-Austria', 31 'Grapevine leafroll-associated virus 3 FJ883765-Lemberger-USA', 32 'Grapevine leafroll-associated virus 3 AF037268-isolate NY-1-USA', 33 'Grapevine leafroll-associated virus 3 FJ883766-Chardonnay-USA', 34 'Grapevine leafroll-associated virus 3 FJ883761-Lemberger-USA', 35 'Grapevine leafroll-associated virus 3 AJ748514-Unknown-China', 36 'Grapevine leafroll-associated virus 3 DQ780888-Unknown-USA', 37 'Grapevine leafroll-associated virus 3 GQ344811-Chardonnay-USA', 38 'Grapevine leafroll-associated virus 3 JN859074-Cabernet Sauvignon-India', 39 'Grapevine leafroll-associated virus 3 KC953915-Caino Tinto-Spain', 40 'Grapevine leafroll-associated virus 3 KC953925-Tempranillo-Spain', 41 'Grapevine leafroll-associated virus 3 AJ748517-Unknown-Syria', 42 'Grapevine leafroll-associated virus 3 EU344893-Merlot-Chile', 43 'Grapevine leafroll-associated virus 3 DQ780890-Unknown-USA', 44 'Grapevine leafroll-associated virus 3 KF029732-Unknown-Poland', 45 'Grapevine leafroll-associated virus 3 KC953936-Mencia-Spain', 46 'Grapevine leafroll-associated virus 3 KC953930-Mencia-Spain', 47 'Grapevine leafroll-associated virus 3 AJ748518-Unknown-Italy', 48 'Grapevine leafroll-associated virus 3 KF417607-Rkatsiteli-USA *', 49 'Grapevine leafroll-associated virus 3 KF417602-Sangiovese-USA *', 50 'Grapevine leafroll-associated virus 3 HM636872-Red Globe-Chile', 51 'Grapevine leafroll-associated virus 3 KC953920-Mencia-Spain', 52 'Grapevine leafroll-associated virus 3 KC953908-Mencia-Spain', 53 'Grapevine leafroll-associated virus 3 AJ748512-Unknown-Austria', 54 'Grapevine leafroll-associated virus 3 HM636878-Thompson seedless-Chile', 55 'Grapevine leafroll-associated virus 3 AJ748524-Unknown-Israel', 56 'Grapevine leafroll-associated virus 3 HM636874-Flame seedless-Chile', 57 'Grapevine leafroll-associated virus 3 GQ344828-Cabernet Sauvignon-USA', 58 'Grapevine leafroll-associated virus 3 KC953928-Albarino-Spain', 59 'Grapevine leafroll-associated virus 3 AJ748515-Unknown-Syria', 60 'Grapevine leafroll-associated virus 3 HE794023-Kakfrankos-Hungary', 61 'Grapevine leafroll-associated virus 3 GQ344807-Cabernet Sauvignon-USA', 62 'Grapevine leafroll-associated virus 3 GQ344817-Merlot-USA', 63 'Grapevine leafroll-associated virus 3 GQ344827-Cabernet Sauvignon-USA', 64 'Grapevine leafroll-associated virus 3 KC953926-Albarino-Spain', 65 'Grapevine leafroll-associated virus 3 AJ748523-Unknown-USA', 66 'Grapevine leafroll-associated virus 3 KF417609-Syrah-USA *', 67 'Grapevine leafroll-associated virus 3 GQ344819-Syrah-USA', 68 'Grapevine leafroll-associated virus 3 HM636877-Crimson seedless-Chile', 69 'Grapevine leafroll-associated virus 3 KC953934-Brancellao-Spain', 70 'Grapevine leafroll-associated virus 3 FJ883760-Lamberger-USA', 71 'Grapevine leafroll-associated virus 3 KC953933-Albarino-Spain', 72 'Grapevine leafroll-associated virus 3 GQ344821-Syrah-USA', 73 'Grapevine leafroll-associated virus 3 HM636873-Red Globe-Chile', 74 'Grapevine leafroll-associated virus 3 KC113195-Concord-USA', 75 'Grapevine leafroll-associated virus 3 KC953918-Tempranillo-Spain', 76 'Grapevine leafroll-associated virus 3 GQ344814-Lemberger-USA', 77 'Grapevine leafroll-associated virus 3 GQ344816-Merlot-USA', 78 'Grapevine leafroll-associated virus 3 GQ344813-Lemberger-USA', 79 'Grapevine leafroll-associated virus 3 KF417608-Chardonnay-USA *', 80 'Grapevine leafroll-associated virus 3 GQ344820-Syrah-USA', 81 'Grapevine leafroll-associated virus 3 KC953922-Tempranillo-Spain', 82 'Grapevine