#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 25, 2024; 11:18 GMT TreeBASE (cc) 1994-2008 Study reference: Zink D., Schumann K., & Nagl W. 1994. Restriction fragment length polymorphisms of the phytohemagglutinin genes in Phaseolus and Vigna (Leguminosae). Plant Systematics and Evolution, 191: 131-146. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S16544] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=19; TAXLABELS Phaseolus_acutifolius__Pa_1 Phaseolus_coccineus_CvDe__Pc_2 Phaseolus_coccineus_cvBu_Pc_1 Phaseolus_coccineus_cvHDS_Pc_5 Phaseolus_coccineus_cvSt__Pc_3 Phaseolus_coccineus_cvWR__Pc_4 Phaseolus_lunatus_Var_lBL__Pl_1 Phaseolus_lunatus_Var_lFB__Pl_3 Phaseolus_lunatus_lunatus__Pl_2 Phaseolus_vulgaris_Var_vBl_Pv5 Phaseolus_vulgaris_Var_vCo_Pv3 Phaseolus_vulgaris_Var_vHM_Pv4 Phaseolus_vulgaris_Var_vKW_Pv6 Phaseolus_vulgaris_Var_vNe_Pv7 Phaseolus_vulgaris_Var_vTe_Pv2 Phaseolus_vulgaris_aborigineus_Pv_1 Vigna_angularis__Vi_1 Vigna_radiata__Vi_2 Vigna_unguiculata__Vi_3 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M24635] TITLE Phaseolus_Table_3; LINK TAXA = Taxa1; DIMENSIONS NCHAR=170; FORMAT DATATYPE=Standard SYMBOLS= "0 1" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170] [ . . . . . . . . . . . . . . . . .] Phaseolus_acutifolius__Pa_1 00001010100100011000010111000010001000010010100101010000000000000010000000000000000000111101010001000010010000011100110001000100010100011100000000111000000010001010100000 Phaseolus_coccineus_CvDe__Pc_2 01010110110011010000100101101000010110110001001100101101111011011000000101001011001011000110010100011111101100010011010000101011101011000111111110100100111101001100010101 Phaseolus_coccineus_cvBu_Pc_1 01010110110011010000100101101000010101101001001100101101111011011000000101001011001011000110010100011111101100010011010000101011101011000110111110100100111101001100010101 Phaseolus_coccineus_cvHDS_Pc_5 00101110110001010100100100001000010001010101000000010000001001100000100010000001101000100010010100011001001100100011010100000011100000000001100100110100110001001100000000 Phaseolus_coccineus_cvSt__Pc_3 00101110111001100100100101101000010101110101001100111111111011111000100110001011001011000110010100011111101100110011010100101011101011000111111110100100111101001100010101 Phaseolus_coccineus_cvWR__Pc_4 00101110111001100100100101101000010001010101000000011101111011101000100110001011101011100110010100011111101100110011010100101011101010000111101110100100111101001100010101 Phaseolus_lunatus_Var_lBL__Pl_1 00000011001000000011100000000100000000000000000010010010100000000100000000010000010000000100000010000000000000000010101000100100100000001000000000100010100101000000000000 Phaseolus_lunatus_Var_lFB__Pl_3 00000010001000000011000000000000000000000000000010100100000000000000000000110000000000000100000010000000000000000010101000100100000000000000000000100000100101000000000000 Phaseolus_lunatus_lunatus__Pl_2 00001001001000000011000000000000000000000000010010010000100000000000000000000000010000000100000010000000000000000010101000100100100000000000000000100010101000000000000000 Phaseolus_vulgaris_Var_vBl_Pv5 10000010001000000000000100010000000000000110001100000000000000100000000000000100001000000001001001000000000001010000000101000000000000000001000000000100000101010000000010 Phaseolus_vulgaris_Var_vCo_Pv3 01000011100000000100010010001000100000100000000010100000000000100000010000000100001000000000100100100000000001000010010110000000000000000000000000111000001100101001001010 Phaseolus_vulgaris_Var_vHM_Pv4 01000011100000000100010010001000100000100000000010100000000000100000010000000100001000000000100100100000000001000010010110000000000000000000000000111000001100101001001010 Phaseolus_vulgaris_Var_vKW_Pv6 10000010001000000000000100010000000000000110001100000000000000100000000000000100001000000001001001000000000001010000000101000000000000000001000000000100000101010000000010 Phaseolus_vulgaris_Var_vNe_Pv7 10000010001000000000000100010000000000000110001100000000000000100000000000000100001000000001001001000000000001010000000101000000000000000001000000000100000101010000000010 Phaseolus_vulgaris_Var_vTe_Pv2 01000011100000000100010010001000100000100000000010100000000000100000010000000100001000000000100100100000000001000010010110000000000000000000000000111000001100101001001010 Phaseolus_vulgaris_aborigineus_Pv_1 00000011000000000000000100000000000001000000000101000000000000000000000000000100000000100010000000000000000101000000000100000000000000000000000000000001000100000000000010 Vigna_angularis__Vi_1 00000000000000000000010100000000000000000000000010000000000000000000000000000000000010000000000000000000000000000000000000000100000000000000000001000000000000000000000000 Vigna_radiata__Vi_2 00000110000000000000010001000001100000000000000000000000000100000001000000000000000100000000101000000000000010000000000000010101000000001001000000000000000000100000000100 Vigna_unguiculata__Vi_3 00000010000000000000001101000010000000000000000000000000000000000000001000000000001000000000000000000000000000000000000000000100010000100000000000100000000001000000000000 ; END; BEGIN TREES; TITLE Phaseolus_Results; LINK TAXA = Taxa1; TRANSLATE 1 Phaseolus_vulgaris_aborigineus_Pv_1, 2 Phaseolus_vulgaris_Var_vTe_Pv2, 3 Phaseolus_vulgaris_Var_vCo_Pv3, 4 Phaseolus_vulgaris_Var_vHM_Pv4, 5 Phaseolus_vulgaris_Var_vBl_Pv5, 6 Phaseolus_vulgaris_Var_vKW_Pv6, 7 Phaseolus_vulgaris_Var_vNe_Pv7, 8 Phaseolus_coccineus_cvBu_Pc_1, 9 Phaseolus_coccineus_CvDe__Pc_2, 10 Phaseolus_coccineus_cvSt__Pc_3, 11 Phaseolus_coccineus_cvWR__Pc_4, 12 Phaseolus_coccineus_cvHDS_Pc_5, 13 Phaseolus_lunatus_Var_lBL__Pl_1, 14 Phaseolus_lunatus_lunatus__Pl_2, 15 Phaseolus_lunatus_Var_lFB__Pl_3, 16 Phaseolus_acutifolius__Pa_1, 17 Vigna_angularis__Vi_1, 18 Vigna_radiata__Vi_2, 19 Vigna_unguiculata__Vi_3; TREE Fig._5b = [&R] ((((((((((2,3),4),1),(5,(6,7))),(12,((8,9),(10,11)))),16),(15,(14,13))),18),19),17); TREE Fig._5a = [&R] (((((((((3,(4,2)),1),((6,5),7)),16),((((8,9),10),11),12)),(15,(13,14))),18),19),17); TREE Fig._4b = [&R] ((((((((6,5),7),(((2,3),4),1)),((((10,11),(9,8)),12),16)),((13,14),15)),19),18),17); TREE Fig._4a = [&R] ((((((((((8,9),10),11),12),(7,(6,5))),(1,(4,(3,2)))),(15,(14,13))),(19,16)),18),17); END;