leafroll-associated virus 3 JX559645-Unknown-Canada', 83 'Grapevine leafroll-associated virus 3 HE794024-Keknyelu-Hungary', 84 'Grapevine leafroll-associated virus 3 KF029728-Unknown-Poland', 85 'Grapevine leafroll-associated virus 3 KF029729-Unknown-Poland', 86 'Grapevine leafroll-associated virus 3 KF029730-Unknown-Poland', 87 'Grapevine leafroll-associated virus 3 AJ748521-Unknown-Italy', 88 'Grapevine leafroll-associated virus 3 KF029731-Unknown-Poland', 89 'Grapevine leafroll-associated virus 3 KC953916-Mencia-Spain', 90 'Grapevine leafroll-associated virus 3 KC953931-Retinto-Spain', 91 'Grapevine leafroll-associated virus 3 GQ478313-Otilia-China', 92 'Grapevine leafroll-associated virus 3 HM636879-Crimson seedless-Chile', 93 'Grapevine leafroll-associated virus 3 FJ195745-Cabernet franc-USA', 94 'Grapevine leafroll-associated virus 3 FJ195746-Chardonnay-USA', 95 'Grapevine leafroll-associated virus 3 KC113196-Concord-USA', 96 'Grapevine leafroll-associated virus 3 KC113197-Concord-USA', 97 'Grapevine leafroll-associated virus 3 DQ780885-Unknown-USA', 98 'Grapevine leafroll-associated virus 3 KC953912-Mencia-Spain', 99 'Grapevine leafroll-associated virus 3 KF417605-Chardonnay-USA *', 100 'Grapevine leafroll-associated virus 3 DQ780891-Unknown-USA', 101 'Grapevine leafroll-associated virus 3 GQ246623-Zi tao-China', 102 'Grapevine leafroll-associated virus 3 DQ780886-Unknown-USA', 103 'Grapevine leafroll-associated virus 3 GU983863-Merlot-USA', 104 'Grapevine leafroll-associated virus 3 KC953921-Mencia-Spain', 105 'Grapevine leafroll-associated virus 3 HM636876-Prime-Chile', 106 'Grapevine leafroll-associated virus 3 KC953924-Retinto-Spain', 107 'Grapevine leafroll-associated virus 3 KC953935-Brancellao-Spain', 108 'Grapevine leafroll-associated virus 3 HE794025-Olaszrizling-Hungary', 109 'Grapevine leafroll-associated virus 3 GQ352631-Cabernet Sauvignon-South Africa', 110 'Grapevine leafroll-associated virus 3 DQ780887-Unknown-USA', 111 'Grapevine leafroll-associated virus 3 GQ344815-Merlot-USA', 112 'Grapevine leafroll-associated virus 3 FJ883762-Lemberger-USA', 113 'Grapevine leafroll-associated virus 3 KC953911-Albarino-Spain', 114 'Grapevine leafroll-associated virus 3 KC953914-Albarino-Spain', 115 'Grapevine leafroll-associated virus 3 KC953917-Brancellao-Spain', 116 'Grapevine leafroll-associated virus 3 AJ748511-Unknown-Austria', 117 'Grapevine leafroll-associated virus 3 HM636875-Perlette-Chile', 118 'Grapevine leafroll-associated virus 3 AJ748522-Unknown-Tunisia', 119 'Grapevine leafroll-associated virus 3 GQ344810-Chardonnay-USA', 120 'Grapevine leafroll-associated virus 3 GQ344809-Cabernet Sauvignon-USA', 121 'Grapevine leafroll-associated virus 3 GQ344824-Chardonnay-USA', 122 'Grapevine leafroll-associated virus 3 GQ344808-Cabernet Sauvignon-USA', 123 'Grapevine leafroll-associated virus 3 GQ344823-Chardonnay-USA', 124 'Grapevine leafroll-associated virus 3 GQ344812-Lemberger-USA', 125 'Grapevine leafroll-associated virus 3 DQ780889-Unknown-USA', 126 'Grapevine leafroll-associated virus 3 GQ344825-Chardonnay-USA', 127 'Grapevine leafroll-associated virus 3 JX220899-Pinot noir-New Zealand', 128 'Grapevine leafroll-associated virus 3 JX220900-Syrah-New Zealand', 129 'Grapevine leafroll-associated virus 3 HM245755-Unknown-Turkey', 130 'Grapevine leafroll-associated virus 3 HM245756-Unknown-Turkey', 131 'Grapevine leafroll-associated virus 3 GQ352632-Ruby Cabernet-South Africa', 132 'Grapevine leafroll-associated virus 3 HM059040-Isabel-Brazil', 133 'Grapevine leafroll-associated virus 3 EU259806-Unknown-South Africa', 134 'Pineapple mealybug wilt-associated virus 2 EU016675-PMWaV-2 Outgroup'; TREE Imported_tree_0 = [&R] (((93,94,89,72,52,37,57,48,79,74,104,53,38,58,54,80,65,75,56,35,50,70,88,(95,96,97)0.8880,43,62,82,42,103,49,69,87,108,112,47,36,68,60,61,40,55,73,41,90,46,67,83,91,45,66,92,44,64,71,39,59,76,77,78,51,63,84,85,86,81,105,100,101,102,106,107,109,34,32,33,((125,126)0.9850,((127,128)0.9990,(6,(1,2,5,(3,4)0.9600)0.7480)0.9810)0.8670)0.7030,98,99,111,110,113,114,115,116,117,31,30,(29,28,25,26,23,22,21,9,10,8,24,11,12,13,14,15,16,27,17,18,19,20,7,(129,130)0.9970)0.7000,(124,119,118,120,121,122,123)0.9650)0.9980,(133,(131,132)0.9300)1.0000),134); END; BEGIN TREES; TITLE 'Grapevine leafroll-associated virus 2 HSP70h ML analysis tree'; LINK TAXA = Taxa1; TRANSLATE 1 'Grapevine leafroll-associated virus 2 EF123029-Arinto-Unknown', 2 'Grapevine leafroll-associated virus 2 JQ771955-Pinot noir-USA', 3 'Grapevine leafroll-associated virus 2 KF417612-Lenoir-USA', 4 'Grapevine leafroll-associated virus 2 EU760775-Cabernet Sauvignon-USA', 5 'Grapevine leafroll-associated virus 2 JX559644-Unknown-Canada', 6 'Grapevine leafroll-associated virus 2 KF417616-Cabernet Sauvignon-USA *', 7 'Grapevine leafroll-associated virus 2 KF417613-Cabernet Sauvignon-USA *', 8 'Grapevine leafroll-associated virus 2 FJ436234-Unknown-USA', 9 'Grapevine leafroll-associated virus 2 GU457405-Pinot noir-USA', 10 'Grapevine leafroll-associated virus 2 EF123011-Chaouch rose-Unknown', 11 'Grapevine leafroll-associated virus 2 KF417620-Chardonnay-USA *', 12 'Grapevine leafroll-associated virus 2 KF417622-Vidal blanc-USA *', 13 'Grapevine leafroll-associated virus 2 KF417625-Vidal blanc-USA *', 14 'Grapevine leafroll-associated virus 2 KF417623-Vidal blanc-USA *', 15 'Grapevine leafroll-associated virus 2 KF417615-Vidal blanc-USA *', 16 'Grapevine leafroll-associated virus 2 HQ162309-Unknown-China', 17 'Grapevine leafroll-associated virus 2 KF417624-Cabernet Sauvignon-USA *', 18 'Grapevine leafroll-associated virus 2 KF417617-Seyval blanc-USA *', 19 'Grapevine leafroll-associated virus 2 AY881628-Unknown-South Africa', 20 'Grapevine leafroll-associated virus 2 EU760791-Cabernet Sauvignon-USA', 21 'Grapevine leafroll-associated virus 2 EU760799-Cabernet Sauvignon-USA', 22 'Grapevine leafroll-associated virus 2 KF417618-Traminette-USA *', 23 'Grapevine leafroll-associated virus 2 KF417621-Sangiovese-USA *', 24 'Grapevine leafroll-associated virus 2 KF417614-Vidal blanc-USA *', 25 'Grapevine leafroll-associated virus 2 KF417619-Cabernet Sauvignon-USA *', 26 'Grapevine leafroll-associated virus 2 EF123010-Plant de Treffor-Unknown', 27 'Beet yellows virus NC001598-BYV Outgroup'; TREE Imported_tree_0 = [&R] ((8,11,9,7,6,5,4,3,2,10,17,12,13,14,15,16,18,((20,21)0.9280,26,22,23,24,25)0.8010,1)0.7640,19,27); END; BEGIN TREES; TITLE Grapevine_fleck_virus_Replicase_ML_analysis_tree; LINK TAXA = Taxa3; TRANSLATE 1 'Grapevine fleck virus GU372367-Chardonnay-USA', 2 'Grapevine fleck virus GU372370-Chardonnay-USA', 3 'Grapevine fleck virus GU372369-Chardonnay-USA', 4 'Grapevine fleck virus GU372371-Chardonnay-USA', 5 'Grapevine fleck virus AJ309022-Unknown-Italy', 6 'Grapevine fleck virus GU372368-Chardonnay-USA', 7 'Grapevine fleck virus KF417610-Chancellor-USA *', 8 'Grapevine fleck virus KF417611-Albarino-USA *', 9 'Grapevine red globe virus AF521977-GRGV Outgroup'; TREE Imported_tree_0 = [&R] (((6,7)0.8050,5,8,4,(3,(1,2)0.7500)0.7070),9); END;